Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041415.t1 | KEH32160.1 | 93.4 | 331 | 11 | 2 | 1 | 321 | 1 | 330 | 5.20E-156 | 560.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041415.t1 | P48001 | 78.1 | 265 | 39 | 4 | 71 | 321 | 123 | 382 | 4.1e-109 | 396.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041415.t1 | A0A072V203 | 93.4 | 331 | 11 | 2 | 1 | 321 | 1 | 330 | 3.8e-156 | 560.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene041415.t1 | TF | HB-KNOX |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041415.t1 | MTR_4g116545 | 95.770 | 331 | 3 | 2 | 1 | 321 | 1 | 330 | 0.0 | 650 |
| MS.gene041415.t1 | MTR_4g116545 | 95.770 | 331 | 3 | 2 | 1 | 321 | 1 | 330 | 0.0 | 649 |
| MS.gene041415.t1 | MTR_2g461240 | 71.788 | 358 | 60 | 9 | 1 | 321 | 1 | 354 | 1.47e-173 | 486 |
| MS.gene041415.t1 | MTR_1g012960 | 76.493 | 268 | 49 | 4 | 67 | 321 | 169 | 435 | 1.05e-146 | 420 |
| MS.gene041415.t1 | MTR_3g106400 | 75.000 | 268 | 49 | 4 | 70 | 321 | 105 | 370 | 1.00e-141 | 405 |
| MS.gene041415.t1 | MTR_3g106400 | 75.000 | 268 | 49 | 4 | 70 | 321 | 105 | 370 | 1.06e-141 | 405 |
| MS.gene041415.t1 | MTR_3g106400 | 75.000 | 268 | 49 | 4 | 70 | 321 | 105 | 370 | 5.23e-141 | 405 |
| MS.gene041415.t1 | MTR_5g011070 | 65.799 | 269 | 78 | 3 | 67 | 321 | 23 | 291 | 6.13e-122 | 352 |
| MS.gene041415.t1 | MTR_1g084060 | 33.473 | 239 | 148 | 5 | 69 | 306 | 17 | 245 | 2.95e-27 | 107 |
| MS.gene041415.t1 | MTR_1g084060 | 33.473 | 239 | 148 | 5 | 69 | 306 | 17 | 245 | 6.45e-27 | 107 |
| MS.gene041415.t1 | MTR_2g024390 | 31.933 | 238 | 141 | 6 | 72 | 306 | 118 | 337 | 5.71e-26 | 106 |
| MS.gene041415.t1 | MTR_1g017080 | 32.794 | 247 | 147 | 6 | 62 | 306 | 113 | 342 | 8.41e-25 | 103 |
| MS.gene041415.t1 | MTR_5g033720 | 32.500 | 240 | 139 | 7 | 72 | 306 | 73 | 294 | 1.76e-23 | 98.6 |
| MS.gene041415.t1 | MTR_5g085860 | 29.339 | 242 | 135 | 8 | 74 | 306 | 49 | 263 | 4.60e-19 | 86.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041415.t1 | AT5G11060 | 78.113 | 265 | 39 | 4 | 71 | 321 | 123 | 382 | 4.10e-146 | 417 |
| MS.gene041415.t1 | AT5G25220 | 76.981 | 265 | 42 | 3 | 71 | 321 | 159 | 418 | 3.84e-145 | 416 |
| MS.gene041415.t1 | AT5G25220 | 76.981 | 265 | 42 | 3 | 71 | 321 | 159 | 418 | 4.89e-145 | 416 |
| MS.gene041415.t1 | AT4G32040 | 70.833 | 264 | 61 | 6 | 71 | 321 | 118 | 378 | 5.24e-126 | 365 |
| MS.gene041415.t1 | AT4G32040 | 70.833 | 264 | 61 | 6 | 71 | 321 | 118 | 378 | 5.52e-126 | 365 |
| MS.gene041415.t1 | AT1G62990 | 61.733 | 277 | 89 | 4 | 59 | 321 | 17 | 290 | 1.65e-119 | 346 |
| MS.gene041415.t1 | AT1G23380 | 33.217 | 286 | 141 | 11 | 33 | 306 | 58 | 305 | 2.10e-28 | 112 |
| MS.gene041415.t1 | AT4G08150 | 34.553 | 246 | 130 | 7 | 72 | 306 | 135 | 360 | 9.55e-28 | 112 |
| MS.gene041415.t1 | AT1G70510 | 33.065 | 248 | 133 | 9 | 68 | 306 | 66 | 289 | 1.54e-27 | 109 |
| MS.gene041415.t1 | AT1G23380 | 32.986 | 288 | 141 | 12 | 33 | 306 | 58 | 307 | 1.36e-26 | 107 |
| MS.gene041415.t1 | AT1G70510 | 31.855 | 248 | 140 | 8 | 68 | 306 | 66 | 293 | 3.25e-26 | 106 |
| MS.gene041415.t1 | AT1G62360 | 33.473 | 239 | 138 | 6 | 72 | 306 | 122 | 343 | 1.02e-22 | 97.8 |
Find 79 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGGAGCTTGATCACTTTA+TGG | 0.159839 | 8.2:+12484379 | MS.gene041415:CDS |
| TTCTGTTGGAATTGGAAATA+TGG | 0.205132 | 8.2:+12484352 | MS.gene041415:CDS |
| CTACCTCTTGCGCTTGGTTT+TGG | 0.213600 | 8.2:-12488823 | None:intergenic |
| AAATATTCTTCTGTTGGAAT+TGG | 0.277819 | 8.2:+12484344 | MS.gene041415:CDS |
| GAATACAAAGCAGAGATATT+AGG | 0.306187 | 8.2:+12484203 | MS.gene041415:CDS |
| AATTAAAGCAAATAAATAAC+TGG | 0.339856 | 8.2:+12488745 | MS.gene041415:CDS |
| GGTGGCAATCACATTCTAAA+TGG | 0.351052 | 8.2:+12488565 | MS.gene041415:CDS |
| TTTCGCAATTGTTGTCATTC+CGG | 0.366302 | 8.2:-12484166 | None:intergenic |
| GCTAGATTGGTGCAGGAAAC+AGG | 0.372105 | 8.2:+12488717 | MS.gene041415:CDS |
| GGTCTTTGATGGAACGAGTT+AGG | 0.372149 | 8.2:+12488418 | MS.gene041415:CDS |
| AACGAAGGAAGCAGCCTTGA+TGG | 0.386285 | 8.2:+12488348 | MS.gene041415:CDS |
| TCAACAGAATTTCATGCAAA+TGG | 0.400557 | 8.2:+12484106 | MS.gene041415:CDS |
| AGAGACTGAAAGGTCTTTGA+TGG | 0.405462 | 8.2:+12488407 | MS.gene041415:CDS |
| GGCGTCGATACTCTTGGCTT+TGG | 0.416116 | 8.2:+12488369 | MS.gene041415:CDS |
