AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene041355

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041355.t1 MTR_2g035660 97.712 437 10 0 1 437 18 454 0.0 895
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041355.t1 AT4G20130 72.494 429 115 3 11 437 30 457 0.0 651
MS.gene041355.t1 AT4G20130 74.631 339 85 1 99 437 1 338 0.0 544
MS.gene041355.t1 AT4G20130 74.631 339 85 1 99 437 1 338 0.0 544

Find 93 sgRNAs with CRISPR-Local

Find 311 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGAATTACCTAACAGTTTC+TGG 0.135526 2.2:+51109185 None:intergenic
CCATGGTAATTTCTTGCTTA+TGG 0.197935 2.2:+51112546 None:intergenic
GAAGCTGTTTCATCATCTTT+AGG 0.257907 2.2:+51113476 None:intergenic
TTGTCAGTCTTCAACATATC+TGG 0.279113 2.2:-51109517 MS.gene041355:CDS
GTATATCTAGGAGGAACTTT+TGG 0.297229 2.2:-51112017 MS.gene041355:intron
CAGTTTCTGGTCTTGCTTAG+AGG 0.304127 2.2:+51109198 None:intergenic
GTCCGAAGTATGCGAGCTTA+TGG 0.311545 2.2:-51112776 MS.gene041355:CDS
AAGGAAGGGCCAAATGGTTT+TGG 0.316532 2.2:-51112743 MS.gene041355:CDS
AACAACGAGCGTTAGAATTC+TGG 0.322289 2.2:-51111952 MS.gene041355:CDS
TGACCAAGGGGAATTATATC+AGG 0.327820 2.2:+51112514 None:intergenic
TTCAAGAGTTCTCGTAGCTT+CGG 0.331867 2.2:+51108670 None:intergenic
TTCCTTTCTTCACTTGGGAT+TGG 0.339331 2.2:+51109277 None:intergenic
TGAACTTGGGCAGGTTATAA+TGG 0.358603 2.2:-51112593 MS.gene041355:intron
GCAGCCTTCCTTTCTTCACT+TGG 0.361561 2.2:+51109271 None:intergenic
TAGAATTCTGGGAGAAGAAC+TGG 0.366779 2.2:-51111940 MS.gene041355:CDS
TGGCGACCCACTTACTCGTT+TGG 0.373384 2.2:-51113572 MS.gene041355:CDS
TTGACTGCAAAGACAACTTT+TGG 0.380436 2.2:-51112227 MS.gene041355:CDS
AATCTTTGTGGCAGACAGAT+TGG 0.384792 2.2:-51112284 MS.gene041355:intron
GTTTCAACAGAAGCTTTAAC+AGG 0.387453 2.2:+51113524 None:intergenic
AGGCAATGCACGAATCCATT+TGG 0.393759 2.2:-51109548 MS.gene041355:CDS
ACTTAAATATGCAGAATCCT+TGG 0.397663 2.2:-51109588 MS.gene041355:intron
AATCCTATCTTGTAGAAATC+AGG 0.398262 2.2:+51112800 None:intergenic
GATCCTGATTTCTACAAGAT+AGG 0.398743 2.2:-51112803 MS.gene041355:CDS
CCGTTACGATAATACTCTTC+AGG 0.400533 2.2:+51109490 None:intergenic
CTTTCTTCACTTGGGATTGG+AGG 0.404062 2.2:+51109280 None:intergenic
AAGCAAGACCAGAAACTGTT+AGG 0.413582 2.2:-51109193 MS.gene041355:intron
ATCTTTGTGGCAGACAGATT+GGG 0.429709 2.2:-51112283 MS.gene041355:intron
GAGGCTGAAACAAGGGAAAT+GGG 0.430134 2.2:+51113498 None:intergenic
GAGTTGATAATATCAAATAT+TGG 0.430427 2.2:+51112490 None:intergenic
CTTAAATATGCAGAATCCTT+GGG 0.431199 2.2:-51109587 MS.gene041355:intron
TCAAGAGTTCTCGTAGCTTC+GGG 0.432228 2.2:+51108671 None:intergenic
CTTGAGGTTCTTATAAATGC+TGG 0.434356 2.2:-51111445 MS.gene041355:CDS
GGAGGCTGAAACAAGGGAAA+TGG 0.441003 2.2:+51113497 None:intergenic
CAGCCTTCCTTTCTTCACTT+GGG 0.444382 2.2:+51109272 None:intergenic
GCTAGTACTTTCATCTGCAC+TGG 0.452982 2.2:+51112182 None:intergenic
TTCCCTGATATAATTCCCCT+TGG 0.459258 2.2:-51112517 MS.gene041355:CDS
TTGTAGAAATCAGGATCTAC+AGG 0.465598 2.2:+51112809 None:intergenic
CTCCATAAGCTCGCATACTT+CGG 0.475886 2.2:+51112774 None:intergenic
ACTGCCCACATGAACCTTTG+AGG 0.479039 2.2:+51111782 None:intergenic
GTTTGCGCCATGGTTATTTG+TGG 0.479861 2.2:-51113592 MS.gene041355:CDS
ACAACGAGCGTTAGAATTCT+GGG 0.481989 2.2:-51111951 MS.gene041355:CDS
GAACAAAGCTTACCAGCATA+AGG 0.490671 2.2:+51111683 None:intergenic
AACAATTTGGCTCAAACGAA+TGG 0.492685 2.2:+51111497 None:intergenic
CTGACAAGAAAGAATCCAAA+TGG 0.492742 2.2:+51109533 None:intergenic
GCATATACACCAAAACCATT+TGG 0.494211 2.2:+51112734 None:intergenic
TCTCATTGTAGAAGCAAGAT+CGG 0.504225 2.2:+51111982 None:intergenic
TGGGATGTGATCAAATTCTC+AGG 0.506817 2.2:-51109568 MS.gene041355:CDS
ATCAAATATTGGATGACCAA+GGG 0.508658 2.2:+51112501 None:intergenic
CTCCAATCCCAAGTGAAGAA+AGG 0.512257 2.2:-51109279 MS.gene041355:CDS
TCTTTAGGAGGCTGAAACAA+GGG 0.516914 2.2:+51113491 None:intergenic
CAGTTCAAAGGTTTGCGCCA+TGG 0.522935 2.2:-51113602 MS.gene041355:CDS
GTTAATCTTGTTCAGCATAG+TGG 0.526606 2.2:-51111839 MS.gene041355:intron
TGCTGGACAACGGATAAGAA+AGG 0.527485 2.2:-51111428 MS.gene041355:CDS
CTCATTGTAGAAGCAAGATC+GGG 0.528009 2.2:+51111983 None:intergenic
TTACTTTCTAAACAGTTCAA+AGG 0.544119 2.2:-51113614 None:intergenic
TCGAACCTCTTCGCCGACCA+AGG 0.545300 2.2:-51112700 MS.gene041355:CDS
AATATGCTGATTCCTTATGC+TGG 0.547916 2.2:-51111695 MS.gene041355:intron
CAAAGGTTCATGTGGGCAGT+AGG 0.553144 2.2:-51111779 MS.gene041355:CDS
GCAGAAGTTCTATCGAGCAC+TGG 0.557263 2.2:-51109373 MS.gene041355:intron
CAGCACGAACATTGCCAACA+TGG 0.557449 2.2:-51109318 MS.gene041355:CDS
GCTGTTTCATCATCTTTAGG+AGG 0.562065 2.2:+51113479 None:intergenic
GCTGGACAACGGATAAGAAA+GGG 0.563259 2.2:-51111427 MS.gene041355:CDS
AGATGATGAAACAGCTTCTG+AGG 0.564802 2.2:-51113471 MS.gene041355:intron
CTCACCCTTGGTCGGCGAAG+AGG 0.565363 2.2:+51112695 None:intergenic
GACATGTTAATGCAAAGATA+CGG 0.568057 2.2:-51110027 MS.gene041355:CDS
