Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041308.t1 | XP_024636633.1 | 69.6 | 737 | 38 | 8 | 1 | 552 | 1 | 736 | 1.10E-270 | 942.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041308.t1 | Q9SWG3 | 30.9 | 711 | 276 | 14 | 3 | 514 | 8 | 702 | 6.0e-84 | 313.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041308.t1 | A0A2K3NBU0 | 54.2 | 703 | 132 | 9 | 4 | 521 | 3 | 700 | 7.8e-194 | 686.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene041308.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041308.t1 | MTR_1g008290 | 62.857 | 140 | 43 | 2 | 94 | 227 | 8 | 144 | 3.55e-56 | 185 |
MS.gene041308.t1 | MTR_5g032260 | 56.075 | 107 | 41 | 1 | 68 | 168 | 299 | 405 | 7.22e-30 | 122 |
MS.gene041308.t1 | MTR_1g070355 | 26.459 | 257 | 162 | 8 | 14 | 251 | 47 | 295 | 3.74e-19 | 91.3 |
MS.gene041308.t1 | MTR_5g076070 | 25.726 | 241 | 148 | 9 | 25 | 242 | 33 | 265 | 6.92e-18 | 84.7 |
MS.gene041308.t1 | MTR_7g446520 | 24.643 | 280 | 169 | 7 | 13 | 266 | 56 | 319 | 3.44e-17 | 83.6 |
MS.gene041308.t1 | MTR_6g051425 | 21.834 | 229 | 154 | 4 | 43 | 251 | 19 | 242 | 1.45e-16 | 81.6 |
MS.gene041308.t1 | MTR_2g098880 | 34.259 | 108 | 65 | 1 | 40 | 141 | 60 | 167 | 2.17e-16 | 79.7 |
MS.gene041308.t1 | MTR_2g098880 | 32.231 | 121 | 76 | 1 | 40 | 154 | 72 | 192 | 2.54e-16 | 79.7 |
MS.gene041308.t1 | MTR_1g013060 | 28.696 | 230 | 145 | 7 | 20 | 231 | 1 | 229 | 1.15e-14 | 73.9 |
MS.gene041308.t1 | MTR_0402s0040 | 27.624 | 181 | 116 | 4 | 41 | 208 | 26 | 204 | 2.04e-14 | 76.3 |
MS.gene041308.t1 | MTR_4g067290 | 33.333 | 108 | 67 | 2 | 33 | 136 | 48 | 154 | 3.81e-12 | 66.6 |
MS.gene041308.t1 | MTR_4g067290 | 33.333 | 108 | 67 | 2 | 33 | 136 | 48 | 154 | 4.19e-12 | 66.6 |
MS.gene041308.t1 | MTR_4g067290 | 33.333 | 108 | 67 | 2 | 33 | 136 | 68 | 174 | 4.73e-12 | 66.6 |
MS.gene041308.t1 | MTR_4g067290 | 33.333 | 108 | 67 | 2 | 33 | 136 | 66 | 172 | 4.78e-12 | 66.6 |
MS.gene041308.t1 | MTR_4g067290 | 33.333 | 108 | 67 | 2 | 33 | 136 | 68 | 174 | 4.90e-12 | 66.6 |
MS.gene041308.t1 | MTR_7g446510 | 28.676 | 136 | 90 | 1 | 123 | 251 | 166 | 301 | 6.91e-12 | 67.4 |
MS.gene041308.t1 | MTR_4g067290 | 33.333 | 108 | 67 | 2 | 33 | 136 | 108 | 214 | 7.92e-12 | 66.6 |
MS.gene041308.t1 | MTR_7g446480 | 28.676 | 136 | 90 | 1 | 123 | 251 | 151 | 286 | 1.52e-11 | 66.2 |
