Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041416.t1 | XP_013466739.1 | 41.1 | 370 | 152 | 8 | 1 | 367 | 1 | 307 | 3.40E-50 | 209.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041416.t1 | A0A072VRN1 | 41.1 | 370 | 152 | 8 | 1 | 367 | 1 | 307 | 2.4e-50 | 209.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene041416.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041416.t1 | MTR_1g034500 | 51.892 | 370 | 112 | 7 | 1 | 367 | 1 | 307 | 2.39e-111 | 327 |
| MS.gene041416.t1 | MTR_2g045670 | 41.033 | 368 | 110 | 8 | 1 | 367 | 20 | 281 | 7.68e-71 | 223 |
| MS.gene041416.t1 | MTR_2g045700 | 41.463 | 369 | 116 | 8 | 1 | 367 | 1 | 271 | 9.03e-66 | 209 |
| MS.gene041416.t1 | MTR_2g045630 | 45.588 | 272 | 111 | 7 | 96 | 366 | 42 | 277 | 3.76e-54 | 180 |
| MS.gene041416.t1 | MTR_8g077950 | 39.773 | 88 | 51 | 1 | 276 | 361 | 250 | 337 | 1.40e-13 | 71.2 |
| MS.gene041416.t1 | MTR_8g077950 | 39.773 | 88 | 51 | 1 | 276 | 361 | 252 | 339 | 1.43e-13 | 71.2 |
| MS.gene041416.t1 | MTR_8g077950 | 39.773 | 88 | 51 | 1 | 276 | 361 | 192 | 279 | 3.64e-13 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041416.t1 | AT4G36730 | 36.250 | 80 | 51 | 0 | 282 | 361 | 220 | 299 | 2.20e-11 | 64.7 |
| MS.gene041416.t1 | AT4G36730 | 36.250 | 80 | 51 | 0 | 282 | 361 | 222 | 301 | 2.38e-11 | 64.7 |
Find 67 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTACAGGTTGTGAGTTTC+TGG | 0.129427 | 8.2:-12465248 | None:intergenic |
| CTCAGCTAGTAGAGATTTAT+TGG | 0.150152 | 8.2:-12464894 | None:intergenic |
| TCCCCAGTTATTAATCTTAC+AGG | 0.249858 | 8.2:-12465262 | None:intergenic |
| GTAAATAATTGGTTGGAATC+TGG | 0.251335 | 8.2:-12465226 | None:intergenic |
| GAGAACAAGGATTTATCTTT+TGG | 0.256634 | 8.2:+12466467 | MS.gene041416:CDS |
| GTGAGTTTCTGGTAAATAAT+TGG | 0.270018 | 8.2:-12465237 | None:intergenic |
| CAAAGAAATTGTTGTAATAC+TGG | 0.291279 | 8.2:-12465360 | None:intergenic |
| ACTGGGGAATCAAGTGAATA+TGG | 0.297191 | 8.2:+12465277 | MS.gene041416:CDS |
| GAGAACAAGGTTAAGGAAAA+AGG | 0.303213 | 8.2:+12468035 | MS.gene041416:CDS |
| TGCAGGTGGATGATTATAAT+AGG | 0.311712 | 8.2:-12464614 | None:intergenic |
| CAACCTGTAAGATTAATAAC+TGG | 0.342383 | 8.2:+12465259 | MS.gene041416:CDS |
| TGATGCTCAACTAAAATATA+TGG | 0.343775 | 8.2:+12466750 | MS.gene041416:CDS |
| TGCAATTGCTTTCTCAGAAA+TGG | 0.357172 | 8.2:+12465177 | MS.gene041416:CDS |
| GGATGATTATAATAGGGATT+TGG | 0.374399 | 8.2:-12464607 | None:intergenic |
| CTTGGCTGATTCAGAGTTTG+AGG | 0.379924 | 8.2:+12466692 | MS.gene041416:CDS |
| TGTGGCAGCATAGGATTGTT+TGG | 0.381160 | 8.2:-12464248 | None:intergenic |
| ATCTGTGCTGAGTCAAACTT+TGG | 0.386345 | 8.2:+12465393 | MS.gene041416:CDS |
| TAAATAATTGGTTGGAATCT+GGG | 0.388774 | 8.2:-12465225 | None:intergenic |
| TGACGCTCGACTAAATAATA+TGG | 0.389843 | 8.2:+12465441 | MS.gene041416:CDS |
| AAGTTATTCTGAGGCATGTC+TGG | 0.390063 | 8.2:+12469045 | MS.gene041416:CDS |
| GAAGAGCTAATTAAGGAGTA+TGG | 0.396074 | 8.2:+12469521 | MS.gene041416:CDS |
| CAATCCTATGCTGCCACATT+GGG | 0.402800 | 8.2:+12464253 | MS.gene041416:CDS |
| CAGATATCTAAGATGAATGT+TGG | 0.419613 | 8.2:+12466437 | MS.gene041416:CDS |
| AGATATCTAAGATGAATGTT+GGG | 0.419993 | 8.2:+12466438 | MS.gene041416:CDS |
| TCAGTACATGTGGCAAAATC+AGG | 0.421341 | 8.2:+12464717 | MS.gene041416:CDS |
| GATTTATTGGAGAGCTTCAC+AGG | 0.424141 | 8.2:-12464881 | None:intergenic |
| GATATCTGCTTCTTACATAT+AGG | 0.425971 | 8.2:-12466422 | None:intergenic |
| ACATTGGGCTTCATCTATGC+AGG | 0.450861 | 8.2:+12464268 | MS.gene041416:CDS |
| GGAACAGGAAGAGCTAATTA+AGG | 0.452723 | 8.2:+12469514 | MS.gene041416:intron |
| CAGCTAAGAGAACAAGGTTA+AGG | 0.453072 | 8.2:+12468028 | MS.gene041416:CDS |
| AAAGAAGAATCCGATCCATC+TGG | 0.459016 | 8.2:+12464088 | MS.gene041416:CDS |
| TCTGTGCTGAGTCAAACTTT+GGG | 0.467374 | 8.2:+12465394 | MS.gene041416:CDS |
| GCAGGTGGATGATTATAATA+GGG | 0.469270 | 8.2:-12464613 | None:intergenic |
| AAAGTTTGACTCAGCACAGA+TGG | 0.498013 | 8.2:-12465391 | None:intergenic |
| GTTTCTGGTAAATAATTGGT+TGG | 0.499066 | 8.2:-12465233 | None:intergenic |
| TTGAATCATCAGTATGCAGC+TGG | 0.509107 | 8.2:+12464679 | MS.gene041416:CDS |
| CTGAGTCAAACTTTGGGGAC+AGG | 0.511343 | 8.2:+12465400 | MS.gene041416:CDS |
| CTTTCTCAGAAATGGTAAGC+AGG | 0.515920 | 8.2:+12465185 | MS.gene041416:CDS |
| TGAGGTACCACAAAATAGTA+AGG | 0.518570 | 8.2:-12464115 | None:intergenic |
| ACAATCCTATGCTGCCACAT+TGG | 0.521704 | 8.2:+12464252 | MS.gene041416:CDS |
| AAACTCTGAATCAGCCAAGA+TGG | 0.521783 | 8.2:-12466688 | None:intergenic |
| GAAGCCCAATGTGGCAGCAT+AGG | 0.526989 | 8.2:-12464257 | None:intergenic |