CTAGTACTTTCATCTGCACT+GGG 0.569363 2.2:+51112183 None:intergenic
TCCTGTCCTTAAAACGCCAA+TGG 0.569618 2.2:+51111470 None:intergenic
TTTCTGGTCTTGCTTAGAGG+TGG 0.573797 2.2:+51109201 None:intergenic
GTGATCCTCAAAGGTTCATG+TGG 0.575415 2.2:-51111787 MS.gene041355:CDS
GAGAATTTGATCACATCCCA+AGG 0.578387 2.2:+51109571 None:intergenic
GTCTTGCTCGTGATCCTCAA+AGG 0.578672 2.2:-51111796 MS.gene041355:CDS
ATCTTTAGGAGGCTGAAACA+AGG 0.580488 2.2:+51113490 None:intergenic
TATCAAATATTGGATGACCA+AGG 0.581735 2.2:+51112500 None:intergenic
AGTCAAATGAAAACAAGAGA+AGG 0.583863 2.2:+51112244 None:intergenic
AATCCCAAGTGAAGAAAGGA+AGG 0.592614 2.2:-51109275 MS.gene041355:CDS
CCTGAAGAGTATTATCGTAA+CGG 0.595528 2.2:-51109490 MS.gene041355:intron
ATGGTTAGCATCAATTCAAG+AGG 0.596700 2.2:+51112565 None:intergenic
CGAACCTCTTCGCCGACCAA+GGG 0.606118 2.2:-51112699 MS.gene041355:intron
GACCAAGGGGAATTATATCA+GGG 0.608421 2.2:+51112515 None:intergenic
TGAGGCTACTCACCCTTGGT+CGG 0.610693 2.2:+51112687 None:intergenic
AGGCTGAAACAAGGGAAATG+GGG 0.620587 2.2:+51113499 None:intergenic
TCAAATATTGGATGACCAAG+GGG 0.620822 2.2:+51112502 None:intergenic
ACATTGCCAACATGGTCAGA+TGG 0.621351 2.2:-51109310 MS.gene041355:CDS
AGAATTCTGGGAGAAGAACT+GGG 0.626608 2.2:-51111939 MS.gene041355:intron
TTCTTATAAATGCTGGACAA+CGG 0.630290 2.2:-51111438 MS.gene041355:CDS
ACATCTCCATCTGACCATGT+TGG 0.640415 2.2:+51109304 None:intergenic
TACGATAATACTCTTCAGGA+AGG 0.641879 2.2:+51109494 None:intergenic
ACGGATAAGAAAGGGAGATG+AGG 0.666436 2.2:-51111419 MS.gene041355:intron
TAGCTTACTTCTAGCTACAG+AGG 0.670222 2.2:-51112163 MS.gene041355:intron
TGATCCTCAAAGGTTCATGT+GGG 0.670337 2.2:-51111786 MS.gene041355:CDS
CCATAAGCAAGAAATTACCA+TGG 0.675291 2.2:-51112546 MS.gene041355:CDS
TATCAACTCAACAAATCCAG+AGG 0.680162 2.2:-51112476 MS.gene041355:intron
TGGGTCGCCACAAATAACCA+TGG 0.693090 2.2:+51113585 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTATGATAGATTTAA+CGG + chr2.2:51111575-51111594 None:intergenic 10.0%
!! ATTTCATCTTATAAAATTAT+AGG + chr2.2:51109062-51109081 None:intergenic 10.0%
!! CATTATACAAATAATTAATG+AGG + chr2.2:51109592-51109611 None:intergenic 15.0%
!! TATTTAAAAGTTATAAGACA+TGG - chr2.2:51112388-51112407 MS.gene041355:intron 15.0%
!! TCTTTGTATTAAAAAATTGT+GGG - chr2.2:51112321-51112340 MS.gene041355:intron 15.0%
!!! AACTTAAAACTTTCTTTTTT+GGG + chr2.2:51113269-51113288 None:intergenic 15.0%
!!! CATTTTGAAAGAATTTTAAA+AGG + chr2.2:51113183-51113202 None:intergenic 15.0%
!!! GTGATTATAATTTAAAATGT+TGG - chr2.2:51109216-51109235 MS.gene041355:CDS 15.0%
!!! TTATACTAAATCTTTTTGAA+AGG - chr2.2:51112282-51112301 MS.gene041355:intron 15.0%
!! ACACAATGAAATAATACAAA+TGG + chr2.2:51112138-51112157 None:intergenic 20.0%
!! AGAAATATTAAGCATATTTG+TGG - chr2.2:51111653-51111672 MS.gene041355:intron 20.0%
!! CGTTCTAATATTTACTTTAT+GGG - chr2.2:51113204-51113223 MS.gene041355:intron 20.0%
!! CTCTTTGTATTAAAAAATTG+TGG - chr2.2:51112320-51112339 MS.gene041355:intron 20.0%
!! CTTAAAAAAGTAAAAAACGT+TGG - chr2.2:51109918-51109937 MS.gene041355:intron 20.0%
!! TCGTTCTAATATTTACTTTA+TGG - chr2.2:51113203-51113222 MS.gene041355:intron 20.0%
!! TTTCTTAATCAGTTATTACA+CGG + chr2.2:51111849-51111868 None:intergenic 20.0%
!!! AAAAGAATGTTACCTTTTTT+GGG - chr2.2:51108921-51108940 MS.gene041355:intron 20.0%
!!! ATGATCAATGTTTTAAAAAC+TGG - chr2.2:51111141-51111160 MS.gene041355:intron 20.0%
!!! ATTATGAGATATAGTTTTAG+AGG - chr2.2:51111431-51111450 MS.gene041355:CDS 20.0%
!!! CAACTTAAAACTTTCTTTTT+TGG + chr2.2:51113270-51113289 None:intergenic 20.0%
!!! CTGTTGTTATTTTATCAAAA+AGG + chr2.2:51110699-51110718 None:intergenic 20.0%
!!! GAATTTTGGACAATATAATT+AGG + chr2.2:51112172-51112191 None:intergenic 20.0%
!!! GAGTTGATAATATCAAATAT+TGG + chr2.2:51109771-51109790 None:intergenic 20.0%
!!! TTAGCTTTTTTTATCGTATA+AGG + chr2.2:51113527-51113546 None:intergenic 20.0%
!!! TTTGGTTGTTGTTTATTTAT+TGG - chr2.2:51108849-51108868 MS.gene041355:intron 20.0%
!!! TTTGTTTATACTACTGTTTT+TGG - chr2.2:51108831-51108850 MS.gene041355:intron 20.0%
!!! TTTTCAAATCGGAATTATTT+AGG - chr2.2:51112842-51112861 MS.gene041355:intron 20.0%
!!! TTTTGATAAAATAACAACAG+AGG - chr2.2:51110699-51110718 MS.gene041355:intron 20.0%
!!! TTTTGGATGAATTCTTTAAA+GGG - chr2.2:51109330-51109349 MS.gene041355:CDS 20.0%
!!! TTTTTGGATGAATTCTTTAA+AGG - chr2.2:51109329-51109348 MS.gene041355:CDS 20.0%
! AAAGCTGTTAACGTTATAAA+AGG - chr2.2:51111793-51111812 MS.gene041355:CDS 25.0%
! AACAGTAGTATAAACAAACA+AGG + chr2.2:51108829-51108848 None:intergenic 25.0%
! AATGGTAATTTAAACATGCT+AGG + chr2.2:51112120-51112139 None:intergenic 25.0%
! AATTATGATAGATTTAACGG+AGG + chr2.2:51111572-51111591 None:intergenic 25.0%
! AATTTATTTGTTCCTCTAGT+TGG - chr2.2:51109424-51109443 MS.gene041355:intron 25.0%
! AGAAGACAAAAATTTCAACA+AGG + chr2.2:51110360-51110379 None:intergenic 25.0%
! ATATTAAGCATATTTGTGGA+CGG - chr2.2:51111657-51111676 MS.gene041355:intron 25.0%
