Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041407.t1 | XP_024632961.1 | 84.7 | 793 | 93 | 4 | 1 | 765 | 1 | 793 | 0.00E+00 | 1343.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041407.t1 | Q9SZL8 | 26.7 | 636 | 396 | 11 | 32 | 665 | 70 | 637 | 1.1e-62 | 243.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041407.t1 | D3YBB9 | 76.7 | 774 | 160 | 4 | 1 | 764 | 49 | 812 | 0.0e+00 | 1192.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene041407.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041407.t1 | MTR_0558s0020 | 87.162 | 296 | 37 | 1 | 1 | 295 | 1 | 296 | 0.0 | 546 |
MS.gene041407.t1 | MTR_1g083640 | 82.746 | 284 | 33 | 1 | 1 | 268 | 1 | 284 | 1.72e-171 | 494 |
MS.gene041407.t1 | MTR_8g446020 | 73.559 | 295 | 39 | 1 | 1 | 295 | 1 | 256 | 1.37e-151 | 442 |
MS.gene041407.t1 | MTR_6g090505 | 83.544 | 237 | 39 | 0 | 65 | 301 | 1 | 237 | 1.16e-142 | 424 |
MS.gene041407.t1 | MTR_6g090505 | 67.647 | 102 | 6 | 2 | 396 | 495 | 230 | 306 | 3.35e-34 | 135 |
MS.gene041407.t1 | MTR_6g090505 | 77.551 | 49 | 11 | 0 | 567 | 615 | 314 | 362 | 9.32e-12 | 67.8 |
MS.gene041407.t1 | MTR_2g014100 | 81.633 | 245 | 36 | 1 | 1 | 236 | 1 | 245 | 1.10e-140 | 414 |
MS.gene041407.t1 | MTR_0337s0040 | 71.923 | 260 | 33 | 2 | 1 | 259 | 1 | 221 | 2.55e-123 | 369 |
MS.gene041407.t1 | MTR_3g008240 | 83.744 | 203 | 32 | 1 | 1 | 202 | 1 | 203 | 4.47e-117 | 352 |
MS.gene041407.t1 | MTR_4g040430 | 83.168 | 202 | 30 | 1 | 1 | 202 | 1 | 198 | 1.53e-116 | 350 |
MS.gene041407.t1 | MTR_0337s0060 | 59.177 | 316 | 29 | 4 | 447 | 759 | 21 | 239 | 6.26e-110 | 334 |
MS.gene041407.t1 | MTR_5g071590 | 72.778 | 180 | 36 | 2 | 1 | 167 | 1 | 180 | 2.42e-88 | 276 |
MS.gene041407.t1 | MTR_1g055240 | 88.028 | 142 | 17 | 0 | 91 | 232 | 3 | 144 | 5.39e-87 | 271 |
MS.gene041407.t1 | MTR_0019s0290 | 82.237 | 152 | 27 | 0 | 82 | 233 | 9 | 160 | 2.64e-86 | 270 |
MS.gene041407.t1 | MTR_3g028680 | 81.457 | 151 | 25 | 1 | 618 | 765 | 1 | 151 | 9.86e-81 | 256 |
MS.gene041407.t1 | MTR_2g067090 | 78.378 | 148 | 29 | 1 | 621 | 765 | 99 | 246 | 1.39e-71 | 236 |
MS.gene041407.t1 | MTR_4g133495 | 63.187 | 182 | 41 | 2 | 576 | 754 | 88 | 246 | 8.39e-68 | 225 |
MS.gene041407.t1 | MTR_4g133340 | 63.187 | 182 | 41 | 2 | 576 | 754 | 88 | 246 | 8.39e-68 | 225 |
MS.gene041407.t1 | MTR_1281s0010 | 79.817 | 109 | 22 | 0 | 19 | 127 | 1 | 109 | 2.14e-55 | 186 |
MS.gene041407.t1 | MTR_6g051425 | 32.075 | 318 | 185 | 6 | 40 | 341 | 22 | 324 | 3.72e-39 | 148 |
MS.gene041407.t1 | MTR_4g008820 | 69.000 | 100 | 30 | 1 | 1 | 99 | 125 | 224 | 1.21e-30 | 129 |
MS.gene041407.t1 | MTR_8g046060 | 76.136 | 88 | 12 | 2 | 1 | 79 | 91 | 178 | 2.49e-30 | 119 |
MS.gene041407.t1 | MTR_1g070355 | 26.582 | 316 | 211 | 6 | 49 | 362 | 88 | 384 | 1.19e-18 | 90.9 |
MS.gene041407.t1 | MTR_2g067130 | 62.162 | 74 | 22 | 2 | 695 | 765 | 46 | 116 | 2.24e-18 | 83.2 |
MS.gene041407.t1 | MTR_0402s0040 | 25.405 | 185 | 119 | 4 | 49 | 233 | 40 | 205 | 1.80e-14 | 77.0 |
MS.gene041407.t1 | MTR_0337s0050 | 75.000 | 36 | 9 | 0 | 259 | 294 | 14 | 49 | 1.69e-13 | 66.6 |
MS.gene041407.t1 | MTR_4g035820 | 22.069 | 290 | 193 | 7 | 17 | 299 | 61 | 324 | 5.91e-12 | 69.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041407.t1 | AT4G38180 | 27.457 | 641 | 385 | 13 | 32 | 665 | 70 | 637 | 6.08e-69 | 243 |
MS.gene041407.t1 | AT4G15090 | 24.827 | 721 | 448 | 16 | 50 | 753 | 66 | 709 | 2.69e-60 | 219 |
MS.gene041407.t1 | AT4G15090 | 24.827 | 721 | 448 | 16 | 50 | 753 | 66 | 709 | 2.69e-60 | 219 |
MS.gene041407.t1 | AT4G15090 | 24.827 | 721 | 448 | 16 | 50 | 753 | 66 | 709 | 2.69e-60 | 219 |
MS.gene041407.t1 | AT4G15090 | 24.827 | 721 | 448 | 16 | 50 | 753 | 66 | 709 | 2.69e-60 | 219 |
MS.gene041407.t1 | AT4G15090 | 24.827 | 721 | 448 | 16 | 50 | 753 | 66 | 709 | 2.69e-60 | 219 |
MS.gene041407.t1 | AT2G27110 | 26.298 | 597 | 366 | 15 | 127 | 719 | 108 | 634 | 3.44e-53 | 198 |
MS.gene041407.t1 | AT2G27110 | 26.298 | 597 | 366 | 15 | 127 | 719 | 108 | 634 | 3.44e-53 | 198 |
MS.gene041407.t1 | AT2G27110 | 27.308 | 509 | 313 | 11 | 213 | 719 | 36 | 489 | 6.67e-53 | 196 |
MS.gene041407.t1 | AT1G76320 | 24.963 | 677 | 412 | 19 | 50 | 720 | 12 | 598 | 3.74e-51 | 190 |
