AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene041354

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041354.t1 MTR_2g035660 97.712 437 10 0 1 437 18 454 0.0 895
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041354.t1 AT4G20130 72.494 429 115 3 11 437 30 457 0.0 651
MS.gene041354.t1 AT4G20130 74.631 339 85 1 99 437 1 338 0.0 544
MS.gene041354.t1 AT4G20130 74.631 339 85 1 99 437 1 338 0.0 544

Find 93 sgRNAs with CRISPR-Local

Find 311 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGAATTACCTAACAGTTTC+TGG 0.135526 2.2:+51122894 None:intergenic
CCATGGTAATTTCTTGCTTA+TGG 0.197935 2.2:+51126256 None:intergenic
GAAGCTGTTTCATCATCTTT+AGG 0.257907 2.2:+51127186 None:intergenic
TTGTCAGTCTTCAACATATC+TGG 0.279113 2.2:-51123226 MS.gene041354:CDS
GTATATCTAGGAGGAACTTT+TGG 0.297229 2.2:-51125727 MS.gene041354:intron
CAGTTTCTGGTCTTGCTTAG+AGG 0.304127 2.2:+51122907 None:intergenic
GTCCGAAGTATGCGAGCTTA+TGG 0.311545 2.2:-51126486 MS.gene041354:CDS
AAGGAAGGGCCAAATGGTTT+TGG 0.316532 2.2:-51126453 MS.gene041354:CDS
AACAACGAGCGTTAGAATTC+TGG 0.322289 2.2:-51125662 MS.gene041354:CDS
TGACCAAGGGGAATTATATC+AGG 0.327820 2.2:+51126224 None:intergenic
TTCAAGAGTTCTCGTAGCTT+CGG 0.331867 2.2:+51122379 None:intergenic
TTCCTTTCTTCACTTGGGAT+TGG 0.339331 2.2:+51122986 None:intergenic
TGAACTTGGGCAGGTTATAA+TGG 0.358603 2.2:-51126303 MS.gene041354:intron
GCAGCCTTCCTTTCTTCACT+TGG 0.361561 2.2:+51122980 None:intergenic
TAGAATTCTGGGAGAAGAAC+TGG 0.366779 2.2:-51125650 MS.gene041354:CDS
TGGCGACCCACTTACTCGTT+TGG 0.373384 2.2:-51127282 MS.gene041354:CDS
TTGACTGCAAAGACAACTTT+TGG 0.380436 2.2:-51125937 MS.gene041354:CDS
AATCTTTGTGGCAGACAGAT+TGG 0.384792 2.2:-51125994 MS.gene041354:intron
GTTTCAACAGAAGCTTTAAC+AGG 0.387453 2.2:+51127234 None:intergenic
AGGCAATGCACGAATCCATT+TGG 0.393759 2.2:-51123257 MS.gene041354:CDS
ACTTAAATATGCAGAATCCT+TGG 0.397663 2.2:-51123297 MS.gene041354:intron
AATCCTATCTTGTAGAAATC+AGG 0.398262 2.2:+51126510 None:intergenic
GATCCTGATTTCTACAAGAT+AGG 0.398743 2.2:-51126513 MS.gene041354:CDS
CCGTTACGATAATACTCTTC+AGG 0.400533 2.2:+51123199 None:intergenic
CTTTCTTCACTTGGGATTGG+AGG 0.404062 2.2:+51122989 None:intergenic
AAGCAAGACCAGAAACTGTT+AGG 0.413582 2.2:-51122902 MS.gene041354:intron
ATCTTTGTGGCAGACAGATT+GGG 0.429709 2.2:-51125993 MS.gene041354:intron
GAGGCTGAAACAAGGGAAAT+GGG 0.430134 2.2:+51127208 None:intergenic
GAGTTGATAATATCAAATAT+TGG 0.430427 2.2:+51126200 None:intergenic
CTTAAATATGCAGAATCCTT+GGG 0.431199 2.2:-51123296 MS.gene041354:intron
TCAAGAGTTCTCGTAGCTTC+GGG 0.432228 2.2:+51122380 None:intergenic
CTTGAGGTTCTTATAAATGC+TGG 0.434356 2.2:-51125154 MS.gene041354:CDS
GGAGGCTGAAACAAGGGAAA+TGG 0.441003 2.2:+51127207 None:intergenic
CAGCCTTCCTTTCTTCACTT+GGG 0.444382 2.2:+51122981 None:intergenic
GCTAGTACTTTCATCTGCAC+TGG 0.452982 2.2:+51125892 None:intergenic
TTCCCTGATATAATTCCCCT+TGG 0.459258 2.2:-51126227 MS.gene041354:CDS
TTGTAGAAATCAGGATCTAC+AGG 0.465598 2.2:+51126519 None:intergenic
CTCCATAAGCTCGCATACTT+CGG 0.475886 2.2:+51126484 None:intergenic
ACTGCCCACATGAACCTTTG+AGG 0.479039 2.2:+51125491 None:intergenic
GTTTGCGCCATGGTTATTTG+TGG 0.479861 2.2:-51127302 MS.gene041354:CDS
ACAACGAGCGTTAGAATTCT+GGG 0.481989 2.2:-51125661 MS.gene041354:CDS
GAACAAAGCTTACCAGCATA+AGG 0.490671 2.2:+51125392 None:intergenic
AACAATTTGGCTCAAACGAA+TGG 0.492685 2.2:+51125206 None:intergenic
CTGACAAGAAAGAATCCAAA+TGG 0.492742 2.2:+51123242 None:intergenic
GCATATACACCAAAACCATT+TGG 0.494211 2.2:+51126444 None:intergenic
TCTCATTGTAGAAGCAAGAT+CGG 0.504225 2.2:+51125692 None:intergenic
TGGGATGTGATCAAATTCTC+AGG 0.506817 2.2:-51123277 MS.gene041354:CDS
ATCAAATATTGGATGACCAA+GGG 0.508658 2.2:+51126211 None:intergenic
CTCCAATCCCAAGTGAAGAA+AGG 0.512257 2.2:-51122988 MS.gene041354:CDS
TCTTTAGGAGGCTGAAACAA+GGG 0.516914 2.2:+51127201 None:intergenic
CAGTTCAAAGGTTTGCGCCA+TGG 0.522935 2.2:-51127312 MS.gene041354:CDS
GTTAATCTTGTTCAGCATAG+TGG 0.526606 2.2:-51125548 MS.gene041354:intron
TGCTGGACAACGGATAAGAA+AGG 0.527485 2.2:-51125137 MS.gene041354:CDS
CTCATTGTAGAAGCAAGATC+GGG 0.528009 2.2:+51125693 None:intergenic
TTACTTTCTAAACAGTTCAA+AGG 0.544119 2.2:-51127324 None:intergenic
TCGAACCTCTTCGCCGACCA+AGG 0.545300 2.2:-51126410 MS.gene041354:CDS
AATATGCTGATTCCTTATGC+TGG 0.547916 2.2:-51125404 MS.gene041354:intron
CAAAGGTTCATGTGGGCAGT+AGG 0.553144 2.2:-51125488 MS.gene041354:CDS
GCAGAAGTTCTATCGAGCAC+TGG 0.557263 2.2:-51123082 MS.gene041354:intron
CAGCACGAACATTGCCAACA+TGG 0.557449 2.2:-51123027 MS.gene041354:CDS
GCTGTTTCATCATCTTTAGG+AGG 0.562065 2.2:+51127189 None:intergenic
GCTGGACAACGGATAAGAAA+GGG 0.563259 2.2:-51125136 MS.gene041354:CDS
AGATGATGAAACAGCTTCTG+AGG 0.564802 2.2:-51127181 MS.gene041354:intron
CTCACCCTTGGTCGGCGAAG+AGG 0.565363 2.2:+51126405 None:intergenic
GACATGTTAATGCAAAGATA+CGG 0.568057 2.2:-51123736 MS.gene041354:CDS
