Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041532.t1 | XP_024625265.1 | 70.2 | 766 | 40 | 3 | 1 | 578 | 1 | 766 | 1.70E-288 | 1001.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041532.t1 | Q9SZL8 | 28.1 | 670 | 345 | 13 | 23 | 562 | 60 | 722 | 1.7e-68 | 261.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041532.t1 | A0A3Q7Y261 | 64.5 | 673 | 114 | 3 | 1 | 551 | 1 | 670 | 2.2e-234 | 821.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene041532.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041532.t1 | MTR_0402s0040 | 74.000 | 200 | 51 | 1 | 12 | 211 | 2 | 200 | 4.31e-96 | 303 |
MS.gene041532.t1 | MTR_0402s0040 | 43.802 | 242 | 67 | 3 | 393 | 602 | 286 | 490 | 9.16e-51 | 183 |
MS.gene041532.t1 | MTR_7g113010 | 67.702 | 161 | 36 | 2 | 1 | 161 | 424 | 568 | 4.01e-58 | 205 |
MS.gene041532.t1 | MTR_6g017200 | 73.643 | 129 | 33 | 1 | 4 | 131 | 25 | 153 | 1.11e-57 | 191 |
MS.gene041532.t1 | MTR_1g057920 | 76.800 | 125 | 27 | 1 | 1 | 125 | 1 | 123 | 4.64e-57 | 188 |
MS.gene041532.t1 | MTR_5g015480 | 65.584 | 154 | 49 | 1 | 12 | 165 | 36 | 185 | 6.76e-56 | 190 |
MS.gene041532.t1 | MTR_2g070590 | 70.833 | 120 | 35 | 0 | 20 | 139 | 1 | 120 | 5.06e-52 | 174 |
MS.gene041532.t1 | MTR_6g051425 | 30.897 | 301 | 182 | 7 | 38 | 317 | 19 | 314 | 5.92e-44 | 160 |
MS.gene041532.t1 | MTR_0558s0020 | 32.685 | 257 | 154 | 4 | 40 | 277 | 40 | 296 | 1.97e-41 | 152 |
MS.gene041532.t1 | MTR_8g446020 | 36.782 | 174 | 109 | 1 | 105 | 277 | 83 | 256 | 1.54e-33 | 129 |
MS.gene041532.t1 | MTR_0137s0040 | 58.654 | 104 | 43 | 0 | 1 | 104 | 1 | 104 | 5.55e-33 | 122 |
MS.gene041532.t1 | MTR_6g090505 | 34.123 | 211 | 124 | 3 | 81 | 276 | 20 | 230 | 7.01e-33 | 130 |
MS.gene041532.t1 | MTR_1g070355 | 32.787 | 244 | 150 | 7 | 36 | 271 | 72 | 309 | 2.53e-31 | 129 |
MS.gene041532.t1 | MTR_1g083640 | 29.386 | 228 | 142 | 4 | 40 | 248 | 55 | 282 | 5.10e-28 | 114 |
MS.gene041532.t1 | MTR_4g035820 | 31.206 | 282 | 178 | 9 | 9 | 281 | 50 | 324 | 5.85e-28 | 119 |
MS.gene041532.t1 | MTR_7g074790 | 40.000 | 180 | 86 | 4 | 33 | 211 | 7 | 165 | 4.06e-26 | 107 |
MS.gene041532.t1 | MTR_1g050985 | 78.333 | 60 | 13 | 0 | 106 | 165 | 39 | 98 | 9.46e-26 | 102 |
MS.gene041532.t1 | MTR_0291s0060 | 66.216 | 74 | 25 | 0 | 13 | 86 | 12 | 85 | 1.71e-24 | 98.2 |
MS.gene041532.t1 | MTR_4g102720 | 33.140 | 172 | 79 | 3 | 33 | 204 | 4 | 139 | 4.23e-23 | 98.6 |
MS.gene041532.t1 | MTR_5g039760 | 34.804 | 204 | 103 | 6 | 32 | 232 | 6 | 182 | 2.39e-21 | 92.4 |
MS.gene041532.t1 | MTR_7g446520 | 29.752 | 242 | 152 | 4 | 42 | 282 | 94 | 318 | 6.82e-21 | 94.7 |
MS.gene041532.t1 | MTR_7g061980 | 42.017 | 119 | 65 | 3 | 30 | 147 | 4 | 119 | 2.16e-20 | 87.4 |
MS.gene041532.t1 | MTR_7g446480 | 35.227 | 176 | 111 | 2 | 112 | 285 | 140 | 314 | 3.85e-20 | 92.0 |
MS.gene041532.t1 | MTR_5g076070 | 27.074 | 229 | 157 | 6 | 42 | 265 | 59 | 282 | 1.92e-19 | 89.4 |
MS.gene041532.t1 | MTR_7g446510 | 34.659 | 176 | 112 | 2 | 112 | 285 | 155 | 329 | 3.85e-19 | 89.4 |
MS.gene041532.t1 | MTR_0337s0040 | 28.902 | 173 | 110 | 3 | 82 | 242 | 51 | 222 | 4.46e-19 | 87.0 |
MS.gene041532.t1 | MTR_1g019850 | 33.742 | 163 | 101 | 2 | 7 | 169 | 41 | 196 | 7.32e-17 | 80.9 |
MS.gene041532.t1 | MTR_1g091013 | 55.128 | 78 | 24 | 1 | 27 | 104 | 3 | 69 | 8.60e-17 | 75.5 |
MS.gene041532.t1 | MTR_4g067290 | 42.593 | 108 | 56 | 3 | 35 | 140 | 55 | 158 | 9.36e-17 | 80.5 |
MS.gene041532.t1 | MTR_4g067290 | 42.593 | 108 | 56 | 3 | 35 | 140 | 55 | 158 | 9.83e-17 | 80.5 |
MS.gene041532.t1 | MTR_4g067290 | 42.593 | 108 | 56 | 3 | 35 | 140 | 75 | 178 | 1.45e-16 | 80.1 |
MS.gene041532.t1 | MTR_4g067290 | 42.593 | 108 | 56 | 3 | 35 | 140 | 75 | 178 | 1.55e-16 | 80.1 |
MS.gene041532.t1 | MTR_4g067290 | 42.593 | 108 | 56 | 3 | 35 | 140 | 73 | 176 | 1.59e-16 | 80.1 |
MS.gene041532.t1 | MTR_4g067290 | 42.593 | 108 | 56 | 3 | 35 | 140 | 115 | 218 | 2.07e-16 | 80.5 |
MS.gene041532.t1 | MTR_1g008290 | 33.566 | 143 | 90 | 3 | 89 | 230 | 3 | 141 | 3.97e-16 | 76.3 |
MS.gene041532.t1 | MTR_2g014100 | 24.623 | 199 | 130 | 3 | 40 | 219 | 48 | 245 | 6.50e-16 | 78.2 |
MS.gene041532.t1 | MTR_2g098920 | 39.815 | 108 | 59 | 3 | 35 | 140 | 79 | 182 | 6.84e-16 | 78.6 |
MS.gene041532.t1 | MTR_1g086270 | 83.333 | 36 | 6 | 0 | 331 | 366 | 1 | 36 | 2.76e-15 | 72.4 |
MS.gene041532.t1 | MTR_3g006370 | 39.048 | 105 | 62 | 2 | 35 | 138 | 49 | 152 | 4.47e-14 | 72.4 |
MS.gene041532.t1 | MTR_5g045210 | 39.326 | 89 | 54 | 0 | 446 | 534 | 20 | 108 | 1.74e-13 | 70.1 |
