Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041387.t1 | XP_003609491.2 | 87.9 | 240 | 23 | 2 | 1 | 238 | 1 | 236 | 2.30E-118 | 435.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041387.t1 | A0A396IEQ3 | 87.9 | 240 | 23 | 2 | 1 | 238 | 1 | 236 | 1.6e-118 | 435.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene041387.t1 | TF | PLATZ |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041387.t1 | MTR_4g116300 | 87.815 | 238 | 23 | 2 | 3 | 238 | 1 | 234 | 6.25e-145 | 407 |
| MS.gene041387.t1 | MTR_4g094680 | 59.732 | 149 | 54 | 1 | 5 | 147 | 19 | 167 | 1.66e-59 | 190 |
| MS.gene041387.t1 | MTR_2g055210 | 43.868 | 212 | 107 | 5 | 5 | 210 | 99 | 304 | 2.97e-52 | 174 |
| MS.gene041387.t1 | MTR_2g036170 | 49.714 | 175 | 76 | 3 | 7 | 181 | 36 | 198 | 1.22e-48 | 162 |
| MS.gene041387.t1 | MTR_5g007230 | 45.926 | 135 | 72 | 1 | 8 | 141 | 21 | 155 | 1.21e-38 | 135 |
| MS.gene041387.t1 | MTR_4g078170 | 48.819 | 127 | 64 | 1 | 8 | 133 | 15 | 141 | 7.38e-38 | 133 |
| MS.gene041387.t1 | MTR_8g066820 | 48.462 | 130 | 66 | 1 | 5 | 133 | 30 | 159 | 1.23e-37 | 133 |
| MS.gene041387.t1 | MTR_5g030130 | 44.444 | 144 | 79 | 1 | 5 | 147 | 32 | 175 | 3.05e-36 | 130 |
| MS.gene041387.t1 | MTR_5g030130 | 48.462 | 130 | 66 | 1 | 5 | 133 | 32 | 161 | 5.87e-36 | 127 |
| MS.gene041387.t1 | MTR_7g102790 | 42.647 | 136 | 74 | 1 | 8 | 139 | 7 | 142 | 2.12e-32 | 119 |
| MS.gene041387.t1 | MTR_1g062160 | 42.188 | 128 | 72 | 2 | 8 | 133 | 7 | 134 | 9.82e-29 | 109 |
| MS.gene041387.t1 | MTR_2g084525 | 39.007 | 141 | 76 | 4 | 8 | 138 | 5 | 145 | 8.77e-24 | 97.4 |
| MS.gene041387.t1 | MTR_8g105930 | 32.704 | 159 | 80 | 4 | 1 | 133 | 1 | 158 | 5.73e-21 | 89.7 |
| MS.gene041387.t1 | MTR_2g084495 | 37.857 | 140 | 76 | 4 | 10 | 138 | 6 | 145 | 3.30e-20 | 87.4 |
| MS.gene041387.t1 | MTR_2g084510 | 34.752 | 141 | 82 | 4 | 8 | 138 | 4 | 144 | 1.77e-19 | 85.5 |
| MS.gene041387.t1 | MTR_2g060500 | 37.313 | 134 | 73 | 5 | 10 | 132 | 12 | 145 | 7.67e-18 | 79.0 |
| MS.gene041387.t1 | MTR_2g060540 | 37.956 | 137 | 74 | 6 | 10 | 135 | 12 | 148 | 1.07e-17 | 78.6 |
| MS.gene041387.t1 | MTR_8g097310 | 33.929 | 112 | 66 | 2 | 36 | 145 | 2 | 107 | 2.04e-14 | 69.7 |
| MS.gene041387.t1 | MTR_5g077740 | 28.571 | 140 | 90 | 3 | 7 | 144 | 22 | 153 | 6.27e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041387.t1 | AT2G12646 | 69.863 | 219 | 56 | 3 | 3 | 211 | 1 | 219 | 2.56e-105 | 307 |
| MS.gene041387.t1 | AT2G12646 | 69.863 | 219 | 56 | 3 | 3 | 211 | 1 | 219 | 2.56e-105 | 307 |
| MS.gene041387.t1 | AT2G12646 | 69.767 | 215 | 55 | 3 | 7 | 211 | 2 | 216 | 5.09e-103 | 301 |
| MS.gene041387.t1 | AT3G60670 | 49.537 | 216 | 86 | 3 | 8 | 212 | 7 | 210 | 1.33e-66 | 208 |
| MS.gene041387.t1 | AT1G31040 | 63.830 | 141 | 50 | 1 | 7 | 147 | 18 | 157 | 1.11e-57 | 185 |
| MS.gene041387.t1 | AT1G32700 | 48.485 | 132 | 67 | 1 | 8 | 138 | 12 | 143 | 4.70e-36 | 129 |
| MS.gene041387.t1 | AT4G17900 | 46.565 | 131 | 68 | 2 | 5 | 133 | 31 | 161 | 3.97e-35 | 127 |
| MS.gene041387.t1 | AT4G17900 | 46.565 | 131 | 68 | 2 | 5 | 133 | 17 | 147 | 4.07e-35 | 126 |
| MS.gene041387.t1 | AT1G21000 | 45.652 | 138 | 72 | 2 | 8 | 144 | 16 | 151 | 1.30e-33 | 123 |
| MS.gene041387.t1 | AT1G21000 | 45.652 | 138 | 72 | 2 | 8 | 144 | 13 | 148 | 1.33e-33 | 123 |
| MS.gene041387.t1 | AT1G76590 | 46.457 | 127 | 67 | 1 | 8 | 133 | 18 | 144 | 4.50e-33 | 122 |
| MS.gene041387.t1 | AT1G43000 | 43.077 | 130 | 73 | 1 | 8 | 136 | 16 | 145 | 4.88e-32 | 118 |
| MS.gene041387.t1 | AT1G43000 | 43.077 | 130 | 73 | 1 | 8 | 136 | 9 | 138 | 6.24e-32 | 118 |
| MS.gene041387.t1 | AT5G46710 | 41.985 | 131 | 74 | 2 | 5 | 133 | 25 | 155 | 3.11e-29 | 109 |
| MS.gene041387.t1 | AT5G46710 | 41.985 | 131 | 74 | 2 | 5 | 133 | 9 | 139 | 6.58e-29 | 110 |
| MS.gene041387.t1 | AT5G46710 | 41.985 | 131 | 74 | 2 | 5 | 133 | 25 | 155 | 7.87e-29 | 110 |
| MS.gene041387.t1 | AT2G01818 | 39.310 | 145 | 78 | 3 | 7 | 141 | 10 | 154 | 5.59e-28 | 107 |
| MS.gene041387.t1 | AT2G27930 | 41.844 | 141 | 71 | 3 | 6 | 135 | 2 | 142 | 9.37e-28 | 105 |
| MS.gene041387.t1 | AT2G27930 | 41.844 | 141 | 71 | 3 | 6 | 135 | 2 | 142 | 9.37e-28 | 105 |
| MS.gene041387.t1 | AT2G27930 | 41.429 | 140 | 71 | 3 | 6 | 134 | 2 | 141 | 4.02e-27 | 104 |
| MS.gene041387.t1 | AT2G27930 | 41.429 | 140 | 71 | 3 | 6 | 134 | 2 | 141 | 4.02e-27 | 104 |
| MS.gene041387.t1 | AT1G32700 | 49.020 | 102 | 51 | 1 | 38 | 138 | 3 | 104 | 5.48e-26 | 101 |
| MS.gene041387.t1 | AT2G27930 | 44.186 | 86 | 39 | 1 | 58 | 134 | 59 | 144 | 6.10e-17 | 77.8 |
| MS.gene041387.t1 | AT2G27930 | 44.186 | 86 | 39 | 1 | 58 | 134 | 59 | 144 | 6.10e-17 | 77.8 |
| MS.gene041387.t1 | AT2G01818 | 36.471 | 85 | 48 | 2 | 63 | 141 | 6 | 90 | 4.38e-12 | 63.5 |
Find 63 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTACTAACTTCAAACGCTAT+TGG | 0.249046 | 8.2:+12794220 | MS.gene041387:CDS |
| TACTAACTTCAAACGCTATT+GGG | 0.295831 | 8.2:+12794221 | MS.gene041387:CDS |
| CCAAGAGAGCAATGGATAAA+AGG | 0.296836 | 8.2:-12790234 | None:intergenic |
| TGGAAGATTGGCCATGAATA+AGG | 0.299906 | 8.2:-12794180 | None:intergenic |