MS.gene041407.t1 | AT3G06250 | 24.803 | 633 | 353 | 16 | 34 | 661 | 189 | 703 | 1.16e-50 | 190 |
MS.gene041407.t1 | AT3G06250 | 24.803 | 633 | 353 | 16 | 34 | 661 | 189 | 703 | 1.16e-50 | 190 |
MS.gene041407.t1 | AT3G06250 | 24.803 | 633 | 353 | 16 | 34 | 661 | 189 | 703 | 1.16e-50 | 190 |
MS.gene041407.t1 | AT1G76320 | 24.963 | 677 | 412 | 19 | 50 | 720 | 12 | 598 | 1.55e-50 | 189 |
MS.gene041407.t1 | AT1G76320 | 24.963 | 677 | 412 | 19 | 50 | 720 | 12 | 598 | 1.55e-50 | 189 |
MS.gene041407.t1 | AT1G76320 | 24.963 | 677 | 412 | 19 | 50 | 720 | 12 | 598 | 1.75e-50 | 189 |
MS.gene041407.t1 | AT3G22170 | 22.874 | 682 | 428 | 16 | 34 | 708 | 69 | 659 | 1.15e-47 | 182 |
MS.gene041407.t1 | AT3G22170 | 22.874 | 682 | 428 | 16 | 34 | 708 | 69 | 659 | 1.15e-47 | 182 |
MS.gene041407.t1 | AT5G18960 | 24.420 | 647 | 361 | 18 | 24 | 661 | 200 | 727 | 5.38e-45 | 174 |
MS.gene041407.t1 | AT5G18960 | 24.420 | 647 | 361 | 18 | 24 | 661 | 200 | 727 | 5.38e-45 | 174 |
MS.gene041407.t1 | AT4G38170 | 25.290 | 431 | 264 | 11 | 235 | 662 | 24 | 399 | 9.78e-44 | 166 |
MS.gene041407.t1 | AT1G10240 | 25.040 | 623 | 375 | 19 | 49 | 659 | 62 | 604 | 3.20e-43 | 167 |
MS.gene041407.t1 | AT1G10240 | 25.040 | 623 | 375 | 19 | 49 | 659 | 62 | 604 | 3.20e-43 | 167 |
MS.gene041407.t1 | AT5G28530 | 23.968 | 630 | 382 | 17 | 49 | 660 | 69 | 619 | 2.65e-40 | 158 |
MS.gene041407.t1 | AT5G28530 | 23.968 | 630 | 378 | 18 | 49 | 660 | 69 | 615 | 6.15e-40 | 157 |
MS.gene041407.t1 | AT5G28530 | 23.968 | 630 | 378 | 18 | 49 | 660 | 69 | 615 | 6.15e-40 | 157 |
MS.gene041407.t1 | AT2G32250 | 24.027 | 745 | 429 | 21 | 4 | 743 | 10 | 622 | 7.36e-40 | 158 |
MS.gene041407.t1 | AT2G32250 | 24.177 | 699 | 396 | 19 | 50 | 743 | 12 | 581 | 8.68e-40 | 157 |
MS.gene041407.t1 | AT2G32250 | 24.027 | 745 | 429 | 21 | 4 | 743 | 10 | 622 | 9.74e-40 | 157 |
MS.gene041407.t1 | AT2G32250 | 24.027 | 745 | 429 | 21 | 4 | 743 | 10 | 622 | 9.74e-40 | 157 |
MS.gene041407.t1 | AT2G32250 | 24.027 | 745 | 429 | 21 | 4 | 743 | 10 | 622 | 1.07e-39 | 157 |
MS.gene041407.t1 | AT2G32250 | 24.027 | 745 | 429 | 21 | 4 | 743 | 10 | 622 | 1.07e-39 | 157 |
MS.gene041407.t1 | AT2G32250 | 24.027 | 745 | 429 | 21 | 4 | 743 | 10 | 622 | 1.07e-39 | 157 |
MS.gene041407.t1 | AT2G32250 | 24.177 | 699 | 396 | 19 | 50 | 743 | 12 | 581 | 1.20e-39 | 157 |
MS.gene041407.t1 | AT1G80010 | 24.448 | 634 | 376 | 21 | 50 | 662 | 110 | 661 | 1.01e-35 | 145 |
MS.gene041407.t1 | AT1G52520 | 22.276 | 615 | 402 | 15 | 49 | 662 | 99 | 638 | 1.01e-32 | 135 |
MS.gene041407.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 2.50e-27 | 119 |
MS.gene041407.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 1.36e-12 | 72.0 |
MS.gene041407.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 2.88e-27 | 119 |
MS.gene041407.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 1.32e-12 | 72.0 |
MS.gene041407.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 2.88e-27 | 119 |
MS.gene041407.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 1.32e-12 | 72.0 |
MS.gene041407.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 177 | 440 | 2.93e-27 | 119 |
MS.gene041407.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 509 | 629 | 1.49e-12 | 71.6 |
MS.gene041407.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 106 | 369 | 2.98e-27 | 118 |
MS.gene041407.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 438 | 558 | 1.25e-12 | 72.0 |
MS.gene041407.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 3.65e-27 | 118 |
MS.gene041407.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 1.41e-12 | 72.0 |
MS.gene041407.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 3.65e-27 | 118 |
MS.gene041407.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 1.41e-12 | 72.0 |
MS.gene041407.t1 | AT5G28530 | 21.613 | 620 | 346 | 20 | 49 | 660 | 69 | 556 | 3.52e-21 | 99.0 |
MS.gene041407.t1 | AT5G28530 | 21.613 | 620 | 342 | 21 | 49 | 660 | 69 | 552 | 6.54e-21 | 98.2 |
Find 114 sgRNAs with CRISPR-Local
Find 169 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCATGCTGAGTTGGACTTTA+AGG | 0.133287 | 8.2:+12567365 | MS.gene041407:CDS |
TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 8.2:+12567056 | MS.gene041407:CDS |
AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 8.2:-12568191 | None:intergenic |
CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 8.2:+12567323 | MS.gene041407:CDS |
CAACAAGATTATGCTCTATT+TGG | 0.198611 | 8.2:+12566272 | MS.gene041407:CDS |
TTCATTTCAGCTGCCTTTCT+TGG | 0.201003 | 8.2:+12566775 | MS.gene041407:intron |
TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 8.2:-12566902 | None:intergenic |
CATCGTAAGAGCGTGTTATT+TGG | 0.292488 | 8.2:+12566808 | MS.gene041407:CDS |
TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 8.2:-12568185 | None:intergenic |
GTATGCATTGGTCTTTAGTT+TGG | 0.299789 | 8.2:+12567196 | MS.gene041407:CDS |
AATCAGATTTCGACTACAAT+TGG | 0.318540 | 8.2:+12567097 | MS.gene041407:CDS |
TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 8.2:+12568037 | MS.gene041407:CDS |
GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 8.2:-12566322 | None:intergenic |
GGTTTCGAATGTTGATGTTT+TGG | 0.354913 | 8.2:+12567620 | MS.gene041407:CDS |
ACTAGCCTGGTCTGTGTATA+TGG | 0.360230 | 8.2:-12566920 | None:intergenic |
TATGCATTGGTCTTTAGTTT+GGG | 0.370760 | 8.2:+12567197 | MS.gene041407:CDS |
CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 8.2:+12568029 | MS.gene041407:CDS |
AACAATAAATATCGGCCATT+AGG | 0.388497 | 8.2:+12566329 | MS.gene041407:CDS |
ACCGAACAAACAATAAATAT+CGG | 0.389395 | 8.2:+12566321 | MS.gene041407:CDS |
GTCTTTAGTGCCAACATTCA+TGG | 0.395146 | 8.2:-12567913 | None:intergenic |
TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 8.2:-12565792 | None:intergenic |
AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 8.2:+12568177 | MS.gene041407:CDS |
TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 8.2:-12568167 | None:intergenic |
TTCCTTCAAATACTATTATG+AGG | 0.399583 | 8.2:+12567497 | MS.gene041407:CDS |
GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 8.2:+12568062 | MS.gene041407:CDS |
TAAAGAATCATGGAAGTCTT+TGG | 0.410983 | 8.2:+12565563 | MS.gene041407:CDS |
CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 8.2:+12567745 | MS.gene041407:CDS |
GATTATGATCTTCAAACCTT+GGG | 0.413114 | 8.2:-12567668 | None:intergenic |
ATAACACTGGATTCTCTGTT+AGG | 0.417808 | 8.2:+12565634 | MS.gene041407:CDS |
GGGTTGTCACAGTCGACATT+AGG | 0.419786 | 8.2:+12567703 | MS.gene041407:CDS |
CGATTATGATCTTCAAACCT+TGG | 0.425681 | 8.2:-12567669 | None:intergenic |
CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 8.2:+12565969 | MS.gene041407:CDS |
AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 8.2:+12565851 | MS.gene041407:CDS |
TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 8.2:-12566913 | None:intergenic |
GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 8.2:+12565834 | MS.gene041407:CDS |
CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 8.2:-12567846 | None:intergenic |
CGTTATGCTTGTAACAAAGA+AGG | 0.449439 | 8.2:+12565717 | MS.gene041407:CDS |
GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 8.2:+12565999 | MS.gene041407:CDS |
ATCTGAGAGTGGACAATTGA+CGG | 0.452529 | 8.2:+12565488 | MS.gene041407:CDS |
TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 8.2:+12566987 | MS.gene041407:CDS |
GGCCTACTTCGGACTTTAAG+TGG | 0.458978 | 8.2:+12567151 | MS.gene041407:CDS |
ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 8.2:+12567746 | MS.gene041407:CDS |
ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 8.2:+12565683 | MS.gene041407:CDS |
GAAGTGATGGGTCAAGGAGT+TGG | 0.484292 | 8.2:+12566044 | MS.gene041407:CDS |
CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 8.2:-12567499 | None:intergenic |
TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 8.2:-12565828 | None:intergenic |
TTTAATTATGCATATAACAC+TGG | 0.485542 | 8.2:+12565621 | MS.gene041407:CDS |
TCTAATGACAACTCGTCAAA+AGG | 0.488137 | 8.2:+12566112 | MS.gene041407:CDS |
CTCAAGTAGCACAAATGCTC+TGG | 0.489977 | 8.2:-12565939 | None:intergenic |
CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 8.2:+12565677 | MS.gene041407:CDS |
TATGAGGAGGACACAACAAA+AGG | 0.490908 | 8.2:+12567513 | MS.gene041407:CDS |
ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 8.2:-12566788 | None:intergenic |