CTAGTACTTTCATCTGCACT+GGG 0.569363 2.2:+51125893 None:intergenic
TCCTGTCCTTAAAACGCCAA+TGG 0.569618 2.2:+51125179 None:intergenic
TTTCTGGTCTTGCTTAGAGG+TGG 0.573797 2.2:+51122910 None:intergenic
GTGATCCTCAAAGGTTCATG+TGG 0.575415 2.2:-51125496 MS.gene041354:CDS
GAGAATTTGATCACATCCCA+AGG 0.578387 2.2:+51123280 None:intergenic
GTCTTGCTCGTGATCCTCAA+AGG 0.578672 2.2:-51125505 MS.gene041354:CDS
ATCTTTAGGAGGCTGAAACA+AGG 0.580488 2.2:+51127200 None:intergenic
TATCAAATATTGGATGACCA+AGG 0.581735 2.2:+51126210 None:intergenic
AGTCAAATGAAAACAAGAGA+AGG 0.583863 2.2:+51125954 None:intergenic
AATCCCAAGTGAAGAAAGGA+AGG 0.592614 2.2:-51122984 MS.gene041354:CDS
CCTGAAGAGTATTATCGTAA+CGG 0.595528 2.2:-51123199 MS.gene041354:intron
ATGGTTAGCATCAATTCAAG+AGG 0.596700 2.2:+51126275 None:intergenic
CGAACCTCTTCGCCGACCAA+GGG 0.606118 2.2:-51126409 MS.gene041354:intron
GACCAAGGGGAATTATATCA+GGG 0.608421 2.2:+51126225 None:intergenic
TGAGGCTACTCACCCTTGGT+CGG 0.610693 2.2:+51126397 None:intergenic
AGGCTGAAACAAGGGAAATG+GGG 0.620587 2.2:+51127209 None:intergenic
TCAAATATTGGATGACCAAG+GGG 0.620822 2.2:+51126212 None:intergenic
ACATTGCCAACATGGTCAGA+TGG 0.621351 2.2:-51123019 MS.gene041354:CDS
AGAATTCTGGGAGAAGAACT+GGG 0.626608 2.2:-51125649 MS.gene041354:intron
TTCTTATAAATGCTGGACAA+CGG 0.630290 2.2:-51125147 MS.gene041354:CDS
ACATCTCCATCTGACCATGT+TGG 0.640415 2.2:+51123013 None:intergenic
TACGATAATACTCTTCAGGA+AGG 0.641879 2.2:+51123203 None:intergenic
ACGGATAAGAAAGGGAGATG+AGG 0.666436 2.2:-51125128 MS.gene041354:intron
TAGCTTACTTCTAGCTACAG+AGG 0.670222 2.2:-51125873 MS.gene041354:intron
TGATCCTCAAAGGTTCATGT+GGG 0.670337 2.2:-51125495 MS.gene041354:CDS
CCATAAGCAAGAAATTACCA+TGG 0.675291 2.2:-51126256 MS.gene041354:CDS
TATCAACTCAACAAATCCAG+AGG 0.680162 2.2:-51126186 MS.gene041354:intron
TGGGTCGCCACAAATAACCA+TGG 0.693090 2.2:+51127295 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTATGATAGATTTAA+CGG + chr2.2:51125285-51125304 None:intergenic 10.0%
!! ATTTCATCTTATAAAATTAT+AGG + chr2.2:51122771-51122790 None:intergenic 10.0%
!! CATTATACAAATAATTAATG+AGG + chr2.2:51123301-51123320 None:intergenic 15.0%
!! TATTTAAAAGTTATAAGACA+TGG - chr2.2:51126098-51126117 MS.gene041354:intron 15.0%
!! TCTTTGTATTAAAAAATTGT+GGG - chr2.2:51126031-51126050 MS.gene041354:intron 15.0%
!!! AACTTAAAACTTTCTTTTTT+GGG + chr2.2:51126979-51126998 None:intergenic 15.0%
!!! CATTTTGAAAGAATTTTAAA+AGG + chr2.2:51126893-51126912 None:intergenic 15.0%
!!! GTGATTATAATTTAAAATGT+TGG - chr2.2:51122925-51122944 MS.gene041354:CDS 15.0%
!!! TTATACTAAATCTTTTTGAA+AGG - chr2.2:51125992-51126011 MS.gene041354:intron 15.0%
!! ACACAATGAAATAATACAAA+TGG + chr2.2:51125848-51125867 None:intergenic 20.0%
!! AGAAATATTAAGCATATTTG+TGG - chr2.2:51125363-51125382 MS.gene041354:intron 20.0%
!! CGTTCTAATATTTACTTTAT+GGG - chr2.2:51126914-51126933 MS.gene041354:intron 20.0%
!! CTCTTTGTATTAAAAAATTG+TGG - chr2.2:51126030-51126049 MS.gene041354:intron 20.0%
!! CTTAAAAAAGTAAAAAACGT+TGG - chr2.2:51123627-51123646 MS.gene041354:intron 20.0%
!! TCGTTCTAATATTTACTTTA+TGG - chr2.2:51126913-51126932 MS.gene041354:intron 20.0%
!! TTTCTTAATCAGTTATTACA+CGG + chr2.2:51125559-51125578 None:intergenic 20.0%
!!! AAAAGAATGTTACCTTTTTT+GGG - chr2.2:51122630-51122649 MS.gene041354:intron 20.0%
!!! ATGATCAATGTTTTAAAAAC+TGG - chr2.2:51124851-51124870 MS.gene041354:intron 20.0%
!!! ATTATGAGATATAGTTTTAG+AGG - chr2.2:51125141-51125160 MS.gene041354:CDS 20.0%
!!! CAACTTAAAACTTTCTTTTT+TGG + chr2.2:51126980-51126999 None:intergenic 20.0%
!!! CTGTTGTTATTTTATCAAAA+AGG + chr2.2:51124409-51124428 None:intergenic 20.0%
!!! GAATTTTGGACAATATAATT+AGG + chr2.2:51125882-51125901 None:intergenic 20.0%
!!! GAGTTGATAATATCAAATAT+TGG + chr2.2:51123480-51123499 None:intergenic 20.0%
!!! TTAGCTTTTTTTATCGTATA+AGG + chr2.2:51127237-51127256 None:intergenic 20.0%
!!! TTTGGTTGTTGTTTATTTAT+TGG - chr2.2:51122558-51122577 MS.gene041354:intron 20.0%
!!! TTTGTTTATACTACTGTTTT+TGG - chr2.2:51122540-51122559 MS.gene041354:intron 20.0%
!!! TTTTCAAATCGGAATTATTT+AGG - chr2.2:51126552-51126571 MS.gene041354:intron 20.0%
!!! TTTTGATAAAATAACAACAG+AGG - chr2.2:51124409-51124428 MS.gene041354:intron 20.0%
!!! TTTTGGATGAATTCTTTAAA+GGG - chr2.2:51123039-51123058 MS.gene041354:CDS 20.0%
!!! TTTTTGGATGAATTCTTTAA+AGG - chr2.2:51123038-51123057 MS.gene041354:CDS 20.0%
! AAAGCTGTTAACGTTATAAA+AGG - chr2.2:51125503-51125522 MS.gene041354:CDS 25.0%
! AACAGTAGTATAAACAAACA+AGG + chr2.2:51122538-51122557 None:intergenic 25.0%
! AATGGTAATTTAAACATGCT+AGG + chr2.2:51125830-51125849 None:intergenic 25.0%
! AATTATGATAGATTTAACGG+AGG + chr2.2:51125282-51125301 None:intergenic 25.0%
! AATTTATTTGTTCCTCTAGT+TGG - chr2.2:51123133-51123152 MS.gene041354:intron 25.0%
! ATATTAAGCATATTTGTGGA+CGG - chr2.2:51125367-51125386 MS.gene041354:intron 25.0%
! CTAGATCATTAAAAACTGTT+AGG + chr2.2:51125693-51125712 None:intergenic 25.0%