MS.gene041532.t1 | MTR_3g450850 | 24.194 | 248 | 174 | 6 | 41 | 276 | 52 | 297 | 6.45e-13 | 70.9 |
MS.gene041532.t1 | MTR_1g055240 | 30.769 | 117 | 81 | 0 | 104 | 220 | 33 | 149 | 4.99e-12 | 64.7 |
MS.gene041532.t1 | MTR_6g022080 | 26.582 | 158 | 113 | 2 | 42 | 197 | 91 | 247 | 5.83e-12 | 66.6 |
MS.gene041532.t1 | MTR_2g098880 | 33.858 | 127 | 77 | 4 | 22 | 142 | 44 | 169 | 1.35e-11 | 65.5 |
MS.gene041532.t1 | MTR_2g098880 | 33.858 | 127 | 77 | 4 | 22 | 142 | 56 | 181 | 1.43e-11 | 65.9 |
MS.gene041532.t1 | MTR_2g099430 | 38.202 | 89 | 53 | 1 | 59 | 147 | 26 | 112 | 2.25e-11 | 61.6 |
MS.gene041532.t1 | MTR_3g008240 | 25.153 | 163 | 104 | 3 | 40 | 184 | 40 | 202 | 2.25e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041532.t1 | AT4G38180 | 36.559 | 372 | 226 | 6 | 23 | 389 | 60 | 426 | 5.56e-75 | 255 |
MS.gene041532.t1 | AT4G15090 | 32.544 | 338 | 224 | 4 | 33 | 368 | 48 | 383 | 1.06e-56 | 205 |
MS.gene041532.t1 | AT4G15090 | 32.544 | 338 | 224 | 4 | 33 | 368 | 48 | 383 | 1.06e-56 | 205 |
MS.gene041532.t1 | AT4G15090 | 32.544 | 338 | 224 | 4 | 33 | 368 | 48 | 383 | 1.06e-56 | 205 |
MS.gene041532.t1 | AT4G15090 | 32.544 | 338 | 224 | 4 | 33 | 368 | 48 | 383 | 1.06e-56 | 205 |
MS.gene041532.t1 | AT4G15090 | 32.544 | 338 | 224 | 4 | 33 | 368 | 48 | 383 | 1.06e-56 | 205 |
MS.gene041532.t1 | AT1G10240 | 32.326 | 331 | 213 | 7 | 29 | 351 | 41 | 368 | 8.31e-51 | 186 |
MS.gene041532.t1 | AT1G10240 | 32.326 | 331 | 213 | 7 | 29 | 351 | 41 | 368 | 8.31e-51 | 186 |
MS.gene041532.t1 | AT1G76320 | 33.025 | 324 | 204 | 6 | 40 | 361 | 1 | 313 | 2.75e-50 | 185 |
MS.gene041532.t1 | AT1G76320 | 33.025 | 324 | 204 | 6 | 40 | 361 | 1 | 313 | 4.42e-50 | 185 |
MS.gene041532.t1 | AT1G76320 | 33.025 | 324 | 204 | 6 | 40 | 361 | 1 | 313 | 4.42e-50 | 185 |
MS.gene041532.t1 | AT1G76320 | 33.025 | 324 | 204 | 6 | 40 | 361 | 1 | 313 | 4.78e-50 | 185 |
MS.gene041532.t1 | AT3G22170 | 28.643 | 398 | 242 | 10 | 33 | 414 | 67 | 438 | 5.12e-46 | 174 |
MS.gene041532.t1 | AT3G22170 | 36.036 | 111 | 65 | 2 | 404 | 514 | 553 | 657 | 3.64e-13 | 73.2 |
MS.gene041532.t1 | AT3G22170 | 28.643 | 398 | 242 | 10 | 33 | 414 | 67 | 438 | 5.12e-46 | 174 |
MS.gene041532.t1 | AT3G22170 | 36.036 | 111 | 65 | 2 | 404 | 514 | 553 | 657 | 3.64e-13 | 73.2 |
MS.gene041532.t1 | AT3G06250 | 29.969 | 327 | 188 | 6 | 27 | 352 | 181 | 467 | 1.50e-41 | 160 |
MS.gene041532.t1 | AT3G06250 | 29.969 | 327 | 188 | 6 | 27 | 352 | 181 | 467 | 1.50e-41 | 160 |
MS.gene041532.t1 | AT3G06250 | 29.969 | 327 | 188 | 6 | 27 | 352 | 181 | 467 | 1.50e-41 | 160 |
MS.gene041532.t1 | AT2G27110 | 29.600 | 375 | 226 | 9 | 28 | 399 | 41 | 380 | 4.58e-41 | 160 |
MS.gene041532.t1 | AT2G27110 | 33.113 | 151 | 92 | 5 | 383 | 527 | 488 | 635 | 5.64e-13 | 72.8 |
MS.gene041532.t1 | AT2G27110 | 29.600 | 375 | 226 | 9 | 28 | 399 | 41 | 380 | 4.58e-41 | 160 |
MS.gene041532.t1 | AT2G27110 | 33.113 | 151 | 92 | 5 | 383 | 527 | 488 | 635 | 5.64e-13 | 72.8 |
MS.gene041532.t1 | AT5G28530 | 28.313 | 332 | 219 | 7 | 36 | 351 | 55 | 383 | 1.35e-39 | 154 |
MS.gene041532.t1 | AT5G28530 | 28.313 | 332 | 219 | 7 | 36 | 351 | 55 | 383 | 1.51e-39 | 154 |
MS.gene041532.t1 | AT5G28530 | 28.313 | 332 | 219 | 7 | 36 | 351 | 55 | 383 | 1.51e-39 | 154 |
MS.gene041532.t1 | AT2G32250 | 29.524 | 315 | 173 | 8 | 40 | 351 | 42 | 310 | 7.56e-39 | 153 |
MS.gene041532.t1 | AT2G32250 | 29.524 | 315 | 173 | 8 | 40 | 351 | 42 | 310 | 8.98e-39 | 153 |
MS.gene041532.t1 | AT2G32250 | 29.524 | 315 | 173 | 8 | 40 | 351 | 42 | 310 | 8.98e-39 | 153 |
MS.gene041532.t1 | AT2G32250 | 29.524 | 315 | 173 | 8 | 40 | 351 | 1 | 269 | 9.52e-39 | 152 |
MS.gene041532.t1 | AT2G32250 | 29.524 | 315 | 173 | 8 | 40 | 351 | 1 | 269 | 9.80e-39 | 152 |
MS.gene041532.t1 | AT2G32250 | 29.524 | 315 | 173 | 8 | 40 | 351 | 42 | 310 | 1.01e-38 | 152 |
MS.gene041532.t1 | AT2G32250 | 29.524 | 315 | 173 | 8 | 40 | 351 | 42 | 310 | 1.01e-38 | 152 |
MS.gene041532.t1 | AT2G32250 | 29.524 | 315 | 173 | 8 | 40 | 351 | 42 | 310 | 1.01e-38 | 152 |
MS.gene041532.t1 | AT5G18960 | 29.664 | 327 | 190 | 8 | 29 | 353 | 204 | 492 | 2.94e-38 | 151 |
MS.gene041532.t1 | AT5G18960 | 33.600 | 125 | 65 | 3 | 17 | 141 | 28 | 134 | 6.18e-12 | 69.3 |
MS.gene041532.t1 | AT5G18960 | 30.075 | 133 | 88 | 3 | 384 | 511 | 638 | 770 | 7.04e-11 | 65.9 |
MS.gene041532.t1 | AT5G18960 | 29.664 | 327 | 190 | 8 | 29 | 353 | 204 | 492 | 2.94e-38 | 151 |
MS.gene041532.t1 | AT5G18960 | 33.600 | 125 | 65 | 3 | 17 | 141 | 28 | 134 | 6.18e-12 | 69.3 |
MS.gene041532.t1 | AT5G18960 | 30.075 | 133 | 88 | 3 | 384 | 511 | 638 | 770 | 7.04e-11 | 65.9 |