CTGTCTATGAACCATCTGTT+GGG | 0.491412 | 8.2:+12568138 | MS.gene041407:CDS |
ATCAGATTTCGACTACAATT+GGG | 0.491708 | 8.2:+12567098 | MS.gene041407:CDS |
CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 8.2:+12566125 | MS.gene041407:CDS |
ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 8.2:+12567337 | MS.gene041407:CDS |
GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 8.2:-12567417 | None:intergenic |
GAGAACATCTTATGAAGTGA+TGG | 0.499875 | 8.2:+12566031 | MS.gene041407:CDS |
TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 8.2:-12566217 | None:intergenic |
AAATGCTCTGGTTTATGTAA+TGG | 0.504865 | 8.2:-12565927 | None:intergenic |
CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 8.2:+12567184 | MS.gene041407:CDS |
ATCATAATCGACTTGATGAA+AGG | 0.507955 | 8.2:+12567682 | MS.gene041407:CDS |
TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 8.2:-12566083 | None:intergenic |
GAGGGATAATCATGCTGAGT+TGG | 0.508852 | 8.2:+12567356 | MS.gene041407:CDS |
ATTGGTCTTTAGTTTGGGTG+AGG | 0.511851 | 8.2:+12567202 | MS.gene041407:CDS |
TGTCTATAAGATATATAAGT+GGG | 0.514682 | 8.2:+12565887 | MS.gene041407:CDS |
GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 8.2:-12567662 | None:intergenic |
TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 8.2:-12567305 | None:intergenic |
TCATAATCGACTTGATGAAA+GGG | 0.526860 | 8.2:+12567683 | MS.gene041407:CDS |
CATAATAGTATTTGAAGGAA+AGG | 0.529686 | 8.2:-12567494 | None:intergenic |
ACTTCAACAACGCACTAGCC+TGG | 0.534735 | 8.2:-12566933 | None:intergenic |
TAACAAAGAAGGTTTCAAGA+AGG | 0.538422 | 8.2:+12565728 | MS.gene041407:CDS |
AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 8.2:-12567300 | None:intergenic |
ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 8.2:+12567514 | MS.gene041407:CDS |
AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 8.2:+12565729 | MS.gene041407:CDS |
CATTTAGTGATAAAGAATCA+TGG | 0.546005 | 8.2:+12565553 | MS.gene041407:CDS |
CTGAAATCCACCATGAATGT+TGG | 0.557140 | 8.2:+12567903 | MS.gene041407:CDS |
AATGAAGCTCTCTCGAAACC+AGG | 0.565261 | 8.2:+12566179 | MS.gene041407:CDS |
TGAAAATTCAGTTATTGATG+CGG | 0.565546 | 8.2:+12565512 | MS.gene041407:CDS |
GCTGTCTATGAACCATCTGT+TGG | 0.568181 | 8.2:+12568137 | MS.gene041407:CDS |
GTGATGGGTCAAGGAGTTGG+AGG | 0.568802 | 8.2:+12566047 | MS.gene041407:CDS |
TACACGTGTTTGCGCAGATG+CGG | 0.571672 | 8.2:+12567989 | MS.gene041407:CDS |
ATGTCTATAAGATATATAAG+TGG | 0.572287 | 8.2:+12565886 | MS.gene041407:CDS |
GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 8.2:-12567418 | None:intergenic |
TTTGGTGCAGTCCCAACAGA+TGG | 0.581566 | 8.2:-12568149 | None:intergenic |
TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 8.2:-12567439 | None:intergenic |
ATATTAACTTCATCTGAGAG+TGG | 0.588105 | 8.2:+12565477 | MS.gene041407:CDS |
TCTTATGAAGTGATGGGTCA+AGG | 0.589029 | 8.2:+12566038 | MS.gene041407:CDS |
TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 8.2:+12568030 | MS.gene041407:CDS |
ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 8.2:+12568025 | MS.gene041407:CDS |
TTGAAGAAAACCTTTCCCCA+AGG | 0.594796 | 8.2:+12567652 | MS.gene041407:CDS |
TGAAGACTTAGAAGGCGTAA+CGG | 0.598405 | 8.2:-12568105 | None:intergenic |
GACAACTCGTCAAAAGGAGA+TGG | 0.599038 | 8.2:+12566118 | MS.gene041407:CDS |
TTGATATCGTTGTGCTTGAG+TGG | 0.601464 | 8.2:-12567937 | None:intergenic |
AGAACATCTTATGAAGTGAT+GGG | 0.601988 | 8.2:+12566032 | MS.gene041407:CDS |
AACTCGTCAAAAGGAGATGG+TGG | 0.603142 | 8.2:+12566121 | MS.gene041407:CDS |
ACGTGTTTGCGCAGATGCGG+AGG | 0.605934 | 8.2:+12567992 | MS.gene041407:CDS |
ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 8.2:+12567415 | MS.gene041407:CDS |
CTTCAAATACTATTATGAGG+AGG | 0.607664 | 8.2:+12567500 | MS.gene041407:CDS |
AGAACTGGACTGTCACATGT+TGG | 0.620791 | 8.2:-12565777 | None:intergenic |
AGCCACTTAAAGTCCGAAGT+AGG | 0.621799 | 8.2:-12567153 | None:intergenic |
GGGTCAAGGAGTTGGAGGCA+CGG | 0.621882 | 8.2:+12566052 | MS.gene041407:CDS |
ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 8.2:-12567667 | None:intergenic |
GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 8.2:+12566988 | MS.gene041407:CDS |
TTTAGTGCCAACATTCATGG+TGG | 0.641441 | 8.2:-12567910 | None:intergenic |
CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 8.2:+12567338 | MS.gene041407:CDS |
GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 8.2:-12567888 | None:intergenic |
TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 8.2:-12567459 | None:intergenic |
GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 8.2:+12568014 | MS.gene041407:CDS |
CATGTCGACATAAGAAACCC+CGG | 0.663279 | 8.2:-12567764 | None:intergenic |
TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 8.2:+12567747 | MS.gene041407:CDS |
ATGTTGATAATGATAATGAG+AGG | 0.683310 | 8.2:+12567598 | MS.gene041407:CDS |
TCAAACCATATACACAGACC+AGG | 0.683597 | 8.2:+12566915 | MS.gene041407:CDS |
TGTTGATAATGATAATGAGA+GGG | 0.689129 | 8.2:+12567599 | MS.gene041407:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGTCTATAAGATATATAAG+TGG | + | chr8.2:12565886-12565905 | MS.gene041407:CDS | 20.0% |
!! | CAATTCACAAAATAAGAAAT+CGG | + | chr8.2:12565677-12565696 | MS.gene041407:CDS | 20.0% |
!! | TGTCTATAAGATATATAAGT+GGG | + | chr8.2:12565887-12565906 | MS.gene041407:CDS | 20.0% |
!! | TTTAATTATGCATATAACAC+TGG | + | chr8.2:12565621-12565640 | MS.gene041407:CDS | 20.0% |
!!! | AATTTAATGTTCTGGTTTAT+GGG | + | chr8.2:12566504-12566523 | MS.gene041407:intron | 20.0% |
!!! | ATGATGAAAAACTGTTTTAA+TGG | + | chr8.2:12567126-12567145 | MS.gene041407:CDS | 20.0% |
!!! | TGAATGTTTATATTGATTGA+AGG | + | chr8.2:12566476-12566495 | MS.gene041407:intron | 20.0% |
! | AAAACACCTTGAAAAACATT+CGG | - | chr8.2:12566964-12566983 | None:intergenic | 25.0% |
! | ACAAAATAAGAAATCGGATA+AGG | + | chr8.2:12565683-12565702 | MS.gene041407:CDS | 25.0% |
! | ACCGAACAAACAATAAATAT+CGG | + | chr8.2:12566321-12566340 | MS.gene041407:CDS | 25.0% |
! | AGTACAAAATACTAACCTAA+TGG | - | chr8.2:12566347-12566366 | None:intergenic | 25.0% |
! | CATAATAGTATTTGAAGGAA+AGG | - | chr8.2:12567497-12567516 | None:intergenic | 25.0% |
! | CATTTAGTGATAAAGAATCA+TGG | + | chr8.2:12565553-12565572 | MS.gene041407:CDS | 25.0% |
! | CTAGTATATGTGTGTTAATT+TGG | + | chr8.2:12566433-12566452 | MS.gene041407:intron | 25.0% |
! | CTTTAGTCATTTCAACATTA+TGG | + | chr8.2:12567323-12567342 | MS.gene041407:CDS | 25.0% |
! | TGAAAATTCAGTTATTGATG+CGG | + | chr8.2:12565512-12565531 | MS.gene041407:CDS | 25.0% |
! | TGAAATTTGAATGAATGTTC+TGG | + | chr8.2:12566394-12566413 | MS.gene041407:intron | 25.0% |
! | TGAATAAATGAAAAGCAAGA+TGG | - | chr8.2:12567462-12567481 | None:intergenic | 25.0% |
! | TTCCTTCAAATACTATTATG+AGG | + | chr8.2:12567497-12567516 | MS.gene041407:CDS | 25.0% |
! | TTTCGATGAGTTAACTAATT+TGG | + | chr8.2:12567056-12567075 | MS.gene041407:CDS | 25.0% |
!! | AGGTTTAGAATTTAATGTTC+TGG | + | chr8.2:12566496-12566515 | MS.gene041407:intron | 25.0% |
!! | TGTTGTATTTTGTTCTGATT+TGG | + | chr8.2:12566752-12566771 | MS.gene041407:intron | 25.0% |
!!! | ATGTTGATAATGATAATGAG+AGG | + | chr8.2:12567598-12567617 | MS.gene041407:CDS | 25.0% |
!!! | CTTATTTTGTGAATTGTTCT+TGG | - | chr8.2:12565673-12565692 | None:intergenic | 25.0% |
!!! | GAATTTAATGTTCTGGTTTA+TGG | + | chr8.2:12566503-12566522 | MS.gene041407:intron | 25.0% |
!!! | GCTTTAATAAATTCTAAAGC+TGG | + | chr8.2:12565999-12566018 | MS.gene041407:CDS | 25.0% |
!!! | TGAAAAACTGTTTTAATGGA+AGG | + | chr8.2:12567130-12567149 | MS.gene041407:CDS | 25.0% |
!!! | TGTTGATAATGATAATGAGA+GGG | + | chr8.2:12567599-12567618 | MS.gene041407:CDS | 25.0% |
AAACACATATGATCTTTCCA+TGG | - | chr8.2:12566567-12566586 | None:intergenic | 30.0% | |
AACAAAGAAGGTTTCAAGAA+GGG | + | chr8.2:12565729-12565748 | MS.gene041407:CDS | 30.0% | |
AACAATAAATATCGGCCATT+AGG | + | chr8.2:12566329-12566348 | MS.gene041407:CDS | 30.0% | |
AAGAAAGACCAAATCCAATT+AGG | + | chr8.2:12568177-12568196 | MS.gene041407:CDS | 30.0% | |
AATCAGATTTCGACTACAAT+TGG | + | chr8.2:12567097-12567116 | MS.gene041407:CDS | 30.0% | |
AGAACATCTTATGAAGTGAT+GGG | + | chr8.2:12566032-12566051 | MS.gene041407:CDS | 30.0% | |
ATATTAACTTCATCTGAGAG+TGG | + | chr8.2:12565477-12565496 | MS.gene041407:CDS | 30.0% | |
ATCAGATTTCGACTACAATT+GGG | + | chr8.2:12567098-12567117 | MS.gene041407:CDS | 30.0% | |
ATGATTGTCAAAACCAAGAA+AGG | - | chr8.2:12566791-12566810 | None:intergenic | 30.0% | |