| CAACGATCCTTTGGATGATT+TGG | 0.309311 | 8.2:-12794279 | None:intergenic |
| CTTCCAACCATGCAGGCTTT+TGG | 0.312977 | 8.2:-12789708 | None:intergenic |
| GAATGGAGGCTTTGGAAGAT+TGG | 0.316846 | 8.2:-12794192 | None:intergenic |
| CTCAATCAATGGTGATACTA+TGG | 0.339732 | 8.2:-12794302 | None:intergenic |
| TCAGATTTACACCTTATTCA+TGG | 0.342533 | 8.2:+12794169 | MS.gene041387:CDS |
| TATACAGAAAAGTTCTTTGT+TGG | 0.345795 | 8.2:+12789736 | MS.gene041387:CDS |
| AAGACCTTTCACCCTACTTA+AGG | 0.378382 | 8.2:+12790789 | MS.gene041387:CDS |
| GATCCAATGAGTTCATATTC+AGG | 0.387250 | 8.2:+12790908 | MS.gene041387:CDS |
| ATACTATGGCAACGATCCTT+TGG | 0.400350 | 8.2:-12794288 | None:intergenic |
| GATAGTCAGGACTTAATTGT+AGG | 0.404339 | 8.2:-12790823 | None:intergenic |
| AGCAATGGATAAAAGGTTCT+TGG | 0.405041 | 8.2:-12790227 | None:intergenic |
| TTATCATGATGTTCTTAGAT+TGG | 0.410755 | 8.2:+12789888 | MS.gene041387:CDS |
| TTCCTGATCCTTTGAATTGG+CGG | 0.427487 | 8.2:-12790176 | None:intergenic |
| TGGCATGCACAGAAATTGTT+AGG | 0.429624 | 8.2:+12790960 | MS.gene041387:CDS |
| TCATATTCAGGATCATCATC+AGG | 0.433500 | 8.2:+12790920 | MS.gene041387:CDS |
| TCTTGTGGAATTAGATAGTC+AGG | 0.440473 | 8.2:-12790836 | None:intergenic |
| AGTTTCCTGATCCTTTGAAT+TGG | 0.442272 | 8.2:-12790179 | None:intergenic |
| TATTTGGACGAAGTTTGAAA+TGG | 0.450156 | 8.2:-12792341 | None:intergenic |
| CTTCTTGATGAACACCACTT+TGG | 0.453482 | 8.2:-12790142 | None:intergenic |
| TATTGGAGGTTCTCAATCAA+TGG | 0.454121 | 8.2:-12794313 | None:intergenic |
| TTTGGCACTATTGATAGTAT+AGG | 0.459040 | 8.2:-12790124 | None:intergenic |
| AACCGCCAATTCAAAGGATC+AGG | 0.462617 | 8.2:+12790174 | MS.gene041387:CDS |
| GATCCTGAATATGAACTCAT+TGG | 0.472047 | 8.2:-12790911 | None:intergenic |
| AGTCTTCATATATATGATCA+TGG | 0.477545 | 8.2:+12789573 | None:intergenic |
| AAACCAAAAGCCTGCATGGT+TGG | 0.480103 | 8.2:+12789705 | MS.gene041387:CDS |
| GGTCTTGCATATCCTTAAGT+AGG | 0.485067 | 8.2:-12790801 | None:intergenic |
| ATTGTTAGGAAGAGAAGAAG+TGG | 0.501836 | 8.2:+12790974 | MS.gene041387:CDS |
| CCATTGCTCTCTTGGATGCA+AGG | 0.504085 | 8.2:+12790242 | MS.gene041387:CDS |
| CTATCTAATTCCACAAGAGA+TGG | 0.516025 | 8.2:+12790841 | MS.gene041387:CDS |
| TATCTAATTCCACAAGAGAT+GGG | 0.519713 | 8.2:+12790842 | MS.gene041387:CDS |
| AATCTGAAGCAGGTAGCAAA+AGG | 0.521524 | 8.2:-12794153 | None:intergenic |
| GTAGACGAAATCAGAAATGT+TGG | 0.523242 | 8.2:-12794255 | None:intergenic |
| AATGACAAGGTCAACAATTG+TGG | 0.532726 | 8.2:+12790877 | MS.gene041387:CDS |
| CCTCAAAACCGCCAATTCAA+AGG | 0.532742 | 8.2:+12790168 | MS.gene041387:CDS |
| GTCTTGCATATCCTTAAGTA+GGG | 0.540564 | 8.2:-12790800 | None:intergenic |
| AGGCGGTGGTAGCGATGAGA+TGG | 0.543611 | 8.2:-12789844 | None:intergenic |
| AATGGATAAAAGGTTCTTGG+AGG | 0.548499 | 8.2:-12790224 | None:intergenic |
| ATAGTCAGGACTTAATTGTA+GGG | 0.550330 | 8.2:-12790822 | None:intergenic |
| TAAAGAGCTTCCAACCATGC+AGG | 0.552228 | 8.2:-12789715 | None:intergenic |
| TATAGACTGCACCAATGTCC+AGG | 0.557416 | 8.2:+12789927 | MS.gene041387:CDS |
| TACTATCAATAGTGCCAAAG+TGG | 0.558364 | 8.2:+12790128 | MS.gene041387:CDS |
| ATAAGGTGTAAATCTGAAGC+AGG | 0.568956 | 8.2:-12794163 | None:intergenic |
| ATCTAATTCCACAAGAGATG+GGG | 0.572263 | 8.2:+12790843 | MS.gene041387:CDS |
| CTGAAGCAGGTAGCAAAAGG+AGG | 0.575288 | 8.2:-12794150 | None:intergenic |
| TTAGGAAGAGAAGAAGTGGA+TGG | 0.575841 | 8.2:+12790978 | MS.gene041387:CDS |
| AGGGAAACCAAAAGCCTGCA+TGG | 0.579853 | 8.2:+12789701 | MS.gene041387:intron |
| CATAACGACGAACTTGAAGA+AGG | 0.581891 | 8.2:-12789864 | None:intergenic |
| ATATCCTTAAGTAGGGTGAA+AGG | 0.612227 | 8.2:-12790793 | None:intergenic |
| GTCTACACCAAATCATCCAA+AGG | 0.617908 | 8.2:+12794272 | MS.gene041387:CDS |
| CCTTGCATCCAAGAGAGCAA+TGG | 0.619111 | 8.2:-12790242 | None:intergenic |
| CGATGAGATGGAAAGCAATG+AGG | 0.624526 | 8.2:-12789832 | None:intergenic |
| CATATTCAGGATCATCATCA+GGG | 0.632732 | 8.2:+12790921 | MS.gene041387:CDS |
| TGAAGCAGGTAGCAAAAGGA+GGG | 0.640976 | 8.2:-12794149 | None:intergenic |
| AGGGTCAGAGAATATGAGCA+TGG | 0.657131 | 8.2:+12790940 | MS.gene041387:CDS |
| TCTAATTCCACAAGAGATGG+GGG | 0.658047 | 8.2:+12790844 | MS.gene041387:CDS |
| GACGAACTTGAAGAAGGCGG+TGG | 0.658588 | 8.2:-12789858 | None:intergenic |
| ATGTATATGTACCTGGACAT+TGG | 0.663071 | 8.2:-12789938 | None:intergenic |
| GGGATGAATTAGAAATGACA+AGG | 0.706223 | 8.2:+12790864 | MS.gene041387:CDS |
| AACGACGAACTTGAAGAAGG+CGG | 0.734968 | 8.2:-12789861 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATTATACATAGTATTA+TGG | + | chr8.2:12790272-12790291 | MS.gene041387:intron | 10.0% |
| !! | CATAAAAAATACTAAAAAAA+AGG | - | chr8.2:12790339-12790358 | None:intergenic | 10.0% |
| !! | TAAGTAATTTCATATTAATA+TGG | + | chr8.2:12791386-12791405 | MS.gene041387:intron | 10.0% |
| !! | TTGAAAATTAACAAAAATAT+TGG | + | chr8.2:12791475-12791494 | MS.gene041387:intron | 10.0% |
| !!! | ACTTAGTATATTTAATTTAT+AGG | - | chr8.2:12792488-12792507 | None:intergenic | 10.0% |
| !!! | ATAAAGTGTTTTTTTTTTAT+AGG | + | chr8.2:12791801-12791820 | MS.gene041387:intron | 10.0% |
| !!! | ATAAATTTTAGATTTGTTAA+GGG | - | chr8.2:12792541-12792560 | None:intergenic | 10.0% |