| TGGAGGCAGTGATGGCTTGT+TGG | 0.423089 | 8.2:+12486907 | MS.gene041415:CDS |
| GCTGGAAAGCTATTTCTTGT+TGG | 0.428428 | 8.2:-12484016 | None:intergenic |
| GGAGGCAGTGATGGCTTGTT+GGG | 0.429166 | 8.2:+12486908 | MS.gene041415:CDS |
| ATTATGAGCAGGTGTATCTT+CGG | 0.435057 | 8.2:+12488257 | MS.gene041415:intron |
| ATTCTACGAAAGAGAAGAGC+TGG | 0.436569 | 8.2:+12488504 | MS.gene041415:CDS |
| CTTGATGGCGTCGATACTCT+TGG | 0.437382 | 8.2:+12488363 | MS.gene041415:CDS |
| CAGTCTCTGCAAAGCTTGAC+AGG | 0.437852 | 8.2:+12486939 | MS.gene041415:CDS |
| CATAAAGTGATCAAGCTCCT+TGG | 0.444189 | 8.2:-12484378 | None:intergenic |
| ATCCTTGGAAGCTGATCAAC+CGG | 0.446297 | 8.2:-12484284 | None:intergenic |
| ATTGCCACCAAGCTTTCAAA+AGG | 0.450033 | 8.2:-12488551 | None:intergenic |
| ATGATATCTTACAGTTGGAT+AGG | 0.451403 | 8.2:-12488589 | None:intergenic |
| ACTGCTGTTGTTGTTGTGCC+AGG | 0.456266 | 8.2:-12484072 | None:intergenic |
| GGAGGAAGATAAGGCTAGAT+TGG | 0.457401 | 8.2:+12488704 | MS.gene041415:intron |
| AGAAGAAGAAGATGAAGAAA+GGG | 0.460074 | 8.2:+12484046 | MS.gene041415:CDS |
| TTGTTGCAACTGTTCTTTGA+AGG | 0.460514 | 8.2:-12486865 | None:intergenic |
| GATTGATGCTCAGCTTCAAC+AGG | 0.462130 | 8.2:+12484304 | MS.gene041415:CDS |
| CAGAAGAAGAAGATGAAGAA+AGG | 0.465111 | 8.2:+12484045 | MS.gene041415:CDS |
| TCAATCAAAGGAAAAGGAAC+TGG | 0.471396 | 8.2:+12488772 | MS.gene041415:CDS |
| AGAAGAGCTGGGAAACTCCC+TGG | 0.471897 | 8.2:+12488516 | MS.gene041415:CDS |
| GTATCTTCGGGTGAAGGAAC+AGG | 0.474653 | 8.2:+12488270 | MS.gene041415:CDS |
| ATAAAGTGATCAAGCTCCTT+GGG | 0.475708 | 8.2:-12484377 | None:intergenic |
| AAAAGGGATGTGGTGTCCCC+AGG | 0.478534 | 8.2:-12488534 | None:intergenic |
| TTATGAGCAGGTGTATCTTC+GGG | 0.502400 | 8.2:+12488258 | MS.gene041415:intron |
| GTCAGACGATGAAGATGAGC+AGG | 0.503765 | 8.2:+12488302 | MS.gene041415:CDS |
| TCAGTCTCTGTGGGGACTAG+AGG | 0.508899 | 8.2:-12488393 | None:intergenic |
| CACCGGTTGATCAGCTTCCA+AGG | 0.508909 | 8.2:+12484282 | MS.gene041415:CDS |
| AAGATGAAGAAAGGGCATCC+TGG | 0.510979 | 8.2:+12484054 | MS.gene041415:CDS |
| GAAGAGCTGGGAAACTCCCT+GGG | 0.514675 | 8.2:+12488517 | MS.gene041415:CDS |
| TGAAGCTGAGCATCAATCCT+TGG | 0.515964 | 8.2:-12484299 | None:intergenic |
| ATGGTACTACCTCTTGCGCT+TGG | 0.518902 | 8.2:-12488829 | None:intergenic |
| GGTTTATCAATCAAAGGAAA+AGG | 0.523630 | 8.2:+12488766 | MS.gene041415:CDS |
| TCATGCCATGGAGGCAGTGA+TGG | 0.523998 | 8.2:+12486899 | MS.gene041415:CDS |
| GCTCCAAAACCAAGCGCAAG+AGG | 0.527063 | 8.2:+12488820 | MS.gene041415:CDS |
| TGATATCTTACAGTTGGATA+GGG | 0.527756 | 8.2:-12488588 | None:intergenic |
| CTTCTTCTTCTGTGAAACGC+TGG | 0.532142 | 8.2:-12484034 | None:intergenic |
| AGATAAGGCTAGATTGGTGC+AGG | 0.536981 | 8.2:+12488710 | MS.gene041415:CDS |
| CGCAATTGTTGTCATTCCGG+TGG | 0.538196 | 8.2:-12484163 | None:intergenic |
| TTTGGAGCTACTAGAGGATG+GGG | 0.544084 | 8.2:-12488805 | None:intergenic |
| AAAGACCTTTCAGTCTCTGT+GGG | 0.544199 | 8.2:-12488402 | None:intergenic |
| AAAGCATGGATCGGAACCAC+CGG | 0.544529 | 8.2:+12484147 | MS.gene041415:CDS |
| GTGTCTCAGAATTGCGACAC+CGG | 0.547847 | 8.2:+12484265 | MS.gene041415:CDS |
| ACAAGCCATCACTGCCTCCA+TGG | 0.554613 | 8.2:-12486904 | None:intergenic |
| GCAGGTGTATCTTCGGGTGA+AGG | 0.559026 | 8.2:+12488264 | MS.gene041415:intron |
| ATAACTGGTTTATCAATCAA+AGG | 0.563797 | 8.2:+12488760 | MS.gene041415:CDS |
| CCAAGCTTTCAAAAGGGATG+TGG | 0.573990 | 8.2:-12488544 | None:intergenic |
| AAAGGGATGTGGTGTCCCCA+GGG | 0.576707 | 8.2:-12488533 | None:intergenic |
| TTCTACGAAAGAGAAGAGCT+GGG | 0.579028 | 8.2:+12488505 | MS.gene041415:CDS |
| ACATGTCCGTGTTCATGCCA+TGG | 0.585181 | 8.2:+12486887 | MS.gene041415:CDS |
| TCATGCAAATGGAACCAGAA+AGG | 0.585338 | 8.2:+12484117 | MS.gene041415:CDS |
| TAGTCCCCACAGAGACTGAA+AGG | 0.587654 | 8.2:+12488397 | MS.gene041415:CDS |
| GCAAATGGAACCAGAAAGGA+GGG | 0.590244 | 8.2:+12484121 | MS.gene041415:CDS |
| GAATGACAACAATTGCGAAA+CGG | 0.591352 | 8.2:+12484169 | MS.gene041415:CDS |
| CAAAGACCTTTCAGTCTCTG+TGG | 0.597386 | 8.2:-12488403 | None:intergenic |
| GATAATAATTGATCATAGAG+TGG | 0.604741 | 8.2:-12484230 | None:intergenic |
| TGCAAATGGAACCAGAAAGG+AGG | 0.604949 | 8.2:+12484120 | MS.gene041415:CDS |
| CAAGAGTATCGACGCCATCA+AGG | 0.607066 | 8.2:-12488362 | None:intergenic |