ATTATGATCTTCAAACCTTG+GGG | - | chr8.2:12567670-12567689 | None:intergenic | 30.0% | |
CAACAAGATTATGCTCTATT+TGG | + | chr8.2:12566272-12566291 | MS.gene041407:CDS | 30.0% | |
CTCCTCATAATAGTATTTGA+AGG | - | chr8.2:12567502-12567521 | None:intergenic | 30.0% | |
CTTCAAATACTATTATGAGG+AGG | + | chr8.2:12567500-12567519 | MS.gene041407:CDS | 30.0% | |
GAGAATGCAAAGAAAAATCT+CGG | + | chr8.2:12567012-12567031 | MS.gene041407:CDS | 30.0% | |
GATTATGATCTTCAAACCTT+GGG | - | chr8.2:12567671-12567690 | None:intergenic | 30.0% | |
GCCGATATTTATTGTTTGTT+CGG | - | chr8.2:12566325-12566344 | None:intergenic | 30.0% | |
TAAAGAAAAACCAGAGGAAA+GGG | + | chr8.2:12565818-12565837 | MS.gene041407:CDS | 30.0% | |
TAAAGAATCATGGAAGTCTT+TGG | + | chr8.2:12565563-12565582 | MS.gene041407:CDS | 30.0% | |
TAAAGAATCGAACAAGTGAA+TGG | - | chr8.2:12567308-12567327 | None:intergenic | 30.0% | |
TAACAAAGAAGGTTTCAAGA+AGG | + | chr8.2:12565728-12565747 | MS.gene041407:CDS | 30.0% | |
TGGATATCATAGTAAAAACC+TGG | - | chr8.2:12566200-12566219 | None:intergenic | 30.0% | |
TGGTGTATACTTGTTTACTA+CGG | - | chr8.2:12567442-12567461 | None:intergenic | 30.0% | |
TTCTTTGACCTAATTGGATT+TGG | - | chr8.2:12568188-12568207 | None:intergenic | 30.0% | |
TTTAAGTCCGAAAATCGAAA+AGG | - | chr8.2:12566086-12566105 | None:intergenic | 30.0% | |
TTTCTATTTACACAGCACAA+TGG | + | chr8.2:12566711-12566730 | MS.gene041407:intron | 30.0% | |
! | AAATGCTCTGGTTTATGTAA+TGG | - | chr8.2:12565930-12565949 | None:intergenic | 30.0% |
! | AGCTGGAATATATTTGAAGT+TGG | + | chr8.2:12565851-12565870 | MS.gene041407:CDS | 30.0% |
! | CAAAGTTTTCACAATTGAGA+AGG | + | chr8.2:12567557-12567576 | MS.gene041407:CDS | 30.0% |
! | GAATCTTCCTTTTCGATTTT+CGG | + | chr8.2:12566076-12566095 | MS.gene041407:CDS | 30.0% |
! | GCATCTGAAATATTTCTCAA+CGG | + | chr8.2:12568014-12568033 | MS.gene041407:CDS | 30.0% |
! | TATGGTTTGAGGTTTCTTAT+TGG | - | chr8.2:12566905-12566924 | None:intergenic | 30.0% |
! | TCAATTCCGAATGTTTTTCA+AGG | + | chr8.2:12566955-12566974 | MS.gene041407:CDS | 30.0% |
! | TGAGGCTTTAACAATTTAAG+CGG | + | chr8.2:12568286-12568305 | MS.gene041407:intron | 30.0% |
! | TTTGGTCTTTCTTTGAACTT+TGG | - | chr8.2:12568170-12568189 | None:intergenic | 30.0% |
!! | ACATGTTTTCAAGATTTTGG+AGG | + | chr8.2:12567782-12567801 | MS.gene041407:CDS | 30.0% |
!! | ATCATAATCGACTTGATGAA+AGG | + | chr8.2:12567682-12567701 | MS.gene041407:CDS | 30.0% |
!! | ATGTTCTGGTTTAGAATTGA+AGG | + | chr8.2:12566408-12566427 | MS.gene041407:intron | 30.0% |
!! | GAGGAGTTTCTTATTTCTAA+AGG | + | chr8.2:12568062-12568081 | MS.gene041407:CDS | 30.0% |
!! | TATGCATTGGTCTTTAGTTT+GGG | + | chr8.2:12567197-12567216 | MS.gene041407:CDS | 30.0% |
!! | TCATAATCGACTTGATGAAA+GGG | + | chr8.2:12567683-12567702 | MS.gene041407:CDS | 30.0% |
!! | TCGACATGTTTTCAAGATTT+TGG | + | chr8.2:12567779-12567798 | MS.gene041407:CDS | 30.0% |
!!! | AAGACATAGCCAGTATTTTT+TGG | + | chr8.2:12566234-12566253 | MS.gene041407:CDS | 30.0% |
!!! | AGACATAGCCAGTATTTTTT+GGG | + | chr8.2:12566235-12566254 | MS.gene041407:CDS | 30.0% |
!!! | CTGCACAATATGTTTTAAAG+CGG | + | chr8.2:12567847-12567866 | MS.gene041407:CDS | 30.0% |
!!! | GTTTTTCAAGGTGTTTTTCA+TGG | + | chr8.2:12566967-12566986 | MS.gene041407:CDS | 30.0% |
ACATTATGGTTCAGAGAATG+AGG | + | chr8.2:12567337-12567356 | MS.gene041407:CDS | 35.0% | |
ATAACACTGGATTCTCTGTT+AGG | + | chr8.2:12565634-12565653 | MS.gene041407:CDS | 35.0% | |
CATAAATTCCAAGGCAAGAT+AGG | - | chr8.2:12566534-12566553 | None:intergenic | 35.0% | |
CATTATGGTTCAGAGAATGA+GGG | + | chr8.2:12567338-12567357 | MS.gene041407:CDS | 35.0% | |
CGAGAAGTAAATGAAGTTCA+AGG | + | chr8.2:12565969-12565988 | MS.gene041407:CDS | 35.0% | |
CGATTATGATCTTCAAACCT+TGG | - | chr8.2:12567672-12567691 | None:intergenic | 35.0% | |
CGTTATGCTTGTAACAAAGA+AGG | + | chr8.2:12565717-12565736 | MS.gene041407:CDS | 35.0% | |
CTAAAGAAAAACCAGAGGAA+AGG | + | chr8.2:12565817-12565836 | MS.gene041407:CDS | 35.0% | |
CTCATTCAAATCGTATGCAT+TGG | + | chr8.2:12567184-12567203 | MS.gene041407:CDS | 35.0% | |
GAAAGCTAAAGAAAAACCAG+AGG | + | chr8.2:12565812-12565831 | MS.gene041407:CDS | 35.0% | |
GAAGCAAAAGAAAGATGATG+AGG | + | chr8.2:12568268-12568287 | MS.gene041407:intron | 35.0% | |