! CTAGATCATTAAAAACTGTT+AGG + chr2.2:51111983-51112002 None:intergenic 25.0%
! CTTCTCAAAAGTTTAAAAAG+TGG + chr2.2:51113299-51113318 None:intergenic 25.0%
! GAAGGTAGTAAAAATATAGA+CGG - chr2.2:51110991-51111010 MS.gene041355:intron 25.0%
! GTTAGCTAAATATCAATCAA+TGG + chr2.2:51110152-51110171 None:intergenic 25.0%
! TAAAGAATTCATCCAAAAAC+TGG + chr2.2:51109328-51109347 None:intergenic 25.0%
! TACGAAAATGATAGAATAGT+TGG + chr2.2:51110617-51110636 None:intergenic 25.0%
! TATAAAAAGAAAGTTACCAC+TGG + chr2.2:51112267-51112286 None:intergenic 25.0%
! TATTATTTCATTGTGTGACA+TGG - chr2.2:51112142-51112161 MS.gene041355:intron 25.0%
! TGAGATATTTAGTTGTGATA+TGG - chr2.2:51109372-51109391 MS.gene041355:CDS 25.0%
! TGTAATTGTGTAAATCTTTG+TGG - chr2.2:51109962-51109981 MS.gene041355:intron 25.0%
! TGTTAGGTAGAAAAAAAAAC+TGG + chr2.2:51111967-51111986 None:intergenic 25.0%
! TTAGAAGCTTGAAAACTAAT+TGG - chr2.2:51112035-51112054 MS.gene041355:intron 25.0%
! TTCTTAATCAGTTATTACAC+GGG + chr2.2:51111848-51111867 None:intergenic 25.0%
!! ACAAAAAGTCTATCTAGTTT+GGG + chr2.2:51110967-51110986 None:intergenic 25.0%
!! CTCACAAAACTTGATTTTTA+AGG + chr2.2:51111903-51111922 None:intergenic 25.0%
!! TAGTTTTTGTTCTCAACAAA+TGG - chr2.2:51110395-51110414 MS.gene041355:intron 25.0%
!! TTTTGAACTAATGACTTTAG+AGG + chr2.2:51109821-51109840 None:intergenic 25.0%
!!! CAAAAGAATGTTACCTTTTT+TGG - chr2.2:51108920-51108939 MS.gene041355:intron 25.0%
!!! TCATGTTGATTTGTATATCT+AGG - chr2.2:51110229-51110248 MS.gene041355:intron 25.0%
AAACAAACAAGGTGCAAAAT+GGG + chr2.2:51108818-51108837 None:intergenic 30.0%
AAACATGACACTAATTGTCA+TGG + chr2.2:51113158-51113177 None:intergenic 30.0%
AATCCTATCTTGTAGAAATC+AGG + chr2.2:51109461-51109480 None:intergenic 30.0%
ACACTTGATGTACTGAATAA+AGG - chr2.2:51111471-51111490 MS.gene041355:CDS 30.0%
ACTTAAATATGCAGAATCCT+TGG - chr2.2:51112670-51112689 MS.gene041355:intron 30.0%
ACTTATACATGTTTGCCATT+TGG - chr2.2:51112613-51112632 MS.gene041355:intron 30.0%
AGTAACGTCTAATATAAGGA+AGG + chr2.2:51110906-51110925 None:intergenic 30.0%
AGTCAAATGAAAACAAGAGA+AGG + chr2.2:51110017-51110036 None:intergenic 30.0%
AGTCATAATCTAAGTGACAT+AGG - chr2.2:51112001-51112020 MS.gene041355:CDS 30.0%
ATCAAATATTGGATGACCAA+GGG + chr2.2:51109760-51109779 None:intergenic 30.0%
ATTGGTTGAAAGTAACAACT+AGG - chr2.2:51108867-51108886 MS.gene041355:intron 30.0%
CAAATATAGTAATCTCGCAT+TGG + chr2.2:51113337-51113356 None:intergenic 30.0%
CACAAAAAGTCTATCTAGTT+TGG + chr2.2:51110968-51110987 None:intergenic 30.0%
CACAAGTAACGTCTAATATA+AGG + chr2.2:51110910-51110929 None:intergenic 30.0%
CCACATTCTTACCTAAATAT+AGG - chr2.2:51112424-51112443 MS.gene041355:intron 30.0%
CCTATATTTAGGTAAGAATG+TGG + chr2.2:51112427-51112446 None:intergenic 30.0%
CTTAAATATGCAGAATCCTT+GGG - chr2.2:51112671-51112690 MS.gene041355:intron 30.0%
GACATGTTAATGCAAAGATA+CGG - chr2.2:51112231-51112250 MS.gene041355:CDS 30.0%
GCAATATCTTCATTCCTATA+AGG - chr2.2:51109302-51109321 MS.gene041355:CDS 30.0%
TAAACAAACAAGGTGCAAAA+TGG + chr2.2:51108819-51108838 None:intergenic 30.0%
TATCAAATATTGGATGACCA+AGG + chr2.2:51109761-51109780 None:intergenic 30.0%
TATTAAGCATATTTGTGGAC+GGG - chr2.2:51111658-51111677 MS.gene041355:intron 30.0%
TGATCATTACCACATATACA+CGG + chr2.2:51111128-51111147 None:intergenic 30.0%
TTCTTATAAATGCTGGACAA+CGG - chr2.2:51110820-51110839 MS.gene041355:intron 30.0%
! ACTGTCATCTGTTAGAATTT+TGG + chr2.2:51112186-51112205 None:intergenic 30.0%
! GCACATTTCTCTTTTCAAAT+CGG - chr2.2:51112831-51112850 MS.gene041355:intron 30.0%
! TTAAAAAATTGTGGGCTGAT+AGG - chr2.2:51112329-51112348 MS.gene041355:intron 30.0%
! TTTTCCCTAATGATGAACTT+GGG - chr2.2:51109652-51109671 MS.gene041355:intron 30.0%
!! AATCAAGTTTTGTGAGAAGA+AGG - chr2.2:51111907-51111926 MS.gene041355:intron 30.0%
!! AGCTTATGGAGTTGATTTTA+AGG - chr2.2:51109496-51109515 MS.gene041355:CDS 30.0%
!! AGTCATTTTGCGAAAAACAA+GGG + chr2.2:51113450-51113469 None:intergenic 30.0%
!! ATGGAGTTGATTTTAAGGAA+GGG - chr2.2:51109501-51109520 MS.gene041355:CDS 30.0%
!! TAAAGTGGATTCTAAAACTG+TGG + chr2.2:51110202-51110221 None:intergenic 30.0%
!! TATGGAGTTGATTTTAAGGA+AGG - chr2.2:51109500-51109519 MS.gene041355:CDS 30.0%
!! TGTTGATTTGTATATCTAGG+AGG - chr2.2:51110232-51110251 MS.gene041355:intron 30.0%
!!! AGCCAAATTGTTTTTTCCAT+TGG - chr2.2:51110772-51110791 MS.gene041355:intron 30.0%
!!! TTTTTTCCATTGGCGTTTTA+AGG - chr2.2:51110782-51110801 MS.gene041355:intron 30.0%
AAGAAGCAACTGCACATATA+TGG + chr2.2:51112537-51112556 None:intergenic 35.0%
ACAAAAACCAAACGAGTAAG+TGG + chr2.2:51108696-51108715 None:intergenic 35.0%
ACATCAGATGTAGCTACATT+TGG - chr2.2:51110170-51110189 MS.gene041355:intron 35.0%
ACATCTGACCAAATAAATGC+AGG - chr2.2:51111392-51111411 MS.gene041355:intron 35.0%
ACTTCTCTGATATCTAACCA+TGG - chr2.2:51111821-51111840 MS.gene041355:CDS 35.0%
