AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene041579

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041579.t1 MTR_4g119960 98.509 805 12 0 1 805 1 805 0.0 1655
MS.gene041579.t1 MTR_4g119960 98.427 572 9 0 234 805 2 573 0.0 1174
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041579.t1 AT4G15840 57.234 781 280 16 34 805 43 778 0.0 819
MS.gene041579.t1 AT4G15840 56.342 749 273 16 34 773 43 746 0.0 765

Find 235 sgRNAs with CRISPR-Local

Find 412 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGCCTTGGCATATCTTTA+TGG 0.134615 8.4:-12066468 MS.gene041579:CDS
TCTCCCGCAGTTCATGTTTC+AGG 0.239524 8.4:-12067161 MS.gene041579:intron
CATTATTATCATTAAGTTTA+GGG 0.245800 8.4:+12066439 None:intergenic
GCATTATTATCATTAAGTTT+AGG 0.249784 8.4:+12066438 None:intergenic
CGCTTCCTTTCTCGACCTTC+AGG 0.263772 8.4:-12066397 MS.gene041579:intron
TGACCTGTCTTCTGCCTATA+TGG 0.267976 8.4:+12065080 None:intergenic
CAAATTGAAGGTTTCAATTC+CGG 0.268850 8.4:-12067246 MS.gene041579:CDS
CATTGTTATCATCGATTTGC+AGG 0.269175 8.4:+12066511 None:intergenic
GAATCTTCAGGTCAGTATTC+AGG 0.272395 8.4:-12062745 MS.gene041579:intron
TTCAAACTTCTTGGCTTATC+AGG 0.272512 8.4:-12066185 MS.gene041579:intron
AGCAGCACTGGCTTCTTTCC+AGG 0.278200 8.4:+12066542 None:intergenic
CTTAGCCAGGGAGGGAATTA+TGG 0.289922 8.4:-12064042 MS.gene041579:CDS
TACCAAGGGTGCGCCGTCCC+TGG 0.292685 8.4:+12062703 None:intergenic
TTGCCTTGGCATATCTTTAT+GGG 0.305502 8.4:-12066467 MS.gene041579:CDS
GGTGAAGGAGGAGGGTTGTT+TGG 0.306761 8.4:+12067393 None:intergenic
CAACAGTTCTTCTATATCAT+TGG 0.307501 8.4:-12063878 MS.gene041579:CDS
GCTATGGACTTCAAACTTCT+TGG 0.308454 8.4:-12066194 MS.gene041579:CDS
ATGGAACCCCTTTGCTTTCA+TGG 0.311933 8.4:-12065108 MS.gene041579:CDS
CTTCATGAAAAGGTTTGAAT+TGG 0.312775 8.4:-12065695 MS.gene041579:intron
GAACCAGCATAGAAAACTTC+TGG 0.314399 8.4:+12062858 None:intergenic
TGCGAACATGTTCAAATTGA+AGG 0.319930 8.4:-12067258 MS.gene041579:CDS
AATCTCCAAGCTCAACTAAA+AGG 0.323259 8.4:+12065467 None:intergenic
GCGTGTTAGAACTGCTTGTT+GGG 0.332796 8.4:-12066025 MS.gene041579:CDS
ACCAAGGGTGCGCCGTCCCT+GGG 0.347154 8.4:+12062704 None:intergenic
GGTGCTATTGATGGGCTTGC+AGG 0.348289 8.4:-12064249 MS.gene041579:CDS
TTCATCTCTATAGTTTCCTC+TGG 0.349358 8.4:+12065048 None:intergenic
TTTGCGGAGAACCAAGATTA+TGG 0.353090 8.4:-12066060 MS.gene041579:CDS
GGAATTCCTGGTTCTGAGTC+TGG 0.355047 8.4:-12065616 MS.gene041579:CDS
CATCCTGCACATGGAATTCC+TGG 0.358555 8.4:-12065628 MS.gene041579:CDS
AACACAAAGGGAACAAGAAA+TGG 0.359332 8.4:-12063998 MS.gene041579:CDS
ATTGGCTTTCCACACATTCC+TGG 0.360070 8.4:-12065677 MS.gene041579:CDS
GGAAGCGCTGCGTTGGTGAT+AGG 0.361656 8.4:+12067371 None:intergenic
AAAGGTGACTGCACGGTATC+AGG 0.365867 8.4:-12062244 None:intergenic
GTTGAGGTGCCTCTTGGTGC+TGG 0.374916 8.4:-12065280 MS.gene041579:CDS
CATTGCATTAACAACTATAT+CGG 0.379133 8.4:+12067215 None:intergenic
TCCATCGTATCCTTGTGATA+TGG 0.379836 8.4:-12065362 MS.gene041579:CDS
ATTGATGGGCTTGCAGGTAT+TGG 0.382051 8.4:-12064243 MS.gene041579:CDS
TCCAGTGAATGGGGAAGATA+TGG 0.382120 8.4:-12065127 MS.gene041579:CDS
TGGATTCAAGTTTGGTGAAA+TGG 0.384240 8.4:+12065381 None:intergenic
TGATATGGAAGGACCTTCAT+TGG 0.385172 8.4:-12065347 MS.gene041579:CDS
TGATTCAGGAACATGCTTCA+TGG 0.385881 8.4:-12066567 MS.gene041579:intron
AACCAAGATTATGGCATTCA+TGG 0.388083 8.4:-12066051 MS.gene041579:CDS
TGGAACCCCTTTGCTTTCAT+GGG 0.402678 8.4:-12065107 MS.gene041579:CDS
CTTTCATGGGGTGGCCATAT+AGG 0.405787 8.4:-12065094 MS.gene041579:CDS
GGATACGATGGATTCAAGTT+TGG 0.407077 8.4:+12065373 None:intergenic
CACTTACCGCTTCTCTTCAC+AGG 0.408715 8.4:+12065790 None:intergenic
AGCAAGTTGAACCCGTTGAT+TGG 0.412078 8.4:+12065411 None:intergenic
AGCTTTAGTCGGGCTTAGCC+AGG 0.412510 8.4:-12064055 MS.gene041579:CDS
CTTGGTGCTGGAACAACTAC+TGG 0.416579 8.4:-12065268 MS.gene041579:CDS
ACCCCTTTGCTTTCATGGGG+TGG 0.419158 8.4:-12065103 MS.gene041579:CDS
CCCCAGGGACGGCGCACCCT+TGG 0.419963 8.4:-12062705 MS.gene041579:intron
CATGTTAGAGGTGCTATTGA+TGG 0.422366 8.4:-12064258 MS.gene041579:CDS
CATGATGTTCTCACCCCGTC+TGG 0.423356 8.4:+12065307 None:intergenic
AGAAAGCAGCTTGAAGAGAT+AGG 0.429338 8.4:-12064947 MS.gene041579:CDS
TGGTGATAGGGTGAAGGAGG+AGG 0.433042 8.4:+12067384 None:intergenic
AAGCTGTAAATGATGGTCTA+TGG 0.436191 8.4:-12064913 MS.gene041579:CDS
AACATACCATTGGTATAGAA+TGG 0.436452 8.4:-12063909 MS.gene041579:CDS
CATTTCTGATTCCAATCAAC+GGG 0.437158 8.4:-12065422 MS.gene041579:CDS
TGGGCTCACTTCCAGTGAAT+GGG 0.438222 8.4:-12065137 MS.gene041579:CDS
GTGGGCTCACTTCCAGTGAA+TGG 0.440603 8.4:-12065138 MS.gene041579:CDS
GGTGGTTGGATCATTGTTAT+CGG 0.441545 8.4:+12067320 None:intergenic