MS.gene041532.t1 | AT1G80010 | 27.877 | 391 | 243 | 11 | 21 | 390 | 80 | 452 | 2.16e-33 | 136 |
MS.gene041532.t1 | AT1G52520 | 30.275 | 327 | 193 | 10 | 36 | 351 | 85 | 387 | 2.64e-33 | 135 |
MS.gene041532.t1 | AT2G27110 | 36.559 | 186 | 112 | 3 | 215 | 399 | 55 | 235 | 1.77e-31 | 130 |
MS.gene041532.t1 | AT2G27110 | 33.113 | 151 | 92 | 5 | 383 | 527 | 343 | 490 | 5.56e-13 | 72.4 |
MS.gene041532.t1 | AT4G19990 | 28.793 | 323 | 178 | 7 | 42 | 349 | 27 | 312 | 6.25e-30 | 125 |
MS.gene041532.t1 | AT4G19990 | 28.793 | 323 | 178 | 7 | 42 | 349 | 27 | 312 | 6.25e-30 | 125 |
MS.gene041532.t1 | AT4G19990 | 28.793 | 323 | 178 | 7 | 42 | 349 | 27 | 312 | 6.76e-30 | 125 |
MS.gene041532.t1 | AT4G19990 | 28.793 | 323 | 178 | 7 | 42 | 349 | 27 | 312 | 6.90e-30 | 125 |
MS.gene041532.t1 | AT4G19990 | 28.793 | 323 | 178 | 7 | 42 | 349 | 27 | 312 | 6.90e-30 | 125 |
MS.gene041532.t1 | AT4G19990 | 28.793 | 323 | 178 | 7 | 42 | 349 | 41 | 326 | 7.04e-30 | 125 |
MS.gene041532.t1 | AT4G38170 | 36.879 | 141 | 83 | 3 | 204 | 342 | 10 | 146 | 9.81e-25 | 108 |
MS.gene041532.t1 | AT4G19990 | 27.931 | 290 | 157 | 7 | 75 | 349 | 3 | 255 | 1.98e-22 | 102 |
MS.gene041532.t1 | AT5G28530 | 23.913 | 322 | 183 | 9 | 36 | 351 | 55 | 320 | 2.62e-20 | 95.5 |
MS.gene041532.t1 | AT5G28530 | 23.913 | 322 | 183 | 9 | 36 | 351 | 55 | 320 | 2.71e-20 | 95.5 |
MS.gene041532.t1 | AT2G43280 | 38.889 | 126 | 72 | 4 | 34 | 155 | 20 | 144 | 1.93e-16 | 79.0 |
MS.gene041532.t1 | AT3G59470 | 36.620 | 142 | 78 | 4 | 9 | 140 | 33 | 172 | 9.65e-16 | 77.8 |
MS.gene041532.t1 | AT3G59470 | 36.620 | 142 | 78 | 4 | 9 | 140 | 33 | 172 | 9.65e-16 | 77.8 |
MS.gene041532.t1 | AT3G59470 | 36.620 | 142 | 78 | 4 | 9 | 140 | 45 | 184 | 1.26e-15 | 77.8 |
MS.gene041532.t1 | AT4G12850 | 36.508 | 126 | 73 | 3 | 36 | 161 | 11 | 129 | 2.04e-14 | 71.2 |
MS.gene041532.t1 | AT4G12850 | 39.048 | 105 | 60 | 2 | 35 | 139 | 10 | 110 | 1.63e-13 | 68.6 |
MS.gene041532.t1 | AT4G12850 | 38.095 | 105 | 61 | 2 | 35 | 139 | 10 | 110 | 4.68e-13 | 68.6 |
MS.gene041532.t1 | AT2G43280 | 38.000 | 100 | 58 | 3 | 51 | 147 | 2 | 100 | 8.95e-13 | 67.4 |
MS.gene041532.t1 | AT3G07500 | 38.318 | 107 | 65 | 1 | 34 | 140 | 31 | 136 | 2.26e-12 | 67.4 |
Find 117 sgRNAs with CRISPR-Local
Find 169 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGCAAATAACAAACATATTT+TGG | 0.063618 | 8.2:+11100554 | MS.gene041532:CDS |
AGACAATTCTGTTGATAAAT+TGG | 0.199895 | 8.2:+11099865 | MS.gene041532:CDS |
CATGAATCCGTCGTCTATTT+TGG | 0.206115 | 8.2:+11099841 | None:intergenic |
GCACAAATGATCAATGATTA+TGG | 0.212099 | 8.2:+11100583 | MS.gene041532:CDS |
CATTTCATGGATTGTGTACT+TGG | 0.244889 | 8.2:+11100866 | MS.gene041532:CDS |
TTTGGTATTCGTCGAGAATA+TGG | 0.265133 | 8.2:+11100022 | MS.gene041532:CDS |
ATGTCCTCCAATGATTAAAT+TGG | 0.279912 | 8.2:+11101695 | MS.gene041532:CDS |
ATATATTCATGCAAATCTTT+TGG | 0.296908 | 8.2:-11100352 | None:intergenic |
CACTGTACCGCTTCATGAAA+TGG | 0.307019 | 8.2:-11101668 | None:intergenic |
ACAAGCATCACAAATTATAA+TGG | 0.308529 | 8.2:+11100309 | MS.gene041532:CDS |
AGAATTTGCTTCGAACAAAA+AGG | 0.321129 | 8.2:+11100428 | MS.gene041532:CDS |
CGCTTTAGTATATAGTGTTC+AGG | 0.332129 | 8.2:-11101573 | None:intergenic |
AATGAGTATAGTAAAAGAAT+TGG | 0.336174 | 8.2:+11099998 | MS.gene041532:CDS |
ATTTCACTTGATCGAAAGAT+AGG | 0.345588 | 8.2:+11100187 | MS.gene041532:CDS |
GTTATGTCGGAGACATTTCA+TGG | 0.359089 | 8.2:+11100853 | MS.gene041532:CDS |
CTGTTGGCCAATTTAATCAT+TGG | 0.359632 | 8.2:-11101702 | None:intergenic |
ATTATAATGGGAGATGAATC+TGG | 0.362761 | 8.2:+11100322 | MS.gene041532:CDS |
CGGCCGTTGGGAGTATTTGT+TGG | 0.367992 | 8.2:+11100661 | MS.gene041532:CDS |
CACCGCATACAAGACAAATA+AGG | 0.371786 | 8.2:+11100633 | MS.gene041532:CDS |
CTTCGCTTGATTGTGTCCCT+TGG | 0.383017 | 8.2:-11102245 | None:intergenic |
ATATAAGACAAAACGCTCTA+AGG | 0.384570 | 8.2:+11100890 | MS.gene041532:CDS |
TTTGTCTTCATTGTGCCCCT+TGG | 0.391077 | 8.2:-11102299 | None:intergenic |
TATAGTAAAAGAATTGGATT+TGG | 0.393932 | 8.2:+11100004 | MS.gene041532:CDS |
GATATTCCTCGTATTCCTCT+TGG | 0.399365 | 8.2:-11101359 | None:intergenic |
GCTGGACTCTTCATAAACTT+TGG | 0.408472 | 8.2:-11101760 | None:intergenic |
AGAATCAAGTGGAATGGTTC+AGG | 0.410213 | 8.2:+11101824 | MS.gene041532:CDS |
CTCAATTCAATTACTCTCAA+TGG | 0.424494 | 8.2:+11102147 | MS.gene041532:CDS |
TGTAAAAGAGAGGACAGTTA+TGG | 0.424574 | 8.2:+11101440 | MS.gene041532:CDS |
CAAGCATCACAAATTATAAT+GGG | 0.429280 | 8.2:+11100310 | MS.gene041532:CDS |