AGCATTAAGGAAGTCTGTAT+TGG - chr2.2:51112467-51112486 MS.gene041355:intron 35.0%
AGTATATTTGTGTGCAGATG+TGG + chr2.2:51111349-51111368 None:intergenic 35.0%
ATAGTTGGTTAGACCATTTG+AGG + chr2.2:51110602-51110621 None:intergenic 35.0%
ATATCAGGGAAAAACATCCA+TGG + chr2.2:51109732-51109751 None:intergenic 35.0%
ATGGTTAGCATCAATTCAAG+AGG + chr2.2:51109696-51109715 None:intergenic 35.0%
ATTCTGAGTAGTTGTCCATA+TGG - chr2.2:51109626-51109645 MS.gene041355:intron 35.0%
ATTTCACATCCGTGTATATG+TGG - chr2.2:51111116-51111135 MS.gene041355:intron 35.0%
CAAAAACCAAACGAGTAAGT+GGG + chr2.2:51108695-51108714 None:intergenic 35.0%
CACGAGAGTGAGAATAATTA+TGG - chr2.2:51111871-51111890 MS.gene041355:intron 35.0%
CATTTATTTGGTCAGATGTG+GGG + chr2.2:51111391-51111410 None:intergenic 35.0%
CCATAAGCAAGAAATTACCA+TGG - chr2.2:51109712-51109731 MS.gene041355:intron 35.0%
CCATGGTAATTTCTTGCTTA+TGG + chr2.2:51109715-51109734 None:intergenic 35.0%
CGACTAAACTATGAGCATTA+AGG - chr2.2:51112454-51112473 MS.gene041355:intron 35.0%
CGCCAATGGAAAAAACAATT+TGG + chr2.2:51110777-51110796 None:intergenic 35.0%
CTAGTCCACCAATAAAGTAA+GGG + chr2.2:51113400-51113419 None:intergenic 35.0%
CTGAATTACCTAACAGTTTC+TGG + chr2.2:51113076-51113095 None:intergenic 35.0%
CTGACAAGAAAGAATCCAAA+TGG + chr2.2:51112728-51112747 None:intergenic 35.0%
CTTGAGGTTCTTATAAATGC+TGG - chr2.2:51110813-51110832 MS.gene041355:intron 35.0%
GAAAGTAACAACTAGGACTA+AGG - chr2.2:51108874-51108893 MS.gene041355:intron 35.0%
GATCCTGATTTCTACAAGAT+AGG - chr2.2:51109455-51109474 MS.gene041355:intron 35.0%
GCATATACACCAAAACCATT+TGG + chr2.2:51109527-51109546 None:intergenic 35.0%
GCATTTATTTGGTCAGATGT+GGG + chr2.2:51111392-51111411 None:intergenic 35.0%
GTAGCGAGACTTTAAATTGA+AGG + chr2.2:51109141-51109160 None:intergenic 35.0%
GTATATTTGTGTGCAGATGT+GGG + chr2.2:51111348-51111367 None:intergenic 35.0%
GTTAATCTTGTTCAGCATAG+TGG - chr2.2:51110419-51110438 MS.gene041355:intron 35.0%
TAAAAACTCAGTGGACCAAA+TGG + chr2.2:51112631-51112650 None:intergenic 35.0%
TACGATAATACTCTTCAGGA+AGG + chr2.2:51112767-51112786 None:intergenic 35.0%
TAGCATTGCCCTTACTTTAT+TGG - chr2.2:51113389-51113408 MS.gene041355:intron 35.0%
TAGGCTAGTATAAAGGAACT+AGG - chr2.2:51111040-51111059 MS.gene041355:intron 35.0%
TATATTTGTGTGCAGATGTG+GGG + chr2.2:51111347-51111366 None:intergenic 35.0%
TATCAACTCAACAAATCCAG+AGG - chr2.2:51109782-51109801 MS.gene041355:intron 35.0%
TCAAATATTGGATGACCAAG+GGG + chr2.2:51109759-51109778 None:intergenic 35.0%
TCTAGTCCACCAATAAAGTA+AGG + chr2.2:51113401-51113420 None:intergenic 35.0%
TCTCATTGTAGAAGCAAGAT+CGG + chr2.2:51110279-51110298 None:intergenic 35.0%
TGCATTTATTTGGTCAGATG+TGG + chr2.2:51111393-51111412 None:intergenic 35.0%
TGGTCATTAAACGAAAGCTA+AGG + chr2.2:51113556-51113575 None:intergenic 35.0%
TGTGCATATGTGACATGATA+CGG - chr2.2:51109019-51109038 MS.gene041355:intron 35.0%
TTCAACGTAGGCTAGTATAA+AGG - chr2.2:51111033-51111052 MS.gene041355:intron 35.0%
TTGTAGAAATCAGGATCTAC+AGG + chr2.2:51109452-51109471 None:intergenic 35.0%
TTGTCAGTCTTCAACATATC+TGG - chr2.2:51112741-51112760 MS.gene041355:CDS 35.0%
TTGTTGCCTAAATCCAACAT+GGG - chr2.2:51111752-51111771 MS.gene041355:CDS 35.0%
! AACAATTTGGCTCAAACGAA+TGG + chr2.2:51110764-51110783 None:intergenic 35.0%
! ACTAGATAGACTTTTTGTGC+AGG - chr2.2:51110969-51110988 MS.gene041355:intron 35.0%
! ACTGGAGATACTTTTGTTGA+TGG - chr2.2:51112903-51112922 MS.gene041355:intron 35.0%
! ACTTTATGGGTTATGCTAAC+CGG - chr2.2:51113217-51113236 MS.gene041355:intron 35.0%
! AGAGTATTATCGTAACGGTA+TGG - chr2.2:51112773-51112792 MS.gene041355:CDS 35.0%
! ATATGAGACCTTTTTGTTGG+TGG - chr2.2:51108947-51108966 MS.gene041355:intron 35.0%
! ATTCCTATAAGGCCAGTTTT+TGG - chr2.2:51109313-51109332 MS.gene041355:CDS 35.0%
! GAAGCTGTTTCATCATCTTT+AGG + chr2.2:51108785-51108804 None:intergenic 35.0%
! GACAACTTTTGGCAGTATTA+CGG - chr2.2:51110042-51110061 MS.gene041355:CDS 35.0%
! GTATATCTAGGAGGAACTTT+TGG - chr2.2:51110241-51110260 MS.gene041355:intron 35.0%
! GTTTCAACAGAAGCTTTAAC+AGG + chr2.2:51108737-51108756 None:intergenic 35.0%
! GTTTTCCCTAATGATGAACT+TGG - chr2.2:51109651-51109670 MS.gene041355:intron 35.0%
! TATGAGACCTTTTTGTTGGT+GGG - chr2.2:51108948-51108967 MS.gene041355:intron 35.0%
! TGCATATGAGACCTTTTTGT+TGG - chr2.2:51108944-51108963 MS.gene041355:intron 35.0%
! TTGACTGCAAAGACAACTTT+TGG - chr2.2:51110031-51110050 MS.gene041355:CDS 35.0%
!! AATATGCTGATTCCTTATGC+TGG - chr2.2:51110563-51110582 MS.gene041355:intron 35.0%
!! CAAAAGTGCCTGCATTTATT+TGG + chr2.2:51111403-51111422 None:intergenic 35.0%
!! CAGTCATTTTGCGAAAAACA+AGG + chr2.2:51113451-51113470 None:intergenic 35.0%
!! CCTGAAGAGTATTATCGTAA+CGG - chr2.2:51112768-51112787 MS.gene041355:CDS 35.0%
!! TAAGCTTTGTTCACCTCAAA+TGG - chr2.2:51110586-51110605 MS.gene041355:intron 35.0%
AACAACGAGCGTTAGAATTC+TGG - chr2.2:51110306-51110325 MS.gene041355:intron 40.0%
AAGCAAGACCAGAAACTGTT+AGG - chr2.2:51113065-51113084 MS.gene041355:intron 40.0%