GACAGAAATTCCTTATAGCT+CGG | + | chr8.2:12568243-12568262 | MS.gene041407:intron | 35.0% | |
GAGAACATCTTATGAAGTGA+TGG | + | chr8.2:12566031-12566050 | MS.gene041407:CDS | 35.0% | |
GTCTGCTTAATCCTAAAAAC+AGG | + | chr8.2:12565754-12565773 | MS.gene041407:CDS | 35.0% | |
TCTAATGACAACTCGTCAAA+AGG | + | chr8.2:12566112-12566131 | MS.gene041407:CDS | 35.0% | |
TGTACAGAGCATAAATTCCA+AGG | - | chr8.2:12566543-12566562 | None:intergenic | 35.0% | |
TTCTCATACTCAACAAGAAC+TGG | - | chr8.2:12565795-12565814 | None:intergenic | 35.0% | |
! | GAGGCTTTAACAATTTAAGC+GGG | + | chr8.2:12568287-12568306 | MS.gene041407:intron | 35.0% |
! | GGTTTCGAATGTTGATGTTT+TGG | + | chr8.2:12567620-12567639 | MS.gene041407:CDS | 35.0% |
! | TCTTTCAATGCTTTTCTTCG+TGG | + | chr8.2:12567267-12567286 | MS.gene041407:CDS | 35.0% |
! | TTTTAATGGAAGGCCTACTT+CGG | + | chr8.2:12567140-12567159 | MS.gene041407:CDS | 35.0% |
! | TTTTTCATGGTCTTTGCTCA+TGG | + | chr8.2:12566980-12566999 | MS.gene041407:CDS | 35.0% |
!! | ACTGCTTTTGAAGACTTAGA+AGG | - | chr8.2:12568116-12568135 | None:intergenic | 35.0% |
!! | CGCTTTAAAACATATTGTGC+AGG | - | chr8.2:12567849-12567868 | None:intergenic | 35.0% |
!! | GTATGCATTGGTCTTTAGTT+TGG | + | chr8.2:12567196-12567215 | MS.gene041407:CDS | 35.0% |
!! | TTCAAGATTTTGGAGGTCTT+AGG | + | chr8.2:12567789-12567808 | MS.gene041407:CDS | 35.0% |
!!! | AGACATCAGCTACTTTTGAT+TGG | + | chr8.2:12566851-12566870 | MS.gene041407:CDS | 35.0% |
!!! | CACAATATGTTTTAAAGCGG+TGG | + | chr8.2:12567850-12567869 | MS.gene041407:CDS | 35.0% |
AATCGAACAAGTGAATGGTC+TGG | - | chr8.2:12567303-12567322 | None:intergenic | 40.0% | |
ACCTATGATCTTTGCATAGC+TGG | - | chr8.2:12566661-12566680 | None:intergenic | 40.0% | |
AGTCGCTTCTTTGACCTAAT+TGG | - | chr8.2:12568194-12568213 | None:intergenic | 40.0% | |
ATCTGAGAGTGGACAATTGA+CGG | + | chr8.2:12565488-12565507 | MS.gene041407:CDS | 40.0% | |
ATGAGGAGGACACAACAAAA+GGG | + | chr8.2:12567514-12567533 | MS.gene041407:CDS | 40.0% | |
ATGTCGTATGTTTGAGAACC+GGG | + | chr8.2:12567746-12567765 | MS.gene041407:CDS | 40.0% | |
ATTTATGCTCTGTACAGCCA+TGG | + | chr8.2:12566547-12566566 | MS.gene041407:intron | 40.0% | |
ATTTCTCAACGGTGTTCTTG+AGG | + | chr8.2:12568025-12568044 | MS.gene041407:CDS | 40.0% | |
CATGTCGTATGTTTGAGAAC+CGG | + | chr8.2:12567745-12567764 | MS.gene041407:CDS | 40.0% | |
CTGAAATCCACCATGAATGT+TGG | + | chr8.2:12567903-12567922 | MS.gene041407:CDS | 40.0% | |
CTGTCTATGAACCATCTGTT+GGG | + | chr8.2:12568138-12568157 | MS.gene041407:CDS | 40.0% | |
GATTTCAGCTTATCGACAGA+CGG | - | chr8.2:12567891-12567910 | None:intergenic | 40.0% | |
GTCTTTAGTGCCAACATTCA+TGG | - | chr8.2:12567916-12567935 | None:intergenic | 40.0% | |
TATGAGGAGGACACAACAAA+AGG | + | chr8.2:12567513-12567532 | MS.gene041407:CDS | 40.0% | |
TCAAACCATATACACAGACC+AGG | + | chr8.2:12566915-12566934 | MS.gene041407:CDS | 40.0% | |
TCCAGCTATGCAAAGATCAT+AGG | + | chr8.2:12566657-12566676 | MS.gene041407:intron | 40.0% | |
TCCATCTGCCCAAAAAATAC+TGG | - | chr8.2:12566246-12566265 | None:intergenic | 40.0% | |
TGGTCTGTGTATATGGTTTG+AGG | - | chr8.2:12566916-12566935 | None:intergenic | 40.0% | |
TTCATTTCAGCTGCCTTTCT+TGG | + | chr8.2:12566775-12566794 | MS.gene041407:intron | 40.0% | |
TTGAAGAAAACCTTTCCCCA+AGG | + | chr8.2:12567652-12567671 | MS.gene041407:CDS | 40.0% | |
TTGATATCGTTGTGCTTGAG+TGG | - | chr8.2:12567940-12567959 | None:intergenic | 40.0% | |
TTTAGTGCCAACATTCATGG+TGG | - | chr8.2:12567913-12567932 | None:intergenic | 40.0% | |
TTTGCTTCTTCCGAGCTATA+AGG | - | chr8.2:12568256-12568275 | None:intergenic | 40.0% | |
! | CATCGTAAGAGCGTGTTATT+TGG | + | chr8.2:12566808-12566827 | MS.gene041407:CDS | 40.0% |
! | TCATGCTGAGTTGGACTTTA+AGG | + | chr8.2:12567365-12567384 | MS.gene041407:CDS | 40.0% |
! | TGAAGACTTAGAAGGCGTAA+CGG | - | chr8.2:12568108-12568127 | None:intergenic | 40.0% |
!! | AAGATTTTGGAGGTCTTAGG+TGG | + | chr8.2:12567792-12567811 | MS.gene041407:CDS | 40.0% |
!! | ATTGGTCTTTAGTTTGGGTG+AGG | + | chr8.2:12567202-12567221 | MS.gene041407:CDS | 40.0% |
!! | TCACATGTTGGCCTGTTTTT+AGG | - | chr8.2:12565768-12565787 | None:intergenic | 40.0% |
!! | TCTTATGAAGTGATGGGTCA+AGG | + | chr8.2:12566038-12566057 | MS.gene041407:CDS | 40.0% |