GATATAGTTGTTAATGCAAT+GGG 0.442170 8.4:-12067213 MS.gene041579:CDS
GACTGTTTACTAGGTGTTTG+CGG 0.444119 8.4:-12066076 MS.gene041579:intron
ACCTATTGTTGTTATCTGAA+TGG 0.444189 8.4:+12065206 None:intergenic
CAAGATGTTGGAAACTGACT+TGG 0.448497 8.4:-12065536 MS.gene041579:CDS
TTTCTGTTGCCAACGCCAAA+TGG 0.451275 8.4:+12064156 None:intergenic
CGATATAGTTGTTAATGCAA+TGG 0.451581 8.4:-12067214 MS.gene041579:CDS
CCTGGTTCTGAGTCTGGAAC+TGG 0.451697 8.4:-12065610 MS.gene041579:CDS
TCTTCTACAGGTGAAAGAAA+TGG 0.451971 8.4:-12064303 MS.gene041579:CDS
CCCCATGAATGCCATAATCT+TGG 0.453093 8.4:+12066049 None:intergenic
AGCGTGTTAGAACTGCTTGT+TGG 0.455113 8.4:-12066026 MS.gene041579:CDS
CTATGCTGGTTCTTTGTGGA+AGG 0.455390 8.4:-12062847 MS.gene041579:intron
AATGTATGAGATGAAAGTTT+AGG 0.458406 8.4:+12065848 None:intergenic
CCTTGCAAAGCTGTAAATGA+TGG 0.459493 8.4:-12064920 MS.gene041579:CDS
TGGTGAGATGATGGCTGCTT+GGG 0.462275 8.4:+12067345 None:intergenic
GTATTTCTTAATATATTTGA+AGG 0.462512 8.4:-12065019 MS.gene041579:CDS
ATGGGATTGCAAAGTACTGC+TGG 0.466131 8.4:-12063979 MS.gene041579:CDS
ACCATTCAGATAACAACAAT+AGG 0.466623 8.4:-12065207 MS.gene041579:CDS
ATGGATTGACAGCTTTAGTC+GGG 0.469334 8.4:-12064065 MS.gene041579:CDS
TGACTTACCCAAAGCGAAAA+GGG 0.470869 8.4:+12063827 None:intergenic
TCCATATCTTCCCCATTCAC+TGG 0.470957 8.4:+12065126 None:intergenic
GATCACAATGGAGACCTGTC+TGG 0.471883 8.4:-12064090 MS.gene041579:CDS
TCTATACCAATGGTATGTTC+TGG 0.473773 8.4:+12063913 None:intergenic
GAGGGTTGTTTGGATATTGA+GGG 0.475120 8.4:+12067403 None:intergenic
GGAGGGTTGTTTGGATATTG+AGG 0.475128 8.4:+12067402 None:intergenic
CATAATCATAACAATATACC+TGG 0.475480 8.4:-12064354 MS.gene041579:CDS
TTTCATCGAGTTCTTGTAGT+GGG 0.476647 8.4:-12065156 MS.gene041579:CDS
ACTACTGGAGTGGGTATTGA+AGG 0.478672 8.4:-12065253 MS.gene041579:CDS
TCTCGTGTGCCATTTGGCGT+TGG 0.481287 8.4:-12064165 MS.gene041579:CDS
GGCCACCCCATGAAAGCAAA+GGG 0.481323 8.4:+12065101 None:intergenic
GCACAGGCTTGGTGATGGCC+AGG 0.485817 8.4:-12062892 MS.gene041579:CDS
CAGGGTCACAATAGCAGCAC+TGG 0.488664 8.4:+12066530 None:intergenic
TCTGATAACACCAAGGGAAA+AGG 0.488742 8.4:-12065580 MS.gene041579:CDS
GAGTCTTAAAAGTGATCTAA+AGG 0.489618 8.4:-12065506 MS.gene041579:CDS
GGGTATCCACAGATCATTAG+AGG 0.490981 8.4:+12065811 None:intergenic
CGAGGCTATTGCAATTGCCT+TGG 0.492878 8.4:-12066481 MS.gene041579:CDS
CTGACTTACCCAAAGCGAAA+AGG 0.493778 8.4:+12063826 None:intergenic
ACACAAAGGGAACAAGAAAT+GGG 0.495586 8.4:-12063997 MS.gene041579:CDS
GACAATGAATTACCCAATGA+AGG 0.502773 8.4:+12065334 None:intergenic
GAACCAGGAATTCCATGTGC+AGG 0.505773 8.4:+12065625 None:intergenic
GTTGTTATCTGAATGGTAGC+AGG 0.506164 8.4:+12065213 None:intergenic
TGTTATGTTGAGGTGCCTCT+TGG 0.506254 8.4:-12065286 MS.gene041579:CDS
TTTGAGGAAGTGCACAGGCT+TGG 0.507777 8.4:-12062903 MS.gene041579:CDS
GGAACATGCTTCATGGTCCC+TGG 0.508066 8.4:-12066560 MS.gene041579:CDS
ATGTTCTTGTATGTAAGATC+CGG 0.508845 8.4:+12064374 None:intergenic
TTGTTCCATAATTCCCTCCC+TGG 0.509226 8.4:+12064037 None:intergenic
TGGTGTCTCTAACAATTGTA+CGG 0.509645 8.4:+12063933 None:intergenic
GGTGATAGGGTGAAGGAGGA+GGG 0.510194 8.4:+12067385 None:intergenic
TATGTTGCTGAATCTTCTAC+AGG 0.511758 8.4:-12064315 MS.gene041579:CDS
CCAGTTCCAGACTCAGAACC+AGG 0.512258 8.4:+12065610 None:intergenic
TATTTCTTAATATATTTGAA+GGG 0.512575 8.4:-12065018 MS.gene041579:CDS
AGATGATGGCTGCTTGGGAA+TGG 0.512683 8.4:+12067350 None:intergenic
CCTGTACGGGTACATGTTAG+AGG 0.513408 8.4:-12064270 MS.gene041579:CDS
ACGTGCTTCTGAATCATCAT+TGG 0.515180 8.4:+12064116 None:intergenic
GTAGGAGGTGAAGCCGCTGC+AGG 0.516779 8.4:+12064201 None:intergenic
ACATACCATTGGTATAGAAT+GGG 0.517714 8.4:-12063908 MS.gene041579:CDS
CTGTCAATCCATCTCCAGAC+AGG 0.521042 8.4:+12064076 None:intergenic
GATATGGAAGGACCTTCATT+GGG 0.523399 8.4:-12065346 MS.gene041579:CDS
ACCAAGATTATGGCATTCAT+GGG 0.523479 8.4:-12066050 MS.gene041579:CDS
TCATCTCTATAGTTTCCTCT+GGG 0.527103 8.4:+12065049 None:intergenic
ATGTTAGAGGTGCTATTGAT+GGG 0.529897 8.4:-12064257 MS.gene041579:CDS
AATGGAGACCTGTCTGGAGA+TGG 0.530070 8.4:-12064084 MS.gene041579:CDS
TTCAGATGCTTCTTAGTCAG+AGG 0.530461 8.4:-12064494 MS.gene041579:intron
GTTGAGCTTGGAGATTCAGA+AGG 0.532108 8.4:-12065460 MS.gene041579:CDS
TGAAACATGAACTGCGGGAG+AGG 0.532459 8.4:+12067163 None:intergenic
CCAAGCTCAACTAAAAGGTT+AGG 0.533794 8.4:+12065472 None:intergenic
ATTTCATTATATCTGAGCTA+TGG 0.534101 8.4:-12066210 MS.gene041579:CDS
ATGGTGAGATGATGGCTGCT+TGG 0.535393 8.4:+12067344 None:intergenic
GATGGATTGACAGCTTTAGT+CGG 0.536660 8.4:-12064066 MS.gene041579:CDS
TCAGATGCTTCTTAGTCAGA+GGG 0.537873 8.4:-12064493 MS.gene041579:intron
GCACGTAATTCAGCGGTGGT+TGG 0.538329 8.4:+12067306 None:intergenic