! CTTCTCAAAAGTTTAAAAAG+TGG + chr2.2:51127009-51127028 None:intergenic 25.0%
! GAAGACAAAAAATTTCAACA+AGG + chr2.2:51124069-51124088 None:intergenic 25.0%
! GAAGGTAGTAAAAATATAGA+CGG - chr2.2:51124701-51124720 MS.gene041354:intron 25.0%
! GTTAGCTAAATATCAATCAA+TGG + chr2.2:51123861-51123880 None:intergenic 25.0%
! TAAAGAATTCATCCAAAAAC+TGG + chr2.2:51123037-51123056 None:intergenic 25.0%
! TACGAAAATGATAGAATAGT+TGG + chr2.2:51124327-51124346 None:intergenic 25.0%
! TATAAAAAGAAAGTTACCAC+TGG + chr2.2:51125977-51125996 None:intergenic 25.0%
! TATTATTTCATTGTGTGACA+TGG - chr2.2:51125852-51125871 MS.gene041354:intron 25.0%
! TGAGATATTTAGTTGTGATA+TGG - chr2.2:51123081-51123100 MS.gene041354:CDS 25.0%
! TGTAATTGTGTAAATCTTTG+TGG - chr2.2:51123671-51123690 MS.gene041354:intron 25.0%
! TGTTAGGTAGAAAAAAAAAC+TGG + chr2.2:51125677-51125696 None:intergenic 25.0%
! TTAGAAGCTTGAAAACTAAT+TGG - chr2.2:51125745-51125764 MS.gene041354:intron 25.0%
! TTCTTAATCAGTTATTACAC+GGG + chr2.2:51125558-51125577 None:intergenic 25.0%
!! ACAAAAAGTCTATCTAGTTT+GGG + chr2.2:51124677-51124696 None:intergenic 25.0%
!! CTCACAAAACTTGATTTTTA+AGG + chr2.2:51125613-51125632 None:intergenic 25.0%
!! TAGTTTTTGTTCTCAACAAA+TGG - chr2.2:51124105-51124124 MS.gene041354:intron 25.0%
!! TTTTGAACTAATGACTTTAG+AGG + chr2.2:51123530-51123549 None:intergenic 25.0%
!!! CAAAAGAATGTTACCTTTTT+TGG - chr2.2:51122629-51122648 MS.gene041354:intron 25.0%
!!! TCATGTTGATTTGTATATCT+AGG - chr2.2:51123938-51123957 MS.gene041354:intron 25.0%
AAACAAACAAGGTGCAAAAT+GGG + chr2.2:51122527-51122546 None:intergenic 30.0%
AAACATGACACTAATTGTCA+TGG + chr2.2:51126868-51126887 None:intergenic 30.0%
AATCCTATCTTGTAGAAATC+AGG + chr2.2:51123170-51123189 None:intergenic 30.0%
ACACTTGATGTACTGAATAA+AGG - chr2.2:51125181-51125200 MS.gene041354:CDS 30.0%
ACTTAAATATGCAGAATCCT+TGG - chr2.2:51126380-51126399 MS.gene041354:intron 30.0%
ACTTATACATGTTTGCCATT+TGG - chr2.2:51126323-51126342 MS.gene041354:intron 30.0%
AGTAACGTCTAATATAAGGA+AGG + chr2.2:51124616-51124635 None:intergenic 30.0%
AGTCAAATGAAAACAAGAGA+AGG + chr2.2:51123726-51123745 None:intergenic 30.0%
AGTCATAATCTAAGTGACAT+AGG - chr2.2:51125711-51125730 MS.gene041354:CDS 30.0%
ATCAAATATTGGATGACCAA+GGG + chr2.2:51123469-51123488 None:intergenic 30.0%
ATTGGTTGAAAGTAACAACT+AGG - chr2.2:51122576-51122595 MS.gene041354:intron 30.0%
CAAATATAGTAATCTCGCAT+TGG + chr2.2:51127047-51127066 None:intergenic 30.0%
CACAAAAAGTCTATCTAGTT+TGG + chr2.2:51124678-51124697 None:intergenic 30.0%
CACAAGTAACGTCTAATATA+AGG + chr2.2:51124620-51124639 None:intergenic 30.0%
CCACATTCTTACCTAAATAT+AGG - chr2.2:51126134-51126153 MS.gene041354:intron 30.0%
CCTATATTTAGGTAAGAATG+TGG + chr2.2:51126137-51126156 None:intergenic 30.0%
CTTAAATATGCAGAATCCTT+GGG - chr2.2:51126381-51126400 MS.gene041354:intron 30.0%
GACATGTTAATGCAAAGATA+CGG - chr2.2:51125941-51125960 MS.gene041354:CDS 30.0%
GCAATATCTTCATTCCTATA+AGG - chr2.2:51123011-51123030 MS.gene041354:CDS 30.0%
TAAACAAACAAGGTGCAAAA+TGG + chr2.2:51122528-51122547 None:intergenic 30.0%
TATCAAATATTGGATGACCA+AGG + chr2.2:51123470-51123489 None:intergenic 30.0%
TATTAAGCATATTTGTGGAC+GGG - chr2.2:51125368-51125387 MS.gene041354:intron 30.0%
TGATCATTACCACATATACA+CGG + chr2.2:51124838-51124857 None:intergenic 30.0%
TTCTTATAAATGCTGGACAA+CGG - chr2.2:51124530-51124549 MS.gene041354:intron 30.0%
! ACTGTCATCTGTTAGAATTT+TGG + chr2.2:51125896-51125915 None:intergenic 30.0%
! GCACATTTCTCTTTTCAAAT+CGG - chr2.2:51126541-51126560 MS.gene041354:intron 30.0%
! TTAAAAAATTGTGGGCTGAT+AGG - chr2.2:51126039-51126058 MS.gene041354:intron 30.0%
! TTTTCCCTAATGATGAACTT+GGG - chr2.2:51123361-51123380 MS.gene041354:intron 30.0%
!! AATCAAGTTTTGTGAGAAGA+AGG - chr2.2:51125617-51125636 MS.gene041354:intron 30.0%
!! AGCTTATGGAGTTGATTTTA+AGG - chr2.2:51123205-51123224 MS.gene041354:CDS 30.0%
!! AGTCATTTTGCGAAAAACAA+GGG + chr2.2:51127160-51127179 None:intergenic 30.0%
!! ATGGAGTTGATTTTAAGGAA+GGG - chr2.2:51123210-51123229 MS.gene041354:CDS 30.0%
!! TAAAGTGGATTCTAAAACTG+TGG + chr2.2:51123911-51123930 None:intergenic 30.0%
!! TATGGAGTTGATTTTAAGGA+AGG - chr2.2:51123209-51123228 MS.gene041354:CDS 30.0%
!! TGTTGATTTGTATATCTAGG+AGG - chr2.2:51123941-51123960 MS.gene041354:intron 30.0%
!!! AGCCAAATTGTTTTTTCCAT+TGG - chr2.2:51124482-51124501 MS.gene041354:intron 30.0%
!!! TTTTTTCCATTGGCGTTTTA+AGG - chr2.2:51124492-51124511 MS.gene041354:intron 30.0%
AAGAAGCAACTGCACATATA+TGG + chr2.2:51126247-51126266 None:intergenic 35.0%
ACAAAAACCAAACGAGTAAG+TGG + chr2.2:51122405-51122424 None:intergenic 35.0%
ACATCAGATGTAGCTACATT+TGG - chr2.2:51123879-51123898 MS.gene041354:intron 35.0%
ACATCTGACCAAATAAATGC+AGG - chr2.2:51125102-51125121 MS.gene041354:intron 35.0%
ACTTCTCTGATATCTAACCA+TGG - chr2.2:51125531-51125550 MS.gene041354:CDS 35.0%