| !!! | CAAATCTAAAATTTATATTA+AGG | + | chr8.2:12792545-12792564 | MS.gene041387:intron | 10.0% |
| !!! | CATTTTTTATATTTAGAATA+AGG | - | chr8.2:12793970-12793989 | None:intergenic | 10.0% |
| !!! | CTTAGTATATTTAATTTATA+GGG | - | chr8.2:12792487-12792506 | None:intergenic | 10.0% |
| !!! | CTTTTTTTTAGTATTTTTTA+TGG | + | chr8.2:12790337-12790356 | MS.gene041387:intron | 10.0% |
| !!! | TAAAGTGTTTTTTTTTTATA+GGG | + | chr8.2:12791802-12791821 | MS.gene041387:intron | 10.0% |
| !!! | TATAAATTTTAGATTTGTTA+AGG | - | chr8.2:12792542-12792561 | None:intergenic | 10.0% |
| !! | GGTAAAAAAAATATATTTAG+AGG | - | chr8.2:12791583-12791602 | None:intergenic | 15.0% |
| !! | TATTCGGTTAAAAATATATT+TGG | - | chr8.2:12792360-12792379 | None:intergenic | 15.0% |
| !! | TCAAAATTCTTATATATTGA+TGG | + | chr8.2:12789634-12789653 | MS.gene041387:intron | 15.0% |
| !! | TGAATTACATAAGATTTAAT+TGG | - | chr8.2:12790046-12790065 | None:intergenic | 15.0% |
| !! | TTGGTTAAAATGATTTAATT+TGG | + | chr8.2:12789665-12789684 | MS.gene041387:intron | 15.0% |
| !!! | AACTTTATTGCTATTATTAT+TGG | - | chr8.2:12791029-12791048 | None:intergenic | 15.0% |
| !!! | AATTTGGTAATTGTTAATAT+AGG | + | chr8.2:12789681-12789700 | MS.gene041387:intron | 15.0% |
| !!! | ATATATTTTTAACCGAATAA+AGG | + | chr8.2:12792361-12792380 | MS.gene041387:CDS | 15.0% |
| !!! | ATTTGGTAATTGTTAATATA+GGG | + | chr8.2:12789682-12789701 | MS.gene041387:intron | 15.0% |
| !!! | TACATATTTTTTTTATGAGA+AGG | - | chr8.2:12790561-12790580 | None:intergenic | 15.0% |
| !!! | TAGCTTAATTTTATTGATTA+AGG | - | chr8.2:12791137-12791156 | None:intergenic | 15.0% |
| !!! | TTTTAATTTCTGATTGAAAA+AGG | + | chr8.2:12790078-12790097 | MS.gene041387:intron | 15.0% |
| !!! | TTTTTGTTTAATTAATCACT+TGG | + | chr8.2:12791298-12791317 | MS.gene041387:intron | 15.0% |
| !! | AAAAACCCAAATAAACTAAT+TGG | - | chr8.2:12793725-12793744 | None:intergenic | 20.0% |
| !! | AAAAAGACTTAAGAAAACAA+AGG | - | chr8.2:12789611-12789630 | None:intergenic | 20.0% |
| !! | AAAAGACTTAAGAAAACAAA+GGG | - | chr8.2:12789610-12789629 | None:intergenic | 20.0% |
| !! | AAATCTTATGTAATTCAACA+TGG | + | chr8.2:12790049-12790068 | MS.gene041387:intron | 20.0% |
| !! | AACTCATTGAATTAAATGAT+TGG | + | chr8.2:12790387-12790406 | MS.gene041387:intron | 20.0% |
| !! | ACATTGAACATATGATTAAA+TGG | - | chr8.2:12791639-12791658 | None:intergenic | 20.0% |
| !! | ATGAGCATAAATGAATTTAA+TGG | - | chr8.2:12790629-12790648 | None:intergenic | 20.0% |
| !! | ATGATGATTATACCAATTTA+GGG | - | chr8.2:12791716-12791735 | None:intergenic | 20.0% |
| !! | ATGGTTTATACATAGAATTA+TGG | + | chr8.2:12790291-12790310 | MS.gene041387:intron | 20.0% |
| !! | ATTCGATATCATAATTTACA+TGG | - | chr8.2:12792073-12792092 | None:intergenic | 20.0% |
| !! | TACGTATAACAAAACAATTA+TGG | + | chr8.2:12792642-12792661 | MS.gene041387:intron | 20.0% |
| !! | TATGATGATTATACCAATTT+AGG | - | chr8.2:12791717-12791736 | None:intergenic | 20.0% |
| !! | TGTAAAGAAGTTGAAAATTT+CGG | + | chr8.2:12792785-12792804 | MS.gene041387:intron | 20.0% |
| !! | TTAAAATATCACATACTTGA+AGG | + | chr8.2:12791550-12791569 | MS.gene041387:intron | 20.0% |
| !!! | AAACATTTTACCTTTTAGAA+GGG | + | chr8.2:12792318-12792337 | MS.gene041387:intron | 20.0% |
| !!! | AATCTACGTTTTTTCTTTAA+CGG | - | chr8.2:12792243-12792262 | None:intergenic | 20.0% |
| !!! | ATATATTTTTTTTACCAGCA+AGG | + | chr8.2:12791587-12791606 | MS.gene041387:intron | 20.0% |
| !!! | ATATGCTTAATTTGATCATA+TGG | + | chr8.2:12790726-12790745 | MS.gene041387:intron | 20.0% |
| !!! | CTTCATATTTTACCTTTATT+CGG | - | chr8.2:12792376-12792395 | None:intergenic | 20.0% |
| !!! | GTGTTTCTATTTATTGATTT+TGG | + | chr8.2:12793673-12793692 | MS.gene041387:intron | 20.0% |
| !!! | TATTTTAAAAATGATTCCCA+TGG | + | chr8.2:12792903-12792922 | MS.gene041387:intron | 20.0% |
| !!! | TTTTTCTTCTTCTTATAAGT+GGG | - | chr8.2:12793912-12793931 | None:intergenic | 20.0% |
| !!! | TTTTTTCTTCTTCTTATAAG+TGG | - | chr8.2:12793913-12793932 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTCTTTGATACAC+AGG | + | chr8.2:12793740-12793759 | MS.gene041387:intron | 20.0% |
| ! | AAAAAAAAAAATGATTCCCG+TGG | + | chr8.2:12793853-12793872 | MS.gene041387:intron | 25.0% |
| ! | AAAAAAAAAACTTGACCCAT+TGG | + | chr8.2:12791753-12791772 | MS.gene041387:intron | 25.0% |
| ! | AATTGAGCACATATATTGAT+TGG | + | chr8.2:12790454-12790473 | MS.gene041387:intron | 25.0% |
| ! | ACATCACATAATTTACGTAT+AGG | - | chr8.2:12792098-12792117 | None:intergenic | 25.0% |
| ! | AGTATGATTAGTAGAAGAAA+AGG | + | chr8.2:12791070-12791089 | MS.gene041387:intron | 25.0% |
| ! | CATATGGAGTATATATTTGT+AGG | + | chr8.2:12790742-12790761 | MS.gene041387:intron | 25.0% |
| ! | GTAAAGAAGTTGAAAATTTC+GGG | + | chr8.2:12792786-12792805 | MS.gene041387:intron | 25.0% |
| ! | TAAAGTTTCTGATGAAGATA+TGG | + | chr8.2:12791042-12791061 | MS.gene041387:intron | 25.0% |
| ! | TAAATGTACATACCATAACT+TGG | - | chr8.2:12791364-12791383 | None:intergenic | 25.0% |
| ! | TAATCTAAGAGCTAATAGAT+TGG | + | chr8.2:12791612-12791631 | MS.gene041387:intron | 25.0% |