AATCCCAAGTGAAGAAAGGA+AGG - chr2.2:51112983-51113002 MS.gene041355:intron 40.0%
AATCTTTGTGGCAGACAGAT+TGG - chr2.2:51109974-51109993 MS.gene041355:intron 40.0%
ACAACGAGCGTTAGAATTCT+GGG - chr2.2:51110307-51110326 MS.gene041355:intron 40.0%
ACAGGACACAATATCCAACT+GGG - chr2.2:51112354-51112373 MS.gene041355:intron 40.0%
AGATGATGAAACAGCTTCTG+AGG - chr2.2:51108787-51108806 MS.gene041355:intron 40.0%
AGGATGATTGCAATTACCTC+TGG + chr2.2:51109801-51109820 None:intergenic 40.0%
ATAGCCATAGTGAATACGAG+AGG + chr2.2:51111068-51111087 None:intergenic 40.0%
ATATTTCAGACATCCCCAGT+TGG + chr2.2:51112371-51112390 None:intergenic 40.0%
ATCTTTGTGGCAGACAGATT+GGG - chr2.2:51109975-51109994 MS.gene041355:intron 40.0%
ATGAATCGCCTGAAGTAAAC+GGG - chr2.2:51113424-51113443 MS.gene041355:intron 40.0%
CAACATGAGATGTCGTAAAG+TGG + chr2.2:51110217-51110236 None:intergenic 40.0%
CATGAATCGCCTGAAGTAAA+CGG - chr2.2:51113423-51113442 MS.gene041355:intron 40.0%
CATTAGGGAAAACAGCCATA+TGG + chr2.2:51109644-51109663 None:intergenic 40.0%
CATTGCCCTTACTTTATTGG+TGG - chr2.2:51113392-51113411 MS.gene041355:intron 40.0%
CCGTTACGATAATACTCTTC+AGG + chr2.2:51112771-51112790 None:intergenic 40.0%
CTAGTACTTTCATCTGCACT+GGG + chr2.2:51110078-51110097 None:intergenic 40.0%
CTCATTGTAGAAGCAAGATC+GGG + chr2.2:51110278-51110297 None:intergenic 40.0%
CTTTATGCCCACCAACAAAA+AGG + chr2.2:51108958-51108977 None:intergenic 40.0%
GAACAAAGCTTACCAGCATA+AGG + chr2.2:51110578-51110597 None:intergenic 40.0%
GACCAAGGGGAATTATATCA+GGG + chr2.2:51109746-51109765 None:intergenic 40.0%
GAGAATTTGATCACATCCCA+AGG + chr2.2:51112690-51112709 None:intergenic 40.0%
GCAACACACAAGAAACAGAA+GGG - chr2.2:51111715-51111734 MS.gene041355:CDS 40.0%
GTCGATGAGGACCTATATTT+AGG + chr2.2:51112438-51112457 None:intergenic 40.0%
GTCTCATATGCACCCAAAAA+AGG + chr2.2:51108936-51108955 None:intergenic 40.0%
GTTGTTGCCTAAATCCAACA+TGG - chr2.2:51111751-51111770 MS.gene041355:CDS 40.0%
TACAGGACACAATATCCAAC+TGG - chr2.2:51112353-51112372 MS.gene041355:intron 40.0%
TGAACTTGGGCAGGTTATAA+TGG - chr2.2:51109665-51109684 MS.gene041355:intron 40.0%
TGACCAAGGGGAATTATATC+AGG + chr2.2:51109747-51109766 None:intergenic 40.0%
TGATCCTCAAAGGTTCATGT+GGG - chr2.2:51110472-51110491 MS.gene041355:intron 40.0%
TGCAACACACAAGAAACAGA+AGG - chr2.2:51111714-51111733 MS.gene041355:CDS 40.0%
TGCTCATAGTTTAGTCGATG+AGG + chr2.2:51112451-51112470 None:intergenic 40.0%
TGGGATGTGATCAAATTCTC+AGG - chr2.2:51112690-51112709 MS.gene041355:intron 40.0%
TGTTGGATTTAGGCAACAAC+AGG + chr2.2:51111751-51111770 None:intergenic 40.0%
TTCAAGAGTTCTCGTAGCTT+CGG + chr2.2:51113591-51113610 None:intergenic 40.0%
TTCCCTGATATAATTCCCCT+TGG - chr2.2:51109741-51109760 MS.gene041355:intron 40.0%
TTCCTTAACGATTGCCCTAA+GGG + chr2.2:51113245-51113264 None:intergenic 40.0%
TTCCTTTCTTCACTTGGGAT+TGG + chr2.2:51112984-51113003 None:intergenic 40.0%
TTCGTACTCATGCATAGTAG+CGG - chr2.2:51110631-51110650 MS.gene041355:intron 40.0%
TTTCCTTAACGATTGCCCTA+AGG + chr2.2:51113246-51113265 None:intergenic 40.0%
! AGAATTCTGGGAGAAGAACT+GGG - chr2.2:51110319-51110338 MS.gene041355:intron 40.0%
! ATCTTTAGGAGGCTGAAACA+AGG + chr2.2:51108771-51108790 None:intergenic 40.0%
! CTTTAGGAAGATTGCATGCT+TGG + chr2.2:51111288-51111307 None:intergenic 40.0%
! GATAGACTTTTTGTGCAGGA+AGG - chr2.2:51110973-51110992 MS.gene041355:intron 40.0%
! GCAAGACGTTTTACTTTGAG+CGG + chr2.2:51110449-51110468 None:intergenic 40.0%
! GCATGTCAGATTTTCAACGT+AGG - chr2.2:51111021-51111040 MS.gene041355:intron 40.0%
! GCTGTTTCATCATCTTTAGG+AGG + chr2.2:51108782-51108801 None:intergenic 40.0%
! TAGAATTCTGGGAGAAGAAC+TGG - chr2.2:51110318-51110337 MS.gene041355:intron 40.0%
! TAGCTTACTTCTAGCTACAG+AGG - chr2.2:51110095-51110114 MS.gene041355:intron 40.0%
! TAGTGGTCTTACTCTTAAGC+CGG - chr2.2:51108987-51109006 MS.gene041355:intron 40.0%
! TCTTTAGGAGGCTGAAACAA+GGG + chr2.2:51108770-51108789 None:intergenic 40.0%
!! CAAGTTTTGTGAGAAGAAGG+TGG - chr2.2:51111910-51111929 MS.gene041355:intron 40.0%
!! CATCCAAAAACTGGCCTTAT+AGG + chr2.2:51109319-51109338 None:intergenic 40.0%
!! GATTTTAAGGAAGGGCCAAA+TGG - chr2.2:51109509-51109528 MS.gene041355:CDS 40.0%
!! GCATAAAGCGAGTGTTTTAG+TGG - chr2.2:51108970-51108989 MS.gene041355:intron 40.0%
!! TTTTAAGGACAGGATGCTTG+AGG - chr2.2:51110797-51110816 MS.gene041355:intron 40.0%
!!! GCTCGGTGTTTCTTTTCTTT+AGG + chr2.2:51111304-51111323 None:intergenic 40.0%
AATGCTAACCAATGCCCTCA+GGG + chr2.2:51113376-51113395 None:intergenic 45.0%
ACATCTCCATCTGACCATGT+TGG + chr2.2:51112957-51112976 None:intergenic 45.0%
ACATTGAAGCTAATCGTCGC+TGG - chr2.2:51111529-51111548 MS.gene041355:intron 45.0%
ACATTGCCAACATGGTCAGA+TGG - chr2.2:51112948-51112967 MS.gene041355:intron 45.0%
ACCTGCCCAAGTTCATCATT+AGG + chr2.2:51109660-51109679 None:intergenic 45.0%
ACGGATAAGAAAGGGAGATG+AGG - chr2.2:51110839-51110858 MS.gene041355:intron 45.0%