AGCATTAAGGAAGTCTGTAT+TGG - chr2.2:51126177-51126196 MS.gene041354:intron 35.0%
AGTATATTTGTGTGCAGATG+TGG + chr2.2:51125059-51125078 None:intergenic 35.0%
ATAGTTGGTTAGACCATTTG+AGG + chr2.2:51124312-51124331 None:intergenic 35.0%
ATATCAGGGAAAAACATCCA+TGG + chr2.2:51123441-51123460 None:intergenic 35.0%
ATGGTTAGCATCAATTCAAG+AGG + chr2.2:51123405-51123424 None:intergenic 35.0%
ATTCTGAGTAGTTGTCCATA+TGG - chr2.2:51123335-51123354 MS.gene041354:intron 35.0%
ATTTCACATCCGTGTATATG+TGG - chr2.2:51124826-51124845 MS.gene041354:intron 35.0%
CAAAAACCAAACGAGTAAGT+GGG + chr2.2:51122404-51122423 None:intergenic 35.0%
CACGAGAGTGAGAATAATTA+TGG - chr2.2:51125581-51125600 MS.gene041354:intron 35.0%
CATTTATTTGGTCAGATGTG+GGG + chr2.2:51125101-51125120 None:intergenic 35.0%
CCATAAGCAAGAAATTACCA+TGG - chr2.2:51123421-51123440 MS.gene041354:intron 35.0%
CCATGGTAATTTCTTGCTTA+TGG + chr2.2:51123424-51123443 None:intergenic 35.0%
CGACTAAACTATGAGCATTA+AGG - chr2.2:51126164-51126183 MS.gene041354:intron 35.0%
CGCCAATGGAAAAAACAATT+TGG + chr2.2:51124487-51124506 None:intergenic 35.0%
CTAGTCCACCAATAAAGTAA+GGG + chr2.2:51127110-51127129 None:intergenic 35.0%
CTGAATTACCTAACAGTTTC+TGG + chr2.2:51126786-51126805 None:intergenic 35.0%
CTGACAAGAAAGAATCCAAA+TGG + chr2.2:51126438-51126457 None:intergenic 35.0%
CTTGAGGTTCTTATAAATGC+TGG - chr2.2:51124523-51124542 MS.gene041354:intron 35.0%
GAAAGTAACAACTAGGACTA+AGG - chr2.2:51122583-51122602 MS.gene041354:intron 35.0%
GATCCTGATTTCTACAAGAT+AGG - chr2.2:51123164-51123183 MS.gene041354:intron 35.0%
GCATATACACCAAAACCATT+TGG + chr2.2:51123236-51123255 None:intergenic 35.0%
GCATTTATTTGGTCAGATGT+GGG + chr2.2:51125102-51125121 None:intergenic 35.0%
GTAGCGAGACTTTAAATTGA+AGG + chr2.2:51122850-51122869 None:intergenic 35.0%
GTATATTTGTGTGCAGATGT+GGG + chr2.2:51125058-51125077 None:intergenic 35.0%
GTTAATCTTGTTCAGCATAG+TGG - chr2.2:51124129-51124148 MS.gene041354:intron 35.0%
TAAAAACTCAGTGGACCAAA+TGG + chr2.2:51126341-51126360 None:intergenic 35.0%
TACGATAATACTCTTCAGGA+AGG + chr2.2:51126477-51126496 None:intergenic 35.0%
TAGCATTGCCCTTACTTTAT+TGG - chr2.2:51127099-51127118 MS.gene041354:intron 35.0%
TAGGCTAGTATAAAGGAACT+AGG - chr2.2:51124750-51124769 MS.gene041354:intron 35.0%
TATATTTGTGTGCAGATGTG+GGG + chr2.2:51125057-51125076 None:intergenic 35.0%
TATCAACTCAACAAATCCAG+AGG - chr2.2:51123491-51123510 MS.gene041354:intron 35.0%
TCAAATATTGGATGACCAAG+GGG + chr2.2:51123468-51123487 None:intergenic 35.0%
TCTAGTCCACCAATAAAGTA+AGG + chr2.2:51127111-51127130 None:intergenic 35.0%
TCTCATTGTAGAAGCAAGAT+CGG + chr2.2:51123988-51124007 None:intergenic 35.0%
TGCATTTATTTGGTCAGATG+TGG + chr2.2:51125103-51125122 None:intergenic 35.0%
TGGTCATTAAACGAAAGCTA+AGG + chr2.2:51127266-51127285 None:intergenic 35.0%
TGTGCATATGTGACATGATA+CGG - chr2.2:51122728-51122747 MS.gene041354:intron 35.0%
TTCAACGTAGGCTAGTATAA+AGG - chr2.2:51124743-51124762 MS.gene041354:intron 35.0%
TTGTAGAAATCAGGATCTAC+AGG + chr2.2:51123161-51123180 None:intergenic 35.0%
TTGTCAGTCTTCAACATATC+TGG - chr2.2:51126451-51126470 MS.gene041354:CDS 35.0%
TTGTTGCCTAAATCCAACAT+GGG - chr2.2:51125462-51125481 MS.gene041354:CDS 35.0%
! AACAATTTGGCTCAAACGAA+TGG + chr2.2:51124474-51124493 None:intergenic 35.0%
! ACTAGATAGACTTTTTGTGC+AGG - chr2.2:51124679-51124698 MS.gene041354:intron 35.0%
! ACTGGAGATACTTTTGTTGA+TGG - chr2.2:51126613-51126632 MS.gene041354:intron 35.0%
! ACTTTATGGGTTATGCTAAC+CGG - chr2.2:51126927-51126946 MS.gene041354:intron 35.0%
! AGAGTATTATCGTAACGGTA+TGG - chr2.2:51126483-51126502 MS.gene041354:CDS 35.0%
! ATATGAGACCTTTTTGTTGG+TGG - chr2.2:51122656-51122675 MS.gene041354:intron 35.0%
! ATTCCTATAAGGCCAGTTTT+TGG - chr2.2:51123022-51123041 MS.gene041354:CDS 35.0%
! GAAGCTGTTTCATCATCTTT+AGG + chr2.2:51122494-51122513 None:intergenic 35.0%
! GACAACTTTTGGCAGTATTA+CGG - chr2.2:51123751-51123770 MS.gene041354:CDS 35.0%
! GTATATCTAGGAGGAACTTT+TGG - chr2.2:51123950-51123969 MS.gene041354:intron 35.0%
! GTTTCAACAGAAGCTTTAAC+AGG + chr2.2:51122446-51122465 None:intergenic 35.0%
! GTTTTCCCTAATGATGAACT+TGG - chr2.2:51123360-51123379 MS.gene041354:intron 35.0%
! TATGAGACCTTTTTGTTGGT+GGG - chr2.2:51122657-51122676 MS.gene041354:intron 35.0%
! TGCATATGAGACCTTTTTGT+TGG - chr2.2:51122653-51122672 MS.gene041354:intron 35.0%
! TTGACTGCAAAGACAACTTT+TGG - chr2.2:51123740-51123759 MS.gene041354:CDS 35.0%
!! AATATGCTGATTCCTTATGC+TGG - chr2.2:51124273-51124292 MS.gene041354:intron 35.0%
!! CAAAAGTGCCTGCATTTATT+TGG + chr2.2:51125113-51125132 None:intergenic 35.0%
!! CAGTCATTTTGCGAAAAACA+AGG + chr2.2:51127161-51127180 None:intergenic 35.0%
!! CCTGAAGAGTATTATCGTAA+CGG - chr2.2:51126478-51126497 MS.gene041354:CDS 35.0%
!! TAAGCTTTGTTCACCTCAAA+TGG - chr2.2:51124296-51124315 MS.gene041354:intron 35.0%
AACAACGAGCGTTAGAATTC+TGG - chr2.2:51124015-51124034 MS.gene041354:intron 40.0%
AAGCAAGACCAGAAACTGTT+AGG - chr2.2:51126775-51126794 MS.gene041354:intron 40.0%