| TATAATCATCCACCTGCAGC+TGG | 0.532701 | 8.2:+12464619 | MS.gene041416:CDS |
| CAGTTACAATGTCAAGCAGC+AGG | 0.542255 | 8.2:-12469578 | None:intergenic |
| AACCTGTAAGATTAATAACT+GGG | 0.551341 | 8.2:+12465260 | MS.gene041416:CDS |
| AAATAGTAAGGTCTTCCAGA+TGG | 0.566947 | 8.2:-12464103 | None:intergenic |
| AACTTTGGGGACAGGCGTCA+AGG | 0.567206 | 8.2:+12465408 | MS.gene041416:CDS |
| GTTAAAATGATGAACCTCGA+TGG | 0.568844 | 8.2:-12469089 | None:intergenic |
| CTCATGTAAGAACCAGCTGC+AGG | 0.577655 | 8.2:-12464631 | None:intergenic |
| TGTTGGGGATGGTGAGAACA+AGG | 0.580631 | 8.2:+12466454 | MS.gene041416:CDS |
| ATAGGGATTTGGAGTAAACT+CGG | 0.582242 | 8.2:-12464596 | None:intergenic |
| GTAAGGTCTTCCAGATGGAT+CGG | 0.588408 | 8.2:-12464098 | None:intergenic |
| CTGTGCTGAGTCAAACTTTG+GGG | 0.590960 | 8.2:+12465395 | MS.gene041416:CDS |
| GAAATCTAAGATGACTGTTG+AGG | 0.593683 | 8.2:+12466502 | MS.gene041416:CDS |
| TAGGGATTTGGAGTAAACTC+GGG | 0.602326 | 8.2:-12464595 | None:intergenic |
| CATGATTCACTGACATCTTG+AGG | 0.602539 | 8.2:-12464133 | None:intergenic |
| CAATAAATCTCTACTAGCTG+AGG | 0.606627 | 8.2:+12464895 | MS.gene041416:CDS |
| GGGAATCAGCTAAGAGAACA+AGG | 0.611347 | 8.2:+12468022 | MS.gene041416:CDS |
| GAGTTTGAGGACAGTCGTCA+AGG | 0.611746 | 8.2:+12466705 | MS.gene041416:CDS |
| GATATCTAAGATGAATGTTG+GGG | 0.621950 | 8.2:+12466439 | MS.gene041416:CDS |
| ACTTGAATCATCAGTACATG+TGG | 0.630018 | 8.2:+12464707 | MS.gene041416:CDS |
| ATGTAAGAACCAGCTGCAGG+TGG | 0.634873 | 8.2:-12464628 | None:intergenic |
| TCTAAGATGACTGTTGAGGA+TGG | 0.650064 | 8.2:+12466506 | MS.gene041416:CDS |
| TCTAAGATGAATGTTGGGGA+TGG | 0.657589 | 8.2:+12466443 | MS.gene041416:CDS |
| ACCTGTAAGATTAATAACTG+GGG | 0.682506 | 8.2:+12465261 | MS.gene041416:CDS |
| TGCATAGATGAAGCCCAATG+TGG | 0.703015 | 8.2:-12464266 | None:intergenic |
| TGATGAAAACGATTCCATCG+AGG | 0.749293 | 8.2:+12469075 | MS.gene041416:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAAAGAAAATTAGAATA+AGG | - | chr8.2:12468262-12468281 | None:intergenic | 10.0% |
| !! | CTAAAAGATATATTAAAAAA+TGG | - | chr8.2:12468211-12468230 | None:intergenic | 10.0% |
| !! | GATATAAAATTGAAAAAATA+AGG | - | chr8.2:12469118-12469137 | None:intergenic | 10.0% |
| !! | TATAAAATTGAAAAAATAAG+GGG | - | chr8.2:12469116-12469135 | None:intergenic | 10.0% |
| !! | TATTATAACTAACAAAATTA+TGG | - | chr8.2:12467678-12467697 | None:intergenic | 10.0% |
| !!! | ACTCATTTTAAATTTTAATT+AGG | + | chr8.2:12464561-12464580 | MS.gene041416:intron | 10.0% |
| !!! | TGAAAAAAAAAAAAACTTTT+GGG | - | chr8.2:12468236-12468255 | None:intergenic | 10.0% |
| !!! | TTGAAAAAAAAAAAAACTTT+TGG | - | chr8.2:12468237-12468256 | None:intergenic | 10.0% |
| !! | AATGAAATAAACTAAAAACT+AGG | + | chr8.2:12469240-12469259 | MS.gene041416:intron | 15.0% |
| !! | AATTAAATGCTAATTTAAGA+TGG | - | chr8.2:12466931-12466950 | None:intergenic | 15.0% |
| !! | ATATATTCATTGAAATATCT+AGG | - | chr8.2:12464925-12464944 | None:intergenic | 15.0% |
| !!! | AATCATTAATTTTTCATTGA+TGG | + | chr8.2:12465657-12465676 | MS.gene041416:intron | 15.0% |
| !!! | ATTAAATGCTAATTTAAGAT+GGG | - | chr8.2:12466930-12466949 | None:intergenic | 15.0% |
| !!! | GAAAAAAAAAAAAACTTTTG+GGG | - | chr8.2:12468235-12468254 | None:intergenic | 15.0% |
| !!! | TTAGATATTCTTAATTTTGT+TGG | + | chr8.2:12467611-12467630 | MS.gene041416:intron | 15.0% |
| !!! | TTTTCTAATCATAATTTCTA+TGG | + | chr8.2:12464968-12464987 | MS.gene041416:intron | 15.0% |
| !! | AAAAAGAAATGAAAACAGTT+AGG | + | chr8.2:12469281-12469300 | MS.gene041416:intron | 20.0% |
| !! | AAAATTATGGCTAGAATTAT+AGG | - | chr8.2:12467665-12467684 | None:intergenic | 20.0% |
| !! | AAACTTATACACAATTCATT+AGG | - | chr8.2:12465115-12465134 | None:intergenic | 20.0% |
| !! | AAATTATGGCTAGAATTATA+GGG | - | chr8.2:12467664-12467683 | None:intergenic | 20.0% |
| !! | AAGATTAATTCTTAACTATC+TGG | + | chr8.2:12467912-12467931 | MS.gene041416:intron | 20.0% |
| !! | AGGAAATTTCATATTTCTTT+AGG | + | chr8.2:12465021-12465040 | MS.gene041416:intron | 20.0% |
| !! | ATCAATTTATTCTTCATTAC+AGG | + | chr8.2:12466339-12466358 | MS.gene041416:intron | 20.0% |
| !! | ATTCATTGTTAAAATGTAGT+AGG | + | chr8.2:12465955-12465974 | MS.gene041416:intron | 20.0% |
| !! | GATTATGATTATACATGTTA+GGG | + | chr8.2:12468666-12468685 | MS.gene041416:intron | 20.0% |
| !! | GCTAAAATGACATATAATTT+GGG | + | chr8.2:12465714-12465733 | MS.gene041416:intron | 20.0% |
| !! | TAATAAGTGCTTAAAATGTT+TGG | - | chr8.2:12467313-12467332 | None:intergenic | 20.0% |
| !! | TATAGTTAGTATACATTTAG+AGG | + | chr8.2:12465001-12465020 | MS.gene041416:intron | 20.0% |