CCAAGGGTGCGCCGTCCCTG+GGG 0.538403 8.4:+12062705 None:intergenic
GAAGCGCTGCGTTGGTGATA+GGG 0.547226 8.4:+12067372 None:intergenic
GCAGCACTGGCTTCTTTCCA+GGG 0.547988 8.4:+12066543 None:intergenic
TGGGAATGGAAGCGCTGCGT+TGG 0.548811 8.4:+12067364 None:intergenic
ATTCATTGTCTGATCCAGAC+GGG 0.548969 8.4:-12065321 MS.gene041579:CDS
CCATCATTTACAGCTTTGCA+AGG 0.550593 8.4:+12064920 None:intergenic
AAGATGTTGGAAACTGACTT+GGG 0.551013 8.4:-12065535 MS.gene041579:CDS
TGGGATTGCAAAGTACTGCT+GGG 0.552611 8.4:-12063978 MS.gene041579:CDS
AAATGATGGTCTATGGCTGC+AGG 0.554515 8.4:-12064906 MS.gene041579:intron
ATTGTTATCATCGATTTGCA+GGG 0.554872 8.4:+12066512 None:intergenic
GGAACCCCTTTGCTTTCATG+GGG 0.556059 8.4:-12065106 MS.gene041579:CDS
ACATACAGAGCTAACACAAA+GGG 0.557241 8.4:-12064010 MS.gene041579:CDS
CTGAAGGTCGAGAAAGGAAG+CGG 0.561497 8.4:+12066398 None:intergenic
GTATGTTGACTCGCGTGAAA+AGG 0.562047 8.4:-12062262 MS.gene041579:CDS
TGGCTGCACTAACAAGATGT+TGG 0.562461 8.4:-12065548 MS.gene041579:CDS
ATTGAAGGGCCTTCTGAGGA+AGG 0.562708 8.4:-12065238 MS.gene041579:CDS
CCTCTGTCAAAGTGGCGGCA+TGG 0.563399 8.4:-12065998 MS.gene041579:CDS
ACATACCTGAAGGTCGAGAA+AGG 0.565685 8.4:+12066392 None:intergenic
CCTCTAACATGTACCCGTAC+AGG 0.568599 8.4:+12064270 None:intergenic
CAGGATTGTTTCTTCACCGT+CGG 0.568921 8.4:-12062594 MS.gene041579:CDS
GAGACGATGAAGGTGATAAG+TGG 0.569640 8.4:+12067188 None:intergenic
CGAGAAAGGAAGCGGCAGCA+AGG 0.571828 8.4:+12066406 None:intergenic
CAGAGATAACTGATGTGCAC+AGG 0.572463 8.4:-12062567 MS.gene041579:CDS
ATTCTCCCATTCTATACCAA+TGG 0.575296 8.4:+12063903 None:intergenic
GGTGTCTCTAACAATTGTAC+GGG 0.576585 8.4:+12063934 None:intergenic
ACATTTCTGATTCCAATCAA+CGG 0.579154 8.4:-12065423 MS.gene041579:CDS
GGGAGAGGATGAGACGATGA+AGG 0.579393 8.4:+12067178 None:intergenic
TTCAGATAACAACAATAGGT+TGG 0.581192 8.4:-12065203 MS.gene041579:CDS
AACTACATTTGTTCCTGCAG+CGG 0.583833 8.4:-12064214 MS.gene041579:CDS
TGGCCATATAGGCAGAAGAC+AGG 0.584793 8.4:-12065083 MS.gene041579:CDS
TCATCATTGGCTGCAGACTG+AGG 0.584853 8.4:+12064129 None:intergenic
TAGCAGGATCCTTCCTCAGA+AGG 0.587745 8.4:+12065229 None:intergenic
CTTCTGGAGAATGCTTGACC+TGG 0.589008 8.4:+12062874 None:intergenic
ATTTCTTAATATATTTGAAG+GGG 0.591640 8.4:-12065017 MS.gene041579:CDS
CAAGGGTGCGCCGTCCCTGG+GGG 0.593226 8.4:+12062706 None:intergenic
CATCATTGGCTGCAGACTGA+GGG 0.595380 8.4:+12064130 None:intergenic
TAACCTGAAACATGAACTGC+GGG 0.595412 8.4:+12067158 None:intergenic
TACTGACCTCTAATGATCTG+TGG 0.595873 8.4:-12065817 MS.gene041579:CDS
GCTTTAGTCGGGCTTAGCCA+GGG 0.596401 8.4:-12064054 MS.gene041579:CDS
TTGGATCATTGTTATCGGAA+TGG 0.599637 8.4:+12067325 None:intergenic
AATTTGAACATGTTCGCAGA+GGG 0.601296 8.4:+12067263 None:intergenic
TGGCCACCCCATGAAAGCAA+AGG 0.602137 8.4:+12065100 None:intergenic
ATTGTTTCTTCACCGTCGGA+AGG 0.603193 8.4:-12062590 MS.gene041579:CDS
GGGCTTGCAGGTATTGGCCG+TGG 0.604369 8.4:-12064237 MS.gene041579:CDS
TTCTTGTATGTAAGATCCGG+TGG 0.606895 8.4:+12064377 None:intergenic
AAGGGAAAAGGTATAGCTGA+TGG 0.608328 8.4:-12065568 MS.gene041579:CDS
TTTCTTAATATATTTGAAGG+GGG 0.609043 8.4:-12065016 MS.gene041579:CDS
TCCATATCACAAGGATACGA+TGG 0.609813 8.4:+12065361 None:intergenic
TTATCGGAATGGTGAGATGA+TGG 0.610701 8.4:+12067336 None:intergenic
CAATTTGAACATGTTCGCAG+AGG 0.611329 8.4:+12067262 None:intergenic
TCGTATCCTTGTGATATGGA+AGG 0.611508 8.4:-12065358 MS.gene041579:CDS
CTGCGTTGGTGATAGGGTGA+AGG 0.611633 8.4:+12067378 None:intergenic
TAGTCGGGCTTAGCCAGGGA+GGG 0.611766 8.4:-12064050 MS.gene041579:CDS
CCATGCCGCCACTTTGACAG+AGG 0.611997 8.4:+12065998 None:intergenic
GAAAAGACAAATCGTGTAGG+AGG 0.612265 8.4:+12064186 None:intergenic
GAGACACCAGAACATACCAT+TGG 0.615183 8.4:-12063919 MS.gene041579:CDS
CGTTGGTGATAGGGTGAAGG+AGG 0.615421 8.4:+12067381 None:intergenic
ACTTACCCAAAGCGAAAAGG+GGG 0.617208 8.4:+12063829 None:intergenic
GGGTATTGAAGGGCCTTCTG+AGG 0.620419 8.4:-12065242 MS.gene041579:CDS
GGGCTCACTTCCAGTGAATG+GGG 0.620580 8.4:-12065136 MS.gene041579:CDS
CAGTTATCTCTGCCTTCCGA+CGG 0.621554 8.4:+12062578 None:intergenic
AATTCATTGTCTGATCCAGA+CGG 0.623772 8.4:-12065322 MS.gene041579:CDS
CGCGTGAAAAGGTGACTGCA+CGG 0.624156 8.4:-12062251 MS.gene041579:CDS
CAGGAACAAATGTAGTTCCA+CGG 0.627613 8.4:+12064220 None:intergenic
TATTATCATTAAGTTTAGGG+TGG 0.630240 8.4:+12066442 None:intergenic
GGGATTGCAAAGTACTGCTG+GGG 0.630860 8.4:-12063977 MS.gene041579:CDS
ATAATCATAACAATATACCT+GGG 0.635196 8.4:-12064353 MS.gene041579:CDS
CTACTGGAGTGGGTATTGAA+GGG 0.635325 8.4:-12065252 MS.gene041579:CDS
TAATCATAACAATATACCTG+GGG 0.636900 8.4:-12064352 MS.gene041579:CDS
AAGATTGAACATCCTGCACA+TGG 0.639055 8.4:-12065637 MS.gene041579:CDS