CAATCAAGCGAAGTTGATAA+TGG | 0.430767 | 8.2:+11102255 | MS.gene041532:CDS |
ATCATGTGAACATACTCTTC+CGG | 0.437349 | 8.2:-11100259 | None:intergenic |
CATCATCAAGCTTCAATTCA+AGG | 0.437452 | 8.2:+11102174 | MS.gene041532:CDS |
GGGTGTAAGCATTTCCGGCT+TGG | 0.443877 | 8.2:-11101318 | None:intergenic |
ACAAGACAAATAAGGGTTAT+CGG | 0.444223 | 8.2:+11100641 | MS.gene041532:CDS |
TGCATAAAGGTGTTGAAAGA+AGG | 0.445593 | 8.2:+11101390 | MS.gene041532:CDS |
CTCTATCCCACCAACCTGCT+TGG | 0.449496 | 8.2:-11100377 | None:intergenic |
GACAAAAGACGTCAACCGAC+TGG | 0.454042 | 8.2:+11100118 | MS.gene041532:CDS |
ACCGCATACAAGACAAATAA+GGG | 0.454406 | 8.2:+11100634 | MS.gene041532:CDS |
GTAAAAGAGAGGACAGTTAT+GGG | 0.455513 | 8.2:+11101441 | MS.gene041532:CDS |
GGTTGGGAAGTAATCAAGAT+TGG | 0.457422 | 8.2:+11101613 | MS.gene041532:CDS |
TCAAATAACCACTGAAAAGA+AGG | 0.457713 | 8.2:-11100745 | None:intergenic |
CACAAATGATCAATGATTAT+GGG | 0.462910 | 8.2:+11100584 | MS.gene041532:CDS |
TGAAAGTCATAAAAGAAAGA+TGG | 0.464163 | 8.2:-11100517 | None:intergenic |
ACTGTACCGCTTCATGAAAT+GGG | 0.469454 | 8.2:-11101667 | None:intergenic |
AGCATCTTGATCCGTTAGAA+TGG | 0.469910 | 8.2:-11100806 | None:intergenic |
AACCGGGTGTAATGCACGTA+TGG | 0.472531 | 8.2:+11100162 | MS.gene041532:CDS |
ATATCAAGACACTTGCATAA+AGG | 0.478993 | 8.2:+11101377 | MS.gene041532:CDS |
ATCAATGATTATGGGTACTT+TGG | 0.481641 | 8.2:+11100592 | MS.gene041532:CDS |
AATAAGGGTTATCGGCCGTT+GGG | 0.489965 | 8.2:+11100649 | MS.gene041532:CDS |
CATTGAGAGTAATTGAATTG+AGG | 0.493852 | 8.2:-11102146 | None:intergenic |
TTGGTATTCGTCGAGAATAT+GGG | 0.496079 | 8.2:+11100023 | MS.gene041532:CDS |
TGGACAAGAGAGGCAAGGTT+GGG | 0.506606 | 8.2:+11101597 | MS.gene041532:CDS |
GGGTATTTCTTTAGTTATGT+CGG | 0.507658 | 8.2:+11100840 | MS.gene041532:CDS |
TCTACGGCAGAAACTAGAAC+CGG | 0.508196 | 8.2:+11100145 | MS.gene041532:CDS |
CAAAATAGTTGAAGATATGT+TGG | 0.512003 | 8.2:+11101782 | MS.gene041532:CDS |
ATGAGATTCTGAAGCTCTGT+TGG | 0.513891 | 8.2:-11101718 | None:intergenic |
CATACTCTTCCGGCTGAAGA+AGG | 0.514601 | 8.2:-11100249 | None:intergenic |
TTGGCCAATTTAATCATTGG+AGG | 0.515834 | 8.2:-11101699 | None:intergenic |
CAATGTCAAGCTACAATCCA+AGG | 0.517257 | 8.2:+11102282 | MS.gene041532:CDS |
TTGTTGGACTTAATAATCAT+CGG | 0.518157 | 8.2:+11100677 | MS.gene041532:CDS |
CTATGTCAAACTGCAATCCA+AGG | 0.518552 | 8.2:+11102228 | MS.gene041532:CDS |
ATGGACAAGAGAGGCAAGGT+TGG | 0.520495 | 8.2:+11101596 | MS.gene041532:CDS |
GTTGGTGGGATAGAGATGGT+TGG | 0.521078 | 8.2:+11100385 | MS.gene041532:CDS |
AAATAAGGGTTATCGGCCGT+TGG | 0.523633 | 8.2:+11100648 | MS.gene041532:CDS |
CAAGATGCTGCGATGGCAAA+GGG | 0.528327 | 8.2:+11100820 | MS.gene041532:CDS |
GAAGTAATCAAGATTGGAAA+GGG | 0.535116 | 8.2:+11101619 | MS.gene041532:CDS |
TGCCGACATCAAACCTCACT+TGG | 0.536773 | 8.2:+11099934 | MS.gene041532:CDS |
CAATATTCTTGAACAAAATG+AGG | 0.537039 | 8.2:+11099892 | MS.gene041532:CDS |
ACCCTTATTTGTCTTGTATG+CGG | 0.547780 | 8.2:-11100635 | None:intergenic |
ACAAAAGACGTCAACCGACT+GGG | 0.550284 | 8.2:+11100119 | MS.gene041532:CDS |
TCAAGATGCTGCGATGGCAA+AGG | 0.551791 | 8.2:+11100819 | MS.gene041532:CDS |
CTCTCATCGTCGCATATCTG+AGG | 0.552258 | 8.2:+11100285 | MS.gene041532:CDS |
GCATGAATATATGTCCAAGC+AGG | 0.557373 | 8.2:+11100363 | MS.gene041532:CDS |
TAGTCATGCTTTGAAAGTGT+TGG | 0.559284 | 8.2:+11101527 | MS.gene041532:CDS |
GTAATTGAATTGAGGTCAAG+TGG | 0.560596 | 8.2:-11102138 | None:intergenic |
TCACTAAAGTATAGTGAAGT+GGG | 0.565356 | 8.2:+11100457 | MS.gene041532:CDS |
TTTCACTTGATCGAAAGATA+GGG | 0.567868 | 8.2:+11100188 | MS.gene041532:CDS |
AACACTATATACTAAAGCGA+TGG | 0.568133 | 8.2:+11101577 | MS.gene041532:CDS |
TCAACCGACTGGGGAGTCTA+CGG | 0.568520 | 8.2:+11100129 | MS.gene041532:CDS |
GCTCGAATGCTCGTCCAAGC+CGG | 0.569311 | 8.2:+11101304 | MS.gene041532:CDS |
CTCACTAAAGTATAGTGAAG+TGG | 0.570601 | 8.2:+11100456 | MS.gene041532:CDS |
GGAAGTAATCAAGATTGGAA+AGG | 0.571376 | 8.2:+11101618 | MS.gene041532:CDS |
TATATGTCCAAGCAGGTTGG+TGG | 0.571492 | 8.2:+11100370 | MS.gene041532:CDS |
GACAGTTATGGGAAATCCTA+CGG | 0.576210 | 8.2:+11101452 | MS.gene041532:CDS |
ACACAACCACCTTCTTCAGC+CGG | 0.580649 | 8.2:+11100240 | MS.gene041532:CDS |
ATCATCAAGCTTCAATTCAA+GGG | 0.586404 | 8.2:+11102175 | MS.gene041532:CDS |
AACGGATCAAGATGCTGCGA+TGG | 0.589430 | 8.2:+11100813 | MS.gene041532:CDS |
AGATTCACATGCTACAAAGA+AGG | 0.592653 | 8.2:+11100082 | MS.gene041532:CDS |
CTTGAACAAAATGAGGAACA+TGG | 0.594103 | 8.2:+11099899 | MS.gene041532:CDS |
AAAGCCTAAAACCATTCTAA+CGG | 0.600846 | 8.2:+11100795 | MS.gene041532:CDS |