AATCCCAAGTGAAGAAAGGA+AGG - chr2.2:51126693-51126712 MS.gene041354:intron 40.0%
AATCTTTGTGGCAGACAGAT+TGG - chr2.2:51123683-51123702 MS.gene041354:intron 40.0%
ACAACGAGCGTTAGAATTCT+GGG - chr2.2:51124016-51124035 MS.gene041354:intron 40.0%
ACAGGACACAATATCCAACT+GGG - chr2.2:51126064-51126083 MS.gene041354:intron 40.0%
AGATGATGAAACAGCTTCTG+AGG - chr2.2:51122496-51122515 MS.gene041354:intron 40.0%
AGGATGATTGCAATTACCTC+TGG + chr2.2:51123510-51123529 None:intergenic 40.0%
ATAGCCATAGTGAATACGAG+AGG + chr2.2:51124778-51124797 None:intergenic 40.0%
ATATTTCAGACATCCCCAGT+TGG + chr2.2:51126081-51126100 None:intergenic 40.0%
ATCTTTGTGGCAGACAGATT+GGG - chr2.2:51123684-51123703 MS.gene041354:intron 40.0%
ATGAATCGCCTGAAGTAAAC+GGG - chr2.2:51127134-51127153 MS.gene041354:intron 40.0%
CAACATGAGATGTCGTAAAG+TGG + chr2.2:51123926-51123945 None:intergenic 40.0%
CATGAATCGCCTGAAGTAAA+CGG - chr2.2:51127133-51127152 MS.gene041354:intron 40.0%
CATTAGGGAAAACAGCCATA+TGG + chr2.2:51123353-51123372 None:intergenic 40.0%
CATTGCCCTTACTTTATTGG+TGG - chr2.2:51127102-51127121 MS.gene041354:intron 40.0%
CCGTTACGATAATACTCTTC+AGG + chr2.2:51126481-51126500 None:intergenic 40.0%
CTAGTACTTTCATCTGCACT+GGG + chr2.2:51123787-51123806 None:intergenic 40.0%
CTCATTGTAGAAGCAAGATC+GGG + chr2.2:51123987-51124006 None:intergenic 40.0%
CTTTATGCCCACCAACAAAA+AGG + chr2.2:51122667-51122686 None:intergenic 40.0%
GAACAAAGCTTACCAGCATA+AGG + chr2.2:51124288-51124307 None:intergenic 40.0%
GACCAAGGGGAATTATATCA+GGG + chr2.2:51123455-51123474 None:intergenic 40.0%
GAGAATTTGATCACATCCCA+AGG + chr2.2:51126400-51126419 None:intergenic 40.0%
GCAACACACAAGAAACAGAA+GGG - chr2.2:51125425-51125444 MS.gene041354:CDS 40.0%
GTCGATGAGGACCTATATTT+AGG + chr2.2:51126148-51126167 None:intergenic 40.0%
GTCTCATATGCACCCAAAAA+AGG + chr2.2:51122645-51122664 None:intergenic 40.0%
GTTGTTGCCTAAATCCAACA+TGG - chr2.2:51125461-51125480 MS.gene041354:CDS 40.0%
TACAGGACACAATATCCAAC+TGG - chr2.2:51126063-51126082 MS.gene041354:intron 40.0%
TGAACTTGGGCAGGTTATAA+TGG - chr2.2:51123374-51123393 MS.gene041354:intron 40.0%
TGACCAAGGGGAATTATATC+AGG + chr2.2:51123456-51123475 None:intergenic 40.0%
TGATCCTCAAAGGTTCATGT+GGG - chr2.2:51124182-51124201 MS.gene041354:intron 40.0%
TGCAACACACAAGAAACAGA+AGG - chr2.2:51125424-51125443 MS.gene041354:CDS 40.0%
TGCTCATAGTTTAGTCGATG+AGG + chr2.2:51126161-51126180 None:intergenic 40.0%
TGGGATGTGATCAAATTCTC+AGG - chr2.2:51126400-51126419 MS.gene041354:intron 40.0%
TGTTGGATTTAGGCAACAAC+AGG + chr2.2:51125461-51125480 None:intergenic 40.0%
TTCAAGAGTTCTCGTAGCTT+CGG + chr2.2:51127301-51127320 None:intergenic 40.0%
TTCCCTGATATAATTCCCCT+TGG - chr2.2:51123450-51123469 MS.gene041354:intron 40.0%
TTCCTTAACGATTGCCCTAA+GGG + chr2.2:51126955-51126974 None:intergenic 40.0%
TTCCTTTCTTCACTTGGGAT+TGG + chr2.2:51126694-51126713 None:intergenic 40.0%
TTCGTACTCATGCATAGTAG+CGG - chr2.2:51124341-51124360 MS.gene041354:intron 40.0%
TTTCCTTAACGATTGCCCTA+AGG + chr2.2:51126956-51126975 None:intergenic 40.0%
! AGAATTCTGGGAGAAGAACT+GGG - chr2.2:51124028-51124047 MS.gene041354:intron 40.0%
! ATCTTTAGGAGGCTGAAACA+AGG + chr2.2:51122480-51122499 None:intergenic 40.0%
! CTTTAGGAAGATTGCATGCT+TGG + chr2.2:51124998-51125017 None:intergenic 40.0%
! GATAGACTTTTTGTGCAGGA+AGG - chr2.2:51124683-51124702 MS.gene041354:intron 40.0%
! GCAAGACGTTTTACTTTGAG+CGG + chr2.2:51124159-51124178 None:intergenic 40.0%
! GCATGTCAGATTTTCAACGT+AGG - chr2.2:51124731-51124750 MS.gene041354:intron 40.0%
! GCTGTTTCATCATCTTTAGG+AGG + chr2.2:51122491-51122510 None:intergenic 40.0%
! TAGAATTCTGGGAGAAGAAC+TGG - chr2.2:51124027-51124046 MS.gene041354:intron 40.0%
! TAGCTTACTTCTAGCTACAG+AGG - chr2.2:51123804-51123823 MS.gene041354:intron 40.0%
! TAGTGGTCTTACTCTTAAGC+CGG - chr2.2:51122696-51122715 MS.gene041354:intron 40.0%
! TCTTTAGGAGGCTGAAACAA+GGG + chr2.2:51122479-51122498 None:intergenic 40.0%
!! CAAGTTTTGTGAGAAGAAGG+TGG - chr2.2:51125620-51125639 MS.gene041354:intron 40.0%
!! CATCCAAAAACTGGCCTTAT+AGG + chr2.2:51123028-51123047 None:intergenic 40.0%
!! GATTTTAAGGAAGGGCCAAA+TGG - chr2.2:51123218-51123237 MS.gene041354:CDS 40.0%
!! GCATAAAGCGAGTGTTTTAG+TGG - chr2.2:51122679-51122698 MS.gene041354:intron 40.0%
!! TTTTAAGGACAGGATGCTTG+AGG - chr2.2:51124507-51124526 MS.gene041354:intron 40.0%
!!! GCTCGGTGTTTCTTTTCTTT+AGG + chr2.2:51125014-51125033 None:intergenic 40.0%
AATGCTAACCAATGCCCTCA+GGG + chr2.2:51127086-51127105 None:intergenic 45.0%
ACATCTCCATCTGACCATGT+TGG + chr2.2:51126667-51126686 None:intergenic 45.0%
ACATTGAAGCTAATCGTCGC+TGG - chr2.2:51125239-51125258 MS.gene041354:intron 45.0%
ACATTGCCAACATGGTCAGA+TGG - chr2.2:51126658-51126677 MS.gene041354:intron 45.0%
ACCTGCCCAAGTTCATCATT+AGG + chr2.2:51123369-51123388 None:intergenic 45.0%
ACGGATAAGAAAGGGAGATG+AGG - chr2.2:51124549-51124568 MS.gene041354:intron 45.0%