TGCTGGAACAACTACTGGAG+TGG 0.639082 8.4:-12065263 MS.gene041579:CDS
GACTTACCCAAAGCGAAAAG+GGG 0.644219 8.4:+12063828 None:intergenic
GATAACTGATGTGCACAGGA+AGG 0.644413 8.4:-12062563 MS.gene041579:intron
CATGTTCGCAGAGGGAAGCG+AGG 0.645597 8.4:+12067271 None:intergenic
GCTGGAACAACTACTGGAGT+GGG 0.645613 8.4:-12065262 MS.gene041579:CDS
TGGCGGCATGGAGTTGAGAG+AGG 0.646346 8.4:-12065986 MS.gene041579:intron
CGAGAAAAGACAAATCGTGT+AGG 0.648943 8.4:+12064183 None:intergenic
ACTTACCGCTTCTCTTCACA+GGG 0.651417 8.4:+12065791 None:intergenic
GAAGTGCACAGGCTTGGTGA+TGG 0.655070 8.4:-12062897 MS.gene041579:CDS
GGATACCCTGTGAAGAGAAG+CGG 0.660763 8.4:-12065796 MS.gene041579:intron
GGCTACCTCTGTCAAAGTGG+CGG 0.660938 8.4:-12066003 MS.gene041579:CDS
GTTCCCATAAAGATATGCCA+AGG 0.664821 8.4:+12066464 None:intergenic
ATTCATTCTGATAACACCAA+GGG 0.665141 8.4:-12065586 MS.gene041579:CDS
CATTCATTCTGATAACACCA+AGG 0.669271 8.4:-12065587 MS.gene041579:CDS
GAAGCACGTGCTGATCACAA+TGG 0.669347 8.4:-12064102 MS.gene041579:CDS
TTAGTCGGGCTTAGCCAGGG+AGG 0.669348 8.4:-12064051 MS.gene041579:CDS
TGGGGCTACCTCTGTCAAAG+TGG 0.670960 8.4:-12066006 MS.gene041579:CDS
CGTGTTAGAACTGCTTGTTG+GGG 0.673137 8.4:-12066024 MS.gene041579:CDS
TACATACAGAGCTAACACAA+AGG 0.673898 8.4:-12064011 MS.gene041579:CDS
TTCATTGTCTGATCCAGACG+GGG 0.678647 8.4:-12065320 MS.gene041579:CDS
GAAGGTCCTTCCATATCACA+AGG 0.679216 8.4:+12065352 None:intergenic
GAGAACATCATGTTATGTTG+AGG 0.681319 8.4:-12065296 MS.gene041579:CDS
GAGAGCACGTAATTCAGCGG+TGG 0.682747 8.4:+12067302 None:intergenic
ATCGAGAGCACGTAATTCAG+CGG 0.684133 8.4:+12067299 None:intergenic
TGATAACAATGTTAATGACG+AGG 0.687261 8.4:-12066499 MS.gene041579:CDS
GTAGTTGTTCCAGCACCAAG+AGG 0.688597 8.4:+12065271 None:intergenic
AGATGTTGGAAACTGACTTG+GGG 0.689189 8.4:-12065534 MS.gene041579:CDS
CTTACCCAAAGCGAAAAGGG+GGG 0.699863 8.4:+12063830 None:intergenic
CCAAGATTATGGCATTCATG+GGG 0.706870 8.4:-12066049 MS.gene041579:CDS
CAGGTCAAAGCTCATCCCAG+AGG 0.707800 8.4:-12065064 MS.gene041579:CDS
GGATTGCAAAGTACTGCTGG+GGG 0.721700 8.4:-12063976 MS.gene041579:CDS
AATCATAACAATATACCTGG+GGG 0.723850 8.4:-12064351 MS.gene041579:CDS
ATAACCTGAAACATGAACTG+CGG 0.736403 8.4:+12067157 None:intergenic
GCCACCCCATGAAAGCAAAG+GGG 0.742348 8.4:+12065102 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATAATTGATAAAGTAATA+TGG - chr8.4:12065868-12065887 MS.gene041579:intron 10.0%
!! TATATTTGTATAATTTAGAT+AGG - chr8.4:12062966-12062985 MS.gene041579:intron 10.0%
!! TATTTCTTAATATATTTGAA+GGG - chr8.4:12064638-12064657 MS.gene041579:intron 10.0%
!! TTCATATATTTCAATTATTT+GGG - chr8.4:12067131-12067150 MS.gene041579:intron 10.0%
!! TTTCATATATTTCAATTATT+TGG - chr8.4:12067130-12067149 MS.gene041579:intron 10.0%
!!! AGATTTATAATGTTTTTATT+TGG - chr8.4:12063380-12063399 MS.gene041579:intron 10.0%
!! AAAATGATTTATGTTTAGAT+AGG - chr8.4:12062755-12062774 MS.gene041579:intron 15.0%
!! AAATAAAAACTACAAATTCT+AGG - chr8.4:12062827-12062846 MS.gene041579:intron 15.0%
!! ATTTCTTAATATATTTGAAG+GGG - chr8.4:12064639-12064658 MS.gene041579:intron 15.0%
!! CATGTAATAAATCTATAAAA+GGG + chr8.4:12067261-12067280 None:intergenic 15.0%
!! CATTATTATCATTAAGTTTA+GGG + chr8.4:12063220-12063239 None:intergenic 15.0%
!! GTATTTCTTAATATATTTGA+AGG - chr8.4:12064637-12064656 MS.gene041579:intron 15.0%
!! TATAAAAGGGATAAAAAAAA+AGG + chr8.4:12067248-12067267 None:intergenic 15.0%
!!! TTTTTCTTTAAGATTCTAAA+TGG + chr8.4:12064813-12064832 None:intergenic 15.0%
!! AAAAAAGAAACACAGTTAAA+GGG + chr8.4:12066163-12066182 None:intergenic 20.0%
!! AATTATTAATAGTTGCAAAG+TGG + chr8.4:12065856-12065875 None:intergenic 20.0%
!! ACATCATGAAGTAAAATATA+CGG + chr8.4:12062639-12062658 None:intergenic 20.0%
!! AGTAGTTAAATTTCACAAAT+GGG + chr8.4:12063523-12063542 None:intergenic 20.0%
!! ATAAATACAATAACCAACTT+AGG + chr8.4:12067157-12067176 None:intergenic 20.0%
!! ATAATCATAACAATATACCT+GGG - chr8.4:12065303-12065322 MS.gene041579:CDS 20.0%
!! ATGTAATAAAACATTACCAA+GGG + chr8.4:12066970-12066989 None:intergenic 20.0%
!! ATTCATTGGACTAAAATTAT+TGG - chr8.4:12065088-12065107 MS.gene041579:CDS 20.0%
!! CACAGAAAATATAGTTTAAA+AGG + chr8.4:12066297-12066316 None:intergenic 20.0%
!! CCATGTAATAAATCTATAAA+AGG + chr8.4:12067262-12067281 None:intergenic 20.0%
!! GCATTATTATCATTAAGTTT+AGG + chr8.4:12063221-12063240 None:intergenic 20.0%
!! GTATAGAAATTACTATTCAT+TGG - chr8.4:12065074-12065093 MS.gene041579:CDS 20.0%
!! GTATCTATTCTTGAAAATAT+TGG - chr8.4:12064993-12065012 MS.gene041579:CDS 20.0%
!! TAAAAAAGAAACACAGTTAA+AGG + chr8.4:12066164-12066183 None:intergenic 20.0%
!! TACAAAGATTATGTTTGATT+TGG - chr8.4:12063760-12063779 MS.gene041579:intron 20.0%