| TTGCCACCAAGCTTTCAAAA+GGG | 0.608799 | 8.2:-12488550 | None:intergenic |
| AATTGGAAATATGGATCCCA+AGG | 0.614560 | 8.2:+12484361 | MS.gene041415:CDS |
| CTGCCTCCATGGCATGAACA+CGG | 0.617572 | 8.2:-12486893 | None:intergenic |
| AACGCTAGGTTATACAACGA+AGG | 0.654984 | 8.2:+12488333 | MS.gene041415:CDS |
| TTGAAGCATGAACTCAAACA+AGG | 0.656993 | 8.2:+12488447 | MS.gene041415:CDS |
| AGCAGGCAGAGAGTAACGCT+AGG | 0.662764 | 8.2:+12488319 | MS.gene041415:CDS |
| TGTCCGTGTTCATGCCATGG+AGG | 0.690107 | 8.2:+12486890 | MS.gene041415:CDS |
| AAGACCTTTCAGTCTCTGTG+GGG | 0.730543 | 8.2:-12488401 | None:intergenic |
| AAGAGCTGGGAAACTCCCTG+GGG | 0.766388 | 8.2:+12488518 | MS.gene041415:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAATTGTTTC+TGG | + | chr8.2:12486505-12486524 | MS.gene041415:intron | 10.0% |
| !! | AAATAATGTTGTATTTAAAA+AGG | + | chr8.2:12487694-12487713 | MS.gene041415:intron | 10.0% |
| !! | AATTATAAACATTAAATGTA+CGG | - | chr8.2:12488019-12488038 | None:intergenic | 10.0% |
| !! | CATTTAAATTTATAATATGT+AGG | - | chr8.2:12484874-12484893 | None:intergenic | 10.0% |
| !! | CTACATATTATAAATTTAAA+TGG | + | chr8.2:12484872-12484891 | MS.gene041415:intron | 10.0% |
| !! | TAAAAACAAACATAATAAAA+TGG | + | chr8.2:12484742-12484761 | MS.gene041415:intron | 10.0% |
| !! | TATTCATAATAGATTATTAT+AGG | + | chr8.2:12485770-12485789 | MS.gene041415:intron | 10.0% |
| !!! | AAAATTTTTTATCTTGAAAA+TGG | + | chr8.2:12485832-12485851 | MS.gene041415:intron | 10.0% |
| !!! | ATATATATGAATTGTTTTAT+AGG | + | chr8.2:12488683-12488702 | MS.gene041415:intron | 10.0% |
| !!! | TTAGTCATATAAAATTTTAA+TGG | - | chr8.2:12487925-12487944 | None:intergenic | 10.0% |
| !! | AAAAAAAACTCACTAAAAAA+AGG | - | chr8.2:12486022-12486041 | None:intergenic | 15.0% |
| !! | AAAAAGAGAAAAAATAGTAA+AGG | - | chr8.2:12485175-12485194 | None:intergenic | 15.0% |
| !! | AAAAATAATAAACAATCCTT+TGG | - | chr8.2:12487436-12487455 | None:intergenic | 15.0% |
| !! | AACCCTAAATAAATATTATT+TGG | + | chr8.2:12486598-12486617 | MS.gene041415:intron | 15.0% |
| !! | AATTAAAGCAAATAAATAAC+TGG | + | chr8.2:12488745-12488764 | MS.gene041415:CDS | 15.0% |
| !! | CAAACTCAAATAAAAATATT+TGG | - | chr8.2:12486722-12486741 | None:intergenic | 15.0% |
| !! | GACTATTTAACAATTAAATA+AGG | + | chr8.2:12485030-12485049 | MS.gene041415:intron | 15.0% |
| !! | GTCCAAATAATATTTATTTA+GGG | - | chr8.2:12486603-12486622 | None:intergenic | 15.0% |
| !! | TCTTATAAACTACATTATTA+TGG | + | chr8.2:12487886-12487905 | MS.gene041415:intron | 15.0% |
| !! | TGTCCAAATAATATTTATTT+AGG | - | chr8.2:12486604-12486623 | None:intergenic | 15.0% |
| !! | TTACTATATCTCTAAATTTA+TGG | + | chr8.2:12484487-12484506 | MS.gene041415:intron | 15.0% |
| !! | TTTAACAATTAAATAAGGAT+AGG | + | chr8.2:12485035-12485054 | MS.gene041415:intron | 15.0% |
| !!! | ATTTGTTAATGATTCAAAAA+AGG | - | chr8.2:12485919-12485938 | None:intergenic | 15.0% |
| !!! | TTATTATGATTAGTTGTATA+GGG | + | chr8.2:12487054-12487073 | MS.gene041415:intron | 15.0% |
| !!! | TTTCTAAGATATTTTATGAA+AGG | + | chr8.2:12484773-12484792 | MS.gene041415:intron | 15.0% |
| !!! | TTTTTCAAGACATTATTTTA+TGG | + | chr8.2:12484665-12484684 | MS.gene041415:intron | 15.0% |
| !! | AAGAATAATAATGAGGATAA+TGG | + | chr8.2:12485326-12485345 | MS.gene041415:intron | 20.0% |
| !! | AATCTCAAATATTAAAAGAG+TGG | - | chr8.2:12484823-12484842 | None:intergenic | 20.0% |
| !! | ATTCGAATTCAAATAATGAT+CGG | + | chr8.2:12486536-12486555 | MS.gene041415:intron | 20.0% |
| !! | CATAATTTAGTGCAATAAAT+TGG | - | chr8.2:12484846-12484865 | None:intergenic | 20.0% |
| !! | CTAAAATAATCCACATAAAA+TGG | - | chr8.2:12487816-12487835 | None:intergenic | 20.0% |
| !! | CTAACAAGACAATAAATAAT+GGG | + | chr8.2:12484424-12484443 | MS.gene041415:intron | 20.0% |
| !! | TAGTACAAATAGAAGATTAT+GGG | + | chr8.2:12485256-12485275 | MS.gene041415:intron | 20.0% |
| !! | TATAAACTACATTATTATGG+AGG | + | chr8.2:12487889-12487908 | MS.gene041415:intron | 20.0% |
| !! | TATCTTTACAAATACGTAAT+TGG | - | chr8.2:12484719-12484738 | None:intergenic | 20.0% |
| !! | TCACAAAAAGAATAATAATG+AGG | + | chr8.2:12485319-12485338 | MS.gene041415:intron | 20.0% |
| !! | TCTAACAAGACAATAAATAA+TGG | + | chr8.2:12484423-12484442 | MS.gene041415:intron | 20.0% |