| ! | TATACAGAAAAGTTCTTTGT+TGG | + | chr8.2:12789736-12789755 | MS.gene041387:CDS | 25.0% |
| ! | TGAAGTTAGTAGAAAAAGAA+TGG | - | chr8.2:12794212-12794231 | None:intergenic | 25.0% |
| ! | TGTTGGATTGAATTAATGTA+TGG | + | chr8.2:12791921-12791940 | MS.gene041387:intron | 25.0% |
| ! | TGTTTAATTAATCACTTGGT+CGG | + | chr8.2:12791302-12791321 | MS.gene041387:intron | 25.0% |
| ! | TTAATCATATGTTCAATGTC+CGG | + | chr8.2:12791640-12791659 | MS.gene041387:intron | 25.0% |
| ! | TTATCATGATGTTCTTAGAT+TGG | + | chr8.2:12789888-12789907 | MS.gene041387:CDS | 25.0% |
| !! | CAAACATTTTACCTTTTAGA+AGG | + | chr8.2:12792317-12792336 | MS.gene041387:intron | 25.0% |
| !! | CGTTTCCAATTAGTTTATTT+GGG | + | chr8.2:12793717-12793736 | MS.gene041387:intron | 25.0% |
| !! | TAACAGGCATAAAATTTGTT+GGG | + | chr8.2:12792731-12792750 | MS.gene041387:intron | 25.0% |
| !! | TTGTAAATCCTCGATAATTT+TGG | - | chr8.2:12792602-12792621 | None:intergenic | 25.0% |
| !! | TTTGAATTATGTTGTTTACC+AGG | + | chr8.2:12790101-12790120 | MS.gene041387:intron | 25.0% |
| !!! | AGTGTTAGTTTTTTTGTTGT+AGG | + | chr8.2:12794113-12794132 | MS.gene041387:intron | 25.0% |
| !!! | ATATTATTTTTCCCACTACT+CGG | - | chr8.2:12791854-12791873 | None:intergenic | 25.0% |
| !!! | GATAATTTTGGTGATTATCT+CGG | - | chr8.2:12792590-12792609 | None:intergenic | 25.0% |
| !!! | TATATTGATGGCTACAATTT+TGG | + | chr8.2:12789646-12789665 | MS.gene041387:intron | 25.0% |
| AAGTATGTGTGCAAAATTCA+TGG | + | chr8.2:12791003-12791022 | MS.gene041387:intron | 30.0% | |
| ACATACCATAACTTGGAATT+GGG | - | chr8.2:12791357-12791376 | None:intergenic | 30.0% | |
| ACCTCAATAACCATATAGTT+AGG | - | chr8.2:12792459-12792478 | None:intergenic | 30.0% | |
| AGTTAGTAGAAAAAGAATGG+AGG | - | chr8.2:12794209-12794228 | None:intergenic | 30.0% | |
| ATAGTCAGGACTTAATTGTA+GGG | - | chr8.2:12790825-12790844 | None:intergenic | 30.0% | |
| ATCTTAACCCATACATAGAT+TGG | - | chr8.2:12793791-12793810 | None:intergenic | 30.0% | |
| ATGGAGTATATATTTGTAGG+TGG | + | chr8.2:12790745-12790764 | MS.gene041387:intron | 30.0% | |
| ATGTGACCGTTATAAATCAA+GGG | + | chr8.2:12790519-12790538 | MS.gene041387:intron | 30.0% | |
| ATTGAACATGTATATGTACC+TGG | - | chr8.2:12789948-12789967 | None:intergenic | 30.0% | |
| CTAACAGGCATAAAATTTGT+TGG | + | chr8.2:12792730-12792749 | MS.gene041387:intron | 30.0% | |
| GAAAGTAGTTAACCCTAAAT+TGG | + | chr8.2:12791701-12791720 | MS.gene041387:intron | 30.0% | |
| GATAATCACCAAAATTATCG+AGG | + | chr8.2:12792591-12792610 | MS.gene041387:intron | 30.0% | |
| GATTTATTCTAGTCAAAAGC+AGG | - | chr8.2:12791455-12791474 | None:intergenic | 30.0% | |
| GCTAACACTAATTAACAAAG+AGG | - | chr8.2:12791112-12791131 | None:intergenic | 30.0% | |
| GTGATGTCTAAATATATGCT+AGG | + | chr8.2:12792111-12792130 | MS.gene041387:intron | 30.0% | |
| GTTGTTAACATGTAGAGTTA+TGG | - | chr8.2:12792819-12792838 | None:intergenic | 30.0% | |
| GTTTAATTAATCACTTGGTC+GGG | + | chr8.2:12791303-12791322 | MS.gene041387:intron | 30.0% | |
| TACATACCATAACTTGGAAT+TGG | - | chr8.2:12791358-12791377 | None:intergenic | 30.0% | |
| TACTAACTTCAAACGCTATT+GGG | + | chr8.2:12794221-12794240 | MS.gene041387:CDS | 30.0% | |
| TATATATATGCATGCATGCT+AGG | + | chr8.2:12792215-12792234 | MS.gene041387:intron | 30.0% | |
| TATCTAATTCCACAAGAGAT+GGG | + | chr8.2:12790842-12790861 | MS.gene041387:CDS | 30.0% | |
| TATGAAAAGTGAAGACGAAT+AGG | + | chr8.2:12791871-12791890 | MS.gene041387:intron | 30.0% | |
| TATGTGACCGTTATAAATCA+AGG | + | chr8.2:12790518-12790537 | MS.gene041387:intron | 30.0% | |
| TATTTGGACGAAGTTTGAAA+TGG | - | chr8.2:12792344-12792363 | None:intergenic | 30.0% | |
| TCAGATTTACACCTTATTCA+TGG | + | chr8.2:12794169-12794188 | MS.gene041387:CDS | 30.0% | |
| TCTTAACCCATACATAGATT+GGG | - | chr8.2:12793790-12793809 | None:intergenic | 30.0% | |
| TTATCGAGGATTTACAATTG+AGG | + | chr8.2:12792605-12792624 | MS.gene041387:intron | 30.0% | |
| TTTAATTAATCACTTGGTCG+GGG | + | chr8.2:12791304-12791323 | MS.gene041387:intron | 30.0% | |
| ! | AAAATTCCGATTTGAAACCA+CGG | - | chr8.2:12793873-12793892 | None:intergenic | 30.0% |
| ! | ACAATTTGAAGCACAAGATA+TGG | + | chr8.2:12790666-12790685 | MS.gene041387:intron | 30.0% |
| ! | ATATTTTGTACCGTATCCAA+TGG | - | chr8.2:12791772-12791791 | None:intergenic | 30.0% |
| ! | CAATTTGAAGCACAAGATAT+GGG | + | chr8.2:12790667-12790686 | MS.gene041387:intron | 30.0% |
| ! | GCGTTTCCAATTAGTTTATT+TGG | + | chr8.2:12793716-12793735 | MS.gene041387:intron | 30.0% |
| ! | TATGATGGTACAATGGTTTT+TGG | + | chr8.2:12793384-12793403 | MS.gene041387:intron | 30.0% |
| ! | TATTTTGTACCGTATCCAAT+GGG | - | chr8.2:12791771-12791790 | None:intergenic | 30.0% |
| ! | TGGTTTCAAATCGGAATTTT+TGG | + | chr8.2:12793873-12793892 | MS.gene041387:intron | 30.0% |
| ! | TTCATTTTCTCTCTTTGTTG+TGG | + | chr8.2:12792973-12792992 | MS.gene041387:intron | 30.0% |
| ! | TTCTTACGTAGACTATTTTC+AGG | + | chr8.2:12792428-12792447 | MS.gene041387:intron | 30.0% |
| ! | TTTGGCACTATTGATAGTAT+AGG | - | chr8.2:12790127-12790146 | None:intergenic | 30.0% |
| ! | TTTTATCACTAGATCGAAAC+CGG | - | chr8.2:12791662-12791681 | None:intergenic | 30.0% |