!! TACATCAAAATTATCATCTT+CGG - chr8.4:12066985-12067004 MS.gene041579:intron 20.0%
!! TAGTACTAGTAAAATAGTAA+CGG - chr8.4:12067202-12067221 MS.gene041579:CDS 20.0%
!! TAGTAGTTAAATTTCACAAA+TGG + chr8.4:12063524-12063543 None:intergenic 20.0%
!! TATCAAGCAAAAAGATTAAA+CGG + chr8.4:12063357-12063376 None:intergenic 20.0%
!! TTTCTTAATATATTTGAAGG+GGG - chr8.4:12064640-12064659 MS.gene041579:intron 20.0%
!!! AACTAACTTTGAAGTAAATT+CGG + chr8.4:12062729-12062748 None:intergenic 20.0%
!!! ATTAGTTTTTAAGCCTTTTA+AGG + chr8.4:12064872-12064891 None:intergenic 20.0%
!!! CCTTTTATAGATTTATTACA+TGG - chr8.4:12067259-12067278 MS.gene041579:CDS 20.0%
!!! TATCTTTGAAATTTGTTATC+AGG - chr8.4:12067364-12067383 MS.gene041579:CDS 20.0%
!!! TTAAATACAAGTTTGTTATC+TGG - chr8.4:12063060-12063079 MS.gene041579:intron 20.0%
!!! TTAGTTTTTAAGCCTTTTAA+GGG + chr8.4:12064871-12064890 None:intergenic 20.0%
! AAAAAGAAACACAGTTAAAG+GGG + chr8.4:12066162-12066181 None:intergenic 25.0%
! AATAACGGTTTAAACAAACT+TGG + chr8.4:12064941-12064960 None:intergenic 25.0%
! AATGTATGAGATGAAAGTTT+AGG + chr8.4:12063811-12063830 None:intergenic 25.0%
! ACATCAAAATTATCATCTTC+GGG - chr8.4:12066986-12067005 MS.gene041579:intron 25.0%
! ATAATTTAGATAGGAAAACG+AGG - chr8.4:12062975-12062994 MS.gene041579:intron 25.0%
! ATGTTACATATCCAAATAGA+GGG + chr8.4:12066613-12066632 None:intergenic 25.0%
! ATTTAGGAACCTTATAAAGA+TGG + chr8.4:12066664-12066683 None:intergenic 25.0%
! ATTTCATTATATCTGAGCTA+TGG - chr8.4:12063446-12063465 MS.gene041579:intron 25.0%
! CATAATCATAACAATATACC+TGG - chr8.4:12065302-12065321 MS.gene041579:CDS 25.0%
! CATTGCATTAACAACTATAT+CGG + chr8.4:12062444-12062463 None:intergenic 25.0%
! GATATAGTTGTTAATGCAAT+GGG - chr8.4:12062443-12062462 MS.gene041579:intron 25.0%
! GATGTAATAAAACATTACCA+AGG + chr8.4:12066971-12066990 None:intergenic 25.0%
! GTAGTTAAATTTCACAAATG+GGG + chr8.4:12063522-12063541 None:intergenic 25.0%
! TAATCATAACAATATACCTG+GGG - chr8.4:12065304-12065323 MS.gene041579:CDS 25.0%
! TATTAATGATCATGCCTTTA+CGG + chr8.4:12063334-12063353 None:intergenic 25.0%
! TATTATCATTAAGTTTAGGG+TGG + chr8.4:12063217-12063236 None:intergenic 25.0%
! TATTCAAATCATAACCGTAA+AGG - chr8.4:12063317-12063336 MS.gene041579:intron 25.0%
! TTTAGGAACCTTATAAAGAT+GGG + chr8.4:12066663-12066682 None:intergenic 25.0%
!! ACAAAATCAACTTTTGTCAT+CGG + chr8.4:12062702-12062721 None:intergenic 25.0%
!! ACTACTACTGTATACATTTT+TGG - chr8.4:12063537-12063556 MS.gene041579:intron 25.0%
!! ATATACGGATTACATTATTC+AGG + chr8.4:12062624-12062643 None:intergenic 25.0%
!! CTACTACTGTATACATTTTT+GGG - chr8.4:12063538-12063557 MS.gene041579:intron 25.0%
!! TATACGGATTACATTATTCA+GGG + chr8.4:12062623-12062642 None:intergenic 25.0%
!! TTCTGGTTATGTTTCTTTAT+AGG - chr8.4:12066468-12066487 MS.gene041579:CDS 25.0%
!! TTTATTTGTTCTGAATCTTC+AGG - chr8.4:12066899-12066918 MS.gene041579:intron 25.0%
!! TTTTCTAATGCTTCATGAAA+AGG - chr8.4:12063951-12063970 MS.gene041579:CDS 25.0%
!!! ATTTCAATAATTTTGACACG+AGG + chr8.4:12062564-12062583 None:intergenic 25.0%
!!! TAGTTTTTAAGCCTTTTAAG+GGG + chr8.4:12064870-12064889 None:intergenic 25.0%
!!! TATGTTGTTGTTTACATTGA+TGG - chr8.4:12063282-12063301 MS.gene041579:intron 25.0%
AAATACTAACATGTGTCCTA+AGG - chr8.4:12066492-12066511 MS.gene041579:CDS 30.0%
AAATCAATCATGTGGCATAT+AGG - chr8.4:12065039-12065058 MS.gene041579:CDS 30.0%
AAATGGTTCACAACAAACAT+TGG + chr8.4:12066110-12066129 None:intergenic 30.0%
AAATGTTAGACCTTACATCA+TGG - chr8.4:12067339-12067358 MS.gene041579:CDS 30.0%
AACATACCATTGGTATAGAA+TGG - chr8.4:12065747-12065766 MS.gene041579:intron 30.0%
AATACTAACATGTGTCCTAA+GGG - chr8.4:12066493-12066512 MS.gene041579:CDS 30.0%
AATCATAACAATATACCTGG+GGG - chr8.4:12065305-12065324 MS.gene041579:CDS 30.0%
AATGAAACAAGGAATGATTG+TGG + chr8.4:12062531-12062550 None:intergenic 30.0%
AATGGTTCACAACAAACATT+GGG + chr8.4:12066109-12066128 None:intergenic 30.0%
AATTCTGCAAATCAATCATG+TGG - chr8.4:12065031-12065050 MS.gene041579:CDS 30.0%
ACATACCATTGGTATAGAAT+GGG - chr8.4:12065748-12065767 MS.gene041579:intron 30.0%
ACATTTCTGATTCCAATCAA+CGG - chr8.4:12064233-12064252 MS.gene041579:CDS 30.0%
ACCATTCAGATAACAACAAT+AGG - chr8.4:12064449-12064468 MS.gene041579:CDS 30.0%
AGAAGGATTACCAAATCTAA+TGG + chr8.4:12065977-12065996 None:intergenic 30.0%
AGCTTAGTACTCACAAATTT+AGG + chr8.4:12066680-12066699 None:intergenic 30.0%
ATAATTGAACTTCCAGAAGA+GGG + chr8.4:12066204-12066223 None:intergenic 30.0%
ATATGTAACATGTTCCCTTA+AGG - chr8.4:12066622-12066641 MS.gene041579:intron 30.0%
ATGTTCTTGTATGTAAGATC+CGG + chr8.4:12065285-12065304 None:intergenic 30.0%
ATTCATTCTGATAACACCAA+GGG - chr8.4:12064070-12064089 MS.gene041579:CDS 30.0%