ACTGTTACACTAGCCCATGT+TGG + chr2.2:51111768-51111787 None:intergenic 45.0%
AGATGTGGGGTTAAAGTGGT+AGG + chr2.2:51111334-51111353 None:intergenic 45.0%
AGGCAATGCACGAATCCATT+TGG - chr2.2:51112710-51112729 MS.gene041355:CDS 45.0%
AGGCTGAAACAAGGGAAATG+GGG + chr2.2:51108762-51108781 None:intergenic 45.0%
AGTATGAGAACAGGAAGGTG+TGG - chr2.2:51111684-51111703 MS.gene041355:intron 45.0%
CACTAGCCCATGTTGGATTT+AGG + chr2.2:51111761-51111780 None:intergenic 45.0%
CAGCCTTCCTTTCTTCACTT+GGG + chr2.2:51112989-51113008 None:intergenic 45.0%
CAGGACACAATATCCAACTG+GGG - chr2.2:51112355-51112374 MS.gene041355:intron 45.0%
CCTGCCCAAGTTCATCATTA+GGG + chr2.2:51109659-51109678 None:intergenic 45.0%
CTCCAATCCCAAGTGAAGAA+AGG - chr2.2:51112979-51112998 MS.gene041355:intron 45.0%
CTCCATAAGCTCGCATACTT+CGG + chr2.2:51109487-51109506 None:intergenic 45.0%
CTTTCTTCACTTGGGATTGG+AGG + chr2.2:51112981-51113000 None:intergenic 45.0%
GAGGCTGAAACAAGGGAAAT+GGG + chr2.2:51108763-51108782 None:intergenic 45.0%
GCTAGTACTTTCATCTGCAC+TGG + chr2.2:51110079-51110098 None:intergenic 45.0%
GCTGGACAACGGATAAGAAA+GGG - chr2.2:51110831-51110850 MS.gene041355:intron 45.0%
GTCACATATGCACACCAACA+AGG + chr2.2:51109013-51109032 None:intergenic 45.0%
GTGATCCTCAAAGGTTCATG+TGG - chr2.2:51110471-51110490 MS.gene041355:intron 45.0%
GTTTGCGCCATGGTTATTTG+TGG - chr2.2:51108666-51108685 MS.gene041355:CDS 45.0%
TAGGAAGATTGCATGCTTGG+TGG + chr2.2:51111285-51111304 None:intergenic 45.0%
TCAAGAGTTCTCGTAGCTTC+GGG + chr2.2:51113590-51113609 None:intergenic 45.0%
TCAGTTATTACACGGGTCCA+TGG + chr2.2:51111841-51111860 None:intergenic 45.0%
TCCTGTCCTTAAAACGCCAA+TGG + chr2.2:51110791-51110810 None:intergenic 45.0%
TCCTTAACCATTTGCCCTGA+GGG - chr2.2:51113359-51113378 MS.gene041355:intron 45.0%
TGCTGGACAACGGATAAGAA+AGG - chr2.2:51110830-51110849 MS.gene041355:intron 45.0%
TTAATGAGGCTACTCACCCT+TGG + chr2.2:51109578-51109597 None:intergenic 45.0%
TTCCTTAACCATTTGCCCTG+AGG - chr2.2:51113358-51113377 MS.gene041355:intron 45.0%
TTGTGAGAAGAAGGTGGAAC+CGG - chr2.2:51111916-51111935 MS.gene041355:intron 45.0%
! AAGGAAGGGCCAAATGGTTT+TGG - chr2.2:51109515-51109534 MS.gene041355:CDS 45.0%
! ATACGGATTTTCATCGCCAG+TGG - chr2.2:51112248-51112267 MS.gene041355:CDS 45.0%
! ATTGTGGGCTGATAGGATAC+AGG - chr2.2:51112336-51112355 MS.gene041355:intron 45.0%
! GGAGAAGTATGAGAACAGGA+AGG - chr2.2:51111679-51111698 MS.gene041355:intron 45.0%
!! CAGTTTCTGGTCTTGCTTAG+AGG + chr2.2:51113063-51113082 None:intergenic 45.0%
!! TTTCTGGTCTTGCTTAGAGG+TGG + chr2.2:51113060-51113079 None:intergenic 45.0%
!!! AGTTTTAGAGGATGTGCTGC+TGG - chr2.2:51111443-51111462 MS.gene041355:CDS 45.0%
!!! TCCATTGGCGTTTTAAGGAC+AGG - chr2.2:51110787-51110806 MS.gene041355:intron 45.0%
!! ATAAACAAAATAATAAATAT+AGG - chr2.2:51111245-51111264 MS.gene041355:intron 5.0%
!! TAAACAAAATAATAAATATA+GGG - chr2.2:51111246-51111265 MS.gene041355:intron 5.0%
AACAAGGGCCCGTTTACTTC+AGG + chr2.2:51113435-51113454 None:intergenic 50.0%
AACTGGACCTGAGACCTAAC+CGG - chr2.2:51111158-51111177 MS.gene041355:intron 50.0%
ACTGCCCACATGAACCTTTG+AGG + chr2.2:51110479-51110498 None:intergenic 50.0%
AGCTTCGGGTGATGAATCTG+TGG + chr2.2:51113576-51113595 None:intergenic 50.0%
CAAAGGTTCATGTGGGCAGT+AGG - chr2.2:51110479-51110498 MS.gene041355:intron 50.0%
CAATGCTAACCAATGCCCTC+AGG + chr2.2:51113377-51113396 None:intergenic 50.0%
CACCAGATGAACTGCAGAAC+CGG + chr2.2:51111938-51111957 None:intergenic 50.0%
CAGATGTGGGGTACATATGC+TGG + chr2.2:51111379-51111398 None:intergenic 50.0%
CAGCACGAACATTGCCAACA+TGG - chr2.2:51112940-51112959 MS.gene041355:intron 50.0%
CATATGCACACCAACAAGGC+CGG + chr2.2:51109009-51109028 None:intergenic 50.0%
CCAATGAAACCATGACCCGA+AGG + chr2.2:51111189-51111208 None:intergenic 50.0%
CCCTAATGATGAACTTGGGC+AGG - chr2.2:51109656-51109675 MS.gene041355:intron 50.0%
CCTTCGGGTCATGGTTTCAT+TGG - chr2.2:51111186-51111205 MS.gene041355:intron 50.0%
GATCTACAGGCTCCAACTAG+AGG + chr2.2:51109439-51109458 None:intergenic 50.0%
GCAGAAGTTCTATCGAGCAC+TGG - chr2.2:51112885-51112904 MS.gene041355:intron 50.0%
GCAGCCTTCCTTTCTTCACT+TGG + chr2.2:51112990-51113009 None:intergenic 50.0%
GGAGCCTCTCGTATTCACTA+TGG - chr2.2:51111061-51111080 MS.gene041355:intron 50.0%
GGAGGCTGAAACAAGGGAAA+TGG + chr2.2:51108764-51108783 None:intergenic 50.0%
GTCCGAAGTATGCGAGCTTA+TGG - chr2.2:51109482-51109501 MS.gene041355:intron 50.0%
GTCTTGCTCGTGATCCTCAA+AGG - chr2.2:51110462-51110481 MS.gene041355:intron 50.0%
GTGCAGATGTGGGGTTAAAG+TGG + chr2.2:51111338-51111357 None:intergenic 50.0%
TATGCTAACCGGTGCCCTTA+GGG - chr2.2:51113228-51113247 MS.gene041355:intron 50.0%
TGCCCTTAGGGCAATCGTTA+AGG - chr2.2:51113240-51113259 MS.gene041355:intron 50.0%
TGGGTCGCCACAAATAACCA+TGG + chr2.2:51108676-51108695 None:intergenic 50.0%
TGGTTCAACCAGTGCGATCA+CGG - chr2.2:51111206-51111225 MS.gene041355:intron 50.0%