| !! | TCTTAAATGTGGATAAATAA+AGG | - | chr8.2:12484990-12485009 | None:intergenic | 20.0% |
| !!! | AACTCTTTTTTTTTCTTCAT+AGG | - | chr8.2:12487670-12487689 | None:intergenic | 20.0% |
| !!! | AATTTGTCTCATTTTGTATT+GGG | + | chr8.2:12487734-12487753 | MS.gene041415:intron | 20.0% |
| !!! | CAACTTTTATTATTTTCTGA+TGG | + | chr8.2:12485369-12485388 | MS.gene041415:intron | 20.0% |
| !!! | CTGTGTAATTTTTTTTTTGA+GGG | + | chr8.2:12485083-12485102 | MS.gene041415:intron | 20.0% |
| !!! | GTTATTATGATTAGTTGTAT+AGG | + | chr8.2:12487053-12487072 | MS.gene041415:intron | 20.0% |
| !!! | TAAATGGATAAAAGAGTATT+TGG | + | chr8.2:12484888-12484907 | MS.gene041415:intron | 20.0% |
| !!! | TATATGAATTGTTTTATAGG+AGG | + | chr8.2:12488686-12488705 | MS.gene041415:intron | 20.0% |
| !!! | TCTGTGTAATTTTTTTTTTG+AGG | + | chr8.2:12485082-12485101 | MS.gene041415:intron | 20.0% |
| !!! | TGAAAACTTTTTACAAAGAA+AGG | - | chr8.2:12487853-12487872 | None:intergenic | 20.0% |
| !!! | TTTTATGTGGATTATTTTAG+AGG | + | chr8.2:12487816-12487835 | MS.gene041415:intron | 20.0% |
| ! | AAATATTCTTCTGTTGGAAT+TGG | + | chr8.2:12484344-12484363 | MS.gene041415:CDS | 25.0% |
| ! | AACGATAAGAATCAAAGATA+CGG | - | chr8.2:12486306-12486325 | None:intergenic | 25.0% |
| ! | AAGACACTATGAATTAAACT+AGG | - | chr8.2:12484610-12484629 | None:intergenic | 25.0% |
| ! | AATAATGAGAATGTACATCT+TGG | + | chr8.2:12485736-12485755 | MS.gene041415:intron | 25.0% |
| ! | AATAGACTTAGATGCATATT+GGG | + | chr8.2:12486120-12486139 | MS.gene041415:intron | 25.0% |
| ! | ACAAGCTTATCATATAATCT+AGG | - | chr8.2:12485950-12485969 | None:intergenic | 25.0% |
| ! | ACTTAAATCACACTAAAAAG+AGG | - | chr8.2:12486422-12486441 | None:intergenic | 25.0% |
| ! | ATATGATTACATTCATCAGA+AGG | + | chr8.2:12487642-12487661 | MS.gene041415:intron | 25.0% |
| ! | ATCCACATAAAATGGAAATA+TGG | - | chr8.2:12487808-12487827 | None:intergenic | 25.0% |
| ! | ATGCTTTGTACCATTATTAA+AGG | - | chr8.2:12485508-12485527 | None:intergenic | 25.0% |
| ! | ATTATTTAAGCATGGCTAAT+TGG | + | chr8.2:12486783-12486802 | MS.gene041415:intron | 25.0% |
| ! | CAAGATAATAACCCTTAAAT+TGG | - | chr8.2:12485469-12485488 | None:intergenic | 25.0% |
| ! | CAAGCTTATCATATAATCTA+GGG | - | chr8.2:12485949-12485968 | None:intergenic | 25.0% |
| ! | CATGCTAGTTATATAATAGA+AGG | + | chr8.2:12487499-12487518 | MS.gene041415:intron | 25.0% |
| ! | CTAGTACAAATAGAAGATTA+TGG | + | chr8.2:12485255-12485274 | MS.gene041415:intron | 25.0% |
| ! | CTCAATAAACACATATATTG+AGG | + | chr8.2:12486759-12486778 | MS.gene041415:intron | 25.0% |
| ! | CTCAATATATGTGTTTATTG+AGG | - | chr8.2:12486761-12486780 | None:intergenic | 25.0% |
| ! | CTTCAAAAATATTCTTCTGT+TGG | + | chr8.2:12484338-12484357 | MS.gene041415:CDS | 25.0% |
| ! | GATAATAATTGATCATAGAG+TGG | - | chr8.2:12484233-12484252 | None:intergenic | 25.0% |
| ! | GATAATAGTTAACTTTGCTT+TGG | + | chr8.2:12486352-12486371 | MS.gene041415:intron | 25.0% |
| ! | GATTATATGATAAGCTTGTA+AGG | + | chr8.2:12485951-12485970 | MS.gene041415:intron | 25.0% |
| ! | TACTATACTCCCTTTAATAA+TGG | + | chr8.2:12485495-12485514 | MS.gene041415:intron | 25.0% |
| ! | TGCTTTGTACCATTATTAAA+GGG | - | chr8.2:12485507-12485526 | None:intergenic | 25.0% |
| ! | TGGGCAAAAGTTATTAAAAT+TGG | + | chr8.2:12484443-12484462 | MS.gene041415:intron | 25.0% |
| ! | TTATTTAAGCATGGCTAATT+GGG | + | chr8.2:12486784-12486803 | MS.gene041415:intron | 25.0% |
| ! | TTATTTGCATATCTCTATGT+TGG | + | chr8.2:12488621-12488640 | MS.gene041415:intron | 25.0% |
| ! | TTTATCCAAGAATCAAATTC+TGG | + | chr8.2:12487382-12487401 | MS.gene041415:intron | 25.0% |
| !! | AATAATGGTACAAAGCATTT+AGG | + | chr8.2:12485510-12485529 | MS.gene041415:intron | 25.0% |
| !! | ATAACTGGTTTATCAATCAA+AGG | + | chr8.2:12488760-12488779 | MS.gene041415:CDS | 25.0% |
| !! | ATGATTTTCAACATTGTTTC+TGG | + | chr8.2:12486473-12486492 | MS.gene041415:intron | 25.0% |
| !! | CAATTTGTCTCATTTTGTAT+TGG | + | chr8.2:12487733-12487752 | MS.gene041415:intron | 25.0% |
| !! | CATTTTCACTGTTTAAAAAG+AGG | + | chr8.2:12487278-12487297 | MS.gene041415:intron | 25.0% |
| !! | TATTGATGATATCTTACAGT+TGG | - | chr8.2:12488597-12488616 | None:intergenic | 25.0% |
| !! | TGCATATTGGGTTTTTAAAT+CGG | + | chr8.2:12486132-12486151 | MS.gene041415:intron | 25.0% |