CAAAGATATACCATGATGTA+AGG + chr8.4:12067352-12067371 None:intergenic 30.0%
CAAATTGAAGGTTTCAATTC+CGG - chr8.4:12062410-12062429 MS.gene041579:intron 30.0%
CAACAGTTCTTCTATATCAT+TGG - chr8.4:12065778-12065797 MS.gene041579:intron 30.0%
CATGTTACATATCCAAATAG+AGG + chr8.4:12066614-12066633 None:intergenic 30.0%
CGATATAGTTGTTAATGCAA+TGG - chr8.4:12062442-12062461 MS.gene041579:intron 30.0%
CTTCATGAAAAGGTTTGAAT+TGG - chr8.4:12063961-12063980 MS.gene041579:CDS 30.0%
GAGTCTTAAAAGTGATCTAA+AGG - chr8.4:12064150-12064169 MS.gene041579:CDS 30.0%
GATAGAGAGAAAATGAAACA+AGG + chr8.4:12062542-12062561 None:intergenic 30.0%
GTAAAAATGCAAACTGCTTA+TGG + chr8.4:12065250-12065269 None:intergenic 30.0%
GTGTATCATTACATCTATGT+AGG - chr8.4:12063402-12063421 MS.gene041579:intron 30.0%
TAACCACAAAACCCAAATAA+AGG + chr8.4:12063901-12063920 None:intergenic 30.0%
TCAAGAATAGATACTTCTTG+AGG + chr8.4:12064987-12065006 None:intergenic 30.0%
TGATAACAATGTTAATGACG+AGG - chr8.4:12063157-12063176 MS.gene041579:intron 30.0%
TGCTTACATTGTAACTAAGA+AGG + chr8.4:12065994-12066013 None:intergenic 30.0%
TGTAAAATAGTCAAGAGTCA+TGG + chr8.4:12066266-12066285 None:intergenic 30.0%
TTCAGATAACAACAATAGGT+TGG - chr8.4:12064453-12064472 MS.gene041579:CDS 30.0%
! AAACAAACTTGGTCTGTTTT+AGG + chr8.4:12064930-12064949 None:intergenic 30.0%
! AACAAACTTGGTCTGTTTTA+GGG + chr8.4:12064929-12064948 None:intergenic 30.0%
! AAGCAGTTTGCATTTTTACA+TGG - chr8.4:12065251-12065270 MS.gene041579:CDS 30.0%
! ACCTATTGTTGTTATCTGAA+TGG + chr8.4:12064453-12064472 None:intergenic 30.0%
! ATACGGATTACATTATTCAG+GGG + chr8.4:12062622-12062641 None:intergenic 30.0%
! ATTTTGCAGTGTAAGTTTTG+AGG - chr8.4:12066737-12066756 MS.gene041579:intron 30.0%
! CTTCATGATGTGTGTAATTT+TGG - chr8.4:12062648-12062667 MS.gene041579:intron 30.0%
! GATAGTTTGAATGATAATGC+AGG - chr8.4:12067043-12067062 MS.gene041579:intron 30.0%
! TCTTTTTGACATTACTGCTT+TGG - chr8.4:12065119-12065138 MS.gene041579:CDS 30.0%
!! AGTTTTTAAGCCTTTTAAGG+GGG + chr8.4:12064869-12064888 None:intergenic 30.0%
!! ATTGTTATCATCGATTTGCA+GGG + chr8.4:12063147-12063166 None:intergenic 30.0%
!! CTTCTTGCTTTTACTATTTC+TGG - chr8.4:12066451-12066470 MS.gene041579:CDS 30.0%
!! TGTATCATTGGCCTTTATTT+GGG - chr8.4:12063887-12063906 MS.gene041579:CDS 30.0%
!!! TACATTTTTGGGTCAGTTAT+TGG - chr8.4:12063549-12063568 MS.gene041579:intron 30.0%
AACACAAAGGGAACAAGAAA+TGG - chr8.4:12065658-12065677 MS.gene041579:CDS 35.0%
AACCAAGATTATGGCATTCA+TGG - chr8.4:12063605-12063624 MS.gene041579:intron 35.0%
AACTATATCGGAAAAAGAGC+CGG + chr8.4:12062432-12062451 None:intergenic 35.0%
AAGCTGTAAATGATGGTCTA+TGG - chr8.4:12064743-12064762 MS.gene041579:intron 35.0%
AATCTCCAAGCTCAACTAAA+AGG + chr8.4:12064192-12064211 None:intergenic 35.0%
AATTCATTGTCTGATCCAGA+CGG - chr8.4:12064334-12064353 MS.gene041579:CDS 35.0%
AATTTGAACATGTTCGCAGA+GGG + chr8.4:12062396-12062415 None:intergenic 35.0%
ACACAAAGGGAACAAGAAAT+GGG - chr8.4:12065659-12065678 MS.gene041579:CDS 35.0%
ACATACAGAGCTAACACAAA+GGG - chr8.4:12065646-12065665 MS.gene041579:CDS 35.0%
ACCAAGATTATGGCATTCAT+GGG - chr8.4:12063606-12063625 MS.gene041579:intron 35.0%
AGAATAGATACTTCTTGAGG+AGG + chr8.4:12064984-12065003 None:intergenic 35.0%
ATAACCTGAAACATGAACTG+CGG + chr8.4:12062502-12062521 None:intergenic 35.0%
ATGCATTCAGGAAATAGCAA+TGG + chr8.4:12066335-12066354 None:intergenic 35.0%
ATGGTTCACAACAAACATTG+GGG + chr8.4:12066108-12066127 None:intergenic 35.0%
ATTCTCCCATTCTATACCAA+TGG + chr8.4:12065756-12065775 None:intergenic 35.0%
ATTGCCTTGGCATATCTTTA+TGG - chr8.4:12063188-12063207 MS.gene041579:intron 35.0%
CAAGACTATATCCCTCTATT+TGG - chr8.4:12066599-12066618 MS.gene041579:intron 35.0%
CATTCATTCTGATAACACCA+AGG - chr8.4:12064069-12064088 MS.gene041579:CDS 35.0%
CATTTCTGATTCCAATCAAC+GGG - chr8.4:12064234-12064253 MS.gene041579:CDS 35.0%
CTTGCTAACAAGTTCCTTAA+GGG + chr8.4:12066639-12066658 None:intergenic 35.0%
GACAATGAATTACCCAATGA+AGG + chr8.4:12064325-12064344 None:intergenic 35.0%
GAGAACATCATGTTATGTTG+AGG - chr8.4:12064360-12064379 MS.gene041579:CDS 35.0%
GATAATTGAACTTCCAGAAG+AGG + chr8.4:12066205-12066224 None:intergenic 35.0%
GATTACATTATTCAGGGGAA+CGG + chr8.4:12062617-12062636 None:intergenic 35.0%
GTAAACAACAACATACCTGA+AGG + chr8.4:12063277-12063296 None:intergenic 35.0%
TAATTGAACTTCCAGAAGAG+GGG + chr8.4:12066203-12066222 None:intergenic 35.0%
TACATACAGAGCTAACACAA+AGG - chr8.4:12065645-12065664 MS.gene041579:CDS 35.0%
TAGCAAGACCCATCTTTATA+AGG - chr8.4:12066652-12066671 MS.gene041579:intron 35.0%
TATGTTGCTGAATCTTCTAC+AGG - chr8.4:12065341-12065360 MS.gene041579:CDS 35.0%
TCAATTATTTGGGCCTAAGT+TGG - chr8.4:12067141-12067160 MS.gene041579:intron 35.0%