| !! | TATGATTGTTGTATATTCAT+CGG | + | chr8.2:12468752-12468771 | MS.gene041416:intron | 20.0% |
| !! | TCTTAGATATTGGAATTAAT+GGG | + | chr8.2:12466238-12466257 | MS.gene041416:intron | 20.0% |
| !! | TGATTATGATTATACATGTT+AGG | + | chr8.2:12468665-12468684 | MS.gene041416:intron | 20.0% |
| !! | TGCTAAAATGACATATAATT+TGG | + | chr8.2:12465713-12465732 | MS.gene041416:intron | 20.0% |
| !!! | AAACATTTTAAGCACTTATT+AGG | + | chr8.2:12467312-12467331 | MS.gene041416:intron | 20.0% |
| !!! | AACTTTTTAGTTGTTTTGTT+AGG | - | chr8.2:12469030-12469049 | None:intergenic | 20.0% |
| !!! | ATACCAATATTTATGCATTT+TGG | + | chr8.2:12465145-12465164 | MS.gene041416:intron | 20.0% |
| !!! | CAATTAGTTTAGTCAAATAT+AGG | + | chr8.2:12468333-12468352 | MS.gene041416:intron | 20.0% |
| !!! | GTATCTAAGATATATAAAGT+AGG | - | chr8.2:12467031-12467050 | None:intergenic | 20.0% |
| !!! | GTTTGAAAAGGTTTTATTTA+TGG | + | chr8.2:12466804-12466823 | MS.gene041416:intron | 20.0% |
| !!! | TATATTGAGCTTTAAATTGT+TGG | + | chr8.2:12467569-12467588 | MS.gene041416:intron | 20.0% |
| !!! | TTTTCACATTCTTTGTTTTT+CGG | + | chr8.2:12464814-12464833 | MS.gene041416:intron | 20.0% |
| ! | AAAACTGTAAAAAAAAGTCG+TGG | + | chr8.2:12468177-12468196 | MS.gene041416:intron | 25.0% |
| ! | AAACTGTAAAAAAAAGTCGT+GGG | + | chr8.2:12468178-12468197 | MS.gene041416:intron | 25.0% |
| ! | AAAGAAAAAGACAATCAAAC+AGG | + | chr8.2:12468001-12468020 | MS.gene041416:CDS | 25.0% |
| ! | AAAGATACTAATTGGCAATT+TGG | - | chr8.2:12468789-12468808 | None:intergenic | 25.0% |
| ! | AACCTGTAAGATTAATAACT+GGG | + | chr8.2:12465260-12465279 | MS.gene041416:CDS | 25.0% |
| ! | AAGAAAAAGACAATCAAACA+GGG | + | chr8.2:12468002-12468021 | MS.gene041416:CDS | 25.0% |
| ! | AAGAAATGGGTAGTTTATTA+AGG | + | chr8.2:12466305-12466324 | MS.gene041416:intron | 25.0% |
| ! | AATATCTATGATTTCGACAA+TGG | + | chr8.2:12468142-12468161 | MS.gene041416:intron | 25.0% |
| ! | ACAACTAAAAAGTTATTCTG+AGG | + | chr8.2:12469036-12469055 | MS.gene041416:CDS | 25.0% |
| ! | ACAATCATGTTCCAAATAAA+GGG | - | chr8.2:12468640-12468659 | None:intergenic | 25.0% |
| ! | ATAGAGAAATAAACAGCTAA+TGG | + | chr8.2:12465620-12465639 | MS.gene041416:intron | 25.0% |
| ! | ATATCTAACAAGATTTGAGA+TGG | - | chr8.2:12467599-12467618 | None:intergenic | 25.0% |
| ! | ATGAAAGGCTTATAAATGAT+AGG | - | chr8.2:12467800-12467819 | None:intergenic | 25.0% |
| ! | ATGAGACAATGTATCTTTAA+GGG | - | chr8.2:12467064-12467083 | None:intergenic | 25.0% |
| ! | ATTCACTGTTGAAATATAGT+AGG | + | chr8.2:12466966-12466985 | MS.gene041416:intron | 25.0% |
| ! | ATTTCATATTTCTTTAGGTG+CGG | + | chr8.2:12465026-12465045 | MS.gene041416:intron | 25.0% |
| ! | CAAAGAAATTGTTGTAATAC+TGG | - | chr8.2:12465363-12465382 | None:intergenic | 25.0% |
| ! | CTCTTAGATATTGGAATTAA+TGG | + | chr8.2:12466237-12466256 | MS.gene041416:intron | 25.0% |
| ! | GAAGTGTAATTAATGTTGTA+TGG | + | chr8.2:12465516-12465535 | MS.gene041416:intron | 25.0% |
| ! | GATACATATTTAAATCCCTT+AGG | + | chr8.2:12466035-12466054 | MS.gene041416:intron | 25.0% |
| ! | GGTAATGATGTACATATTTA+TGG | + | chr8.2:12464738-12464757 | MS.gene041416:intron | 25.0% |
| ! | GGTGTAAAATGACATAATTT+GGG | + | chr8.2:12465678-12465697 | MS.gene041416:intron | 25.0% |
| ! | GTTTCCTTATTATGAACTTA+TGG | + | chr8.2:12468595-12468614 | MS.gene041416:intron | 25.0% |
| ! | TAAAATTTGAATGCTCAGAA+AGG | + | chr8.2:12466586-12466605 | MS.gene041416:intron | 25.0% |
| ! | TAAATAATTGGTTGGAATCT+GGG | - | chr8.2:12465228-12465247 | None:intergenic | 25.0% |
| ! | TACAATCATGTTCCAAATAA+AGG | - | chr8.2:12468641-12468660 | None:intergenic | 25.0% |
| ! | TAGAATGTTGGATTGTAAAA+TGG | - | chr8.2:12467837-12467856 | None:intergenic | 25.0% |
| ! | TATGAGACAATGTATCTTTA+AGG | - | chr8.2:12467065-12467084 | None:intergenic | 25.0% |
| ! | TATGTATCGAAGATACATAA+AGG | - | chr8.2:12466023-12466042 | None:intergenic | 25.0% |
| ! | TCAAAAAAGTAAGTTTGCAT+GGG | - | chr8.2:12466872-12466891 | None:intergenic | 25.0% |
| ! | TGACCAAAATGCATAAATAT+TGG | - | chr8.2:12465151-12465170 | None:intergenic | 25.0% |
| ! | TGATGCTCAACTAAAATATA+TGG | + | chr8.2:12466750-12466769 | MS.gene041416:CDS | 25.0% |
| ! | TGGTAATCAAAGATACTAAT+TGG | - | chr8.2:12468797-12468816 | None:intergenic | 25.0% |
| ! | TGGTGTAAAATGACATAATT+TGG | + | chr8.2:12465677-12465696 | MS.gene041416:intron | 25.0% |
| ! | TTCAAAAAAGTAAGTTTGCA+TGG | - | chr8.2:12466873-12466892 | None:intergenic | 25.0% |
| !! | AATATATATAGTGTGTCGAT+GGG | - | chr8.2:12467555-12467574 | None:intergenic | 25.0% |
| !! | AATTTTCGTGAAATTGTCAA+AGG | - | chr8.2:12465494-12465513 | None:intergenic | 25.0% |