MS.gene041308.t1 | MTR_3g006370 | 31.132 | 106 | 68 | 1 | 36 | 136 | 45 | 150 | 6.10e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041308.t1 | AT4G15090 | 41.985 | 262 | 128 | 5 | 3 | 244 | 8 | 265 | 2.42e-54 | 197 |
MS.gene041308.t1 | AT4G15090 | 41.525 | 236 | 126 | 3 | 279 | 514 | 479 | 702 | 2.42e-50 | 186 |
MS.gene041308.t1 | AT4G15090 | 41.985 | 262 | 128 | 5 | 3 | 244 | 8 | 265 | 2.42e-54 | 197 |
MS.gene041308.t1 | AT4G15090 | 41.525 | 236 | 126 | 3 | 279 | 514 | 479 | 702 | 2.42e-50 | 186 |
MS.gene041308.t1 | AT4G15090 | 41.985 | 262 | 128 | 5 | 3 | 244 | 8 | 265 | 2.42e-54 | 197 |
MS.gene041308.t1 | AT4G15090 | 41.525 | 236 | 126 | 3 | 279 | 514 | 479 | 702 | 2.42e-50 | 186 |
MS.gene041308.t1 | AT4G15090 | 41.985 | 262 | 128 | 5 | 3 | 244 | 8 | 265 | 2.42e-54 | 197 |
MS.gene041308.t1 | AT4G15090 | 41.525 | 236 | 126 | 3 | 279 | 514 | 479 | 702 | 2.42e-50 | 186 |
MS.gene041308.t1 | AT4G15090 | 41.985 | 262 | 128 | 5 | 3 | 244 | 8 | 265 | 2.42e-54 | 197 |
MS.gene041308.t1 | AT4G15090 | 41.525 | 236 | 126 | 3 | 279 | 514 | 479 | 702 | 2.42e-50 | 186 |
MS.gene041308.t1 | AT1G76320 | 46.597 | 191 | 98 | 3 | 279 | 468 | 416 | 603 | 6.99e-50 | 182 |
MS.gene041308.t1 | AT1G76320 | 43.961 | 207 | 104 | 3 | 45 | 244 | 1 | 202 | 2.81e-47 | 175 |
MS.gene041308.t1 | AT1G76320 | 44.845 | 194 | 104 | 2 | 279 | 472 | 416 | 606 | 7.13e-50 | 183 |
MS.gene041308.t1 | AT1G76320 | 43.961 | 207 | 104 | 3 | 45 | 244 | 1 | 202 | 3.87e-47 | 176 |
MS.gene041308.t1 | AT1G76320 | 44.845 | 194 | 104 | 2 | 279 | 472 | 416 | 606 | 7.41e-50 | 183 |
MS.gene041308.t1 | AT1G76320 | 43.961 | 207 | 104 | 3 | 45 | 244 | 1 | 202 | 3.94e-47 | 176 |
MS.gene041308.t1 | AT1G76320 | 44.845 | 194 | 104 | 2 | 279 | 472 | 416 | 606 | 7.41e-50 | 183 |
MS.gene041308.t1 | AT1G76320 | 43.961 | 207 | 104 | 3 | 45 | 244 | 1 | 202 | 3.94e-47 | 176 |
MS.gene041308.t1 | AT3G22170 | 45.833 | 192 | 102 | 1 | 279 | 470 | 488 | 677 | 1.11e-49 | 184 |
MS.gene041308.t1 | AT3G22170 | 39.216 | 255 | 114 | 4 | 14 | 243 | 35 | 273 | 6.31e-49 | 182 |
MS.gene041308.t1 | AT3G22170 | 45.833 | 192 | 102 | 1 | 279 | 470 | 488 | 677 | 1.11e-49 | 184 |
MS.gene041308.t1 | AT3G22170 | 39.216 | 255 | 114 | 4 | 14 | 243 | 35 | 273 | 6.31e-49 | 182 |