ACTGTTACACTAGCCCATGT+TGG + chr2.2:51125478-51125497 None:intergenic 45.0%
AGATGTGGGGTTAAAGTGGT+AGG + chr2.2:51125044-51125063 None:intergenic 45.0%
AGGCAATGCACGAATCCATT+TGG - chr2.2:51126420-51126439 MS.gene041354:CDS 45.0%
AGGCTGAAACAAGGGAAATG+GGG + chr2.2:51122471-51122490 None:intergenic 45.0%
AGTATGAGAACAGGAAGGTG+TGG - chr2.2:51125394-51125413 MS.gene041354:intron 45.0%
CACTAGCCCATGTTGGATTT+AGG + chr2.2:51125471-51125490 None:intergenic 45.0%
CAGCCTTCCTTTCTTCACTT+GGG + chr2.2:51126699-51126718 None:intergenic 45.0%
CAGGACACAATATCCAACTG+GGG - chr2.2:51126065-51126084 MS.gene041354:intron 45.0%
CCTGCCCAAGTTCATCATTA+GGG + chr2.2:51123368-51123387 None:intergenic 45.0%
CTCCAATCCCAAGTGAAGAA+AGG - chr2.2:51126689-51126708 MS.gene041354:intron 45.0%
CTCCATAAGCTCGCATACTT+CGG + chr2.2:51123196-51123215 None:intergenic 45.0%
CTTTCTTCACTTGGGATTGG+AGG + chr2.2:51126691-51126710 None:intergenic 45.0%
GAGGCTGAAACAAGGGAAAT+GGG + chr2.2:51122472-51122491 None:intergenic 45.0%
GCTAGTACTTTCATCTGCAC+TGG + chr2.2:51123788-51123807 None:intergenic 45.0%
GCTGGACAACGGATAAGAAA+GGG - chr2.2:51124541-51124560 MS.gene041354:intron 45.0%
GTCACATATGCACACCAACA+AGG + chr2.2:51122722-51122741 None:intergenic 45.0%
GTGATCCTCAAAGGTTCATG+TGG - chr2.2:51124181-51124200 MS.gene041354:intron 45.0%
GTTTGCGCCATGGTTATTTG+TGG - chr2.2:51122375-51122394 MS.gene041354:CDS 45.0%
TAGGAAGATTGCATGCTTGG+TGG + chr2.2:51124995-51125014 None:intergenic 45.0%
TCAAGAGTTCTCGTAGCTTC+GGG + chr2.2:51127300-51127319 None:intergenic 45.0%
TCAGTTATTACACGGGTCCA+TGG + chr2.2:51125551-51125570 None:intergenic 45.0%
TCCTGTCCTTAAAACGCCAA+TGG + chr2.2:51124501-51124520 None:intergenic 45.0%
TCCTTAACCATTTGCCCTGA+GGG - chr2.2:51127069-51127088 MS.gene041354:intron 45.0%
TGCTGGACAACGGATAAGAA+AGG - chr2.2:51124540-51124559 MS.gene041354:intron 45.0%
TTAATGAGGCTACTCACCCT+TGG + chr2.2:51123287-51123306 None:intergenic 45.0%
TTCCTTAACCATTTGCCCTG+AGG - chr2.2:51127068-51127087 MS.gene041354:intron 45.0%
TTGTGAGAAGAAGGTGGAAC+CGG - chr2.2:51125626-51125645 MS.gene041354:intron 45.0%
! AAGGAAGGGCCAAATGGTTT+TGG - chr2.2:51123224-51123243 MS.gene041354:CDS 45.0%
! ATACGGATTTTCATCGCCAG+TGG - chr2.2:51125958-51125977 MS.gene041354:CDS 45.0%
! ATTGTGGGCTGATAGGATAC+AGG - chr2.2:51126046-51126065 MS.gene041354:intron 45.0%
! GGAGAAGTATGAGAACAGGA+AGG - chr2.2:51125389-51125408 MS.gene041354:intron 45.0%
!! CAGTTTCTGGTCTTGCTTAG+AGG + chr2.2:51126773-51126792 None:intergenic 45.0%
!! TTTCTGGTCTTGCTTAGAGG+TGG + chr2.2:51126770-51126789 None:intergenic 45.0%
!!! AGTTTTAGAGGATGTGCTGC+TGG - chr2.2:51125153-51125172 MS.gene041354:CDS 45.0%
!!! TCCATTGGCGTTTTAAGGAC+AGG - chr2.2:51124497-51124516 MS.gene041354:intron 45.0%
!! ATAAACAAAATAATAAATAT+AGG - chr2.2:51124955-51124974 MS.gene041354:intron 5.0%
!! TAAACAAAATAATAAATATA+GGG - chr2.2:51124956-51124975 MS.gene041354:intron 5.0%
AACAAGGGCCCGTTTACTTC+AGG + chr2.2:51127145-51127164 None:intergenic 50.0%
AACTGGACCTGAGACCTAAC+CGG - chr2.2:51124868-51124887 MS.gene041354:intron 50.0%
ACTGCCCACATGAACCTTTG+AGG + chr2.2:51124189-51124208 None:intergenic 50.0%
AGCTTCGGGTGATGAATCTG+TGG + chr2.2:51127286-51127305 None:intergenic 50.0%
CAAAGGTTCATGTGGGCAGT+AGG - chr2.2:51124189-51124208 MS.gene041354:intron 50.0%
CAATGCTAACCAATGCCCTC+AGG + chr2.2:51127087-51127106 None:intergenic 50.0%
CACCAGATGAACTGCAGAAC+CGG + chr2.2:51125648-51125667 None:intergenic 50.0%
CAGATGTGGGGTACATATGC+TGG + chr2.2:51125089-51125108 None:intergenic 50.0%
CAGCACGAACATTGCCAACA+TGG - chr2.2:51126650-51126669 MS.gene041354:intron 50.0%
CATATGCACACCAACAAGGC+CGG + chr2.2:51122718-51122737 None:intergenic 50.0%
CCAATGAAACCATGACCCGA+AGG + chr2.2:51124899-51124918 None:intergenic 50.0%
CCCTAATGATGAACTTGGGC+AGG - chr2.2:51123365-51123384 MS.gene041354:intron 50.0%
CCTTCGGGTCATGGTTTCAT+TGG - chr2.2:51124896-51124915 MS.gene041354:intron 50.0%
GATCTACAGGCTCCAACTAG+AGG + chr2.2:51123148-51123167 None:intergenic 50.0%
GCAGAAGTTCTATCGAGCAC+TGG - chr2.2:51126595-51126614 MS.gene041354:intron 50.0%
GCAGCCTTCCTTTCTTCACT+TGG + chr2.2:51126700-51126719 None:intergenic 50.0%
GGAGCCTCTCGTATTCACTA+TGG - chr2.2:51124771-51124790 MS.gene041354:intron 50.0%
GGAGGCTGAAACAAGGGAAA+TGG + chr2.2:51122473-51122492 None:intergenic 50.0%
GTCCGAAGTATGCGAGCTTA+TGG - chr2.2:51123191-51123210 MS.gene041354:intron 50.0%
GTCTTGCTCGTGATCCTCAA+AGG - chr2.2:51124172-51124191 MS.gene041354:intron 50.0%
GTGCAGATGTGGGGTTAAAG+TGG + chr2.2:51125048-51125067 None:intergenic 50.0%
TATGCTAACCGGTGCCCTTA+GGG - chr2.2:51126938-51126957 MS.gene041354:intron 50.0%
TGCCCTTAGGGCAATCGTTA+AGG - chr2.2:51126950-51126969 MS.gene041354:intron 50.0%
TGGGTCGCCACAAATAACCA+TGG + chr2.2:51122385-51122404 None:intergenic 50.0%
TGGTTCAACCAGTGCGATCA+CGG - chr2.2:51124916-51124935 MS.gene041354:intron 50.0%