| !! | AACAGGCATAAAATTTGTTG+GGG | + | chr8.2:12792732-12792751 | MS.gene041387:intron | 30.0% |
| !!! | AGTTTTTTTGTTGTAGGTAG+AGG | + | chr8.2:12794119-12794138 | MS.gene041387:intron | 30.0% |
| !!! | CATTCTTTTTTGCATTCTCA+TGG | - | chr8.2:12789771-12789790 | None:intergenic | 30.0% |
| !!! | TTATGGTTTTGATGGATCTA+TGG | + | chr8.2:12793083-12793102 | MS.gene041387:intron | 30.0% |
| AAAACTTGACCCATTGGATA+CGG | + | chr8.2:12791759-12791778 | MS.gene041387:intron | 35.0% | |
| AACAAAGAGGAGATCTATGA+GGG | - | chr8.2:12791099-12791118 | None:intergenic | 35.0% | |
| AATGACAAGGTCAACAATTG+TGG | + | chr8.2:12790877-12790896 | MS.gene041387:CDS | 35.0% | |
| AATGGATAAAAGGTTCTTGG+AGG | - | chr8.2:12790227-12790246 | None:intergenic | 35.0% | |
| AGCAATGGATAAAAGGTTCT+TGG | - | chr8.2:12790230-12790249 | None:intergenic | 35.0% | |
| AGGGTTAACTACTTTCTCAA+CGG | - | chr8.2:12791697-12791716 | None:intergenic | 35.0% | |
| AGTTTCCTGATCCTTTGAAT+TGG | - | chr8.2:12790182-12790201 | None:intergenic | 35.0% | |
| ATATCCTTAAGTAGGGTGAA+AGG | - | chr8.2:12790796-12790815 | None:intergenic | 35.0% | |
| ATCTAATTCCACAAGAGATG+GGG | + | chr8.2:12790843-12790862 | MS.gene041387:CDS | 35.0% | |
| ATGTATATGTACCTGGACAT+TGG | - | chr8.2:12789941-12789960 | None:intergenic | 35.0% | |
| ATTGTTAGGAAGAGAAGAAG+TGG | + | chr8.2:12790974-12790993 | MS.gene041387:CDS | 35.0% | |
| CATATTCAGGATCATCATCA+GGG | + | chr8.2:12790921-12790940 | MS.gene041387:CDS | 35.0% | |
| CATTGTACCATCATACAACA+AGG | - | chr8.2:12793379-12793398 | None:intergenic | 35.0% | |
| CGGTATCCCTTGATTTATAA+CGG | - | chr8.2:12790528-12790547 | None:intergenic | 35.0% | |
| CTACTAACTTCAAACGCTAT+TGG | + | chr8.2:12794220-12794239 | MS.gene041387:CDS | 35.0% | |
| CTATCTAATTCCACAAGAGA+TGG | + | chr8.2:12790841-12790860 | MS.gene041387:CDS | 35.0% | |
| GATAGTCAGGACTTAATTGT+AGG | - | chr8.2:12790826-12790845 | None:intergenic | 35.0% | |
| GATCCAATGAGTTCATATTC+AGG | + | chr8.2:12790908-12790927 | MS.gene041387:CDS | 35.0% | |
| GATCCTGAATATGAACTCAT+TGG | - | chr8.2:12790914-12790933 | None:intergenic | 35.0% | |
| GCCTAACTATATGGTTATTG+AGG | + | chr8.2:12792455-12792474 | MS.gene041387:intron | 35.0% | |
| GGGATGAATTAGAAATGACA+AGG | + | chr8.2:12790864-12790883 | MS.gene041387:CDS | 35.0% | |
| GTAGACGAAATCAGAAATGT+TGG | - | chr8.2:12794258-12794277 | None:intergenic | 35.0% | |
| GTATGGTTCATCATCTTAAG+TGG | + | chr8.2:12791938-12791957 | MS.gene041387:intron | 35.0% | |
| GTCTTGCATATCCTTAAGTA+GGG | - | chr8.2:12790803-12790822 | None:intergenic | 35.0% | |
| TAACAAAGAGGAGATCTATG+AGG | - | chr8.2:12791100-12791119 | None:intergenic | 35.0% | |
| TACTATCAATAGTGCCAAAG+TGG | + | chr8.2:12790128-12790147 | MS.gene041387:CDS | 35.0% | |
| TAGAAAAAGAATGGAGGCTT+TGG | - | chr8.2:12794203-12794222 | None:intergenic | 35.0% | |
| TATGAGAAGGAAACTGAACT+CGG | - | chr8.2:12790548-12790567 | None:intergenic | 35.0% | |
| TCATATTCAGGATCATCATC+AGG | + | chr8.2:12790920-12790939 | MS.gene041387:CDS | 35.0% | |
| TCTTGTGGAATTAGATAGTC+AGG | - | chr8.2:12790839-12790858 | None:intergenic | 35.0% | |
| TGATTCCCAATTCCAAGTTA+TGG | + | chr8.2:12791349-12791368 | MS.gene041387:intron | 35.0% | |
| TGTTAGATAGAAACCAATCG+TGG | - | chr8.2:12792716-12792735 | None:intergenic | 35.0% | |
| TTAATTAATCACTTGGTCGG+GGG | + | chr8.2:12791305-12791324 | MS.gene041387:intron | 35.0% | |
| TTCAACACTCATTCTTCTGT+TGG | + | chr8.2:12791904-12791923 | MS.gene041387:intron | 35.0% | |
| TTCTTATAAGTGGGACAAAG+CGG | - | chr8.2:12793903-12793922 | None:intergenic | 35.0% | |
| ! | AAATTCCGATTTGAAACCAC+GGG | - | chr8.2:12793872-12793891 | None:intergenic | 35.0% |
| ! | AACAACCTTTGAAAAACAGC+CGG | - | chr8.2:12793492-12793511 | None:intergenic | 35.0% |
| ! | ATAAGGTGTAAATCTGAAGC+AGG | - | chr8.2:12794166-12794185 | None:intergenic | 35.0% |
| ! | CTTGTTGTATGATGGTACAA+TGG | + | chr8.2:12793377-12793396 | MS.gene041387:intron | 35.0% |
| ! | TAAGGGCACACATCTATTTA+AGG | + | chr8.2:12792563-12792582 | MS.gene041387:intron | 35.0% |
| ! | TTTGAAATGGCCCTTCTAAA+AGG | - | chr8.2:12792331-12792350 | None:intergenic | 35.0% |
| !! | AACTCGATAAAGTGTTGATG+TGG | + | chr8.2:12791826-12791845 | MS.gene041387:intron | 35.0% |
| !! | ACGATTGGTTTCTATCTAAC+AGG | + | chr8.2:12792715-12792734 | MS.gene041387:intron | 35.0% |
| !! | CTTTTTACGTTGTTGTTCGA+GGG | + | chr8.2:12793525-12793544 | MS.gene041387:intron | 35.0% |
| !! | GTGTTTTCCTTGTTGTATGA+TGG | + | chr8.2:12793369-12793388 | MS.gene041387:intron | 35.0% |
| !! | TTATGTTGTTTCGTCGATCT+TGG | + | chr8.2:12793633-12793652 | MS.gene041387:intron | 35.0% |
| !! | TTTTCTCTCTTTGTTGTGGA+TGG | + | chr8.2:12792977-12792996 | MS.gene041387:intron | 35.0% |
| !!! | ATGGTACAATGGTTTTTGGT+TGG | + | chr8.2:12793388-12793407 | MS.gene041387:intron | 35.0% |
| !!! | GTGAACTGTTATGGTTTTGA+TGG | + | chr8.2:12793075-12793094 | MS.gene041387:intron | 35.0% |
| AACTACCGACAAACATCCAT+GGG | - | chr8.2:12792922-12792941 | None:intergenic | 40.0% | |
| AAGACCTTTCACCCTACTTA+AGG | + | chr8.2:12790789-12790808 | MS.gene041387:CDS | 40.0% | |