AACTCGTCAAAAGGAGATGG+TGG | + | chr8.2:12566121-12566140 | MS.gene041407:CDS | 45.0% | |
AATGAAGCTCTCTCGAAACC+AGG | + | chr8.2:12566179-12566198 | MS.gene041407:CDS | 45.0% | |
AGAACTGGACTGTCACATGT+TGG | - | chr8.2:12565780-12565799 | None:intergenic | 45.0% | |
AGCCACTTAAAGTCCGAAGT+AGG | - | chr8.2:12567156-12567175 | None:intergenic | 45.0% | |
ATCCCAACAGTCAGCTTATG+CGG | + | chr8.2:12567415-12567434 | MS.gene041407:CDS | 45.0% | |
CATGTCGACATAAGAAACCC+CGG | - | chr8.2:12567767-12567786 | None:intergenic | 45.0% | |
CTCAAGTAGCACAAATGCTC+TGG | - | chr8.2:12565942-12565961 | None:intergenic | 45.0% | |
GAAAAACCAGAGGAAAGGGT+TGG | + | chr8.2:12565822-12565841 | MS.gene041407:CDS | 45.0% | |
GACAACTCGTCAAAAGGAGA+TGG | + | chr8.2:12566118-12566137 | MS.gene041407:CDS | 45.0% | |
GAGGGATAATCATGCTGAGT+TGG | + | chr8.2:12567356-12567375 | MS.gene041407:CDS | 45.0% | |
GATCTTCAAACCTTGGGGAA+AGG | - | chr8.2:12567665-12567684 | None:intergenic | 45.0% | |
GCTGTCTATGAACCATCTGT+TGG | + | chr8.2:12568137-12568156 | MS.gene041407:CDS | 45.0% | |
TGTCGTATGTTTGAGAACCG+GGG | + | chr8.2:12567747-12567766 | MS.gene041407:CDS | 45.0% | |
TGTCTTCTGCAGCATCAACT+TGG | - | chr8.2:12566220-12566239 | None:intergenic | 45.0% | |
TGTTCTTGAGGCAGGGAAAA+AGG | + | chr8.2:12568037-12568056 | MS.gene041407:CDS | 45.0% | |
TTACAACCAACCCTTTCCTC+TGG | - | chr8.2:12565831-12565850 | None:intergenic | 45.0% | |
! | ACTAGCCTGGTCTGTGTATA+TGG | - | chr8.2:12566923-12566942 | None:intergenic | 45.0% |
! | GTGAGGTCACATTTTACAGC+TGG | + | chr8.2:12567219-12567238 | MS.gene041407:CDS | 45.0% |
!! | GAAAGGGTTGGTTGTAAAGC+TGG | + | chr8.2:12565834-12565853 | MS.gene041407:CDS | 45.0% |
!!! | GCCAGTATTTTTTGGGCAGA+TGG | + | chr8.2:12566242-12566261 | MS.gene041407:CDS | 45.0% |
ACTTCAACAACGCACTAGCC+TGG | - | chr8.2:12566936-12566955 | None:intergenic | 50.0% | |
GACCGCATAAGCTGACTGTT+GGG | - | chr8.2:12567420-12567439 | None:intergenic | 50.0% | |
GGCCTACTTCGGACTTTAAG+TGG | + | chr8.2:12567151-12567170 | MS.gene041407:CDS | 50.0% | |
GGGTTGTCACAGTCGACATT+AGG | + | chr8.2:12567703-12567722 | MS.gene041407:CDS | 50.0% | |
GGTCTTTGCTCATGGCACAT+GGG | + | chr8.2:12566988-12567007 | MS.gene041407:CDS | 50.0% | |
TACACGTGTTTGCGCAGATG+CGG | + | chr8.2:12567989-12568008 | MS.gene041407:CDS | 50.0% | |
TCAACGGTGTTCTTGAGGCA+GGG | + | chr8.2:12568030-12568049 | MS.gene041407:CDS | 50.0% | |
TGGGTGATCCTATCTTGCCT+TGG | + | chr8.2:12566523-12566542 | MS.gene041407:intron | 50.0% | |
TGGTCTTTGCTCATGGCACA+TGG | + | chr8.2:12566987-12567006 | MS.gene041407:CDS | 50.0% | |
! | TTTGGTGCAGTCCCAACAGA+TGG | - | chr8.2:12568152-12568171 | None:intergenic | 50.0% |
!! | GAAGTGATGGGTCAAGGAGT+TGG | + | chr8.2:12566044-12566063 | MS.gene041407:CDS | 50.0% |
CTCAACGGTGTTCTTGAGGC+AGG | + | chr8.2:12568029-12568048 | MS.gene041407:CDS | 55.0% | |
GGACCGCATAAGCTGACTGT+TGG | - | chr8.2:12567421-12567440 | None:intergenic | 55.0% | |
TGAGGCAGGGAAAAAGGCAG+AGG | + | chr8.2:12568043-12568062 | MS.gene041407:CDS | 55.0% | |
! | CGTCAAAAGGAGATGGTGGC+TGG | + | chr8.2:12566125-12566144 | MS.gene041407:CDS | 55.0% |
!! | GTGATGGGTCAAGGAGTTGG+AGG | + | chr8.2:12566047-12566066 | MS.gene041407:CDS | 55.0% |
ACGTGTTTGCGCAGATGCGG+AGG | + | chr8.2:12567992-12568011 | MS.gene041407:CDS | 60.0% | |
GGGTCAAGGAGTTGGAGGCA+CGG | + | chr8.2:12566052-12566071 | MS.gene041407:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 12565468 | 12568315 | 12565468 | ID=MS.gene041407 |
chr8.2 | mRNA | 12565468 | 12568315 | 12565468 | ID=MS.gene041407.t1;Parent=MS.gene041407 |
chr8.2 | exon | 12565468 | 12566350 | 12565468 | ID=MS.gene041407.t1.exon1;Parent=MS.gene041407.t1 |
chr8.2 | CDS | 12565468 | 12566350 | 12565468 | ID=cds.MS.gene041407.t1;Parent=MS.gene041407.t1 |
chr8.2 | exon | 12566785 | 12568198 | 12566785 | ID=MS.gene041407.t1.exon2;Parent=MS.gene041407.t1 |
chr8.2 | CDS | 12566785 | 12568198 | 12566785 | ID=cds.MS.gene041407.t1;Parent=MS.gene041407.t1 |
chr8.2 | exon | 12568306 | 12568315 | 12568306 | ID=MS.gene041407.t1.exon3;Parent=MS.gene041407.t1 |
chr8.2 | CDS | 12568306 | 12568315 | 12568306 | ID=cds.MS.gene041407.t1;Parent=MS.gene041407.t1 |
Gene Sequence |
Protein sequence |