TGTGGGGTACATATGCTGGA+AGG + chr2.2:51125085-51125104 None:intergenic 50.0%
TTATGCTAACCGGTGCCCTT+AGG - chr2.2:51126937-51126956 MS.gene041354:intron 50.0%
! AACCGGTTCTGCAGTTCATC+TGG - chr2.2:51125643-51125662 MS.gene041354:intron 50.0%
! ATGAGAACAGGAAGGTGTGG+AGG - chr2.2:51125397-51125416 MS.gene041354:intron 50.0%
! GACGGGAGAAGTATGAGAAC+AGG - chr2.2:51125385-51125404 MS.gene041354:intron 50.0%
! TACTCTTAAGCCGGCCTTGT+TGG - chr2.2:51122705-51122724 MS.gene041354:intron 50.0%
AAGTGGTAGGCTTGTGCGCT+CGG + chr2.2:51125031-51125050 None:intergenic 55.0%
ACCAATGCCCTCAGGGCAAA+TGG + chr2.2:51127079-51127098 None:intergenic 55.0%
GCCCTCAGGGCAAATGGTTA+AGG + chr2.2:51127073-51127092 None:intergenic 55.0%
TGAGGCTACTCACCCTTGGT+CGG + chr2.2:51123283-51123302 None:intergenic 55.0%
TGGCGACCCACTTACTCGTT+TGG - chr2.2:51122395-51122414 MS.gene041354:intron 55.0%
! AACGATTGCCCTAAGGGCAC+CGG + chr2.2:51126949-51126968 None:intergenic 55.0%
! ACCATTTGCCCTGAGGGCAT+TGG - chr2.2:51127075-51127094 MS.gene041354:intron 55.0%
! TGCATGCTTGGTGGCAACTC+TGG + chr2.2:51124986-51125005 None:intergenic 55.0%
!!! GGAGGAACTTTTGGAGCTGC+AGG - chr2.2:51123959-51123978 MS.gene041354:intron 55.0%
ACCTAACCGGCGAGACCTTC+GGG - chr2.2:51124881-51124900 MS.gene041354:intron 60.0%
CAGCTCAACCGTGATCGCAC+TGG + chr2.2:51124927-51124946 None:intergenic 60.0%
CAGTGCGATCACGGTTGAGC+TGG - chr2.2:51124925-51124944 MS.gene041354:intron 60.0%
CGAACCTCTTCGCCGACCAA+GGG - chr2.2:51123268-51123287 MS.gene041354:CDS 60.0%
GACCTAACCGGCGAGACCTT+CGG - chr2.2:51124880-51124899 MS.gene041354:intron 60.0%
TCGAACCTCTTCGCCGACCA+AGG - chr2.2:51123267-51123286 MS.gene041354:CDS 60.0%
CCATGACCCGAAGGTCTCGC+CGG + chr2.2:51124890-51124909 None:intergenic 65.0%
CTCACCCTTGGTCGGCGAAG+AGG + chr2.2:51123275-51123294 None:intergenic 65.0%
! ACCCGAAGGTCTCGCCGGTT+AGG + chr2.2:51124885-51124904 None:intergenic 65.0%
! GGTCTCGCCGGTTAGGTCTC+AGG + chr2.2:51124878-51124897 None:intergenic 65.0%
CCGGCGAGACCTTCGGGTCA+TGG - chr2.2:51124887-51124906 MS.gene041354:intron 70.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 51122368 51127331 51122368 ID=MS.gene041354
chr2.2 mRNA 51122368 51127331 51122368 ID=MS.gene041354.t1;Parent=MS.gene041354
chr2.2 exon 51127182 51127331 51127182 ID=MS.gene041354.t1.exon1;Parent=MS.gene041354.t1
chr2.2 CDS 51127182 51127331 51127182 ID=cds.MS.gene041354.t1;Parent=MS.gene041354.t1
chr2.2 exon 51126410 51126547 51126410 ID=MS.gene041354.t1.exon2;Parent=MS.gene041354.t1
chr2.2 CDS 51126410 51126547 51126410 ID=cds.MS.gene041354.t1;Parent=MS.gene041354.t1
chr2.2 exon 51126187 51126312 51126187 ID=MS.gene041354.t1.exon3;Parent=MS.gene041354.t1
chr2.2 CDS 51126187 51126312 51126187 ID=cds.MS.gene041354.t1;Parent=MS.gene041354.t1
chr2.2 exon 51125874 51126002 51125874 ID=MS.gene041354.t1.exon4;Parent=MS.gene041354.t1
chr2.2 CDS 51125874 51126002 51125874 ID=cds.MS.gene041354.t1;Parent=MS.gene041354.t1
chr2.2 exon 51125650 51125739 51125650 ID=MS.gene041354.t1.exon5;Parent=MS.gene041354.t1
chr2.2 CDS 51125650 51125739 51125650 ID=cds.MS.gene041354.t1;Parent=MS.gene041354.t1
chr2.2 exon 51125405 51125555 51125405 ID=MS.gene041354.t1.exon6;Parent=MS.gene041354.t1
chr2.2 CDS 51125405 51125555 51125405 ID=cds.MS.gene041354.t1;Parent=MS.gene041354.t1
chr2.2 exon 51125129 51125238 51125129 ID=MS.gene041354.t1.exon7;Parent=MS.gene041354.t1
chr2.2 CDS 51125129 51125238 51125129 ID=cds.MS.gene041354.t1;Parent=MS.gene041354.t1
chr2.2 exon 51123720 51123791 51123720 ID=MS.gene041354.t1.exon8;Parent=MS.gene041354.t1
chr2.2 CDS 51123720 51123791 51123720 ID=cds.MS.gene041354.t1;Parent=MS.gene041354.t1
chr2.2 exon 51123200 51123305 51123200 ID=MS.gene041354.t1.exon9;Parent=MS.gene041354.t1
chr2.2 CDS 51123200 51123305 51123200 ID=cds.MS.gene041354.t1;Parent=MS.gene041354.t1
chr2.2 exon 51122903 51123100 51122903 ID=MS.gene041354.t1.exon10;Parent=MS.gene041354.t1
chr2.2 CDS 51122903 51123100 51122903 ID=cds.MS.gene041354.t1;Parent=MS.gene041354.t1
chr2.2 exon 51122368 51122410 51122368 ID=MS.gene041354.t1.exon11;Parent=MS.gene041354.t1
chr2.2 CDS 51122368 51122410 51122368 ID=cds.MS.gene041354.t1;Parent=MS.gene041354.t1
Gene Sequence

>MS.gene041354