TGTGGGGTACATATGCTGGA+AGG + chr2.2:51111375-51111394 None:intergenic 50.0%
TTATGCTAACCGGTGCCCTT+AGG - chr2.2:51113227-51113246 MS.gene041355:intron 50.0%
! AACCGGTTCTGCAGTTCATC+TGG - chr2.2:51111933-51111952 MS.gene041355:intron 50.0%
! ATGAGAACAGGAAGGTGTGG+AGG - chr2.2:51111687-51111706 MS.gene041355:intron 50.0%
! GACGGGAGAAGTATGAGAAC+AGG - chr2.2:51111675-51111694 MS.gene041355:intron 50.0%
! TACTCTTAAGCCGGCCTTGT+TGG - chr2.2:51108996-51109015 MS.gene041355:intron 50.0%
AAGTGGTAGGCTTGTGCGCT+CGG + chr2.2:51111321-51111340 None:intergenic 55.0%
ACCAATGCCCTCAGGGCAAA+TGG + chr2.2:51113369-51113388 None:intergenic 55.0%
GCCCTCAGGGCAAATGGTTA+AGG + chr2.2:51113363-51113382 None:intergenic 55.0%
TGAGGCTACTCACCCTTGGT+CGG + chr2.2:51109574-51109593 None:intergenic 55.0%
TGGCGACCCACTTACTCGTT+TGG - chr2.2:51108686-51108705 MS.gene041355:intron 55.0%
! AACGATTGCCCTAAGGGCAC+CGG + chr2.2:51113239-51113258 None:intergenic 55.0%
! ACCATTTGCCCTGAGGGCAT+TGG - chr2.2:51113365-51113384 MS.gene041355:intron 55.0%
! TGCATGCTTGGTGGCAACTC+TGG + chr2.2:51111276-51111295 None:intergenic 55.0%
!!! GGAGGAACTTTTGGAGCTGC+AGG - chr2.2:51110250-51110269 MS.gene041355:intron 55.0%
ACCTAACCGGCGAGACCTTC+GGG - chr2.2:51111171-51111190 MS.gene041355:intron 60.0%
CAGCTCAACCGTGATCGCAC+TGG + chr2.2:51111217-51111236 None:intergenic 60.0%
CAGTGCGATCACGGTTGAGC+TGG - chr2.2:51111215-51111234 MS.gene041355:intron 60.0%
CGAACCTCTTCGCCGACCAA+GGG - chr2.2:51109559-51109578 MS.gene041355:CDS 60.0%
GACCTAACCGGCGAGACCTT+CGG - chr2.2:51111170-51111189 MS.gene041355:intron 60.0%
TCGAACCTCTTCGCCGACCA+AGG - chr2.2:51109558-51109577 MS.gene041355:CDS 60.0%
CCATGACCCGAAGGTCTCGC+CGG + chr2.2:51111180-51111199 None:intergenic 65.0%
CTCACCCTTGGTCGGCGAAG+AGG + chr2.2:51109566-51109585 None:intergenic 65.0%
! ACCCGAAGGTCTCGCCGGTT+AGG + chr2.2:51111175-51111194 None:intergenic 65.0%
! GGTCTCGCCGGTTAGGTCTC+AGG + chr2.2:51111168-51111187 None:intergenic 65.0%
CCGGCGAGACCTTCGGGTCA+TGG - chr2.2:51111177-51111196 MS.gene041355:intron 70.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 51108659 51113621 51108659 ID=MS.gene041355
chr2.2 mRNA 51108659 51113621 51108659 ID=MS.gene041355.t1;Parent=MS.gene041355
chr2.2 exon 51113472 51113621 51113472 ID=MS.gene041355.t1.exon1;Parent=MS.gene041355.t1
chr2.2 CDS 51113472 51113621 51113472 ID=cds.MS.gene041355.t1;Parent=MS.gene041355.t1
chr2.2 exon 51112700 51112837 51112700 ID=MS.gene041355.t1.exon2;Parent=MS.gene041355.t1
chr2.2 CDS 51112700 51112837 51112700 ID=cds.MS.gene041355.t1;Parent=MS.gene041355.t1
chr2.2 exon 51112477 51112602 51112477 ID=MS.gene041355.t1.exon3;Parent=MS.gene041355.t1
chr2.2 CDS 51112477 51112602 51112477 ID=cds.MS.gene041355.t1;Parent=MS.gene041355.t1
chr2.2 exon 51112164 51112292 51112164 ID=MS.gene041355.t1.exon4;Parent=MS.gene041355.t1
chr2.2 CDS 51112164 51112292 51112164 ID=cds.MS.gene041355.t1;Parent=MS.gene041355.t1
chr2.2 exon 51111940 51112029 51111940 ID=MS.gene041355.t1.exon5;Parent=MS.gene041355.t1
chr2.2 CDS 51111940 51112029 51111940 ID=cds.MS.gene041355.t1;Parent=MS.gene041355.t1
chr2.2 exon 51111696 51111846 51111696 ID=MS.gene041355.t1.exon6;Parent=MS.gene041355.t1
chr2.2 CDS 51111696 51111846 51111696 ID=cds.MS.gene041355.t1;Parent=MS.gene041355.t1
chr2.2 exon 51111420 51111529 51111420 ID=MS.gene041355.t1.exon7;Parent=MS.gene041355.t1
chr2.2 CDS 51111420 51111529 51111420 ID=cds.MS.gene041355.t1;Parent=MS.gene041355.t1
chr2.2 exon 51110011 51110082 51110011 ID=MS.gene041355.t1.exon8;Parent=MS.gene041355.t1
chr2.2 CDS 51110011 51110082 51110011 ID=cds.MS.gene041355.t1;Parent=MS.gene041355.t1
chr2.2 exon 51109491 51109596 51109491 ID=MS.gene041355.t1.exon9;Parent=MS.gene041355.t1
chr2.2 CDS 51109491 51109596 51109491 ID=cds.MS.gene041355.t1;Parent=MS.gene041355.t1
chr2.2 exon 51109194 51109391 51109194 ID=MS.gene041355.t1.exon10;Parent=MS.gene041355.t1
chr2.2 CDS 51109194 51109391 51109194 ID=cds.MS.gene041355.t1;Parent=MS.gene041355.t1
chr2.2 exon 51108659 51108701 51108659 ID=MS.gene041355.t1.exon11;Parent=MS.gene041355.t1
chr2.2 CDS 51108659 51108701 51108659 ID=cds.MS.gene041355.t1;Parent=MS.gene041355.t1
Gene Sequence

>MS.gene041355