TCATCTCTATAGTTTCCTCT+GGG + chr8.4:12064610-12064629 None:intergenic 35.0%
TCTATACCAATGGTATGTTC+TGG + chr8.4:12065746-12065765 None:intergenic 35.0%
TCTTCTACAGGTGAAAGAAA+TGG - chr8.4:12065353-12065372 MS.gene041579:CDS 35.0%
TCTTGCTAACAAGTTCCTTA+AGG + chr8.4:12066640-12066659 None:intergenic 35.0%
TGCGAACATGTTCAAATTGA+AGG - chr8.4:12062398-12062417 MS.gene041579:intron 35.0%
TGGAAGTTCAATTATCTGCT+TGG - chr8.4:12066209-12066228 MS.gene041579:CDS 35.0%
TGGTGTCTCTAACAATTGTA+CGG + chr8.4:12065726-12065745 None:intergenic 35.0%
TTATCTGGTGTTTGTGATTC+AGG - chr8.4:12063075-12063094 MS.gene041579:intron 35.0%
TTCAAACTTCTTGGCTTATC+AGG - chr8.4:12063471-12063490 MS.gene041579:intron 35.0%
TTCATCTCTATAGTTTCCTC+TGG + chr8.4:12064611-12064630 None:intergenic 35.0%
TTGCCTTGGCATATCTTTAT+GGG - chr8.4:12063189-12063208 MS.gene041579:intron 35.0%
TTGGATCATTGTTATCGGAA+TGG + chr8.4:12062334-12062353 None:intergenic 35.0%
TTTCATCGAGTTCTTGTAGT+GGG - chr8.4:12064500-12064519 MS.gene041579:intron 35.0%
! AAGATGTTGGAAACTGACTT+GGG - chr8.4:12064121-12064140 MS.gene041579:CDS 35.0%
! CATGACTTTTTATGCATACG+AGG + chr8.4:12066084-12066103 None:intergenic 35.0%
! CGAAAAGTGTAACATGTCAT+TGG + chr8.4:12064900-12064919 None:intergenic 35.0%
! GAAGTGTTTAAGTGCATGTT+TGG - chr8.4:12062672-12062691 MS.gene041579:intron 35.0%
! TGGATTCAAGTTTGGTGAAA+TGG + chr8.4:12064278-12064297 None:intergenic 35.0%
! TTTTCATCGAGTTCTTGTAG+TGG - chr8.4:12064499-12064518 MS.gene041579:intron 35.0%
! TTTTTACATGGATCTACCAC+CGG - chr8.4:12065263-12065282 MS.gene041579:CDS 35.0%
!! ACAAACTTGGTCTGTTTTAG+GGG + chr8.4:12064928-12064947 None:intergenic 35.0%
!! AGGAAAACGAAAAGTGTTAG+GGG + chr8.4:12064964-12064983 None:intergenic 35.0%
!! ATGTTAGAGGTGCTATTGAT+GGG - chr8.4:12065399-12065418 MS.gene041579:CDS 35.0%
!! ATTGCTATTTCCTGAATGCA+TGG - chr8.4:12066334-12066353 MS.gene041579:intron 35.0%
!! CATTGTTATCATCGATTTGC+AGG + chr8.4:12063148-12063167 None:intergenic 35.0%
!! GAAAAGTGTTAGGGGAATAA+CGG + chr8.4:12064956-12064975 None:intergenic 35.0%
!! GAGGAAAACGAAAAGTGTTA+GGG + chr8.4:12064965-12064984 None:intergenic 35.0%
!! GTGTATCATTGGCCTTTATT+TGG - chr8.4:12063886-12063905 MS.gene041579:CDS 35.0%
!!! TTTTCTATGCTGGTTCTTTG+TGG - chr8.4:12066805-12066824 MS.gene041579:intron 35.0%
AAAAAAAAAGGTCGCTTGCG+TGG + chr8.4:12067236-12067255 None:intergenic 40.0%
AACCAAGTGCTTGCTTCATT+TGG - chr8.4:12063703-12063722 MS.gene041579:intron 40.0%
AACTACATTTGTTCCTGCAG+CGG - chr8.4:12065442-12065461 MS.gene041579:CDS 40.0%
AAGATTGAACATCCTGCACA+TGG - chr8.4:12064019-12064038 MS.gene041579:CDS 40.0%
ACAGTTAAAGGGGAACAAGA+GGG + chr8.4:12066152-12066171 None:intergenic 40.0%
ACCTGCCTTACAATTCAAGT+GGG - chr8.4:12066360-12066379 MS.gene041579:intron 40.0%
ACGTGCTTCTGAATCATCAT+TGG + chr8.4:12065543-12065562 None:intergenic 40.0%
AGAAAGCAGCTTGAAGAGAT+AGG - chr8.4:12064709-12064728 MS.gene041579:intron 40.0%
AGAAGCGGTAAGTGTATCAT+TGG - chr8.4:12063875-12063894 MS.gene041579:CDS 40.0%
ATTCATTGTCTGATCCAGAC+GGG - chr8.4:12064335-12064354 MS.gene041579:CDS 40.0%
ATTCCTTGACATTTGCCCTT+AGG + chr8.4:12066511-12066530 None:intergenic 40.0%
CAAGATGTTGGAAACTGACT+TGG - chr8.4:12064120-12064139 MS.gene041579:CDS 40.0%
CAATTTGAACATGTTCGCAG+AGG + chr8.4:12062397-12062416 None:intergenic 40.0%
CAGGAACAAATGTAGTTCCA+CGG + chr8.4:12065439-12065458 None:intergenic 40.0%
CCAAGATTATGGCATTCATG+GGG - chr8.4:12063607-12063626 MS.gene041579:intron 40.0%
CCAAGCTCAACTAAAAGGTT+AGG + chr8.4:12064187-12064206 None:intergenic 40.0%
CCATCATTTACAGCTTTGCA+AGG + chr8.4:12064739-12064758 None:intergenic 40.0%
CCTTGCAAAGCTGTAAATGA+TGG - chr8.4:12064736-12064755 MS.gene041579:intron 40.0%
CGAATCCCACTTGAATTGTA+AGG + chr8.4:12066368-12066387 None:intergenic 40.0%
CGAGAAAAGACAAATCGTGT+AGG + chr8.4:12065476-12065495 None:intergenic 40.0%
GAAAAGACAAATCGTGTAGG+AGG + chr8.4:12065473-12065492 None:intergenic 40.0%
GAACCAGCATAGAAAACTTC+TGG + chr8.4:12066801-12066820 None:intergenic 40.0%
GAATCTTCAGGTCAGTATTC+AGG - chr8.4:12066911-12066930 MS.gene041579:intron 40.0%
GACTGTTTACTAGGTGTTTG+CGG - chr8.4:12063580-12063599 MS.gene041579:intron 40.0%
GAGCGACAAGTAGAGAAAAA+TGG + chr8.4:12066127-12066146 None:intergenic 40.0%
GAGGGTTGTTTGGATATTGA+GGG + chr8.4:12062256-12062275 None:intergenic 40.0%
GATATGGAAGGACCTTCATT+GGG - chr8.4:12064310-12064329 MS.gene041579:CDS 40.0%
GCTATGGACTTCAAACTTCT+TGG - chr8.4:12063462-12063481 MS.gene041579:intron 40.0%
GGCATATAGGTCACAATACT+TGG - chr8.4:12065052-12065071 MS.gene041579:CDS 40.0%
GGTGGTTGGATCATTGTTAT+CGG + chr8.4:12062339-12062358 None:intergenic 40.0%