TTCAAAGGTTTGCGCCATGGTTATTTGTGGCGACCCACTTACTCGTTTGGTTTTTGTGCTGAAAACAAAGTACAACCTGTTAAAGCTTCTGTTGAAACTGCCCCATTTCCCTTGTTTCAGCCTCCTAAAGATGATGAAACAGCTTCTGAGGTAAAACCCATTTTGCACCTTGTTTGTTTATACTACTGTTTTTGGTTGTTGTTTATTTATTGGTTGAAAGTAACAACTAGGACTAAGGATTGTTAAATTAGCTTATATATGCAAAAGAATGTTACCTTTTTTGGGTGCATATGAGACCTTTTTGTTGGTGGGCATAAAGCGAGTGTTTTAGTGGTCTTACTCTTAAGCCGGCCTTGTTGGTGTGCATATGTGACATGATACGGATATTGACATGTAGACACCTATAATTTTATAAGATGAAATTGATTGTATATAAACACACATGTCAATGTCGTGTCAATGTCAGACACTCGAACATGCCTTCAATTTAAAGTCTCGCTACTACATAATTGTTCAGAGTTTTCTACAATTTCAAAGATTGCAACAAAACATTGACTGTGATTATAATTTAAAATGTTGGATGTTTCAATAATGAGATGTGCTTTTGTGTGTGTAATAGATAGAGTAAAGTTAATTTTGAGATGCAATATCTTCATTCCTATAAGGCCAGTTTTTGGATGAATTCTTTAAAGGGTCTTCTGTTTTTATGAGATTGAGATATTTAGTTGTGATATGGATTCTGTTTTCTCTTTGTTTCTTCGTGTTAATTTATTTGTTCCTCTAGTTGGAGCCTGTAGATCCTGATTTCTACAAGATAGGATTCGTCCGAAGTATGCGAGCTTATGGAGTTGATTTTAAGGAAGGGCCAAATGGTTTTGGTGTATATGCTTCTAAAGATGTCGAACCTCTTCGCCGACCAAGGGTGAGTAGCCTCATTAATTATTTGTATAATGCTCTTTATGATTATATTCTGAGTAGTTGTCCATATGGCTGTTTTCCCTAATGATGAACTTGGGCAGGTTATAATGGAAATTCCTCTTGAATTGATGCTAACCATAAGCAAGAAATTACCATGGATGTTTTTCCCTGATATAATTCCCCTTGGTCATCCAATATTTGATATTATCAACTCAACAAATCCAGAGGTAATTGCAATCATCCTCTAAAGTCATTAGTTCAAAATATGATATAATCGATTTCTTGATTGTTTTCATGATAAAATAATATGTTGATACTCAAAAAAGTAACTGTTGTATATACTTAAAAAAGTAAAAAACGTTGGTTTTTCTAGTTATCTGCTTAATGTAATTGTGTAAATCTTTGTGGCAGACAGATTGGGATTTACGATTAGCATGCCTTCTCTTGTTTTCATTTGACTGCAAAGACAACTTTTGGCAGTATTACGGCGATTTCTTACCCAGTGCAGATGAAAGTACTAGCTTACTTCTAGCTACAGAGGTGCGTAAAAAATAGATTTTTTTATCATTAAACCATTGATTGATATTTAGCTAACATCAGATGTAGCTACATTTGGAACATACCACAGTTTTAGAATCCACTTTACGACATCTCATGTTGATTTGTATATCTAGGAGGAACTTTTGGAGCTGCAGGATCCCGATCTTGCTTCTACAATGAGAGTTCAGCAACAACGAGCGTTAGAATTCTGGGAGAAGAACTGGGTAGAGAGAAAACTGTCCTTGTTGAAATTTTTTGTCTTCTATGATGCATATCACTTAGTTTTTGTTCTCAACAAATGGTGTTAATCTTGTTCAGCATAGTGGTGCACCGCTCAAAGTAAAACGTCTTGCTCGTGATCCTCAAAGGTTCATGTGGGCAGTAGGAATTGCACAGTCACGATGTATCAACATGCAAATGAGAATGTGTGCACTAACTCAACAAGCGAATATGCTGATTCCTTATGCTGGTAAGCTTTGTTCACCTCAAATGGTCTAACCAACTATTCTATCATTTTCGTACTCATGCATAGTAGCGGTTCTTGTTTTTTTTTTTTACATTTGATGTAAAGTTTTTCTTTCCTTTTTGATAAAATAACAACAGAGGTAACTGATTAACTTAGTCTTGCTTTTCAGATATGCTGAACCATTCGTTTGAGCCAAATTGTTTTTTCCATTGGCGTTTTAAGGACAGGATGCTTGAGGTTCTTATAAATGCTGGACAACGGATAAGAAAGGGAGATGAGGTAAATCACTTTATACTTTTGTGAAGTATGCTTTTCGTGATTCCTTCCTTATATTAGACGTTACTTGTGCAGATTTTGTTTTTCTTCTTATAATATTGATTGTCCCAAACTAGATAGACTTTTTGTGCAGGAAGGTAGTAAAAATATAGACGGATAGAGTGCATGTCAGATTTTCAACGTAGGCTAGTATAAAGGAACTAGGAGCCTCTCGTATTCACTATGGCTATACATAGAATGTTTTCTCTTATTGTATGAATTTCACATCCGTGTATATGTGGTAATGATCAATGTTTTAAAAACTGGACCTGAGACCTAACCGGCGAGACCTTCGGGTCATGGTTTCATTGGTTCAACCAGTGCGATCACGGTTGAGCTGGATAATTAATAAACAAAATAATAAATATAGGGCTCACCAGAGTTGCCACCAAGCATGCAATCTTCCTAAAGAAAAGAAACACCGAGCGCACAAGCCTACCACTTTAACCCCACATCTGCACACAAATATACTAAGCCTTCCAGCATATGTACCCCACATCTGACCAAATAAATGCAGGCACTTTTGTTGCAGAAATTATGAGATATAGTTTTAGAGGATGTGCTGCTGGTTATGACACTTGATGTACTGAATAAAGGAGTAGAAATTACTATCAACTGCACTTCGTTACACAACATTGAAGCTAATCGTCGCTGGTTTCAAAGTGCTGTATTCCTCCGTTAAATCTATCATAATTTTTTTTCTTTCTACTTTGAATAGTGAAATCTAAAATGACTTGAAACATGTGAAAACAAGAAAGAAATATTAAGCATATTTGTGGACGGGAGAAGTATGAGAACAGGAAGGTGTGGAGGCACATGCAACACACAAGAAACAGAAGGGTTACTGTGAGCCTGTTGTTGCCTAAATCCAACATGGGCTAGTGTAACAGTGTAATAAAGCTGTTAACGTTATAAAAGGAAATGACTTCTCTGATATCTAACCATGGACCCGTGTAATAACTGATTAAGAAATGCACGAGAGTGAGAATAATTATGGAGTTTTCCTTAAAAATCAAGTTTTGTGAGAAGAAGGTGGAACCGGTTCTGCAGTTCATCTGGTGTTTCTACCAGTTTTTTTTTCTACCTAACAGTTTTTAATGATCTAGTCATAATCTAAGTGACATAGGAGTGTTATTGTTTAGAAGCTTGAAAACTAATTGGATAGTTTTTCAATGCTTTTAGAGCATACATGCTTTTAAGTTAGTGAAACTAATTTTTTTCCTAGCATGTTTAAATTACCATTTGTATTATTTCATTGTGTGACATGGATATCCTAATTATATTGTCCAAAATTCTAACAGATGACAGTTGATTACATGAGCGCACAGAAGAACGACATGTTAATGCAAAGATACGGATTTTCATCGCCAGTGGTAACTTTCTTTTTATACTAAATCTTTTTGAAAGGAAAGTTCTGTTTATGCTCTTTGTATTAAAAAATTGTGGGCTGATAGGATACAGGACACAATATCCAACTGGGGATGTCTGAAATATTTAAAAGTTATAAGACATGGCACAACTATAATACCACATTCTTACCTAAATATAGGTCCTCATCGACTAAACTATGAGCATTAAGGAAGTCTGTATTGGTTTAAAATTTGTTAACATGTATTATTTTTGTATGCTCATTGTCACCATATATGTGCAGTTGCTTCTTTGAAGTATTTTCATTATACTGTTCTTTCATTATTCTTTGATGAATAATTCATTTAAACTTATACATGTTTGCCATTTGGTCCACTGAGTTTTTAAAATTTAGTTCTCAAACTCACTTAAATATGCAGAATCCTTGGGATGTGATCAAATTCTCAGGCAATGCACGAATCCATTTGGATTCTTTCTTGTCAGTCTTCAACATATCTGGCCTTCCTGAAGAGTATTATCGTAACGGTATGGTCAATATTATTTTAAATTCTAGAATCTACTTTCTTGCACATTTCTCTTTTCAAATCGGAATTATTTAGGATATCAGTATGAAATTCTTAGCAGAAGTTCTATCGAGCACTGGAGATACTTTTGTTGATGGAGCTGTCATAGCTGCAGCACGAACATTGCCAACATGGTCAGATGGAGATGTACCTCCAATCCCAAGTGAAGAAAGGAAGGCTGCGAAAGCATTACAACAAGAGTGCAAACAAATGCTTGCAGAATTCGCTACCACCTCTAAGCAAGACCAGAAACTGTTAGGTAATTCAGTGTTCTTATCTTGATACTAGAAAGAAAGTAGAAACATGACACTGATTGTCATTGAATTTCCATGACAATTAGTGTCATGTTTCTCCTTTTAAAATTCTTTCAAAATGTCGTTCTAATATTTACTTTATGGGTTATGCTAACCGGTGCCCTTAGGGCAATCGTTAAGGAAACCCAAAAAAGAAAGTTTTAAGTTGAAAATACCACTTTTTAAACTTTTGAGAAGTTGAATGCACAAGTTCCAATGCGAGATTACTATATTTGCTTCCTTAACCATTTGCCCTGAGGGCATTGGTTAGCATTGCCCTTACTTTATTGGTGGACTAGAAACATGAATCGCCTGAAGTAAACGGGCCCTTGTTTTTCGCAAAATGACTGTTGTGCAGTTGATTACTAGACTTTGCTTTTATGATAAGTATTTTTTTTATGATCCTTATACGATAAAAAAAGCTAAACTAATCCTTAGCTTTCGTTTAATGACCACAGATTCATCACCCGAAGCTACGAGAACTCTTGAAGCTGCAATAAA
Protein sequence

>MS.gene041354.t1

FKGLRHGYLWRPTYSFGFCAENKVQPVKASVETAPFPLFQPPKDDETASELEPVDPDFYKIGFVRSMRAYGVDFKEGPNGFGVYASKDVEPLRRPRVIMEIPLELMLTISKKLPWMFFPDIIPLGHPIFDIINSTNPETDWDLRLACLLLFSFDCKDNFWQYYGDFLPSADESTSLLLATEEELLELQDPDLASTMRVQQQRALEFWEKNWHSGAPLKVKRLARDPQRFMWAVGIAQSRCINMQMRMCALTQQANMLIPYADMLNHSFEPNCFFHWRFKDRMLEVLINAGQRIRKGDEMTVDYMSAQKNDMLMQRYGFSSPVNPWDVIKFSGNARIHLDSFLSVFNISGLPEEYYRNEVLSSTGDTFVDGAVIAAARTLPTWSDGDVPPIPSEERKAAKALQQECKQMLAEFATTSKQDQKLLDSSPEATRTLEAAI