| !! | TTATTGTCTTGTTAGAAAAC+AGG | - | chr8.2:12484419-12484438 | None:intergenic | 25.0% |
| !! | TTGAAAGCTTGTAATTTTGT+AGG | - | chr8.2:12487778-12487797 | None:intergenic | 25.0% |
| !!! | CTTGAAAACTCTGATTTTTT+AGG | + | chr8.2:12487946-12487965 | MS.gene041415:intron | 25.0% |
| !!! | TAAAAGAGTATTTGGTTTCA+TGG | + | chr8.2:12484896-12484915 | MS.gene041415:intron | 25.0% |
| !!! | TTACTACTTTCTAGTTTCTA+TGG | - | chr8.2:12488109-12488128 | None:intergenic | 25.0% |
| !!! | TTTTTTTGTCAAGTACTTGT+TGG | - | chr8.2:12485805-12485824 | None:intergenic | 25.0% |
| AAAAACAGTGTCATCAAGTT+TGG | - | chr8.2:12485667-12485686 | None:intergenic | 30.0% | |
| ACATTTAGTCACATCAATTG+TGG | + | chr8.2:12486657-12486676 | MS.gene041415:intron | 30.0% | |
| AGAAGAAGAAGATGAAGAAA+GGG | + | chr8.2:12484046-12484065 | MS.gene041415:CDS | 30.0% | |
| AGATTATGGGATTTGTATTG+TGG | + | chr8.2:12485269-12485288 | MS.gene041415:intron | 30.0% | |
| ATCGTTCTTGTATTGAACAT+TGG | + | chr8.2:12486320-12486339 | MS.gene041415:intron | 30.0% | |
| ATCTTTACATTCTAACTTCG+AGG | + | chr8.2:12486207-12486226 | MS.gene041415:intron | 30.0% | |
| ATGATATCTTACAGTTGGAT+AGG | - | chr8.2:12488592-12488611 | None:intergenic | 30.0% | |
| GAAAAACTGAAAGAAAGCTT+GGG | - | chr8.2:12484651-12484670 | None:intergenic | 30.0% | |
| GAATACAAAGCAGAGATATT+AGG | + | chr8.2:12484203-12484222 | MS.gene041415:CDS | 30.0% | |
| GAATAGACTTAGATGCATAT+TGG | + | chr8.2:12486119-12486138 | MS.gene041415:intron | 30.0% | |
| GGTTTATCAATCAAAGGAAA+AGG | + | chr8.2:12488766-12488785 | MS.gene041415:CDS | 30.0% | |
| GTAAACCAGAATTTGATTCT+TGG | - | chr8.2:12487390-12487409 | None:intergenic | 30.0% | |
| GTTTGAACTATAGTAAGAAG+TGG | - | chr8.2:12484576-12484595 | None:intergenic | 30.0% | |
| TACAGCATTACTATACAATG+AGG | - | chr8.2:12488154-12488173 | None:intergenic | 30.0% | |
| TCAACAGAATTTCATGCAAA+TGG | + | chr8.2:12484106-12484125 | MS.gene041415:CDS | 30.0% | |
| TCCACAAAATTAGGGAAATA+AGG | - | chr8.2:12485214-12485233 | None:intergenic | 30.0% | |
| TGAAAAACTGAAAGAAAGCT+TGG | - | chr8.2:12484652-12484671 | None:intergenic | 30.0% | |
| TGAAATCCAACTAGAAACAA+TGG | + | chr8.2:12487241-12487260 | MS.gene041415:intron | 30.0% | |
| TGATATCTTACAGTTGGATA+GGG | - | chr8.2:12488591-12488610 | None:intergenic | 30.0% | |
| TGTCCAAACAAAAATTCTTG+TGG | + | chr8.2:12486077-12486096 | MS.gene041415:intron | 30.0% | |
| TTCTGTTGGAATTGGAAATA+TGG | + | chr8.2:12484352-12484371 | MS.gene041415:CDS | 30.0% | |
| TTGGTTGCATGGAAAAAATT+TGG | - | chr8.2:12487417-12487436 | None:intergenic | 30.0% | |
| ! | AAGCCACAAGAATTTTTGTT+TGG | - | chr8.2:12486083-12486102 | None:intergenic | 30.0% |
| ! | ATTGAGGCATTATTTAAGCA+TGG | + | chr8.2:12486775-12486794 | MS.gene041415:intron | 30.0% |
| ! | GATAATGGTAGAAAAATCAG+TGG | + | chr8.2:12485341-12485360 | MS.gene041415:intron | 30.0% |
| ! | GCATATTGGGTTTTTAAATC+GGG | + | chr8.2:12486133-12486152 | MS.gene041415:intron | 30.0% |
| ! | GGATATAGTCTTAAACAATG+TGG | + | chr8.2:12487553-12487572 | MS.gene041415:intron | 30.0% |
| ! | GTCCATATTTCCATTTTATG+TGG | + | chr8.2:12487803-12487822 | MS.gene041415:intron | 30.0% |
| ! | GTCTAAGATCAATGAAACTA+TGG | + | chr8.2:12488228-12488247 | MS.gene041415:intron | 30.0% |
| ! | TGTTTTATAGGAGGAAGATA+AGG | + | chr8.2:12488695-12488714 | MS.gene041415:intron | 30.0% |
| !! | ACCTTATTTCCCTAATTTTG+TGG | + | chr8.2:12485210-12485229 | MS.gene041415:intron | 30.0% |
| !! | TTGTTTCCATTGTTTCTAGT+TGG | - | chr8.2:12487250-12487269 | None:intergenic | 30.0% |
| !!! | AATTTTTTCCATGCAACCAA+AGG | + | chr8.2:12487417-12487436 | MS.gene041415:intron | 30.0% |
| !!! | TTTTTTGCTGAAACCTTCAT+GGG | + | chr8.2:12485605-12485624 | MS.gene041415:intron | 30.0% |
| AAACTCTTCAAGAACCATCA+TGG | + | chr8.2:12487207-12487226 | MS.gene041415:intron | 35.0% | |
| AATCACACTAAAAAGAGGAG+TGG | - | chr8.2:12486417-12486436 | None:intergenic | 35.0% | |
| AATTGGAAATATGGATCCCA+AGG | + | chr8.2:12484361-12484380 | MS.gene041415:CDS | 35.0% | |
| ACCACAGAAATGTACAATGA+TGG | - | chr8.2:12485704-12485723 | None:intergenic | 35.0% | |
| ACCTTAAGCTCCACAAAATT+AGG | - | chr8.2:12485223-12485242 | None:intergenic | 35.0% | |
| AGACTCACACATCTTAAATG+TGG | - | chr8.2:12485001-12485020 | None:intergenic | 35.0% | |