TTCAAAGGTTTGCGCCATGGTTATTTGTGGCGACCCACTTACTCGTTTGGTTTTTGTGCTGAAAACAAAGTACAACCTGTTAAAGCTTCTGTTGAAACTGCCCCATTTCCCTTGTTTCAGCCTCCTAAAGATGATGAAACAGCTTCTGAGGTAAAACCCATTTTGCACCTTGTTTGTTTATACTACTGTTTTTGGTTGTTGTTTATTTATTGGTTGAAAGTAACAACTAGGACTAAGGATTGTTAAATTAGCTTATATATGCAAAAGAATGTTACCTTTTTTGGGTGCATATGAGACCTTTTTGTTGGTGGGCATAAAGCGAGTGTTTTAGTGGTCTTACTCTTAAGCCGGCCTTGTTGGTGTGCATATGTGACATGATACGGATATTGACATGTAGACACCTATAATTTTATAAGATGAAATTGATTGTATATAAACACACATGTCAATGTCGTGTCAATGTCAGACACTCGAACATGCCTTCAATTTAAAGTCTCGCTACTACATAATTGTTCAGAGTTTTCTACAATTTCAAAGATTGCAACAAAACATTGACTGTGATTATAATTTAAAATGTTGGATGTTTCAATAATGAGATGTGCTTTTGTGTGTGTAATAGATAGAGTAAAGTTAATTTTGAGATGCAATATCTTCATTCCTATAAGGCCAGTTTTTGGATGAATTCTTTAAAGGGTCTTCTGTTTTTATGAGATTGAGATATTTAGTTGTGATATGGATTCTGTTTTCTCTTTGTTTCTTCGTGTTAATTTATTTGTTCCTCTAGTTGGAGCCTGTAGATCCTGATTTCTACAAGATAGGATTCGTCCGAAGTATGCGAGCTTATGGAGTTGATTTTAAGGAAGGGCCAAATGGTTTTGGTGTATATGCTTCTAAAGATGTCGAACCTCTTCGCCGACCAAGGGTGAGTAGCCTCATTAATTATTTGTATAATGCTCTTTATGATTATATTCTGAGTAGTTGTCCATATGGCTGTTTTCCCTAATGATGAACTTGGGCAGGTTATAATGGAAATTCCTCTTGAATTGATGCTAACCATAAGCAAGAAATTACCATGGATGTTTTTCCCTGATATAATTCCCCTTGGTCATCCAATATTTGATATTATCAACTCAACAAATCCAGAGGTAATTGCAATCATCCTCTAAAGTCATTAGTTCAAAATATGATATAATCGATTTCTTGATTGTTTTCATGATAAAATAATATGTTGATACTCAAAAAAGTAACTGTTGTATATACTTAAAAAAGTAAAAAACGTTGGTTTTTCTAGTTATCTGCTTAATGTAATTGTGTAAATCTTTGTGGCAGACAGATTGGGATTTACGATTAGCATGCCTTCTCTTGTTTTCATTTGACTGCAAAGACAACTTTTGGCAGTATTACGGCGATTTCTTACCCAGTGCAGATGAAAGTACTAGCTTACTTCTAGCTACAGAGGTGCGTAAAAAATAGATTTTTTTATCATTAAACCATTGATTGATATTTAGCTAACATCAGATGTAGCTACATTTGGAACATACCACAGTTTTAGAATCCACTTTACGACATCTCATGTTGATTTGTATATCTAGGAGGAACTTTTGGAGCTGCAGGATCCCGATCTTGCTTCTACAATGAGAGTTCAGCAACAACGAGCGTTAGAATTCTGGGAGAAGAACTGGGTAGAGAGAAAACTGTCCTTGTTGAAATTTTTGTCTTCTATGATGCATATCACTTAGTTTTTGTTCTCAACAAATGGTGTTAATCTTGTTCAGCATAGTGGTGCACCGCTCAAAGTAAAACGTCTTGCTCGTGATCCTCAAAGGTTCATGTGGGCAGTAGGAATTGCACAGTCACGATGTATCAACATGCAAATGAGAATGTGTGCACTAACTCAACAAGCGAATATGCTGATTCCTTATGCTGGTAAGCTTTGTTCACCTCAAATGGTCTAACCAACTATTCTATCATTTTCGTACTCATGCATAGTAGCGGTTCTTGTTTTTTTTTTTTACATTTGATGTAAAGTTTTTCTTTCCTTTTTGATAAAATAACAACAGAGGTAACTGATTAACTTAGTCTTGCTTTTCAGATATGCTGAACCATTCGTTTGAGCCAAATTGTTTTTTCCATTGGCGTTTTAAGGACAGGATGCTTGAGGTTCTTATAAATGCTGGACAACGGATAAGAAAGGGAGATGAGGTAAATCACTTTATACTTTTGTGAAGTATGCTTTTCGTGATTCCTTCCTTATATTAGACGTTACTTGTGCAGATTTTGTTTTTCTTCTTATAATATTGATTGTCCCAAACTAGATAGACTTTTTGTGCAGGAAGGTAGTAAAAATATAGACGGATAGAGTGCATGTCAGATTTTCAACGTAGGCTAGTATAAAGGAACTAGGAGCCTCTCGTATTCACTATGGCTATACATAGAATGTTTTCTCTTATTGTATGAATTTCACATCCGTGTATATGTGGTAATGATCAATGTTTTAAAAACTGGACCTGAGACCTAACCGGCGAGACCTTCGGGTCATGGTTTCATTGGTTCAACCAGTGCGATCACGGTTGAGCTGGATAATTAATAAACAAAATAATAAATATAGGGCTCACCAGAGTTGCCACCAAGCATGCAATCTTCCTAAAGAAAAGAAACACCGAGCGCACAAGCCTACCACTTTAACCCCACATCTGCACACAAATATACTAAGCCTTCCAGCATATGTACCCCACATCTGACCAAATAAATGCAGGCACTTTTGTTGCAGAAATTATGAGATATAGTTTTAGAGGATGTGCTGCTGGTTATGACACTTGATGTACTGAATAAAGGAGTAGAAATTACTATCAACTGCACTTCGTTACACAACATTGAAGCTAATCGTCGCTGGTTTCAAAGTGCTGTATTCCTCCGTTAAATCTATCATAATTTTTTTTCTTTCTACTTTGAATAGTGAAATCTAAAATGACTTGAAACATGTGAAAACAAGAAAGAAATATTAAGCATATTTGTGGACGGGAGAAGTATGAGAACAGGAAGGTGTGGAGGCACATGCAACACACAAGAAACAGAAGGGTTACTGTGAGCCTGTTGTTGCCTAAATCCAACATGGGCTAGTGTAACAGTGTAATAAAGCTGTTAACGTTATAAAAGGAAATGACTTCTCTGATATCTAACCATGGACCCGTGTAATAACTGATTAAGAAATGCACGAGAGTGAGAATAATTATGGAGTTTTCCTTAAAAATCAAGTTTTGTGAGAAGAAGGTGGAACCGGTTCTGCAGTTCATCTGGTGTTTCTACCAGTTTTTTTTTCTACCTAACAGTTTTTAATGATCTAGTCATAATCTAAGTGACATAGGAGTGTTATTGTTTAGAAGCTTGAAAACTAATTGGATAGTTTTTCAATGCTTTTAGAGCATACATGCTTTTAAGTTAGTGAAACTAATTTTTTTCCTAGCATGTTTAAATTACCATTTGTATTATTTCATTGTGTGACATGGATATCCTAATTATATTGTCCAAAATTCTAACAGATGACAGTTGATTACATGAGCGCACAGAAGAACGACATGTTAATGCAAAGATACGGATTTTCATCGCCAGTGGTAACTTTCTTTTTATACTAAATCTTTTTGAAAGGAAAGTTCTGTTTATGCTCTTTGTATTAAAAAATTGTGGGCTGATAGGATACAGGACACAATATCCAACTGGGGATGTCTGAAATATTTAAAAGTTATAAGACATGGCACAACTATAATACCACATTCTTACCTAAATATAGGTCCTCATCGACTAAACTATGAGCATTAAGGAAGTCTGTATTGGTTTAAAATTTGTTAACATGTATTATTTTTGTATGCTCATTGTCACCATATATGTGCAGTTGCTTCTTTGAAGTATTTTCATTATACTGTTCTTTCATTATTCTTTGATGAATAATTCATTTAAACTTATACATGTTTGCCATTTGGTCCACTGAGTTTTTAAAATTTAGTTCTCAAACTCACTTAAATATGCAGAATCCTTGGGATGTGATCAAATTCTCAGGCAATGCACGAATCCATTTGGATTCTTTCTTGTCAGTCTTCAACATATCTGGCCTTCCTGAAGAGTATTATCGTAACGGTATGGTCAATATTATTTTAAATTCTAGAATCTACTTTCTTGCACATTTCTCTTTTCAAATCGGAATTATTTAGGATATCAGTATGAAATTCTTAGCAGAAGTTCTATCGAGCACTGGAGATACTTTTGTTGATGGAGCTGTCATAGCTGCAGCACGAACATTGCCAACATGGTCAGATGGAGATGTACCTCCAATCCCAAGTGAAGAAAGGAAGGCTGCGAAAGCATTACAACAAGAGTGCAAACAAATGCTTGCAGAATTCGCTACCACCTCTAAGCAAGACCAGAAACTGTTAGGTAATTCAGTGTTCTTATCTTGATACTAGAAAGAAAGTAGAAACATGACACTGATTGTCATTGAATTTCCATGACAATTAGTGTCATGTTTCTCCTTTTAAAATTCTTTCAAAATGTCGTTCTAATATTTACTTTATGGGTTATGCTAACCGGTGCCCTTAGGGCAATCGTTAAGGAAACCCAAAAAAGAAAGTTTTAAGTTGAAAATACCACTTTTTAAACTTTTGAGAAGTTGAATGCACAAGTTCCAATGCGAGATTACTATATTTGCTTCCTTAACCATTTGCCCTGAGGGCATTGGTTAGCATTGCCCTTACTTTATTGGTGGACTAGAAACATGAATCGCCTGAAGTAAACGGGCCCTTGTTTTTCGCAAAATGACTGTTGTGCAGTTGATTACTAGACTTTGCTTTTATGATAAGTATTTTTTTTATGATCCTTATACGATAAAAAAAGCTAAACTAATCCTTAGCTTTCGTTTAATGACCACAGATTCATCACCCGAAGCTACGAGAACTCTTGAAGCTGCAATAAA
Protein sequence

>MS.gene041355.t1

FKGLRHGYLWRPTYSFGFCAENKVQPVKASVETAPFPLFQPPKDDETASELEPVDPDFYKIGFVRSMRAYGVDFKEGPNGFGVYASKDVEPLRRPRVIMEIPLELMLTISKKLPWMFFPDIIPLGHPIFDIINSTNPETDWDLRLACLLLFSFDCKDNFWQYYGDFLPSADESTSLLLATEEELLELQDPDLASTMRVQQQRALEFWEKNWHSGAPLKVKRLARDPQRFMWAVGIAQSRCINMQMRMCALTQQANMLIPYADMLNHSFEPNCFFHWRFKDRMLEVLINAGQRIRKGDEMTVDYMSAQKNDMLMQRYGFSSPVNPWDVIKFSGNARIHLDSFLSVFNISGLPEEYYRNEVLSSTGDTFVDGAVIAAARTLPTWSDGDVPPIPSEERKAAKALQQECKQMLAEFATTSKQDQKLLDSSPEATRTLEAAI