ACCGGGTGTAATGCACGTAT+GGG | 0.604247 | 8.2:+11100163 | MS.gene041532:CDS |
GGATATGATATTTGAATCCG+AGG | 0.604669 | 8.2:+11099955 | MS.gene041532:CDS |
TCAAATATCATATCCAAGTG+AGG | 0.605178 | 8.2:-11099947 | None:intergenic |
TGAAATCCCATTTCATGAAG+CGG | 0.605325 | 8.2:+11101661 | MS.gene041532:CDS |
ACCCATACGTGCATTACACC+CGG | 0.613296 | 8.2:-11100164 | None:intergenic |
GAATATATGTCCAAGCAGGT+TGG | 0.614674 | 8.2:+11100367 | MS.gene041532:CDS |
ATATGTCCAAGCAGGTTGGT+GGG | 0.619945 | 8.2:+11100371 | MS.gene041532:CDS |
GCAGGTTGGTGGGATAGAGA+TGG | 0.629905 | 8.2:+11100381 | MS.gene041532:CDS |
AATGTCAAGCTACAATCCAA+GGG | 0.633905 | 8.2:+11102283 | MS.gene041532:CDS |
ACTCTTCCGGCTGAAGAAGG+TGG | 0.641594 | 8.2:-11100246 | None:intergenic |
TCGAAAGATAGGGAAATACA+AGG | 0.644061 | 8.2:+11100198 | MS.gene041532:CDS |
CTACGGCAGAAACTAGAACC+GGG | 0.648731 | 8.2:+11100146 | MS.gene041532:CDS |
AGCGATGGACAAGAGAGGCA+AGG | 0.649888 | 8.2:+11101592 | MS.gene041532:CDS |
ATTATGATAATGTAAAAGAG+AGG | 0.650123 | 8.2:+11101430 | MS.gene041532:CDS |
TATGTCAAACTGCAATCCAA+GGG | 0.654427 | 8.2:+11102229 | MS.gene041532:CDS |
AGTCCAACAAATACTCCCAA+CGG | 0.659244 | 8.2:-11100664 | None:intergenic |
GGATGGAGAATCAAGTGGAA+TGG | 0.662094 | 8.2:+11101818 | MS.gene041532:CDS |
ATCCAAGTGAGGTTTGATGT+CGG | 0.662311 | 8.2:-11099936 | None:intergenic |
TCTGCCGTAGACTCCCCAGT+CGG | 0.665919 | 8.2:-11100133 | None:intergenic |
CAAAAGACGTCAACCGACTG+GGG | 0.676456 | 8.2:+11100120 | MS.gene041532:CDS |
TGTGTGGATGGAGAATCAAG+TGG | 0.678307 | 8.2:+11101813 | MS.gene041532:CDS |
ACTAAAGCGATGGACAAGAG+AGG | 0.678959 | 8.2:+11101587 | MS.gene041532:CDS |
GGAATTCCAAGAGGAATACG+AGG | 0.680926 | 8.2:+11101353 | MS.gene041532:CDS |
AAATTCATAAGCATCTACCT+CGG | 0.685544 | 8.2:-11099972 | None:intergenic |
TTGTCTACCAAAATAGACGA+CGG | 0.691097 | 8.2:-11099848 | None:intergenic |
AAATATTGAGGAATTCCAAG+AGG | 0.705411 | 8.2:+11101344 | MS.gene041532:CDS |
ATGTCAAGCTACAATCCAAG+GGG | 0.727067 | 8.2:+11102284 | MS.gene041532:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATGAGTATAGTAAAAGAAT+TGG | + | chr8.2:11099998-11100017 | MS.gene041532:CDS | 20.0% |
!! | TATAGTAAAAGAATTGGATT+TGG | + | chr8.2:11100004-11100023 | MS.gene041532:CDS | 20.0% |
!! | TATTTAAATCTGACTTCAAA+TGG | - | chr8.2:11101174-11101193 | None:intergenic | 20.0% |
!!! | AGCAAATAACAAACATATTT+TGG | + | chr8.2:11100554-11100573 | MS.gene041532:CDS | 20.0% |
!!! | ATATATTCATGCAAATCTTT+TGG | - | chr8.2:11100355-11100374 | None:intergenic | 20.0% |
!!! | ATTATGATAATGTAAAAGAG+AGG | + | chr8.2:11101430-11101449 | MS.gene041532:CDS | 20.0% |
!!! | CATATGATTTTTTCGATTTA+AGG | + | chr8.2:11101057-11101076 | MS.gene041532:intron | 20.0% |
!!! | GCAAATAACAAACATATTTT+GGG | + | chr8.2:11100555-11100574 | MS.gene041532:CDS | 20.0% |
!!! | TTTCTTTTATGACTTTCAAA+TGG | + | chr8.2:11100522-11100541 | MS.gene041532:CDS | 20.0% |
!!! | TTTTCGATTTAAGGAAAAAT+GGG | + | chr8.2:11101066-11101085 | MS.gene041532:intron | 20.0% |
!!! | TTTTTCGATTTAAGGAAAAA+TGG | + | chr8.2:11101065-11101084 | MS.gene041532:intron | 20.0% |
! | ACAAGCATCACAAATTATAA+TGG | + | chr8.2:11100309-11100328 | MS.gene041532:CDS | 25.0% |
! | CAAAATAGTTGAAGATATGT+TGG | + | chr8.2:11101782-11101801 | MS.gene041532:CDS | 25.0% |
! | CAAGCATCACAAATTATAAT+GGG | + | chr8.2:11100310-11100329 | MS.gene041532:CDS | 25.0% |
! | CAATATTCTTGAACAAAATG+AGG | + | chr8.2:11099892-11099911 | MS.gene041532:CDS | 25.0% |
! | CACAAATGATCAATGATTAT+GGG | + | chr8.2:11100584-11100603 | MS.gene041532:CDS | 25.0% |
! | CTAAAAAACGAGTTAAATCT+TGG | + | chr8.2:11101943-11101962 | MS.gene041532:intron | 25.0% |
! | TGAAAGTCATAAAAGAAAGA+TGG | - | chr8.2:11100520-11100539 | None:intergenic | 25.0% |
! | TTGTTGGACTTAATAATCAT+CGG | + | chr8.2:11100677-11100696 | MS.gene041532:CDS | 25.0% |
! | TTTATCATTTCCAAGTGATA+CGG | - | chr8.2:11101853-11101872 | None:intergenic | 25.0% |
!! | AAGATGAATTTTTGAATGCA+TGG | + | chr8.2:11100989-11101008 | MS.gene041532:intron | 25.0% |
!! | AGACAATTCTGTTGATAAAT+TGG | + | chr8.2:11099865-11099884 | MS.gene041532:CDS | 25.0% |
!! | CTGTGATTTTCTCTTTTTTT+GGG | - | chr8.2:11102009-11102028 | None:intergenic | 25.0% |
!! | TGGAATTCCTCAATATTTTT+GGG | - | chr8.2:11101342-11101361 | None:intergenic | 25.0% |
!! | TTGGAATTCCTCAATATTTT+TGG | - | chr8.2:11101343-11101362 | None:intergenic | 25.0% |
!!! | AGATTTAACTCGTTTTTTAG+TGG | - | chr8.2:11101943-11101962 | None:intergenic | 25.0% |
AAAGCCTAAAACCATTCTAA+CGG | + | chr8.2:11100795-11100814 | MS.gene041532:CDS | 30.0% | |