| AGTGTCTTAATTTACCTCAC+TGG | + | chr8.2:12484622-12484641 | MS.gene041415:intron | 35.0% | |
| ATAAAGTGATCAAGCTCCTT+GGG | - | chr8.2:12484380-12484399 | None:intergenic | 35.0% | |
| ATACAATGAGGCAAAATCTG+AGG | - | chr8.2:12488142-12488161 | None:intergenic | 35.0% | |
| ATCACACTAAAAAGAGGAGT+GGG | - | chr8.2:12486416-12486435 | None:intergenic | 35.0% | |
| ATTATGAGCAGGTGTATCTT+CGG | + | chr8.2:12488257-12488276 | MS.gene041415:intron | 35.0% | |
| CACAGAAATGTACAATGATG+GGG | - | chr8.2:12485702-12485721 | None:intergenic | 35.0% | |
| CAGAAGAAGAAGATGAAGAA+AGG | + | chr8.2:12484045-12484064 | MS.gene041415:CDS | 35.0% | |
| CCACAGAAATGTACAATGAT+GGG | - | chr8.2:12485703-12485722 | None:intergenic | 35.0% | |
| CCTTAAGCTCCACAAAATTA+GGG | - | chr8.2:12485222-12485241 | None:intergenic | 35.0% | |
| CGAATTCAAATAATGATCGG+AGG | + | chr8.2:12486539-12486558 | MS.gene041415:intron | 35.0% | |
| GAATGACAACAATTGCGAAA+CGG | + | chr8.2:12484169-12484188 | MS.gene041415:CDS | 35.0% | |
| GTAAAGACTGCATTTGTCAA+GGG | - | chr8.2:12487031-12487050 | None:intergenic | 35.0% | |
| TAAACAATCCTTTGGTTGCA+TGG | - | chr8.2:12487428-12487447 | None:intergenic | 35.0% | |
| TAAAGACTGCATTTGTCAAG+GGG | - | chr8.2:12487030-12487049 | None:intergenic | 35.0% | |
| TAATCTTGTCCCACTTGTTT+AGG | + | chr8.2:12485561-12485580 | MS.gene041415:intron | 35.0% | |
| TACAATGAGGCAAAATCTGA+GGG | - | chr8.2:12488141-12488160 | None:intergenic | 35.0% | |
| TAGTCACATCAATTGTGGTT+TGG | + | chr8.2:12486662-12486681 | MS.gene041415:intron | 35.0% | |
| TCAATCAAAGGAAAAGGAAC+TGG | + | chr8.2:12488772-12488791 | MS.gene041415:CDS | 35.0% | |
| TCAGTGAATCAGATTTGTCT+TGG | + | chr8.2:12485430-12485449 | MS.gene041415:intron | 35.0% | |
| TGAACTCAAACAAGGTTACA+AGG | + | chr8.2:12488455-12488474 | MS.gene041415:intron | 35.0% | |
| TTGAAGCATGAACTCAAACA+AGG | + | chr8.2:12488447-12488466 | MS.gene041415:CDS | 35.0% | |
| TTGTTGCAACTGTTCTTTGA+AGG | - | chr8.2:12486868-12486887 | None:intergenic | 35.0% | |
| TTTATGCTTCCACTAGAAAC+TGG | - | chr8.2:12487342-12487361 | None:intergenic | 35.0% | |
| TTTATTGAGGCACACTTAGT+TGG | - | chr8.2:12486748-12486767 | None:intergenic | 35.0% | |
| TTTCGCAATTGTTGTCATTC+CGG | - | chr8.2:12484169-12484188 | None:intergenic | 35.0% | |
| ! | TCAAATACTCCAGTTTCTAG+TGG | + | chr8.2:12487330-12487349 | MS.gene041415:intron | 35.0% |
| ! | TGATTAGTTGTATAGGGTGA+TGG | + | chr8.2:12487060-12487079 | MS.gene041415:intron | 35.0% |
| ! | TGTGGCTAGTTCCAATTTAA+GGG | + | chr8.2:12485455-12485474 | MS.gene041415:intron | 35.0% |
| ! | TTTTTGCTGAAACCTTCATG+GGG | + | chr8.2:12485606-12485625 | MS.gene041415:intron | 35.0% |
| !! | CTTTAAAACGTATGAGGTCT+AGG | + | chr8.2:12487526-12487545 | MS.gene041415:intron | 35.0% |
| !! | TGTACATCTTGGTATTGATG+TGG | + | chr8.2:12485747-12485766 | MS.gene041415:intron | 35.0% |
| !!! | CTTTTTTGCTGAAACCTTCA+TGG | + | chr8.2:12485604-12485623 | MS.gene041415:intron | 35.0% |
| AAAGACCTTTCAGTCTCTGT+GGG | - | chr8.2:12488405-12488424 | None:intergenic | 40.0% | |
| AACGCTAGGTTATACAACGA+AGG | + | chr8.2:12488333-12488352 | MS.gene041415:CDS | 40.0% | |
| ACAATGAGGCAAAATCTGAG+GGG | - | chr8.2:12488140-12488159 | None:intergenic | 40.0% | |
| AGAAAGGAGGGAAAAAAGCA+TGG | + | chr8.2:12484133-12484152 | MS.gene041415:CDS | 40.0% | |
| AGAACACACACCTAAACAAG+TGG | - | chr8.2:12485574-12485593 | None:intergenic | 40.0% | |
| AGAGACTGAAAGGTCTTTGA+TGG | + | chr8.2:12488407-12488426 | MS.gene041415:CDS | 40.0% | |
| ATTCTACGAAAGAGAAGAGC+TGG | + | chr8.2:12488504-12488523 | MS.gene041415:CDS | 40.0% | |
| ATTGCCACCAAGCTTTCAAA+AGG | - | chr8.2:12488554-12488573 | None:intergenic | 40.0% | |
| CAAGGAGCTTGATCACTTTA+TGG | + | chr8.2:12484379-12484398 | MS.gene041415:CDS | 40.0% | |
| CATAAAGTGATCAAGCTCCT+TGG | - | chr8.2:12484381-12484400 | None:intergenic | 40.0% | |
| CCCATCATTGTACATTTCTG+TGG | + | chr8.2:12485700-12485719 | MS.gene041415:intron | 40.0% | |
| CGTAAAGACTGCATTTGTCA+AGG | - | chr8.2:12487032-12487051 | None:intergenic | 40.0% | |
| GAACACACACCTAAACAAGT+GGG | - | chr8.2:12485573-12485592 | None:intergenic | 40.0% | |
| GGTGGCAATCACATTCTAAA+TGG | + | chr8.2:12488565-12488584 | MS.gene041415:CDS | 40.0% | |
| TATGGTGCATCATTATGAGC+AGG | + | chr8.2:12488246-12488265 | MS.gene041415:intron | 40.0% | |