| ACAACCTTACAGCCTCTAAT+CGG | + | chr8.2:12792834-12792853 | MS.gene041387:intron | 40.0% | |
| ATACTATGGCAACGATCCTT+TGG | - | chr8.2:12794291-12794310 | None:intergenic | 40.0% | |
| CAAAAGCAGGATTCTTGACT+AGG | - | chr8.2:12791442-12791461 | None:intergenic | 40.0% | |
| CAACGATCCTTTGGATGATT+TGG | - | chr8.2:12794282-12794301 | None:intergenic | 40.0% | |
| CATAACGACGAACTTGAAGA+AGG | - | chr8.2:12789867-12789886 | None:intergenic | 40.0% | |
| CCAAGAGAGCAATGGATAAA+AGG | - | chr8.2:12790237-12790256 | None:intergenic | 40.0% | |
| CTTCTTGATGAACACCACTT+TGG | - | chr8.2:12790145-12790164 | None:intergenic | 40.0% | |
| GATGTTTGTCGGTAGTTGTT+TGG | + | chr8.2:12792925-12792944 | MS.gene041387:intron | 40.0% | |
| GGTCTTGCATATCCTTAAGT+AGG | - | chr8.2:12790804-12790823 | None:intergenic | 40.0% | |
| GTCTACACCAAATCATCCAA+AGG | + | chr8.2:12794272-12794291 | MS.gene041387:CDS | 40.0% | |
| TCAGGCTTTGCCTAACTATA+TGG | + | chr8.2:12792446-12792465 | MS.gene041387:intron | 40.0% | |
| TCTAATTCCACAAGAGATGG+GGG | + | chr8.2:12790844-12790863 | MS.gene041387:CDS | 40.0% | |
| TGATTCCCATGGATGTTTGT+CGG | + | chr8.2:12792914-12792933 | MS.gene041387:intron | 40.0% | |
| TGATTCCCGTGGTTTCAAAT+CGG | + | chr8.2:12793864-12793883 | MS.gene041387:intron | 40.0% | |
| TGCGAGTCTAACCACTAAAT+TGG | - | chr8.2:12792758-12792777 | None:intergenic | 40.0% | |
| TGGCATGCACAGAAATTGTT+AGG | + | chr8.2:12790960-12790979 | MS.gene041387:CDS | 40.0% | |
| TGTAAGTACAACCCGATTAG+AGG | - | chr8.2:12792849-12792868 | None:intergenic | 40.0% | |
| TTAGGAAGAGAAGAAGTGGA+TGG | + | chr8.2:12790978-12790997 | MS.gene041387:CDS | 40.0% | |
| TTCCTGATCCTTTGAATTGG+CGG | - | chr8.2:12790179-12790198 | None:intergenic | 40.0% | |
| TTTGGAGATAGCCCTTTGAT+AGG | + | chr8.2:12793691-12793710 | MS.gene041387:intron | 40.0% | |
| ! | AATCTGAAGCAGGTAGCAAA+AGG | - | chr8.2:12794156-12794175 | None:intergenic | 40.0% |
| ! | ACAACCTTTGAAAAACAGCC+GGG | - | chr8.2:12793491-12793510 | None:intergenic | 40.0% |
| ! | AGGGTTAATGGTGGTTTTTG+TGG | + | chr8.2:12793255-12793274 | MS.gene041387:intron | 40.0% |
| ! | ATTTGTTGGGGCCAATTTAG+TGG | + | chr8.2:12792744-12792763 | MS.gene041387:intron | 40.0% |
| ! | CACTATTGATAGTATAGGCC+TGG | - | chr8.2:12790122-12790141 | None:intergenic | 40.0% |
| ! | CAGGTGTATGAGTTTTCCAT+TGG | + | chr8.2:12793759-12793778 | MS.gene041387:intron | 40.0% |
| ! | CCTTTTATCCATTGCTCTCT+TGG | + | chr8.2:12790234-12790253 | MS.gene041387:CDS | 40.0% |
| ! | GTGGTGGTTAATGGTAGTTT+TGG | + | chr8.2:12793274-12793293 | MS.gene041387:intron | 40.0% |
| ! | GTGGTTTTTGTGGTGGTTAA+TGG | + | chr8.2:12793265-12793284 | MS.gene041387:intron | 40.0% |
| ! | GTGTATGAGTTTTCCATTGG+AGG | + | chr8.2:12793762-12793781 | MS.gene041387:intron | 40.0% |
| ! | GTTAATGGTGGTTTTTGTGG+TGG | + | chr8.2:12793258-12793277 | MS.gene041387:intron | 40.0% |
| ! | TGATGGATCTATGGTTGTGT+TGG | + | chr8.2:12793092-12793111 | MS.gene041387:intron | 40.0% |
| ! | TGGAAGATTGGCCATGAATA+AGG | - | chr8.2:12794183-12794202 | None:intergenic | 40.0% |
| ! | TGTCTTTTGGTGAGGGTTAA+TGG | + | chr8.2:12793243-12793262 | MS.gene041387:intron | 40.0% |
| !! | ATTCTTTGGGAGGTGTGTTT+TGG | + | chr8.2:12793419-12793438 | MS.gene041387:intron | 40.0% |
| !! | GCTTTTTACGTTGTTGTTCG+AGG | + | chr8.2:12793524-12793543 | MS.gene041387:intron | 40.0% |
| !! | TCTATGGTTGTGTTGGTTTG+TGG | + | chr8.2:12793099-12793118 | MS.gene041387:intron | 40.0% |
| !! | TGATTTTGGGTCTTTTGTGG+CGG | + | chr8.2:12793150-12793169 | MS.gene041387:intron | 40.0% |
| !! | TTCTTTGGGAGGTGTGTTTT+GGG | + | chr8.2:12793420-12793439 | MS.gene041387:intron | 40.0% |
| !!! | AGTGGTGTTGGTTTTTGTAG+TGG | + | chr8.2:12793310-12793329 | MS.gene041387:intron | 40.0% |
| !!! | GGTAGTTGTTTGGTTTTCGT+GGG | + | chr8.2:12792935-12792954 | MS.gene041387:intron | 40.0% |
| !!! | GTGGTTAATGGTAGTTTTGG+CGG | + | chr8.2:12793277-12793296 | MS.gene041387:intron | 40.0% |
| !!! | GTTGGCTTTTGCGATTCTTT+GGG | + | chr8.2:12793406-12793425 | MS.gene041387:intron | 40.0% |
| !!! | TATTCCCGGCTGTTTTTCAA+AGG | + | chr8.2:12793484-12793503 | MS.gene041387:intron | 40.0% |
| !!! | TGCTGATTTTGGGTCTTTTG+TGG | + | chr8.2:12793147-12793166 | MS.gene041387:intron | 40.0% |
| !!! | TTCATGGTGGTGCTGATTTT+GGG | + | chr8.2:12793137-12793156 | MS.gene041387:intron | 40.0% |
| !!! | TTGGTGTTGTCTTTTGGTGA+GGG | + | chr8.2:12793236-12793255 | MS.gene041387:intron | 40.0% |
| !!! | TTTCATGGTGGTGCTGATTT+TGG | + | chr8.2:12793136-12793155 | MS.gene041387:intron | 40.0% |
| AAACCAAAAGCCTGCATGGT+TGG | + | chr8.2:12789705-12789724 | MS.gene041387:CDS | 45.0% | |
| AACATAGACCCAAGTGACAG+CGG | + | chr8.2:12792672-12792691 | MS.gene041387:intron | 45.0% | |
| AACCGCCAATTCAAAGGATC+AGG | + | chr8.2:12790174-12790193 | MS.gene041387:CDS | 45.0% | |
| AACGACGAACTTGAAGAAGG+CGG | - | chr8.2:12789864-12789883 | None:intergenic | 45.0% | |
| AATTCATCCCCCATCTCTTG+TGG | - | chr8.2:12790854-12790873 | None:intergenic | 45.0% | |
| AGGGTCAGAGAATATGAGCA+TGG | + | chr8.2:12790940-12790959 | MS.gene041387:CDS | 45.0% | |
| CAACCTTACAGCCTCTAATC+GGG | + | chr8.2:12792835-12792854 | MS.gene041387:intron | 45.0% | |