AAATATTGAGGAATTCCAAG+AGG | + | chr8.2:11101344-11101363 | MS.gene041532:CDS | 30.0% | |
AAATCTTGGATTGAGAAAGA+AGG | + | chr8.2:11101957-11101976 | MS.gene041532:intron | 30.0% | |
AAATTCATAAGCATCTACCT+CGG | - | chr8.2:11099975-11099994 | None:intergenic | 30.0% | |
AACACTATATACTAAAGCGA+TGG | + | chr8.2:11101577-11101596 | MS.gene041532:CDS | 30.0% | |
ACAAGACAAATAAGGGTTAT+CGG | + | chr8.2:11100641-11100660 | MS.gene041532:CDS | 30.0% | |
ACCTAGATTGAAAATGAAGA+AGG | + | chr8.2:11101282-11101301 | MS.gene041532:intron | 30.0% | |
ATATAAGACAAAACGCTCTA+AGG | + | chr8.2:11100890-11100909 | MS.gene041532:CDS | 30.0% | |
ATATCAAGACACTTGCATAA+AGG | + | chr8.2:11101377-11101396 | MS.gene041532:CDS | 30.0% | |
ATCAATGATTATGGGTACTT+TGG | + | chr8.2:11100592-11100611 | MS.gene041532:CDS | 30.0% | |
ATCATCAAGCTTCAATTCAA+GGG | + | chr8.2:11102175-11102194 | MS.gene041532:CDS | 30.0% | |
ATGTCCTCCAATGATTAAAT+TGG | + | chr8.2:11101695-11101714 | MS.gene041532:CDS | 30.0% | |
ATTTCACTTGATCGAAAGAT+AGG | + | chr8.2:11100187-11100206 | MS.gene041532:CDS | 30.0% | |
CATTGAGAGTAATTGAATTG+AGG | - | chr8.2:11102149-11102168 | None:intergenic | 30.0% | |
CCAAAAAAAGAGAAAATCAC+AGG | + | chr8.2:11102007-11102026 | MS.gene041532:intron | 30.0% | |
CTCAATTCAATTACTCTCAA+TGG | + | chr8.2:11102147-11102166 | MS.gene041532:CDS | 30.0% | |
GAAGTAATCAAGATTGGAAA+GGG | + | chr8.2:11101619-11101638 | MS.gene041532:CDS | 30.0% | |
GAATAAAAGCAAAAAAGACG+GGG | + | chr8.2:11100045-11100064 | MS.gene041532:CDS | 30.0% | |
GCACAAATGATCAATGATTA+TGG | + | chr8.2:11100583-11100602 | MS.gene041532:CDS | 30.0% | |
GGAATAAAAGCAAAAAAGAC+GGG | + | chr8.2:11100044-11100063 | MS.gene041532:CDS | 30.0% | |
GGGAATAAAAGCAAAAAAGA+CGG | + | chr8.2:11100043-11100062 | MS.gene041532:CDS | 30.0% | |
GGGTATTTCTTTAGTTATGT+CGG | + | chr8.2:11100840-11100859 | MS.gene041532:CDS | 30.0% | |
TCAAATAACCACTGAAAAGA+AGG | - | chr8.2:11100748-11100767 | None:intergenic | 30.0% | |
TCAAATATCATATCCAAGTG+AGG | - | chr8.2:11099950-11099969 | None:intergenic | 30.0% | |
TCACTAAAGTATAGTGAAGT+GGG | + | chr8.2:11100457-11100476 | MS.gene041532:CDS | 30.0% | |
TTTCACTTGATCGAAAGATA+GGG | + | chr8.2:11100188-11100207 | MS.gene041532:CDS | 30.0% | |
! | AAACAATACCTTCTTTTCAG+TGG | + | chr8.2:11100737-11100756 | MS.gene041532:CDS | 30.0% |
! | AGAATTTGCTTCGAACAAAA+AGG | + | chr8.2:11100428-11100447 | MS.gene041532:CDS | 30.0% |
! | ATTATAATGGGAGATGAATC+TGG | + | chr8.2:11100322-11100341 | MS.gene041532:CDS | 30.0% |
! | CATATCTTCAACTATTTTGC+TGG | - | chr8.2:11101781-11101800 | None:intergenic | 30.0% |
! | CCTGTGATTTTCTCTTTTTT+TGG | - | chr8.2:11102010-11102029 | None:intergenic | 30.0% |
! | GAAACTTTTCTCAAAGCAAT+GGG | + | chr8.2:11100766-11100785 | MS.gene041532:CDS | 30.0% |
! | GCTTACTCTTTTGATATAGA+TGG | - | chr8.2:11100924-11100943 | None:intergenic | 30.0% |
! | TGAAACTTTTCTCAAAGCAA+TGG | + | chr8.2:11100765-11100784 | MS.gene041532:CDS | 30.0% |
!! | ACTTGTTGAGCATAATGTTT+TGG | + | chr8.2:11101020-11101039 | MS.gene041532:intron | 30.0% |
!! | GGAATTCCTCAATATTTTTG+GGG | - | chr8.2:11101341-11101360 | None:intergenic | 30.0% |
!!! | ATAATGTTTTGGAAGGTTCA+TGG | + | chr8.2:11101031-11101050 | MS.gene041532:intron | 30.0% |
AATGTCAAGCTACAATCCAA+GGG | + | chr8.2:11102283-11102302 | MS.gene041532:CDS | 35.0% | |
ACCGCATACAAGACAAATAA+GGG | + | chr8.2:11100634-11100653 | MS.gene041532:CDS | 35.0% | |
AGATTCACATGCTACAAAGA+AGG | + | chr8.2:11100082-11100101 | MS.gene041532:CDS | 35.0% | |
ATCATGTGAACATACTCTTC+CGG | - | chr8.2:11100262-11100281 | None:intergenic | 35.0% | |
ATGCATAGATCTACATGAAG+AGG | + | chr8.2:11100966-11100985 | MS.gene041532:intron | 35.0% | |
CATCATCAAGCTTCAATTCA+AGG | + | chr8.2:11102174-11102193 | MS.gene041532:CDS | 35.0% | |
CGCTTTAGTATATAGTGTTC+AGG | - | chr8.2:11101576-11101595 | None:intergenic | 35.0% | |
CTCACTAAAGTATAGTGAAG+TGG | + | chr8.2:11100456-11100475 | MS.gene041532:CDS | 35.0% | |
CTGTTGGCCAATTTAATCAT+TGG | - | chr8.2:11101705-11101724 | None:intergenic | 35.0% | |
CTTACACCCCAAAAATATTG+AGG | + | chr8.2:11101332-11101351 | MS.gene041532:CDS | 35.0% | |
CTTGAACAAAATGAGGAACA+TGG | + | chr8.2:11099899-11099918 | MS.gene041532:CDS | 35.0% | |
GATTTAAGGAAAAATGGGCA+TGG | + | chr8.2:11101071-11101090 | MS.gene041532:intron | 35.0% | |
GGAAGTAATCAAGATTGGAA+AGG | + | chr8.2:11101618-11101637 | MS.gene041532:CDS | 35.0% | |
GGATATGATATTTGAATCCG+AGG | + | chr8.2:11099955-11099974 | MS.gene041532:CDS | 35.0% | |