MS.gene041308.t1 | AT2G32250 | 38.071 | 197 | 121 | 1 | 280 | 476 | 424 | 619 | 7.68e-34 | 137 |
MS.gene041308.t1 | AT2G32250 | 39.574 | 235 | 95 | 7 | 44 | 265 | 41 | 241 | 1.00e-33 | 137 |
MS.gene041308.t1 | AT2G32250 | 38.071 | 197 | 121 | 1 | 280 | 476 | 424 | 619 | 7.68e-34 | 137 |
MS.gene041308.t1 | AT2G32250 | 39.574 | 235 | 95 | 7 | 44 | 265 | 41 | 241 | 1.00e-33 | 137 |
MS.gene041308.t1 | AT2G32250 | 38.071 | 197 | 121 | 1 | 280 | 476 | 383 | 578 | 8.51e-34 | 137 |
MS.gene041308.t1 | AT2G32250 | 39.316 | 234 | 95 | 7 | 45 | 265 | 1 | 200 | 6.51e-33 | 134 |
MS.gene041308.t1 | AT2G32250 | 38.071 | 197 | 121 | 1 | 280 | 476 | 424 | 619 | 8.61e-34 | 137 |
MS.gene041308.t1 | AT2G32250 | 39.574 | 235 | 95 | 7 | 44 | 265 | 41 | 241 | 1.01e-33 | 137 |
MS.gene041308.t1 | AT2G32250 | 38.071 | 197 | 121 | 1 | 280 | 476 | 424 | 619 | 8.61e-34 | 137 |
MS.gene041308.t1 | AT2G32250 | 39.574 | 235 | 95 | 7 | 44 | 265 | 41 | 241 | 1.01e-33 | 137 |
MS.gene041308.t1 | AT2G32250 | 38.071 | 197 | 121 | 1 | 280 | 476 | 424 | 619 | 8.61e-34 | 137 |
MS.gene041308.t1 | AT2G32250 | 39.574 | 235 | 95 | 7 | 44 | 265 | 41 | 241 | 1.01e-33 | 137 |
MS.gene041308.t1 | AT2G32250 | 39.574 | 235 | 95 | 7 | 44 | 265 | 41 | 241 | 8.79e-34 | 137 |
MS.gene041308.t1 | AT2G32250 | 38.071 | 197 | 121 | 1 | 280 | 476 | 424 | 619 | 1.03e-33 | 136 |
MS.gene041308.t1 | AT2G32250 | 38.071 | 197 | 121 | 1 | 280 | 476 | 383 | 578 | 9.04e-34 | 137 |
MS.gene041308.t1 | AT2G32250 | 39.316 | 234 | 95 | 7 | 45 | 265 | 1 | 200 | 6.14e-33 | 134 |
MS.gene041308.t1 | AT4G19990 | 41.714 | 175 | 100 | 1 | 291 | 463 | 382 | 556 | 2.62e-33 | 135 |
MS.gene041308.t1 | AT4G19990 | 30.256 | 195 | 82 | 5 | 78 | 251 | 1 | 162 | 1.84e-17 | 86.3 |
MS.gene041308.t1 | AT4G19990 | 41.714 | 175 | 100 | 1 | 291 | 463 | 439 | 613 | 2.77e-33 | 135 |
MS.gene041308.t1 | AT4G19990 | 34.335 | 233 | 99 | 5 | 40 | 251 | 20 | 219 | 6.32e-30 | 125 |
MS.gene041308.t1 | AT4G19990 | 41.714 | 175 | 100 | 1 | 291 | 463 | 439 | 613 | 2.77e-33 | 135 |
MS.gene041308.t1 | AT4G19990 | 34.335 | 233 | 99 | 5 | 40 | 251 | 20 | 219 | 6.32e-30 | 125 |
MS.gene041308.t1 | AT4G19990 | 41.714 | 175 | 100 | 1 | 291 | 463 | 439 | 613 | 3.11e-33 | 135 |
MS.gene041308.t1 | AT4G19990 | 34.335 | 233 | 99 | 5 | 40 | 251 | 20 | 219 | 7.03e-30 | 125 |