| CAACTACCGACAAACATCCA+TGG | - | chr8.2:12792923-12792942 | None:intergenic | 45.0% | |
| CCTCAAAACCGCCAATTCAA+AGG | + | chr8.2:12790168-12790187 | MS.gene041387:CDS | 45.0% | |
| CGATGAGATGGAAAGCAATG+AGG | - | chr8.2:12789835-12789854 | None:intergenic | 45.0% | |
| GAGGCTCCCAATCTATGTAT+GGG | + | chr8.2:12793781-12793800 | MS.gene041387:intron | 45.0% | |
| GCTCTTAGATTACACCTTGC+TGG | - | chr8.2:12791604-12791623 | None:intergenic | 45.0% | |
| GGTTATGTTTGCTCGCACAT+AGG | + | chr8.2:12793001-12793020 | MS.gene041387:intron | 45.0% | |
| GGTTCGCTTGTGAACTGTTA+TGG | + | chr8.2:12793066-12793085 | MS.gene041387:intron | 45.0% | |
| TAAAGAGCTTCCAACCATGC+AGG | - | chr8.2:12789718-12789737 | None:intergenic | 45.0% | |
| TATAGACTGCACCAATGTCC+AGG | + | chr8.2:12789927-12789946 | MS.gene041387:CDS | 45.0% | |
| TATGTTTGCTCGCACATAGG+TGG | + | chr8.2:12793004-12793023 | MS.gene041387:intron | 45.0% | |
| TGAAGCAGGTAGCAAAAGGA+GGG | - | chr8.2:12794152-12794171 | None:intergenic | 45.0% | |
| TGGAAACGCCTCCTATCAAA+GGG | - | chr8.2:12793705-12793724 | None:intergenic | 45.0% | |
| TTGATGTGGAACCGAGTAGT+GGG | + | chr8.2:12791840-12791859 | MS.gene041387:intron | 45.0% | |
| TTGGAAACGCCTCCTATCAA+AGG | - | chr8.2:12793706-12793725 | None:intergenic | 45.0% | |
| ! | AAGGTGCTTGTGAGAGCTAA+TGG | + | chr8.2:12793445-12793464 | MS.gene041387:intron | 45.0% |
| ! | AGAGCTAATGGTGGTGTTTG+GGG | + | chr8.2:12793457-12793476 | MS.gene041387:intron | 45.0% |
| ! | CCTTTGAATTGGCGGTTTTG+AGG | - | chr8.2:12790171-12790190 | None:intergenic | 45.0% |
| ! | CTGTCACTTGGGTCTATGTT+CGG | - | chr8.2:12792672-12792691 | None:intergenic | 45.0% |
| ! | CTTCTTGACGGTTTTCATGG+TGG | + | chr8.2:12793124-12793143 | MS.gene041387:intron | 45.0% |
| ! | CTTTTGGTGAGGGTTAATGG+TGG | + | chr8.2:12793246-12793265 | MS.gene041387:intron | 45.0% |
| ! | GAGAGCTAATGGTGGTGTTT+GGG | + | chr8.2:12793456-12793475 | MS.gene041387:intron | 45.0% |
| ! | GGTTTTTGTAGTGGTGCTTG+TGG | + | chr8.2:12793319-12793338 | MS.gene041387:intron | 45.0% |
| ! | GTGCTTCTTGACGGTTTTCA+TGG | + | chr8.2:12793121-12793140 | MS.gene041387:intron | 45.0% |
| ! | TCTCTCTTTGTTGTGGATGG+AGG | + | chr8.2:12792980-12792999 | MS.gene041387:intron | 45.0% |
| ! | TGAGAGCTAATGGTGGTGTT+TGG | + | chr8.2:12793455-12793474 | MS.gene041387:intron | 45.0% |
| ! | TGATGGATCAGTCATGATGG+TGG | + | chr8.2:12793027-12793046 | MS.gene041387:intron | 45.0% |
| ! | TGGTTTGTGGTGCTTCTTGA+CGG | + | chr8.2:12793112-12793131 | MS.gene041387:intron | 45.0% |
| ! | TTTTGTAGTGGTGCTTGTGG+TGG | + | chr8.2:12793322-12793341 | MS.gene041387:intron | 45.0% |
| !! | ATCAGTCATGATGGTGGTGA+TGG | + | chr8.2:12793033-12793052 | MS.gene041387:intron | 45.0% |
| !! | ATTTTGGGTCTTTTGTGGCG+GGG | + | chr8.2:12793152-12793171 | MS.gene041387:intron | 45.0% |
| !! | GAATGGAGGCTTTGGAAGAT+TGG | - | chr8.2:12794195-12794214 | None:intergenic | 45.0% |
| !! | GATTTTGGGTCTTTTGTGGC+GGG | + | chr8.2:12793151-12793170 | MS.gene041387:intron | 45.0% |
| !! | GGTGGTGATGGATCATATCT+GGG | + | chr8.2:12793045-12793064 | MS.gene041387:intron | 45.0% |
| !! | TGGTGATGGATCAGTCATGA+TGG | + | chr8.2:12793024-12793043 | MS.gene041387:intron | 45.0% |
| !! | TGGTGGTGATGGATCATATC+TGG | + | chr8.2:12793044-12793063 | MS.gene041387:intron | 45.0% |
| !!! | CGGTAGTTGTTTGGTTTTCG+TGG | + | chr8.2:12792934-12792953 | MS.gene041387:intron | 45.0% |
| !!! | GGTTGGCTTTTGCGATTCTT+TGG | + | chr8.2:12793405-12793424 | MS.gene041387:intron | 45.0% |
| !!! | GTGTTTGGGGGTTTTATTCC+CGG | + | chr8.2:12793470-12793489 | MS.gene041387:intron | 45.0% |
| !!! | GTTAATGGTAGTTTTGGCGG+CGG | + | chr8.2:12793280-12793299 | MS.gene041387:intron | 45.0% |
| !!! | GTTGGTGTTGTCTTTTGGTG+AGG | + | chr8.2:12793235-12793254 | MS.gene041387:intron | 45.0% |
| !!! | TGGTGGTTGGTGTTGTCTTT+TGG | + | chr8.2:12793230-12793249 | MS.gene041387:intron | 45.0% |
| !! | TGAATTTAATTATATAAAAA+AGG | + | chr8.2:12790583-12790602 | MS.gene041387:intron | 5.0% |
| !!! | AAATCTAAAATTTATATTAA+GGG | + | chr8.2:12792546-12792565 | MS.gene041387:intron | 5.0% |
| !!! | ATTTTTTATATTTAGAATAA+GGG | - | chr8.2:12793969-12793988 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTGAAAAA+AGG | - | chr8.2:12793843-12793862 | None:intergenic | 5.0% |
| AGGGAAACCAAAAGCCTGCA+TGG | + | chr8.2:12789701-12789720 | MS.gene041387:intron | 50.0% | |
| ATGATGACTCCGCTGTCACT+TGG | - | chr8.2:12792684-12792703 | None:intergenic | 50.0% | |
| CAACCCGATTAGAGGCTGTA+AGG | - | chr8.2:12792841-12792860 | None:intergenic | 50.0% | |
| CATAGATTGGGAGCCTCCAA+TGG | - | chr8.2:12793778-12793797 | None:intergenic | 50.0% | |
| CCATTGCTCTCTTGGATGCA+AGG | + | chr8.2:12790242-12790261 | MS.gene041387:CDS | 50.0% | |
| CCTTGCATCCAAGAGAGCAA+TGG | - | chr8.2:12790245-12790264 | None:intergenic | 50.0% | |
| CTGAAGCAGGTAGCAAAAGG+AGG | - | chr8.2:12794153-12794172 | None:intergenic | 50.0% | |
| GGAGATAGCCCTTTGATAGG+AGG | + | chr8.2:12793694-12793713 | MS.gene041387:intron | 50.0% | |
| GGAGGCTCCCAATCTATGTA+TGG | + | chr8.2:12793780-12793799 | MS.gene041387:intron | 50.0% | |