| !! | AGATATCTAAGATGAATGTT+GGG | + | chr8.2:12466438-12466457 | MS.gene041416:CDS | 25.0% |
| !! | AGTTATAATATGTTTTCGTG+TGG | + | chr8.2:12467688-12467707 | MS.gene041416:intron | 25.0% |
| !! | ATGTCATCTTTTCTTTCTTT+AGG | - | chr8.2:12465988-12466007 | None:intergenic | 25.0% |
| !! | ATTCAACTAAAGTACTTGTT+TGG | + | chr8.2:12469142-12469161 | MS.gene041416:intron | 25.0% |
| !! | ATTTTCGTGAAATTGTCAAA+GGG | - | chr8.2:12465493-12465512 | None:intergenic | 25.0% |
| !! | CAATATTTTCTGCAATTATG+AGG | - | chr8.2:12468121-12468140 | None:intergenic | 25.0% |
| !! | GGAGTACTATTAAATGTTAT+AGG | + | chr8.2:12465742-12465761 | MS.gene041416:intron | 25.0% |
| !! | TTATTCAAAGCTTTTGATGT+TGG | + | chr8.2:12469401-12469420 | MS.gene041416:intron | 25.0% |
| !! | TTTATTTGGAACATGATTGT+AGG | + | chr8.2:12468640-12468659 | MS.gene041416:intron | 25.0% |
| !! | TTTTCATAGCATGTTTGAAA+AGG | + | chr8.2:12466792-12466811 | MS.gene041416:intron | 25.0% |
| !! | TTTTCTACGGCAATTATAAA+TGG | - | chr8.2:12466080-12466099 | None:intergenic | 25.0% |
| !! | TTTTTGTAGCATGTTTGAAA+AGG | + | chr8.2:12465765-12465784 | MS.gene041416:intron | 25.0% |
| !!! | AACCCTTGTAATTTTTTCTA+CGG | - | chr8.2:12466093-12466112 | None:intergenic | 25.0% |
| !!! | AAGAAACAATGTTTTTAGCT+TGG | + | chr8.2:12468445-12468464 | MS.gene041416:intron | 25.0% |
| !!! | AAGTTTTATATGTTTCCATG+AGG | - | chr8.2:12468894-12468913 | None:intergenic | 25.0% |
| !!! | AATATTTATGCATTTTGGTC+AGG | + | chr8.2:12465150-12465169 | MS.gene041416:intron | 25.0% |
| !!! | GTTTGAAAAGGTTTTATTTG+TGG | + | chr8.2:12465777-12465796 | MS.gene041416:intron | 25.0% |
| AAAATTTGCAACTACCACAT+TGG | - | chr8.2:12468817-12468836 | None:intergenic | 30.0% | |
| AAAGAATGTGAAAATGAAGC+AGG | - | chr8.2:12464808-12464827 | None:intergenic | 30.0% | |
| AACTCAACCTCATAAGAAAT+GGG | + | chr8.2:12466292-12466311 | MS.gene041416:intron | 30.0% | |
| AAGAGATGTAAACAAAGTCA+AGG | - | chr8.2:12468853-12468872 | None:intergenic | 30.0% | |
| AATGTTGGATTGTAAAATGG+TGG | - | chr8.2:12467834-12467853 | None:intergenic | 30.0% | |
| ACCTGTAAGATTAATAACTG+GGG | + | chr8.2:12465261-12465280 | MS.gene041416:CDS | 30.0% | |
| AGCACCATAAGTTCATAATA+AGG | - | chr8.2:12468602-12468621 | None:intergenic | 30.0% | |
| AGTATCTTTGATTACCAATG+TGG | + | chr8.2:12468800-12468819 | MS.gene041416:intron | 30.0% | |
| ATGAAAACAGTTAGGATGTT+AGG | + | chr8.2:12469289-12469308 | MS.gene041416:intron | 30.0% | |
| ATGAACTGCAATACAAGTTT+CGG | - | chr8.2:12466621-12466640 | None:intergenic | 30.0% | |
| ATGGTACTGTAGAATGTTAT+GGG | + | chr8.2:12466769-12466788 | MS.gene041416:intron | 30.0% | |
| CAACAAACTTTCCCTTTATT+TGG | + | chr8.2:12468626-12468645 | MS.gene041416:intron | 30.0% | |
| CAACCTGTAAGATTAATAAC+TGG | + | chr8.2:12465259-12465278 | MS.gene041416:CDS | 30.0% | |
| CAATATATATAGTGTGTCGA+TGG | - | chr8.2:12467556-12467575 | None:intergenic | 30.0% | |
| CATATCTTAGTTTCCTTCAT+TGG | + | chr8.2:12468511-12468530 | MS.gene041416:intron | 30.0% | |
| CGGTAATAATTTGAGAATGT+TGG | + | chr8.2:12467450-12467469 | MS.gene041416:intron | 30.0% | |
| GAAAAGAAATGCAGCTAAAT+AGG | - | chr8.2:12467955-12467974 | None:intergenic | 30.0% | |
| GAATTAATCTTAGCAACCTT+AGG | - | chr8.2:12467903-12467922 | None:intergenic | 30.0% | |
| GATATCTGCTTCTTACATAT+AGG | - | chr8.2:12466425-12466444 | None:intergenic | 30.0% | |
| GGATGATTATAATAGGGATT+TGG | - | chr8.2:12464610-12464629 | None:intergenic | 30.0% | |
| GTAAATAATTGGTTGGAATC+TGG | - | chr8.2:12465229-12465248 | None:intergenic | 30.0% | |
| GTCAAAGGGACATATAATTT+GGG | - | chr8.2:12465479-12465498 | None:intergenic | 30.0% | |
| TAAACTACCCATTTCTTATG+AGG | - | chr8.2:12466302-12466321 | None:intergenic | 30.0% | |
| TAACTCAACCTCATAAGAAA+TGG | + | chr8.2:12466291-12466310 | MS.gene041416:intron | 30.0% | |
| TATGGTACTGTAGAATGTTA+TGG | + | chr8.2:12466768-12466787 | MS.gene041416:intron | 30.0% | |
| TCAAGTTATGTTCTAACACA+AGG | - | chr8.2:12467390-12467409 | None:intergenic | 30.0% | |
| TCTTTGTAGAAAAACCATCT+TGG | + | chr8.2:12466674-12466693 | MS.gene041416:intron | 30.0% | |
| TGCCGTAGAAAAAATTACAA+GGG | + | chr8.2:12466088-12466107 | MS.gene041416:intron | 30.0% | |
| TGCTTTGTATCAATTTGTGA+TGG | + | chr8.2:12464305-12464324 | MS.gene041416:intron | 30.0% | |
| TGTCAAAGGGACATATAATT+TGG | - | chr8.2:12465480-12465499 | None:intergenic | 30.0% | |
| TTCTCAAATTATTACCGAGT+CGG | - | chr8.2:12467447-12467466 | None:intergenic | 30.0% | |
| TTGCCGTAGAAAAAATTACA+AGG | + | chr8.2:12466087-12466106 | MS.gene041416:intron | 30.0% | |
| TTTCATATTTCTTTAGGTGC+GGG | + | chr8.2:12465027-12465046 | MS.gene041416:intron | 30.0% | |