MS.gene041308.t1 | AT4G19990 | 41.714 | 175 | 100 | 1 | 291 | 463 | 453 | 627 | 3.35e-33 | 135 |
MS.gene041308.t1 | AT4G19990 | 31.618 | 272 | 123 | 7 | 1 | 251 | 4 | 233 | 5.98e-30 | 125 |
MS.gene041308.t1 | AT4G19990 | 41.714 | 175 | 100 | 1 | 291 | 463 | 439 | 613 | 3.57e-33 | 135 |
MS.gene041308.t1 | AT4G19990 | 34.335 | 233 | 99 | 5 | 40 | 251 | 20 | 219 | 7.74e-30 | 125 |
MS.gene041308.t1 | AT4G19990 | 41.714 | 175 | 100 | 1 | 291 | 463 | 439 | 613 | 3.57e-33 | 135 |
MS.gene041308.t1 | AT4G19990 | 34.335 | 233 | 99 | 5 | 40 | 251 | 20 | 219 | 7.74e-30 | 125 |
MS.gene041308.t1 | AT4G38180 | 33.790 | 219 | 130 | 3 | 40 | 244 | 72 | 289 | 3.91e-30 | 125 |
MS.gene041308.t1 | AT4G38180 | 32.178 | 202 | 127 | 3 | 280 | 476 | 504 | 700 | 1.19e-25 | 112 |
MS.gene041308.t1 | AT2G27110 | 35.204 | 196 | 117 | 3 | 282 | 471 | 306 | 497 | 4.29e-30 | 125 |
MS.gene041308.t1 | AT2G27110 | 35.417 | 192 | 122 | 2 | 282 | 471 | 451 | 642 | 4.34e-30 | 125 |
MS.gene041308.t1 | AT2G27110 | 27.907 | 215 | 123 | 6 | 37 | 243 | 45 | 235 | 3.93e-17 | 85.5 |
MS.gene041308.t1 | AT2G27110 | 35.417 | 192 | 122 | 2 | 282 | 471 | 451 | 642 | 4.34e-30 | 125 |
MS.gene041308.t1 | AT2G27110 | 27.907 | 215 | 123 | 6 | 37 | 243 | 45 | 235 | 3.93e-17 | 85.5 |
MS.gene041308.t1 | AT4G38170 | 35.263 | 190 | 114 | 5 | 282 | 465 | 271 | 457 | 6.04e-25 | 108 |
MS.gene041308.t1 | AT1G80010 | 32.727 | 220 | 129 | 5 | 41 | 244 | 95 | 311 | 5.31e-24 | 107 |
MS.gene041308.t1 | AT1G80010 | 32.768 | 177 | 108 | 4 | 296 | 465 | 542 | 714 | 4.02e-20 | 94.7 |
MS.gene041308.t1 | AT1G52520 | 29.482 | 251 | 164 | 4 | 2 | 242 | 38 | 285 | 5.54e-24 | 107 |
MS.gene041308.t1 | AT1G52520 | 32.222 | 180 | 112 | 3 | 298 | 467 | 519 | 698 | 5.47e-21 | 97.4 |
MS.gene041308.t1 | AT3G06250 | 31.892 | 185 | 110 | 3 | 288 | 463 | 582 | 759 | 1.19e-18 | 90.1 |
MS.gene041308.t1 | AT3G06250 | 24.419 | 344 | 192 | 11 | 18 | 322 | 152 | 466 | 5.80e-18 | 88.2 |
MS.gene041308.t1 | AT3G06250 | 31.892 | 185 | 110 | 3 | 288 | 463 | 582 | 759 | 1.19e-18 | 90.1 |
MS.gene041308.t1 | AT3G06250 | 24.419 | 344 | 192 | 11 | 18 | 322 | 152 | 466 | 5.80e-18 | 88.2 |
MS.gene041308.t1 | AT3G06250 | 31.892 | 185 | 110 | 3 | 288 | 463 | 582 | 759 | 1.19e-18 | 90.1 |
MS.gene041308.t1 | AT3G06250 | 24.419 | 344 | 192 | 11 | 18 | 322 | 152 | 466 | 5.80e-18 | 88.2 |