| GGCAGTTGTGACGATGTTTG+AGG | + | chr8.2:12793590-12793609 | MS.gene041387:intron | 50.0% | |
| GTGCTTGTGAGAGCTAATGG+TGG | + | chr8.2:12793448-12793467 | MS.gene041387:intron | 50.0% | |
| GTTGATGTGGAACCGAGTAG+TGG | + | chr8.2:12791839-12791858 | MS.gene041387:intron | 50.0% | |
| TGGCTAGTGGTGGTTAGTGA+TGG | + | chr8.2:12793342-12793361 | MS.gene041387:intron | 50.0% | |
| ! | CTTCCAACCATGCAGGCTTT+TGG | - | chr8.2:12789711-12789730 | None:intergenic | 50.0% |
| ! | GAGCTAATGGTGGTGTTTGG+GGG | + | chr8.2:12793458-12793477 | MS.gene041387:intron | 50.0% |
| ! | GGCTTTTGCGATTCTTTGGG+AGG | + | chr8.2:12793409-12793428 | MS.gene041387:intron | 50.0% |
| ! | TCATTTGCGTCGACCACGAT+TGG | + | chr8.2:12792700-12792719 | MS.gene041387:intron | 50.0% |
| ! | TGATGACTCCGCTGTCACTT+GGG | - | chr8.2:12792683-12792702 | None:intergenic | 50.0% |
| !! | AGCAGAATGTAGGTGGTGGA+AGG | + | chr8.2:12793560-12793579 | MS.gene041387:intron | 50.0% |
| !! | GGTCGGGGGTTTTGTCTTAA+TGG | + | chr8.2:12791319-12791338 | MS.gene041387:intron | 50.0% |
| !!! | GTTTTTGGTGGTGTTGAGCG+TGG | + | chr8.2:12793210-12793229 | MS.gene041387:intron | 50.0% |
| GACGAACTTGAAGAAGGCGG+TGG | - | chr8.2:12789861-12789880 | None:intergenic | 55.0% | |
| GAGCAGCAGAATGTAGGTGG+TGG | + | chr8.2:12793556-12793575 | MS.gene041387:intron | 55.0% | |
| GTGTGCGAGCAGCAGAATGT+AGG | + | chr8.2:12793550-12793569 | MS.gene041387:intron | 55.0% | |
| TGCGAGCAGCAGAATGTAGG+TGG | + | chr8.2:12793553-12793572 | MS.gene041387:intron | 55.0% | |
| TGCTCGCACATAGGTGGTGA+TGG | + | chr8.2:12793010-12793029 | MS.gene041387:intron | 55.0% | |
| !! | GGGAGGTGTGTTTTGGGTGA+AGG | + | chr8.2:12793426-12793445 | MS.gene041387:intron | 55.0% |
| !! | TTTGGTGGTGTTGAGCGTGG+TGG | + | chr8.2:12793213-12793232 | MS.gene041387:intron | 55.0% |
| !!! | AATGGTAGTTTTGGCGGCGG+TGG | + | chr8.2:12793283-12793302 | MS.gene041387:intron | 55.0% |
| !!! | GTGCTCGTGCTGGTTTTTGG+TGG | + | chr8.2:12793198-12793217 | MS.gene041387:intron | 55.0% |
| !!! | GTGGTGCTCGTGCTGGTTTT+TGG | + | chr8.2:12793195-12793214 | MS.gene041387:intron | 55.0% |
| GTGCTTGTGGTGGCTAGTGG+TGG | + | chr8.2:12793332-12793351 | MS.gene041387:intron | 60.0% | |
| GTGGTGCTTGTGGTGGCTAG+TGG | + | chr8.2:12793329-12793348 | MS.gene041387:intron | 60.0% | |
| TTTGGAGGTGGTGCTCGTGC+TGG | + | chr8.2:12793188-12793207 | MS.gene041387:intron | 60.0% | |
| ! | AGGCGGTGGTAGCGATGAGA+TGG | - | chr8.2:12789847-12789866 | None:intergenic | 60.0% |
| ! | GTGGTGTTGAGCGTGGTGGT+TGG | + | chr8.2:12793217-12793236 | MS.gene041387:intron | 60.0% |
| !! | TCGTGGGGGGTTTTTGGAGG+TGG | + | chr8.2:12793176-12793195 | MS.gene041387:intron | 60.0% |
| !! | TCTTTTGTGGCGGGGCTCGT+GGG | + | chr8.2:12793160-12793179 | MS.gene041387:intron | 60.0% |
| ! | TTTGGCGGCGGTGGTGGTAG+TGG | + | chr8.2:12793292-12793311 | MS.gene041387:intron | 65.0% |
| !! | CTTTTGTGGCGGGGCTCGTG+GGG | + | chr8.2:12793161-12793180 | MS.gene041387:intron | 65.0% |
| !! | GGCGGTGGTGGTAGTGGTGT+TGG | + | chr8.2:12793298-12793317 | MS.gene041387:intron | 65.0% |
| !! | GGCTCGTGGGGGGTTTTTGG+AGG | + | chr8.2:12793173-12793192 | MS.gene041387:intron | 65.0% |
| !! | GTCTTTTGTGGCGGGGCTCG+TGG | + | chr8.2:12793159-12793178 | MS.gene041387:intron | 65.0% |
| !! | TTTTGTGGCGGGGCTCGTGG+GGG | + | chr8.2:12793162-12793181 | MS.gene041387:intron | 65.0% |
| !!! | GGTAGTTTTGGCGGCGGTGG+TGG | + | chr8.2:12793286-12793305 | MS.gene041387:intron | 65.0% |
| ! | CGGGGCTCGTGGGGGGTTTT+TGG | + | chr8.2:12793170-12793189 | MS.gene041387:intron | 70.0% |
| ! | TTTGTGGCGGGGCTCGTGGG+GGG | + | chr8.2:12793163-12793182 | MS.gene041387:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 12789586 | 12794323 | 12789586 | ID=MS.gene041387 |
| chr8.2 | mRNA | 12789586 | 12794323 | 12789586 | ID=MS.gene041387.t1;Parent=MS.gene041387 |
| chr8.2 | exon | 12789586 | 12789594 | 12789586 | ID=MS.gene041387.t1.exon1;Parent=MS.gene041387.t1 |
| chr8.2 | CDS | 12789586 | 12789594 | 12789586 | ID=cds.MS.gene041387.t1;Parent=MS.gene041387.t1 |
| chr8.2 | exon | 12789703 | 12789948 | 12789703 | ID=MS.gene041387.t1.exon2;Parent=MS.gene041387.t1 |
| chr8.2 | CDS | 12789703 | 12789948 | 12789703 | ID=cds.MS.gene041387.t1;Parent=MS.gene041387.t1 |
| chr8.2 | exon | 12790123 | 12790263 | 12790123 | ID=MS.gene041387.t1.exon3;Parent=MS.gene041387.t1 |
| chr8.2 | CDS | 12790123 | 12790263 | 12790123 | ID=cds.MS.gene041387.t1;Parent=MS.gene041387.t1 |
| chr8.2 | exon | 12790764 | 12791004 | 12790764 | ID=MS.gene041387.t1.exon4;Parent=MS.gene041387.t1 |
| chr8.2 | CDS | 12790764 | 12791004 | 12790764 | ID=cds.MS.gene041387.t1;Parent=MS.gene041387.t1 |
| chr8.2 | exon | 12792336 | 12792382 | 12792336 | ID=MS.gene041387.t1.exon5;Parent=MS.gene041387.t1 |
| chr8.2 | CDS | 12792336 | 12792382 | 12792336 | ID=cds.MS.gene041387.t1;Parent=MS.gene041387.t1 |
| chr8.2 | exon | 12794135 | 12794323 | 12794135 | ID=MS.gene041387.t1.exon6;Parent=MS.gene041387.t1 |
| chr8.2 | CDS | 12794135 | 12794323 | 12794135 | ID=cds.MS.gene041387.t1;Parent=MS.gene041387.t1 |
| Gene Sequence |
| Protein sequence |