| ! | ACAAGGATTTATCTTTTGGT+TGG | + | chr8.2:12466471-12466490 | MS.gene041416:CDS | 30.0% |
| ! | ATATATATAGTGTGTCGATG+GGG | - | chr8.2:12467554-12467573 | None:intergenic | 30.0% |
| ! | ATGATTGCTTTGTGATTTGT+CGG | + | chr8.2:12464441-12464460 | MS.gene041416:intron | 30.0% |
| ! | CAGATATCTAAGATGAATGT+TGG | + | chr8.2:12466437-12466456 | MS.gene041416:CDS | 30.0% |
| ! | GAGAACAAGGATTTATCTTT+TGG | + | chr8.2:12466467-12466486 | MS.gene041416:CDS | 30.0% |
| ! | GAGAGTAAGGATTTATCTTT+TGG | + | chr8.2:12466530-12466549 | MS.gene041416:intron | 30.0% |
| ! | GATATCTAAGATGAATGTTG+GGG | + | chr8.2:12466439-12466458 | MS.gene041416:CDS | 30.0% |
| ! | GGTCTTATGCTTAAAATCTT+TGG | + | chr8.2:12466360-12466379 | MS.gene041416:intron | 30.0% |
| ! | GTCTAATTTTATCCTTTCTG+TGG | + | chr8.2:12466390-12466409 | MS.gene041416:intron | 30.0% |
| ! | TAATTCTGAGTGTTGTATTG+TGG | + | chr8.2:12469437-12469456 | MS.gene041416:intron | 30.0% |
| !! | GTGAGTTTCTGGTAAATAAT+TGG | - | chr8.2:12465240-12465259 | None:intergenic | 30.0% |
| !! | GTTTCTGGTAAATAATTGGT+TGG | - | chr8.2:12465236-12465255 | None:intergenic | 30.0% |
| AAAACAGTTAGGATGTTAGG+TGG | + | chr8.2:12469292-12469311 | MS.gene041416:intron | 35.0% | |
| AAATAGTAAGGTCTTCCAGA+TGG | - | chr8.2:12464106-12464125 | None:intergenic | 35.0% | |
| AATCTTAGCAACCTTAGGAA+GGG | - | chr8.2:12467898-12467917 | None:intergenic | 35.0% | |
| AATTATAGGGTCTAGGTAGA+TGG | - | chr8.2:12467651-12467670 | None:intergenic | 35.0% | |
| ACTCAAATTAGCAGCAAACT+TGG | - | chr8.2:12469481-12469500 | None:intergenic | 35.0% | |
| ACTTGAATCATCAGTACATG+TGG | + | chr8.2:12464707-12464726 | MS.gene041416:CDS | 35.0% | |
| AGAAAGTAAATCCCTTCCTA+AGG | + | chr8.2:12467884-12467903 | MS.gene041416:intron | 35.0% | |
| AGTTTGTCATAGTTTCCTCA+TGG | + | chr8.2:12468876-12468895 | MS.gene041416:intron | 35.0% | |
| ATGAAACTGATCACCAATGA+AGG | - | chr8.2:12468527-12468546 | None:intergenic | 35.0% | |
| ATGTAGAGACAATGTACCTA+AGG | - | chr8.2:12466054-12466073 | None:intergenic | 35.0% | |
| CAATAAATCTCTACTAGCTG+AGG | + | chr8.2:12464895-12464914 | MS.gene041416:CDS | 35.0% | |
| CACTTTAGACGGATAAAGAT+AGG | + | chr8.2:12468383-12468402 | MS.gene041416:intron | 35.0% | |
| CTAGGTAGATGGTGAAATTA+TGG | - | chr8.2:12467640-12467659 | None:intergenic | 35.0% | |
| CTCAGCTAGTAGAGATTTAT+TGG | - | chr8.2:12464897-12464916 | None:intergenic | 35.0% | |
| CTGCTAATTTGAGTGTGATT+GGG | + | chr8.2:12469487-12469506 | MS.gene041416:intron | 35.0% | |
| GAAGAGCTAATTAAGGAGTA+TGG | + | chr8.2:12469521-12469540 | MS.gene041416:CDS | 35.0% | |
| GACATATCTAGCTAGAATGT+TGG | - | chr8.2:12467849-12467868 | None:intergenic | 35.0% | |
| GAGAACAAGGTTAAGGAAAA+AGG | + | chr8.2:12468035-12468054 | MS.gene041416:CDS | 35.0% | |
| GATGTCAGTGAATCATGTTA+TGG | + | chr8.2:12464139-12464158 | MS.gene041416:intron | 35.0% | |
| GCAGGTGGATGATTATAATA+GGG | - | chr8.2:12464616-12464635 | None:intergenic | 35.0% | |
| GCATAGGTTCTCTTAGATAT+TGG | + | chr8.2:12466228-12466247 | MS.gene041416:intron | 35.0% | |
| GTATCGAAGATACATAAAGG+AGG | - | chr8.2:12466020-12466039 | None:intergenic | 35.0% | |
| GTGGTAGCATTTCATATGAA+AGG | - | chr8.2:12467815-12467834 | None:intergenic | 35.0% | |
| GTTAAAATGATGAACCTCGA+TGG | - | chr8.2:12469092-12469111 | None:intergenic | 35.0% | |
| TAATCTTAGCAACCTTAGGA+AGG | - | chr8.2:12467899-12467918 | None:intergenic | 35.0% | |
| TAGGTACATTGTCTCTACAT+AGG | + | chr8.2:12466054-12466073 | MS.gene041416:intron | 35.0% | |
| TCAGCACCAAAAATTGATGT+TGG | + | chr8.2:12465310-12465329 | MS.gene041416:CDS | 35.0% | |
| TCCCCAGTTATTAATCTTAC+AGG | - | chr8.2:12465265-12465284 | None:intergenic | 35.0% | |
| TGACGCTCGACTAAATAATA+TGG | + | chr8.2:12465441-12465460 | MS.gene041416:CDS | 35.0% | |
| TGCAATTGCTTTCTCAGAAA+TGG | + | chr8.2:12465177-12465196 | MS.gene041416:CDS | 35.0% | |
| TGCAGGTGGATGATTATAAT+AGG | - | chr8.2:12464617-12464636 | None:intergenic | 35.0% | |
| TGTAGAGACAATGTACCTAA+GGG | - | chr8.2:12466053-12466072 | None:intergenic | 35.0% | |
| TGTCTTCTGATCAACTTATC+TGG | - | chr8.2:12468488-12468507 | None:intergenic | 35.0% | |
| TTCAAATACCAGTCTCACAT+TGG | - | chr8.2:12469342-12469361 | None:intergenic | 35.0% | |
| TTCATATTTCTTTAGGTGCG+GGG | + | chr8.2:12465028-12465047 | MS.gene041416:intron | 35.0% | |
| TTTGAGAATGTTGGATACTC+TGG | + | chr8.2:12467459-12467478 | MS.gene041416:intron | 35.0% | |
| ! | AAAAGGTACATACTAGACCA+TGG | + | chr8.2:12468052-12468071 | MS.gene041416:intron | 35.0% |
| ! | AATTTTATCCTTTCTGTGGC+AGG | + | chr8.2:12466394-12466413 | MS.gene041416:intron | 35.0% |