MS.gene041308.t1 | AT5G18960 | 30.270 | 185 | 113 | 3 | 288 | 463 | 606 | 783 | 8.07e-17 | 84.7 |
MS.gene041308.t1 | AT5G18960 | 27.753 | 227 | 131 | 6 | 22 | 244 | 192 | 389 | 2.07e-16 | 83.2 |
MS.gene041308.t1 | AT5G18960 | 30.270 | 185 | 113 | 3 | 288 | 463 | 606 | 783 | 8.07e-17 | 84.7 |
MS.gene041308.t1 | AT5G18960 | 27.753 | 227 | 131 | 6 | 22 | 244 | 192 | 389 | 2.07e-16 | 83.2 |
MS.gene041308.t1 | AT1G10240 | 25.106 | 235 | 151 | 8 | 24 | 239 | 34 | 262 | 2.32e-13 | 73.6 |
MS.gene041308.t1 | AT1G10240 | 25.106 | 235 | 151 | 8 | 24 | 239 | 34 | 262 | 2.32e-13 | 73.6 |
MS.gene041308.t1 | AT3G07500 | 34.722 | 144 | 86 | 4 | 12 | 148 | 1 | 143 | 2.26e-12 | 67.0 |
MS.gene041308.t1 | AT3G59470 | 29.787 | 141 | 95 | 2 | 1 | 137 | 29 | 169 | 3.03e-12 | 67.4 |
MS.gene041308.t1 | AT3G59470 | 29.787 | 141 | 95 | 2 | 1 | 137 | 29 | 169 | 3.03e-12 | 67.4 |
MS.gene041308.t1 | AT3G59470 | 29.787 | 141 | 95 | 2 | 1 | 137 | 41 | 181 | 4.00e-12 | 67.0 |
MS.gene041308.t1 | AT4G12850 | 33.036 | 112 | 71 | 2 | 30 | 140 | 3 | 111 | 3.97e-11 | 61.6 |
MS.gene041308.t1 | AT2G43280 | 30.392 | 102 | 66 | 1 | 40 | 136 | 21 | 122 | 6.79e-11 | 62.4 |
MS.gene041308.t1 | AT4G12850 | 33.333 | 102 | 67 | 1 | 40 | 140 | 10 | 111 | 8.57e-11 | 61.6 |
Find 90 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCCCACTCTTTATTCTTCT+TGG | 0.122394 | 7.2:-67376555 | None:intergenic |
TTCCTTATGGTGAGTATATT+TGG | 0.133618 | 7.2:+67373212 | MS.gene041308:CDS |
TTTCTTATGTAGCAATTATT+TGG | 0.189986 | 7.2:-67373181 | None:intergenic |
AAAGAATTTGTGATGGAAAA+TGG | 0.198140 | 7.2:+67369331 | MS.gene041308:CDS |
AACGCCGATCTTTATCTAAA+TGG | 0.218779 | 7.2:-67369548 | None:intergenic |
GAAATTTCAAGTTGAAGTTT+TGG | 0.239158 | 7.2:+67376011 | MS.gene041308:CDS |
TTCATATCCTCCATATTCTT+TGG | 0.259642 | 7.2:-67369493 | None:intergenic |
TATGCTAAGTCAGTTGGATT+TGG | 0.280799 | 7.2:+67369156 | MS.gene041308:CDS |
TCAAATTCCATTCCAATGTT+AGG | 0.289388 | 7.2:-67369099 | None:intergenic |
TTCATGTACCGTTGATTTAG+AGG | 0.293148 | 7.2:+67369059 | MS.gene041308:CDS |
CGGCGTTTGGCTTTAGAATC+AGG | 0.298007 | 7.2:+67369564 | MS.gene041308:CDS |
GCCACAATGGCCAAAGAATA+TGG | 0.298617 | 7.2:+67369483 | MS.gene041308:CDS |
GAGCTTTATTGATTCCTCTA+TGG | 0.299611 | 7.2:-67369404 | None:intergenic |