| TCAAAATCTGATCCCCATGA+AGG | - | chr8.2:12485621-12485640 | None:intergenic | 40.0% | |
| TCACATTCTCTTCACCATGA+TGG | - | chr8.2:12487224-12487243 | None:intergenic | 40.0% | |
| TCATGCAAATGGAACCAGAA+AGG | + | chr8.2:12484117-12484136 | MS.gene041415:CDS | 40.0% | |
| TGCGAAGACATCAACATGTA+GGG | + | chr8.2:12484944-12484963 | MS.gene041415:intron | 40.0% | |
| TGCTCATACTTTAGCTAGGA+TGG | + | chr8.2:12486261-12486280 | MS.gene041415:intron | 40.0% | |
| TGGTTGCTCATACTTTAGCT+AGG | + | chr8.2:12486257-12486276 | MS.gene041415:intron | 40.0% | |
| TGTTAGAAGACAAGCGAACA+TGG | + | chr8.2:12486237-12486256 | MS.gene041415:intron | 40.0% | |
| TTATGAGCAGGTGTATCTTC+GGG | + | chr8.2:12488258-12488277 | MS.gene041415:intron | 40.0% | |
| TTCTACGAAAGAGAAGAGCT+GGG | + | chr8.2:12488505-12488524 | MS.gene041415:CDS | 40.0% | |
| TTGCCACCAAGCTTTCAAAA+GGG | - | chr8.2:12488553-12488572 | None:intergenic | 40.0% | |
| ! | ATCAGATTTGTCTTGGTGTG+TGG | + | chr8.2:12485437-12485456 | MS.gene041415:intron | 40.0% |
| ! | CCCTAATTTTGTGGAGCTTA+AGG | + | chr8.2:12485219-12485238 | MS.gene041415:intron | 40.0% |
| ! | GTGTGGCTAGTTCCAATTTA+AGG | + | chr8.2:12485454-12485473 | MS.gene041415:intron | 40.0% |
| !! | GCTGGAAAGCTATTTCTTGT+TGG | - | chr8.2:12484019-12484038 | None:intergenic | 40.0% |
| !! | GGAGCTCTTTAAAACGTATG+AGG | + | chr8.2:12487520-12487539 | MS.gene041415:intron | 40.0% |
| !!! | ATGCTTTTTTCCCTCCTTTC+TGG | - | chr8.2:12484134-12484153 | None:intergenic | 40.0% |
| !!! | TTTTGGAGCTACTAGAGGAT+GGG | - | chr8.2:12488809-12488828 | None:intergenic | 40.0% |
| AACGTATGAGGTCTAGGTCT+AGG | + | chr8.2:12487532-12487551 | MS.gene041415:intron | 45.0% | |
| AAGACCTTTCAGTCTCTGTG+GGG | - | chr8.2:12488404-12488423 | None:intergenic | 45.0% | |
| AGATAAGGCTAGATTGGTGC+AGG | + | chr8.2:12488710-12488729 | MS.gene041415:CDS | 45.0% | |
| AGCTAGGATGGTCTGTTCTT+GGG | + | chr8.2:12486273-12486292 | MS.gene041415:intron | 45.0% | |
| ATCCTTGGAAGCTGATCAAC+CGG | - | chr8.2:12484287-12484306 | None:intergenic | 45.0% | |
| CAAAGACCTTTCAGTCTCTG+TGG | - | chr8.2:12488406-12488425 | None:intergenic | 45.0% | |
| CAATGAGGCAAAATCTGAGG+GGG | - | chr8.2:12488139-12488158 | None:intergenic | 45.0% | |
| CCAAGCTTTCAAAAGGGATG+TGG | - | chr8.2:12488547-12488566 | None:intergenic | 45.0% | |
| CTGCGAAGACATCAACATGT+AGG | + | chr8.2:12484943-12484962 | MS.gene041415:intron | 45.0% | |
| CTTCTTCTTCTGTGAAACGC+TGG | - | chr8.2:12484037-12484056 | None:intergenic | 45.0% | |
| GATTGATGCTCAGCTTCAAC+AGG | + | chr8.2:12484304-12484323 | MS.gene041415:CDS | 45.0% | |
| GCAAATGGAACCAGAAAGGA+GGG | + | chr8.2:12484121-12484140 | MS.gene041415:CDS | 45.0% | |
| GCGAAGACATCAACATGTAG+GGG | + | chr8.2:12484945-12484964 | MS.gene041415:intron | 45.0% | |
| GGAGGAAGATAAGGCTAGAT+TGG | + | chr8.2:12488704-12488723 | MS.gene041415:intron | 45.0% | |
| GGAGGCAGATAAACACATGA+GGG | + | chr8.2:12486557-12486576 | MS.gene041415:intron | 45.0% | |
| GGTCTTTGATGGAACGAGTT+AGG | + | chr8.2:12488418-12488437 | MS.gene041415:CDS | 45.0% | |
| TAGCTAGGATGGTCTGTTCT+TGG | + | chr8.2:12486272-12486291 | MS.gene041415:intron | 45.0% | |
| TGAAGCTGAGCATCAATCCT+TGG | - | chr8.2:12484302-12484321 | None:intergenic | 45.0% | |
| TGCAAATGGAACCAGAAAGG+AGG | + | chr8.2:12484120-12484139 | MS.gene041415:CDS | 45.0% | |
| ! | GGAGGGAAAAAAGCATGGAT+CGG | + | chr8.2:12484138-12484157 | MS.gene041415:CDS | 45.0% |
| ! | TTTGGAGCTACTAGAGGATG+GGG | - | chr8.2:12488808-12488827 | None:intergenic | 45.0% |
| !! | AAGATGAAGAAAGGGCATCC+TGG | + | chr8.2:12484054-12484073 | MS.gene041415:CDS | 45.0% |
| !! | CATCCCTTTTGAAAGCTTGG+TGG | + | chr8.2:12488547-12488566 | MS.gene041415:CDS | 45.0% |
| !! | CCACATCCCTTTTGAAAGCT+TGG | + | chr8.2:12488544-12488563 | MS.gene041415:CDS | 45.0% |
| !! | GTTGTATAGGGTGATGGAAG+TGG | + | chr8.2:12487066-12487085 | MS.gene041415:intron | 45.0% |
| !!! | CTTGGTTTTGGAGCTACTAG+AGG | - | chr8.2:12488814-12488833 | None:intergenic | 45.0% |
| !!! | GTTTTGGAGCTACTAGAGGA+TGG | - | chr8.2:12488810-12488829 | None:intergenic | 45.0% |
| AAAGCATGGATCGGAACCAC+CGG | + | chr8.2:12484147-12484166 | MS.gene041415:CDS | 50.0% | |
| AACGAAGGAAGCAGCCTTGA+TGG | + | chr8.2:12488348-12488367 | MS.gene041415:CDS | 50.0% | |