| ! | ATAGGGATTTGGAGTAAACT+CGG | - | chr8.2:12464599-12464618 | None:intergenic | 35.0% |
| ! | ATAGTTGCTTTCTTAGACCA+TGG | + | chr8.2:12464769-12464788 | MS.gene041416:intron | 35.0% |
| ! | ATGACATATAATTTGGGACG+AGG | + | chr8.2:12465720-12465739 | MS.gene041416:intron | 35.0% |
| ! | GAAATCTAAGATGACTGTTG+AGG | + | chr8.2:12466502-12466521 | MS.gene041416:CDS | 35.0% |
| ! | GCATCTCCAACATCAATTTT+TGG | - | chr8.2:12465319-12465338 | None:intergenic | 35.0% |
| ! | GGACTTGAGTCTTTTCAAAT+AGG | + | chr8.2:12467355-12467374 | MS.gene041416:intron | 35.0% |
| ! | TAAAGTGAGAGTATGTGCTA+AGG | - | chr8.2:12466160-12466179 | None:intergenic | 35.0% |
| ! | TGACATATAATTTGGGACGA+GGG | + | chr8.2:12465721-12465740 | MS.gene041416:intron | 35.0% |
| ! | TGAGGTACCACAAAATAGTA+AGG | - | chr8.2:12464118-12464137 | None:intergenic | 35.0% |
| ! | TGGAAGACCTTACTATTTTG+TGG | + | chr8.2:12464108-12464127 | MS.gene041416:CDS | 35.0% |
| ! | TTAGCTGCATTTCTTTTCTC+AGG | + | chr8.2:12467957-12467976 | MS.gene041416:intron | 35.0% |
| !! | GGATTTATCTTTTGGTTGGA+AGG | + | chr8.2:12466475-12466494 | MS.gene041416:CDS | 35.0% |
| !!! | AACATCAATTTTTGGTGCTG+AGG | - | chr8.2:12465311-12465330 | None:intergenic | 35.0% |
| AAACTCTGAATCAGCCAAGA+TGG | - | chr8.2:12466691-12466710 | None:intergenic | 40.0% | |
| AAAGAAGAATCCGATCCATC+TGG | + | chr8.2:12464088-12464107 | MS.gene041416:CDS | 40.0% | |
| AAAGTTTGACTCAGCACAGA+TGG | - | chr8.2:12465394-12465413 | None:intergenic | 40.0% | |
| AATTGGCAATTTGGAAAGCC+AGG | - | chr8.2:12468780-12468799 | None:intergenic | 40.0% | |
| ACGATCACGATTGATTGACA+AGG | - | chr8.2:12464368-12464387 | None:intergenic | 40.0% | |
| ACTATAAGCAGACTGCACAT+AGG | - | chr8.2:12464183-12464202 | None:intergenic | 40.0% | |
| ACTGGGGAATCAAGTGAATA+TGG | + | chr8.2:12465277-12465296 | MS.gene041416:CDS | 40.0% | |
| AGTCTCACATTGGTAAGCAA+TGG | - | chr8.2:12469332-12469351 | None:intergenic | 40.0% | |
| AGTGGGAACATGTTAAAGTG+AGG | - | chr8.2:12467190-12467209 | None:intergenic | 40.0% | |
| ATCTGTGCTGAGTCAAACTT+TGG | + | chr8.2:12465393-12465412 | MS.gene041416:CDS | 40.0% | |
| ATGTAATTCAACCCACTGAG+TGG | + | chr8.2:12468710-12468729 | MS.gene041416:intron | 40.0% | |
| ATTGCTTACCAATGTGAGAC+TGG | + | chr8.2:12469331-12469350 | MS.gene041416:intron | 40.0% | |
| CAGCTAAGAGAACAAGGTTA+AGG | + | chr8.2:12468028-12468047 | MS.gene041416:CDS | 40.0% | |
| CATGATTCACTGACATCTTG+AGG | - | chr8.2:12464136-12464155 | None:intergenic | 40.0% | |
| CTAATTTGAGTGTGATTGGG+TGG | + | chr8.2:12469490-12469509 | MS.gene041416:intron | 40.0% | |
| CTATAAGCAGACTGCACATA+GGG | - | chr8.2:12464182-12464201 | None:intergenic | 40.0% | |
| CTTTCTCAGAAATGGTAAGC+AGG | + | chr8.2:12465185-12465204 | MS.gene041416:CDS | 40.0% | |
| GATTTATTGGAGAGCTTCAC+AGG | - | chr8.2:12464884-12464903 | None:intergenic | 40.0% | |
| GCACTATCTGTAGTCAATGT+GGG | + | chr8.2:12467334-12467353 | MS.gene041416:intron | 40.0% | |
| GCATAGGCTCTCTTAGATAT+AGG | + | chr8.2:12466265-12466284 | MS.gene041416:intron | 40.0% | |
| GCTGCTAATTTGAGTGTGAT+TGG | + | chr8.2:12469486-12469505 | MS.gene041416:intron | 40.0% | |
| GGAACAGGAAGAGCTAATTA+AGG | + | chr8.2:12469514-12469533 | MS.gene041416:intron | 40.0% | |
| GTCTCACATTGGTAAGCAAT+GGG | - | chr8.2:12469331-12469350 | None:intergenic | 40.0% | |
| GTGGGAACATGTTAAAGTGA+GGG | - | chr8.2:12467189-12467208 | None:intergenic | 40.0% | |
| GTTGTATATTCATCGGATCC+TGG | + | chr8.2:12468759-12468778 | MS.gene041416:intron | 40.0% | |
| TCAGTACATGTGGCAAAATC+AGG | + | chr8.2:12464717-12464736 | MS.gene041416:CDS | 40.0% | |
| TCTGTGCTGAGTCAAACTTT+GGG | + | chr8.2:12465394-12465413 | MS.gene041416:CDS | 40.0% | |
| TCTTACAGGTTGTGAGTTTC+TGG | - | chr8.2:12465251-12465270 | None:intergenic | 40.0% | |
| TGATGAAAACGATTCCATCG+AGG | + | chr8.2:12469075-12469094 | MS.gene041416:CDS | 40.0% | |
| TGGCTAGAATTATAGGGTCT+AGG | - | chr8.2:12467658-12467677 | None:intergenic | 40.0% | |
| TTGAATCATCAGTATGCAGC+TGG | + | chr8.2:12464679-12464698 | MS.gene041416:CDS | 40.0% | |
| ! | CAAAAAGGGGTCTTGTACAA+GGG | - | chr8.2:12466190-12466209 | None:intergenic | 40.0% |
| ! | TAGGGATTTGGAGTAAACTC+GGG | - | chr8.2:12464598-12464617 | None:intergenic | 40.0% |
| ! | TCTAAGATGAATGTTGGGGA+TGG | + | chr8.2:12466443-12466462 | MS.gene041416:CDS | 40.0% |
| ! | TCTAAGATGACTGTTGAGGA+TGG | + | chr8.2:12466506-12466525 | MS.gene041416:CDS | 40.0% |
| ! | TTGAAGCATGGGTTATGCAT+AGG | + | chr8.2:12467227-12467246 | MS.gene041416:intron | 40.0% |
| !! | AAGTTATTCTGAGGCATGTC+TGG | + | chr8.2:12469045-12469064 | MS.gene041416:CDS | 40.0% |