AGAAACATTGGTGTTCCTTA+TGG | 0.306846 | 7.2:+67373199 | MS.gene041308:CDS |
ATAATGTGTCATACCATTCT+TGG | 0.328571 | 7.2:-67376783 | None:intergenic |
ATGCTAAGTCAGTTGGATTT+GGG | 0.354359 | 7.2:+67369157 | MS.gene041308:CDS |
AGGTATTTACTGCTTCTCTT+TGG | 0.367389 | 7.2:-67376725 | None:intergenic |
GGCACAAGCAACCTGTTCTT+AGG | 0.392197 | 7.2:+67375932 | MS.gene041308:CDS |
AGAAGTTGTGTGTTCTAGTA+AGG | 0.397808 | 7.2:+67376314 | MS.gene041308:CDS |
GCTATTGAATTTCTCGAAGA+AGG | 0.413131 | 7.2:+67376363 | MS.gene041308:CDS |
CCTAAAAGAGCAAATACAAA+AGG | 0.426549 | 7.2:+67376528 | MS.gene041308:CDS |
AATGGAGAACATTCTATTGA+TGG | 0.437522 | 7.2:+67368997 | MS.gene041308:CDS |
ATGCTTGCTTCTAACATCCT+TGG | 0.437672 | 7.2:-67376271 | None:intergenic |
ATTGACATTTGCTTCTCAAA+AGG | 0.437914 | 7.2:-67375964 | None:intergenic |
TTTAGATAAAGATCGGCGTT+TGG | 0.438381 | 7.2:+67369551 | MS.gene041308:CDS |
ATATGATTCTTTATATCAAA+AGG | 0.443423 | 7.2:+67376341 | MS.gene041308:CDS |
TCTTTGTAGACATTCATTGA+TGG | 0.446762 | 7.2:+67376191 | MS.gene041308:CDS |
GAATTAATGGAAGTTGTTGA+TGG | 0.448629 | 7.2:+67368973 | None:intergenic |
ATATGAAAACATTGGTTGCT+TGG | 0.449564 | 7.2:+67369509 | MS.gene041308:CDS |
TTCACCATTGAGAACATTTG+AGG | 0.450893 | 7.2:-67376745 | None:intergenic |
GAAAATAATGTGCATTGGAA+TGG | 0.458553 | 7.2:-67369377 | None:intergenic |
TCCATATTCTTTGGCCATTG+TGG | 0.472191 | 7.2:-67369484 | None:intergenic |
AGGAAAGTCATCAGGGTTGA+AGG | 0.473626 | 7.2:+67376883 | MS.gene041308:intron |
GAACATTCTATTGATGGGAA+TGG | 0.475258 | 7.2:+67369003 | MS.gene041308:CDS |
TCAATTGCATAAAAGAATCC+TGG | 0.481905 | 7.2:-67369636 | None:intergenic |
AACAGCTGCATTGCCAAGAA+TGG | 0.484562 | 7.2:+67376770 | MS.gene041308:CDS |
AACAATGTGCAACTATCAAC+CGG | 0.485541 | 7.2:+67376442 | MS.gene041308:CDS |
TTCTTAAAATATAGTGTGAT+GGG | 0.486629 | 7.2:-67376242 | None:intergenic |
AAAGTCGAAAATTGTAAAAG+TGG | 0.487862 | 7.2:-67376082 | None:intergenic |
GGTGATGGAGTCCTAAGAAC+AGG | 0.491171 | 7.2:-67375943 | None:intergenic |
CTAAAAGAGCAAATACAAAA+GGG | 0.494734 | 7.2:+67376529 | MS.gene041308:CDS |
CGTGTTAAAAGAATTTGTGA+TGG | 0.498075 | 7.2:+67369324 | MS.gene041308:CDS |
ATCCAAATATACTCACCATA+AGG | 0.499582 | 7.2:-67373214 | None:intergenic |
ACTCATTATGCTAAGTCAGT+TGG | 0.500199 | 7.2:+67369150 | MS.gene041308:CDS |
AGGAGATGCAAATGCAATGT+TGG | 0.501317 | 7.2:+67369584 | MS.gene041308:CDS |