GTAAAAGAGAGGACAGTTAT+GGG | + | chr8.2:11101441-11101460 | MS.gene041532:CDS | 35.0% | |
GTAATTGAATTGAGGTCAAG+TGG | - | chr8.2:11102141-11102160 | None:intergenic | 35.0% | |
TATGTCAAACTGCAATCCAA+GGG | + | chr8.2:11102229-11102248 | MS.gene041532:CDS | 35.0% | |
TATGTTGGCCAAAAAATGTG+TGG | + | chr8.2:11101797-11101816 | MS.gene041532:CDS | 35.0% | |
TCGAAAGATAGGGAAATACA+AGG | + | chr8.2:11100198-11100217 | MS.gene041532:CDS | 35.0% | |
TGAAATCCCATTTCATGAAG+CGG | + | chr8.2:11101661-11101680 | MS.gene041532:CDS | 35.0% | |
TGTAAAAGAGAGGACAGTTA+TGG | + | chr8.2:11101440-11101459 | MS.gene041532:CDS | 35.0% | |
TTGGCCAATTTAATCATTGG+AGG | - | chr8.2:11101702-11101721 | None:intergenic | 35.0% | |
TTGGTATTCGTCGAGAATAT+GGG | + | chr8.2:11100023-11100042 | MS.gene041532:CDS | 35.0% | |
TTGTCTACCAAAATAGACGA+CGG | - | chr8.2:11099851-11099870 | None:intergenic | 35.0% | |
TTTGCTTCGAACAAAAAGGA+TGG | + | chr8.2:11100432-11100451 | MS.gene041532:CDS | 35.0% | |
TTTGGTATTCGTCGAGAATA+TGG | + | chr8.2:11100022-11100041 | MS.gene041532:CDS | 35.0% | |
! | ACCCTTATTTGTCTTGTATG+CGG | - | chr8.2:11100638-11100657 | None:intergenic | 35.0% |
! | CACTTTAAAAGAGCTGTCAA+TGG | + | chr8.2:11101211-11101230 | MS.gene041532:intron | 35.0% |
! | CATCGGCAAACAATCATTTT+TGG | + | chr8.2:11100694-11100713 | MS.gene041532:CDS | 35.0% |
! | CATTTCATGGATTGTGTACT+TGG | + | chr8.2:11100866-11100885 | MS.gene041532:CDS | 35.0% |
! | GCCTTCTTCATTTTCAATCT+AGG | - | chr8.2:11101286-11101305 | None:intergenic | 35.0% |
! | TGATCCGTTAGAATGGTTTT+AGG | - | chr8.2:11100802-11100821 | None:intergenic | 35.0% |
!! | CAATCAAGCGAAGTTGATAA+TGG | + | chr8.2:11102255-11102274 | MS.gene041532:CDS | 35.0% |
!! | GTTGAGCATAATGTTTTGGA+AGG | + | chr8.2:11101024-11101043 | MS.gene041532:intron | 35.0% |
!! | TAGTCATGCTTTGAAAGTGT+TGG | + | chr8.2:11101527-11101546 | MS.gene041532:CDS | 35.0% |
!! | TGCATAAAGGTGTTGAAAGA+AGG | + | chr8.2:11101390-11101409 | MS.gene041532:CDS | 35.0% |
!!! | CAAGAAACTTTTAGTTCCGT+AGG | - | chr8.2:11101471-11101490 | None:intergenic | 35.0% |
!!! | TTCTCCATCCACACATTTTT+TGG | - | chr8.2:11101808-11101827 | None:intergenic | 35.0% |
AAAAACTTACCGCTAACGAC+TGG | - | chr8.2:11102037-11102056 | None:intergenic | 40.0% | |
AAAGAGCTGTCAATGGTAAG+CGG | + | chr8.2:11101218-11101237 | MS.gene041532:intron | 40.0% | |
AATGGGCATGGACTTATGTT+CGG | + | chr8.2:11101083-11101102 | MS.gene041532:intron | 40.0% | |
ACTGTACCGCTTCATGAAAT+GGG | - | chr8.2:11101670-11101689 | None:intergenic | 40.0% | |
AGAATCAAGTGGAATGGTTC+AGG | + | chr8.2:11101824-11101843 | MS.gene041532:CDS | 40.0% | |
AGCATCTTGATCCGTTAGAA+TGG | - | chr8.2:11100809-11100828 | None:intergenic | 40.0% | |
AGTCCAACAAATACTCCCAA+CGG | - | chr8.2:11100667-11100686 | None:intergenic | 40.0% | |
ATCCAAGTGAGGTTTGATGT+CGG | - | chr8.2:11099939-11099958 | None:intergenic | 40.0% | |
ATGTCAAGCTACAATCCAAG+GGG | + | chr8.2:11102284-11102303 | MS.gene041532:CDS | 40.0% | |
CAATGTCAAGCTACAATCCA+AGG | + | chr8.2:11102282-11102301 | MS.gene041532:CDS | 40.0% | |
CACCGCATACAAGACAAATA+AGG | + | chr8.2:11100633-11100652 | MS.gene041532:CDS | 40.0% | |
CTATGTCAAACTGCAATCCA+AGG | + | chr8.2:11102228-11102247 | MS.gene041532:CDS | 40.0% | |
GAATATATGTCCAAGCAGGT+TGG | + | chr8.2:11100367-11100386 | MS.gene041532:CDS | 40.0% | |
GACAGTTATGGGAAATCCTA+CGG | + | chr8.2:11101452-11101471 | MS.gene041532:CDS | 40.0% | |
GATATTCCTCGTATTCCTCT+TGG | - | chr8.2:11101362-11101381 | None:intergenic | 40.0% | |
GCATGAATATATGTCCAAGC+AGG | + | chr8.2:11100363-11100382 | MS.gene041532:CDS | 40.0% | |
GCTGGACTCTTCATAAACTT+TGG | - | chr8.2:11101763-11101782 | None:intergenic | 40.0% | |
GGTTGGGAAGTAATCAAGAT+TGG | + | chr8.2:11101613-11101632 | MS.gene041532:CDS | 40.0% | |
GTTATGTCGGAGACATTTCA+TGG | + | chr8.2:11100853-11100872 | MS.gene041532:CDS | 40.0% | |
TAAAGAGAAAGAAGCCAGCA+TGG | + | chr8.2:11101869-11101888 | MS.gene041532:intron | 40.0% | |
TTGGCCAAAAAATGTGTGGA+TGG | + | chr8.2:11101801-11101820 | MS.gene041532:CDS | 40.0% | |
! | ACTTTTCTCAAAGCAATGGG+TGG | + | chr8.2:11100769-11100788 | MS.gene041532:CDS | 40.0% |
! | TATGCCTTTTGCCTTGACAA+CGG | - | chr8.2:11101898-11101917 | None:intergenic | 40.0% |
!! | ATGAGATTCTGAAGCTCTGT+TGG | - | chr8.2:11101721-11101740 | None:intergenic | 40.0% |
!!! | TTTTGGGGTGTAAGCATTTC+CGG | - | chr8.2:11101326-11101345 | None:intergenic | 40.0% |
AAATAAGGGTTATCGGCCGT+TGG | + | chr8.2:11100648-11100667 | MS.gene041532:CDS | 45.0% | |