| !! | ACTCAGTGGGTTGAATTACA+TGG | - | chr8.2:12468711-12468730 | None:intergenic | 40.0% |
| !! | GGAATTAATGGGCTATGCAT+AGG | + | chr8.2:12466249-12466268 | MS.gene041416:intron | 40.0% |
| !! | GGTAAGCAATGGGTTAACAT+TGG | - | chr8.2:12469321-12469340 | None:intergenic | 40.0% |
| !!! | CAATTTTTGGTGCTGAGGAT+TGG | - | chr8.2:12465306-12465325 | None:intergenic | 40.0% |
| !!! | CATTCTTTGTTTTTCGGTGC+AGG | + | chr8.2:12464820-12464839 | MS.gene041416:intron | 40.0% |
| AACCCATGCTTCAAGCCATA+GGG | - | chr8.2:12467221-12467240 | None:intergenic | 45.0% | |
| ACAATCCTATGCTGCCACAT+TGG | + | chr8.2:12464252-12464271 | MS.gene041416:CDS | 45.0% | |
| ACATTGGGCTTCATCTATGC+AGG | + | chr8.2:12464268-12464287 | MS.gene041416:CDS | 45.0% | |
| ACCCCATTTGTAATCACCGT+GGG | + | chr8.2:12467089-12467108 | MS.gene041416:intron | 45.0% | |
| ACCGTGGGAGAAAAACACAA+GGG | + | chr8.2:12467104-12467123 | MS.gene041416:intron | 45.0% | |
| ACGTTCCTCACCTTATGAGT+CGG | - | chr8.2:12467290-12467309 | None:intergenic | 45.0% | |
| AGGAAAATCCTGCCACAGAA+AGG | - | chr8.2:12466405-12466424 | None:intergenic | 45.0% | |
| ATTTGAGTGTGATTGGGTGG+TGG | + | chr8.2:12469493-12469512 | MS.gene041416:intron | 45.0% | |
| CAATCCTATGCTGCCACATT+GGG | + | chr8.2:12464253-12464272 | MS.gene041416:CDS | 45.0% | |
| CCATGCTTCAAGCCAAAAAG+GGG | - | chr8.2:12466203-12466222 | None:intergenic | 45.0% | |
| CCCATGCTTCAAGCCAAAAA+GGG | - | chr8.2:12466204-12466223 | None:intergenic | 45.0% | |
| CTCCCACGGTGATTACAAAT+GGG | - | chr8.2:12467094-12467113 | None:intergenic | 45.0% | |
| CTGTGCTGAGTCAAACTTTG+GGG | + | chr8.2:12465395-12465414 | MS.gene041416:CDS | 45.0% | |
| GGCACTATCTGTAGTCAATG+TGG | + | chr8.2:12467333-12467352 | MS.gene041416:intron | 45.0% | |
| GGGAATCAGCTAAGAGAACA+AGG | + | chr8.2:12468022-12468041 | MS.gene041416:CDS | 45.0% | |
| GGTTAGCAGTTACTAGAGGA+TGG | + | chr8.2:12465055-12465074 | MS.gene041416:intron | 45.0% | |
| GTAAGGTCTTCCAGATGGAT+CGG | - | chr8.2:12464101-12464120 | None:intergenic | 45.0% | |
| TAACCCATGCTTCAAGCCAT+AGG | - | chr8.2:12467222-12467241 | None:intergenic | 45.0% | |
| TATAATCATCCACCTGCAGC+TGG | + | chr8.2:12464619-12464638 | MS.gene041416:CDS | 45.0% | |
| TCCCACGGTGATTACAAATG+GGG | - | chr8.2:12467093-12467112 | None:intergenic | 45.0% | |
| TCCCACTTATAAGACCCCTA+TGG | + | chr8.2:12467203-12467222 | MS.gene041416:intron | 45.0% | |
| TCTCCCACGGTGATTACAAA+TGG | - | chr8.2:12467095-12467114 | None:intergenic | 45.0% | |
| TCTTCACGTTCTTGCTGCTA+AGG | - | chr8.2:12468968-12468987 | None:intergenic | 45.0% | |
| TGCATAGATGAAGCCCAATG+TGG | - | chr8.2:12464269-12464288 | None:intergenic | 45.0% | |
| TGTGGCAGCATAGGATTGTT+TGG | - | chr8.2:12464251-12464270 | None:intergenic | 45.0% | |
| TGTTGAGGATGGTGAGAGTA+AGG | + | chr8.2:12466517-12466536 | MS.gene041416:intron | 45.0% | |
| ! | ACCCTTGTGTTTTTCTCCCA+CGG | - | chr8.2:12467108-12467127 | None:intergenic | 45.0% |
| ! | AGCCATAGGGGTCTTATAAG+TGG | - | chr8.2:12467208-12467227 | None:intergenic | 45.0% |
| ! | CCAAAAAGGGGTCTTGTACA+AGG | - | chr8.2:12466191-12466210 | None:intergenic | 45.0% |
| ! | CCTCATAAGACCGACTCATA+AGG | + | chr8.2:12467277-12467296 | MS.gene041416:intron | 45.0% |
| ! | CCTTATGAGTCGGTCTTATG+AGG | - | chr8.2:12467280-12467299 | None:intergenic | 45.0% |
| ! | CCTTGTACAAGACCCCTTTT+TGG | + | chr8.2:12466188-12466207 | MS.gene041416:intron | 45.0% |
| ! | CTTGGCTGATTCAGAGTTTG+AGG | + | chr8.2:12466692-12466711 | MS.gene041416:CDS | 45.0% |
| ! | GCCATAGGGGTCTTATAAGT+GGG | - | chr8.2:12467207-12467226 | None:intergenic | 45.0% |
| ! | TAAGACCGACTCATAAGGTG+AGG | + | chr8.2:12467282-12467301 | MS.gene041416:intron | 45.0% |
| ! | TTGAAGCATGGGCTATGCAT+AGG | + | chr8.2:12466212-12466231 | MS.gene041416:intron | 45.0% |
| !!! | CCCTTTTTGGCTTGAAGCAT+GGG | + | chr8.2:12466201-12466220 | MS.gene041416:intron | 45.0% |
| !! | ATATAAAATTGAAAAAATAA+GGG | - | chr8.2:12469117-12469136 | None:intergenic | 5.0% |
| AAGTCTGCTCTTCCACTCAG+TGG | - | chr8.2:12468725-12468744 | None:intergenic | 50.0% | |
| ACACCGACACTTCAGACTGA+GGG | - | chr8.2:12467489-12467508 | None:intergenic | 50.0% | |
| ACCCATGCTTCAAGCCATAG+GGG | - | chr8.2:12467220-12467239 | None:intergenic | 50.0% | |
| ACCCCTATGGCTTGAAGCAT+GGG | + | chr8.2:12467216-12467235 | MS.gene041416:intron | 50.0% | |
| AGTCTGCTCTTCCACTCAGT+GGG | - | chr8.2:12468724-12468743 | None:intergenic | 50.0% | |
| ATGTAAGAACCAGCTGCAGG+TGG | - | chr8.2:12464631-12464650 | None:intergenic | 50.0% | |
| ATTTCTTTAGGTGCGGGGCT+GGG | + | chr8.2:12465033-12465052 | MS.gene041416:intron | 50.0% | |