ATGGAAGTTGTTGATGGGAA+TGG | 0.507690 | 7.2:+67368979 | MS.gene041308:CDS |
GCAAGGAAAATAATGTGCAT+TGG | 0.508445 | 7.2:-67369382 | None:intergenic |
AATACCTCAAATGTTCTCAA+TGG | 0.509038 | 7.2:+67376741 | MS.gene041308:CDS |
AGTTATGCTTGCACAAGATA+CGG | 0.514711 | 7.2:+67369234 | MS.gene041308:CDS |
TCAAAGTTTCTTCAAGTGCA+TGG | 0.515683 | 7.2:-67376419 | None:intergenic |
AAATCCACGTCCTTGTTTGA+AGG | 0.523815 | 7.2:+67369281 | MS.gene041308:CDS |
TTGATGGCATTCCAAGCTGT+TGG | 0.525056 | 7.2:+67376207 | MS.gene041308:CDS |
CTTCTTAAAATATAGTGTGA+TGG | 0.527660 | 7.2:-67376243 | None:intergenic |
ATTGAAACTTTGCACCATGT+TGG | 0.528985 | 7.2:+67369438 | MS.gene041308:CDS |
GAGTATATTTGGATAAAGAA+AGG | 0.540036 | 7.2:+67373223 | MS.gene041308:CDS |
ATTTGCTTCTCAAAAGGTGA+TGG | 0.540522 | 7.2:-67375958 | None:intergenic |
TCCACGTCCTTGTTTGAAGG+TGG | 0.544839 | 7.2:+67369284 | MS.gene041308:CDS |
AATTAATGGAAGTTGTTGAT+GGG | 0.547188 | 7.2:+67368974 | None:intergenic |
GAAACCATTTAGATAAAGAT+CGG | 0.550718 | 7.2:+67369544 | MS.gene041308:CDS |
TTATTGATTCCTCTATGGCA+AGG | 0.554774 | 7.2:-67369399 | None:intergenic |
ATGGAGAACATTCTATTGAT+GGG | 0.556834 | 7.2:+67368998 | MS.gene041308:CDS |
AATTGCTACATAAGAAACAT+TGG | 0.556879 | 7.2:+67373187 | MS.gene041308:CDS |
TATGGAGGATATGAAAACAT+TGG | 0.557417 | 7.2:+67369501 | MS.gene041308:CDS |
CAACACAGACACCAACAGCT+TGG | 0.558938 | 7.2:-67376218 | None:intergenic |
CCACGTCCTTGTTTGAAGGT+GGG | 0.564321 | 7.2:+67369285 | MS.gene041308:CDS |
AGGATAGAGAAGAGGCGGAA+AGG | 0.566665 | 7.2:+67375890 | MS.gene041308:intron |
TCAAGAACCTAACATTGGAA+TGG | 0.572602 | 7.2:+67369092 | MS.gene041308:CDS |
AGAGTGTGATGTCTCGAAGA+AGG | 0.573703 | 7.2:+67376128 | MS.gene041308:CDS |
TGCTTTACAGGATAGAGAAG+AGG | 0.576377 | 7.2:+67375882 | MS.gene041308:intron |
TGCTTGTTCTCACTCCAACA+TGG | 0.579133 | 7.2:-67369452 | None:intergenic |
TGCAATTGATATGGATGATG+AGG | 0.581691 | 7.2:+67369650 | MS.gene041308:CDS |
TTGTTTGAAGGTGGGATGTG+AGG | 0.585943 | 7.2:+67369293 | MS.gene041308:CDS |
CCCACCTTCAAACAAGGACG+TGG | 0.589716 | 7.2:-67369285 | None:intergenic |
TCACATCCCACCTTCAAACA+AGG | 0.596792 | 7.2:-67369291 | None:intergenic |
ATAAAGAGTGGGATCGAGAG+AGG | 0.602973 | 7.2:+67376564 | MS.gene041308:CDS |
GGTGGTCAAGAACCTAACAT+TGG | 0.606305 | 7.2:+67369087 | MS.gene041308:CDS |