AATAAGGGTTATCGGCCGTT+GGG | + | chr8.2:11100649-11100668 | MS.gene041532:CDS | 45.0% | |
ACAAAAGACGTCAACCGACT+GGG | + | chr8.2:11100119-11100138 | MS.gene041532:CDS | 45.0% | |
ACAGGAAAACCAGTCGTTAG+CGG | + | chr8.2:11102025-11102044 | MS.gene041532:intron | 45.0% | |
ACTAAAGCGATGGACAAGAG+AGG | + | chr8.2:11101587-11101606 | MS.gene041532:CDS | 45.0% | |
CACTGTACCGCTTCATGAAA+TGG | - | chr8.2:11101671-11101690 | None:intergenic | 45.0% | |
GAAACCGTTGTCAAGGCAAA+AGG | + | chr8.2:11101891-11101910 | MS.gene041532:intron | 45.0% | |
GGAATTCCAAGAGGAATACG+AGG | + | chr8.2:11101353-11101372 | MS.gene041532:CDS | 45.0% | |
GGATGGAGAATCAAGTGGAA+TGG | + | chr8.2:11101818-11101837 | MS.gene041532:CDS | 45.0% | |
GTTCAGGTAACCGTATCACT+TGG | + | chr8.2:11101840-11101859 | MS.gene041532:intron | 45.0% | |
GTTCGGAAAACATTCACTGC+AGG | + | chr8.2:11101100-11101119 | MS.gene041532:intron | 45.0% | |
TCTACGGCAGAAACTAGAAC+CGG | + | chr8.2:11100145-11100164 | MS.gene041532:CDS | 45.0% | |
TGTGTGGATGGAGAATCAAG+TGG | + | chr8.2:11101813-11101832 | MS.gene041532:CDS | 45.0% | |
! | TATATGTCCAAGCAGGTTGG+TGG | + | chr8.2:11100370-11100389 | MS.gene041532:CDS | 45.0% |
!! | ATATGTCCAAGCAGGTTGGT+GGG | + | chr8.2:11100371-11100390 | MS.gene041532:CDS | 45.0% |
AACCGGGTGTAATGCACGTA+TGG | + | chr8.2:11100162-11100181 | MS.gene041532:CDS | 50.0% | |
AACGGATCAAGATGCTGCGA+TGG | + | chr8.2:11100813-11100832 | MS.gene041532:CDS | 50.0% | |
ACACAACCACCTTCTTCAGC+CGG | + | chr8.2:11100240-11100259 | MS.gene041532:CDS | 50.0% | |
ACCCATACGTGCATTACACC+CGG | - | chr8.2:11100167-11100186 | None:intergenic | 50.0% | |
ACCGGGTGTAATGCACGTAT+GGG | + | chr8.2:11100163-11100182 | MS.gene041532:CDS | 50.0% | |
ATGGACAAGAGAGGCAAGGT+TGG | + | chr8.2:11101596-11101615 | MS.gene041532:CDS | 50.0% | |
CAAAAGACGTCAACCGACTG+GGG | + | chr8.2:11100120-11100139 | MS.gene041532:CDS | 50.0% | |
CAAGATGCTGCGATGGCAAA+GGG | + | chr8.2:11100820-11100839 | MS.gene041532:CDS | 50.0% | |
CAGCATGGAAACCGTTGTCA+AGG | + | chr8.2:11101884-11101903 | MS.gene041532:intron | 50.0% | |
CATACTCTTCCGGCTGAAGA+AGG | - | chr8.2:11100252-11100271 | None:intergenic | 50.0% | |
CTACGGCAGAAACTAGAACC+GGG | + | chr8.2:11100146-11100165 | MS.gene041532:CDS | 50.0% | |
CTCTCATCGTCGCATATCTG+AGG | + | chr8.2:11100285-11100304 | MS.gene041532:CDS | 50.0% | |
CTTCGCTTGATTGTGTCCCT+TGG | - | chr8.2:11102248-11102267 | None:intergenic | 50.0% | |
CTTGACAACGGTTTCCATGC+TGG | - | chr8.2:11101886-11101905 | None:intergenic | 50.0% | |
GACAAAAGACGTCAACCGAC+TGG | + | chr8.2:11100118-11100137 | MS.gene041532:CDS | 50.0% | |
TCAAGATGCTGCGATGGCAA+AGG | + | chr8.2:11100819-11100838 | MS.gene041532:CDS | 50.0% | |
TGCCGACATCAAACCTCACT+TGG | + | chr8.2:11099934-11099953 | MS.gene041532:CDS | 50.0% | |
TGGACAAGAGAGGCAAGGTT+GGG | + | chr8.2:11101597-11101616 | MS.gene041532:CDS | 50.0% | |
! | GTTGGTGGGATAGAGATGGT+TGG | + | chr8.2:11100385-11100404 | MS.gene041532:CDS | 50.0% |
ACTCTTCCGGCTGAAGAAGG+TGG | - | chr8.2:11100249-11100268 | None:intergenic | 55.0% | |
AGCGATGGACAAGAGAGGCA+AGG | + | chr8.2:11101592-11101611 | MS.gene041532:CDS | 55.0% | |
CTCTATCCCACCAACCTGCT+TGG | - | chr8.2:11100380-11100399 | None:intergenic | 55.0% | |
GGGTGTAAGCATTTCCGGCT+TGG | - | chr8.2:11101321-11101340 | None:intergenic | 55.0% | |
TCAACCGACTGGGGAGTCTA+CGG | + | chr8.2:11100129-11100148 | MS.gene041532:CDS | 55.0% | |
!! | CGGCCGTTGGGAGTATTTGT+TGG | + | chr8.2:11100661-11100680 | MS.gene041532:CDS | 55.0% |
!! | GCAGGTTGGTGGGATAGAGA+TGG | + | chr8.2:11100381-11100400 | MS.gene041532:CDS | 55.0% |
GCTCGAATGCTCGTCCAAGC+CGG | + | chr8.2:11101304-11101323 | MS.gene041532:CDS | 60.0% | |
TCTGCCGTAGACTCCCCAGT+CGG | - | chr8.2:11100136-11100155 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 11099842 | 11102314 | 11099842 | ID=MS.gene041532 |
chr8.2 | mRNA | 11099842 | 11102314 | 11099842 | ID=MS.gene041532.t1;Parent=MS.gene041532 |
chr8.2 | exon | 11099842 | 11100937 | 11099842 | ID=MS.gene041532.t1.exon1;Parent=MS.gene041532.t1 |
chr8.2 | CDS | 11099842 | 11100937 | 11099842 | ID=cds.MS.gene041532.t1;Parent=MS.gene041532.t1 |
chr8.2 | exon | 11101304 | 11101845 | 11101304 | ID=MS.gene041532.t1.exon2;Parent=MS.gene041532.t1 |
chr8.2 | CDS | 11101304 | 11101845 | 11101304 | ID=cds.MS.gene041532.t1;Parent=MS.gene041532.t1 |
chr8.2 | exon | 11102135 | 11102314 | 11102135 | ID=MS.gene041532.t1.exon3;Parent=MS.gene041532.t1 |
chr8.2 | CDS | 11102135 | 11102314 | 11102135 | ID=cds.MS.gene041532.t1;Parent=MS.gene041532.t1 |
Gene Sequence |
Protein sequence |