| CACCGTGGGAGAAAAACACA+AGG | + | chr8.2:12467103-12467122 | MS.gene041416:intron | 50.0% | |
| CGTGTGGCAACTGATCTTGT+AGG | + | chr8.2:12467704-12467723 | MS.gene041416:intron | 50.0% | |
| CTCATGTAAGAACCAGCTGC+AGG | - | chr8.2:12464634-12464653 | None:intergenic | 50.0% | |
| GACCCCATTTGTAATCACCG+TGG | + | chr8.2:12467088-12467107 | MS.gene041416:intron | 50.0% | |
| GAGTTTGAGGACAGTCGTCA+AGG | + | chr8.2:12466705-12466724 | MS.gene041416:CDS | 50.0% | |
| GCATAGGTTCTCGCAGACAT+TGG | + | chr8.2:12467243-12467262 | MS.gene041416:intron | 50.0% | |
| GCCCATGCTTCAAGCCAAAA+AGG | - | chr8.2:12466205-12466224 | None:intergenic | 50.0% | |
| GGTACATACTAGACCATGGC+TGG | + | chr8.2:12468056-12468075 | MS.gene041416:intron | 50.0% | |
| TACACCGACACTTCAGACTG+AGG | - | chr8.2:12467490-12467509 | None:intergenic | 50.0% | |
| TATTTCTTTAGGTGCGGGGC+TGG | + | chr8.2:12465032-12465051 | MS.gene041416:intron | 50.0% | |
| TGTTGGGGATGGTGAGAACA+AGG | + | chr8.2:12466454-12466473 | MS.gene041416:CDS | 50.0% | |
| ! | ACACCCTCAGTCTGAAGTGT+CGG | + | chr8.2:12467483-12467502 | MS.gene041416:intron | 50.0% |
| ! | CAGGTGTGTTGTTCTTGCCA+TGG | - | chr8.2:12464789-12464808 | None:intergenic | 50.0% |
| ! | CTGAGTCAAACTTTGGGGAC+AGG | + | chr8.2:12465400-12465419 | MS.gene041416:CDS | 50.0% |
| ! | CTGGGGTTAGCAGTTACTAG+AGG | + | chr8.2:12465051-12465070 | MS.gene041416:intron | 50.0% |
| ! | GCACTGACACAATACCGACT+CGG | + | chr8.2:12467430-12467449 | MS.gene041416:intron | 50.0% |
| !!! | CCCCTTTTTGGCTTGAAGCA+TGG | + | chr8.2:12466200-12466219 | MS.gene041416:intron | 50.0% |
| GAAGCCCAATGTGGCAGCAT+AGG | - | chr8.2:12464260-12464279 | None:intergenic | 55.0% | |
| GACCCCTATGGCTTGAAGCA+TGG | + | chr8.2:12467215-12467234 | MS.gene041416:intron | 55.0% | |
| TTTCTTTAGGTGCGGGGCTG+GGG | + | chr8.2:12465034-12465053 | MS.gene041416:intron | 55.0% | |
| ! | AACTTTGGGGACAGGCGTCA+AGG | + | chr8.2:12465408-12465427 | MS.gene041416:CDS | 55.0% |
| !! | GTGTGATTGGGTGGTGGAAC+AGG | + | chr8.2:12469499-12469518 | MS.gene041416:intron | 55.0% |
| CATGGCTGGTGCAATGCAGC+GGG | + | chr8.2:12468070-12468089 | MS.gene041416:intron | 60.0% | |
| CCATGGCTGGTGCAATGCAG+CGG | + | chr8.2:12468069-12468088 | MS.gene041416:intron | 60.0% | |
| CCGCTGCATTGCACCAGCCA+TGG | - | chr8.2:12468072-12468091 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 12464082 | 12469589 | 12464082 | ID=MS.gene041416 |
| chr8.2 | mRNA | 12464082 | 12469589 | 12464082 | ID=MS.gene041416.t1;Parent=MS.gene041416 |
| chr8.2 | exon | 12464082 | 12464141 | 12464082 | ID=MS.gene041416.t1.exon1;Parent=MS.gene041416.t1 |
| chr8.2 | CDS | 12464082 | 12464141 | 12464082 | ID=cds.MS.gene041416.t1;Parent=MS.gene041416.t1 |
| chr8.2 | exon | 12464239 | 12464289 | 12464239 | ID=MS.gene041416.t1.exon2;Parent=MS.gene041416.t1 |
| chr8.2 | CDS | 12464239 | 12464289 | 12464239 | ID=cds.MS.gene041416.t1;Parent=MS.gene041416.t1 |
| chr8.2 | exon | 12464583 | 12464738 | 12464583 | ID=MS.gene041416.t1.exon3;Parent=MS.gene041416.t1 |
| chr8.2 | CDS | 12464583 | 12464738 | 12464583 | ID=cds.MS.gene041416.t1;Parent=MS.gene041416.t1 |
| chr8.2 | exon | 12464842 | 12464916 | 12464842 | ID=MS.gene041416.t1.exon4;Parent=MS.gene041416.t1 |
| chr8.2 | CDS | 12464842 | 12464916 | 12464842 | ID=cds.MS.gene041416.t1;Parent=MS.gene041416.t1 |
| chr8.2 | exon | 12465172 | 12465462 | 12465172 | ID=MS.gene041416.t1.exon5;Parent=MS.gene041416.t1 |
| chr8.2 | CDS | 12465172 | 12465462 | 12465172 | ID=cds.MS.gene041416.t1;Parent=MS.gene041416.t1 |
| chr8.2 | exon | 12466416 | 12466527 | 12466416 | ID=MS.gene041416.t1.exon6;Parent=MS.gene041416.t1 |
| chr8.2 | CDS | 12466416 | 12466527 | 12466416 | ID=cds.MS.gene041416.t1;Parent=MS.gene041416.t1 |
| chr8.2 | exon | 12466683 | 12466771 | 12466683 | ID=MS.gene041416.t1.exon7;Parent=MS.gene041416.t1 |
| chr8.2 | CDS | 12466683 | 12466771 | 12466683 | ID=cds.MS.gene041416.t1;Parent=MS.gene041416.t1 |
| chr8.2 | exon | 12467979 | 12468056 | 12467979 | ID=MS.gene041416.t1.exon8;Parent=MS.gene041416.t1 |
| chr8.2 | CDS | 12467979 | 12468056 | 12467979 | ID=cds.MS.gene041416.t1;Parent=MS.gene041416.t1 |
| chr8.2 | exon | 12468971 | 12469096 | 12468971 | ID=MS.gene041416.t1.exon9;Parent=MS.gene041416.t1 |
| chr8.2 | CDS | 12468971 | 12469096 | 12468971 | ID=cds.MS.gene041416.t1;Parent=MS.gene041416.t1 |
| chr8.2 | exon | 12469521 | 12469589 | 12469521 | ID=MS.gene041416.t1.exon10;Parent=MS.gene041416.t1 |
| chr8.2 | CDS | 12469521 | 12469589 | 12469521 | ID=cds.MS.gene041416.t1;Parent=MS.gene041416.t1 |
| Gene Sequence |
| Protein sequence |