GAATGGAGAGCAAGTTGTCA+AGG | 0.614810 | 7.2:+67369020 | MS.gene041308:CDS |
ACCGTTAGCCTCTAAATCAA+CGG | 0.614838 | 7.2:-67369067 | None:intergenic |
TTAGAAGCAAGCATCATACA+AGG | 0.616240 | 7.2:+67376280 | MS.gene041308:CDS |
AAAATCGACAAGGAAAACGT+TGG | 0.622612 | 7.2:+67376471 | MS.gene041308:CDS |
TAAAAGAGCAAATACAAAAG+GGG | 0.623948 | 7.2:+67376530 | MS.gene041308:CDS |
ACCGTTGATTTAGAGGCTAA+CGG | 0.628314 | 7.2:+67369066 | MS.gene041308:CDS |
CTCCAAGAAGAATAAAGAGT+GGG | 0.644223 | 7.2:+67376553 | MS.gene041308:CDS |
CCGGTCTTTGAAAATCGACA+AGG | 0.646121 | 7.2:+67376461 | MS.gene041308:CDS |
TTTACAGGATAGAGAAGAGG+CGG | 0.651231 | 7.2:+67375885 | MS.gene041308:intron |
GCAATTGATATGGATGATGA+GGG | 0.673224 | 7.2:+67369651 | MS.gene041308:CDS |
GCTCCAAGAAGAATAAAGAG+TGG | 0.689620 | 7.2:+67376552 | MS.gene041308:CDS |
AAGAAAGGTATTGACCCACA+AGG | 0.731040 | 7.2:+67373238 | MS.gene041308:CDS |
ACAATGGCCAAAGAATATGG+AGG | 0.745699 | 7.2:+67369486 | MS.gene041308:CDS |
GTTGATTTAGAGGCTAACGG+TGG | 0.762259 | 7.2:+67369069 | MS.gene041308:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 67368979 | 67376902 | 67368979 | ID=MS.gene041308 |
chr7.2 | mRNA | 67368979 | 67376902 | 67368979 | ID=MS.gene041308.t1;Parent=MS.gene041308 |
chr7.2 | exon | 67368979 | 67369708 | 67368979 | ID=MS.gene041308.t1.exon1;Parent=MS.gene041308.t1 |
chr7.2 | CDS | 67368979 | 67369708 | 67368979 | ID=cds.MS.gene041308.t1;Parent=MS.gene041308.t1 |
chr7.2 | exon | 67373173 | 67373276 | 67373173 | ID=MS.gene041308.t1.exon2;Parent=MS.gene041308.t1 |
chr7.2 | CDS | 67373173 | 67373276 | 67373173 | ID=cds.MS.gene041308.t1;Parent=MS.gene041308.t1 |
chr7.2 | exon | 67375892 | 67376620 | 67375892 | ID=MS.gene041308.t1.exon3;Parent=MS.gene041308.t1 |
chr7.2 | CDS | 67375892 | 67376620 | 67375892 | ID=cds.MS.gene041308.t1;Parent=MS.gene041308.t1 |
chr7.2 | exon | 67376714 | 67376791 | 67376714 | ID=MS.gene041308.t1.exon4;Parent=MS.gene041308.t1 |
chr7.2 | CDS | 67376714 | 67376791 | 67376714 | ID=cds.MS.gene041308.t1;Parent=MS.gene041308.t1 |
chr7.2 | exon | 67376885 | 67376902 | 67376885 | ID=MS.gene041308.t1.exon5;Parent=MS.gene041308.t1 |
chr7.2 | CDS | 67376885 | 67376902 | 67376885 | ID=cds.MS.gene041308.t1;Parent=MS.gene041308.t1 |
Gene Sequence |
Protein sequence |