| ACATGTCCGTGTTCATGCCA+TGG | + | chr8.2:12486887-12486906 | MS.gene041415:CDS | 50.0% | |
| CAGTCTCTGCAAAGCTTGAC+AGG | + | chr8.2:12486939-12486958 | MS.gene041415:CDS | 50.0% | |
| CGCAATTGTTGTCATTCCGG+TGG | - | chr8.2:12484166-12484185 | None:intergenic | 50.0% | |
| CGGAGGCAGATAAACACATG+AGG | + | chr8.2:12486556-12486575 | MS.gene041415:intron | 50.0% | |
| GCTAGATTGGTGCAGGAAAC+AGG | + | chr8.2:12488717-12488736 | MS.gene041415:CDS | 50.0% | |
| GTATCTTCGGGTGAAGGAAC+AGG | + | chr8.2:12488270-12488289 | MS.gene041415:CDS | 50.0% | |
| GTCAGACGATGAAGATGAGC+AGG | + | chr8.2:12488302-12488321 | MS.gene041415:CDS | 50.0% | |
| GTGTCTCAGAATTGCGACAC+CGG | + | chr8.2:12484265-12484284 | MS.gene041415:CDS | 50.0% | |
| TAGTCCCCACAGAGACTGAA+AGG | + | chr8.2:12488397-12488416 | MS.gene041415:CDS | 50.0% | |
| ! | ACTGCTGTTGTTGTTGTGCC+AGG | - | chr8.2:12484075-12484094 | None:intergenic | 50.0% |
| ! | GACAGCAGTACGAGGCATTT+GGG | + | chr8.2:12485391-12485410 | MS.gene041415:intron | 50.0% |
| ! | TTCTGATGGACAGCAGTACG+AGG | + | chr8.2:12485383-12485402 | MS.gene041415:intron | 50.0% |
| !! | CAAGAGTATCGACGCCATCA+AGG | - | chr8.2:12488365-12488384 | None:intergenic | 50.0% |
| !! | CTTGATGGCGTCGATACTCT+TGG | + | chr8.2:12488363-12488382 | MS.gene041415:CDS | 50.0% |
| AAAAGGGATGTGGTGTCCCC+AGG | - | chr8.2:12488537-12488556 | None:intergenic | 55.0% | |
| AAAGGGATGTGGTGTCCCCA+GGG | - | chr8.2:12488536-12488555 | None:intergenic | 55.0% | |
| AAGAGCTGGGAAACTCCCTG+GGG | + | chr8.2:12488518-12488537 | MS.gene041415:CDS | 55.0% | |
| ACAAGCCATCACTGCCTCCA+TGG | - | chr8.2:12486907-12486926 | None:intergenic | 55.0% | |
| AGAAGAGCTGGGAAACTCCC+TGG | + | chr8.2:12488516-12488535 | MS.gene041415:CDS | 55.0% | |
| AGCAGGCAGAGAGTAACGCT+AGG | + | chr8.2:12488319-12488338 | MS.gene041415:CDS | 55.0% | |
| CTGCCTCCATGGCATGAACA+CGG | - | chr8.2:12486896-12486915 | None:intergenic | 55.0% | |
| GAAAGCTTGGGAGTCCAGTG+AGG | - | chr8.2:12484639-12484658 | None:intergenic | 55.0% | |
| GAAGAGCTGGGAAACTCCCT+GGG | + | chr8.2:12488517-12488536 | MS.gene041415:CDS | 55.0% | |
| GAGGCAAAATCTGAGGGGGT+TGG | - | chr8.2:12488135-12488154 | None:intergenic | 55.0% | |
| GCAGGTGTATCTTCGGGTGA+AGG | + | chr8.2:12488264-12488283 | MS.gene041415:intron | 55.0% | |
| TCAGTCTCTGTGGGGACTAG+AGG | - | chr8.2:12488396-12488415 | None:intergenic | 55.0% | |
| TCATGCCATGGAGGCAGTGA+TGG | + | chr8.2:12486899-12486918 | MS.gene041415:CDS | 55.0% | |
| TGTCCGTGTTCATGCCATGG+AGG | + | chr8.2:12486890-12486909 | MS.gene041415:CDS | 55.0% | |
| ! | CACCGGTTGATCAGCTTCCA+AGG | + | chr8.2:12484282-12484301 | MS.gene041415:CDS | 55.0% |
| ! | GGACAGCAGTACGAGGCATT+TGG | + | chr8.2:12485390-12485409 | MS.gene041415:intron | 55.0% |
| ! | TGGAGGCAGTGATGGCTTGT+TGG | + | chr8.2:12486907-12486926 | MS.gene041415:CDS | 55.0% |
| !! | GGAGGCAGTGATGGCTTGTT+GGG | + | chr8.2:12486908-12486927 | MS.gene041415:CDS | 55.0% |
| !! | GGCGTCGATACTCTTGGCTT+TGG | + | chr8.2:12488369-12488388 | MS.gene041415:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 12483996 | 12488841 | 12483996 | ID=MS.gene041415 |
| chr8.2 | mRNA | 12483996 | 12488841 | 12483996 | ID=MS.gene041415.t1;Parent=MS.gene041415 |
| chr8.2 | exon | 12483996 | 12484400 | 12483996 | ID=MS.gene041415.t1.exon1;Parent=MS.gene041415.t1 |
| chr8.2 | CDS | 12483996 | 12484400 | 12483996 | ID=cds.MS.gene041415.t1;Parent=MS.gene041415.t1 |
| chr8.2 | exon | 12486840 | 12486960 | 12486840 | ID=MS.gene041415.t1.exon2;Parent=MS.gene041415.t1 |
| chr8.2 | CDS | 12486840 | 12486960 | 12486840 | ID=cds.MS.gene041415.t1;Parent=MS.gene041415.t1 |
| chr8.2 | exon | 12488268 | 12488468 | 12488268 | ID=MS.gene041415.t1.exon3;Parent=MS.gene041415.t1 |
| chr8.2 | CDS | 12488268 | 12488468 | 12488268 | ID=cds.MS.gene041415.t1;Parent=MS.gene041415.t1 |
| chr8.2 | exon | 12488499 | 12488599 | 12488499 | ID=MS.gene041415.t1.exon4;Parent=MS.gene041415.t1 |
| chr8.2 | CDS | 12488499 | 12488599 | 12488499 | ID=cds.MS.gene041415.t1;Parent=MS.gene041415.t1 |
| chr8.2 | exon | 12488705 | 12488841 | 12488705 | ID=MS.gene041415.t1.exon5;Parent=MS.gene041415.t1 |
| chr8.2 | CDS | 12488705 | 12488841 | 12488705 | ID=cds.MS.gene041415.t1;Parent=MS.gene041415.t1 |
| Gene Sequence |
| Protein sequence |