GGTGTCTCTAACAATTGTAC+GGG + chr8.4:12065725-12065744 None:intergenic 40.0%
GTTCCCATAAAGATATGCCA+AGG + chr8.4:12063195-12063214 None:intergenic 40.0%
GTTGTTATCTGAATGGTAGC+AGG + chr8.4:12064446-12064465 None:intergenic 40.0%
TAACCTGAAACATGAACTGC+GGG + chr8.4:12062501-12062520 None:intergenic 40.0%
TAAGACGATCTTGACTGTCT+TGG - chr8.4:12066865-12066884 MS.gene041579:intron 40.0%
TACTGACCTCTAATGATCTG+TGG - chr8.4:12063839-12063858 MS.gene041579:CDS 40.0%
TCAGATGCTTCTTAGTCAGA+GGG - chr8.4:12065163-12065182 MS.gene041579:CDS 40.0%
TCCATATCACAAGGATACGA+TGG + chr8.4:12064298-12064317 None:intergenic 40.0%
TCCATCGTATCCTTGTGATA+TGG - chr8.4:12064294-12064313 MS.gene041579:CDS 40.0%
TCGTATCCTTGTGATATGGA+AGG - chr8.4:12064298-12064317 MS.gene041579:CDS 40.0%
TCTGATAACACCAAGGGAAA+AGG - chr8.4:12064076-12064095 MS.gene041579:CDS 40.0%
TGACTTACCCAAAGCGAAAA+GGG + chr8.4:12065832-12065851 None:intergenic 40.0%
TGAGAACTTACACACTCTCT+TGG - chr8.4:12066233-12066252 MS.gene041579:CDS 40.0%
TGATATGGAAGGACCTTCAT+TGG - chr8.4:12064309-12064328 MS.gene041579:CDS 40.0%
TGATTCAGGAACATGCTTCA+TGG - chr8.4:12063089-12063108 MS.gene041579:intron 40.0%
TTACACACTCTCTTGGAAGA+TGG - chr8.4:12066240-12066259 MS.gene041579:intron 40.0%
TTATCGGAATGGTGAGATGA+TGG + chr8.4:12062323-12062342 None:intergenic 40.0%
TTCAGATGCTTCTTAGTCAG+AGG - chr8.4:12065162-12065181 MS.gene041579:CDS 40.0%
TTCTTGTATGTAAGATCCGG+TGG + chr8.4:12065282-12065301 None:intergenic 40.0%
TTGCTAGTTATCTTGTGAGC+TGG - chr8.4:12065901-12065920 MS.gene041579:intron 40.0%
TTTAATGATGAAGACCCCCA+GGG - chr8.4:12066936-12066955 MS.gene041579:intron 40.0%
TTTGCGGAGAACCAAGATTA+TGG - chr8.4:12063596-12063615 MS.gene041579:intron 40.0%
! AAGGGAAAAGGTATAGCTGA+TGG - chr8.4:12064088-12064107 MS.gene041579:CDS 40.0%
! ATCAGCTATACCTTTTCCCT+TGG + chr8.4:12064089-12064108 None:intergenic 40.0%
! ATGGATTGACAGCTTTAGTC+GGG - chr8.4:12065591-12065610 MS.gene041579:CDS 40.0%
! ATGGCTCTTTTAGACCTGTA+CGG - chr8.4:12065372-12065391 MS.gene041579:CDS 40.0%
! CTTTCGTTTTCCCCCTTAAA+AGG - chr8.4:12064856-12064875 MS.gene041579:intron 40.0%
! GGATACGATGGATTCAAGTT+TGG + chr8.4:12064286-12064305 None:intergenic 40.0%
! TCTCCAGAAGTTTTCTATGC+TGG - chr8.4:12066795-12066814 MS.gene041579:intron 40.0%
! TTTTAATGATGAAGACCCCC+AGG - chr8.4:12066935-12066954 MS.gene041579:intron 40.0%
!! AGATGTTGGAAACTGACTTG+GGG - chr8.4:12064122-12064141 MS.gene041579:CDS 40.0%
!! CATGTTAGAGGTGCTATTGA+TGG - chr8.4:12065398-12065417 MS.gene041579:CDS 40.0%
!! CCTAACCTTTTAGTTGAGCT+TGG - chr8.4:12064184-12064203 MS.gene041579:CDS 40.0%
!! CTTGCTTCATTTGGTGGTTT+TGG - chr8.4:12063712-12063731 MS.gene041579:intron 40.0%
!! GATGGATTGACAGCTTTAGT+CGG - chr8.4:12065590-12065609 MS.gene041579:CDS 40.0%
!! GGAGGAAAACGAAAAGTGTT+AGG + chr8.4:12064966-12064985 None:intergenic 40.0%
!! TGGCCTTTATTTGGGTTTTG+TGG - chr8.4:12063895-12063914 MS.gene041579:CDS 40.0%
!! TGTAGTGGGTCCATTAGATT+TGG - chr8.4:12065964-12065983 MS.gene041579:intron 40.0%
!!! TAAGTTTTGAGGAAGTGCAC+AGG - chr8.4:12066748-12066767 MS.gene041579:intron 40.0%
AAAGGGGGGAAATGGCTTAA+AGG + chr8.4:12065815-12065834 None:intergenic 45.0%
AAATGATGGTCTATGGCTGC+AGG - chr8.4:12064750-12064769 MS.gene041579:intron 45.0%
AATGGGGCTATACAAGCATC+TGG + chr8.4:12063506-12063525 None:intergenic 45.0%
ACATACCTGAAGGTCGAGAA+AGG + chr8.4:12063267-12063286 None:intergenic 45.0%
ACCACACTAGAAGCTTGTAG+TGG - chr8.4:12065949-12065968 MS.gene041579:intron 45.0%
ACTACAAGCTTCTAGTGTGG+TGG + chr8.4:12065950-12065969 None:intergenic 45.0%
ACTTACCCAAAGCGAAAAGG+GGG + chr8.4:12065830-12065849 None:intergenic 45.0%
ACTTACCGCTTCTCTTCACA+GGG + chr8.4:12063868-12063887 None:intergenic 45.0%
AGCGTGTTAGAACTGCTTGT+TGG - chr8.4:12063630-12063649 MS.gene041579:intron 45.0%
ATGGAACCCCTTTGCTTTCA+TGG - chr8.4:12064548-12064567 MS.gene041579:intron 45.0%
CAAGTGCTTGCTTCATTTGG+TGG - chr8.4:12063706-12063725 MS.gene041579:intron 45.0%
CACAGTTAAAGGGGAACAAG+AGG + chr8.4:12066153-12066172 None:intergenic 45.0%
CACCAAATGAAGCAAGCACT+TGG + chr8.4:12063708-12063727 None:intergenic 45.0%
CACCTGCCTTACAATTCAAG+TGG - chr8.4:12066359-12066378 MS.gene041579:intron 45.0%
CAGAGATAACTGATGTGCAC+AGG - chr8.4:12067089-12067108 MS.gene041579:intron 45.0%
CATAACAATATACCTGGGGG+TGG - chr8.4:12065308-12065327 MS.gene041579:CDS 45.0%
CCACACTAGAAGCTTGTAGT+GGG - chr8.4:12065950-12065969 MS.gene041579:intron 45.0%
CCCCATGAATGCCATAATCT+TGG + chr8.4:12063610-12063629 None:intergenic 45.0%
CTGACTTACCCAAAGCGAAA+AGG + chr8.4:12065833-12065852 None:intergenic 45.0%
GAAGGTCCTTCCATATCACA+AGG + chr8.4:12064307-12064326 None:intergenic 45.0%
GACTTACCCAAAGCGAAAAG+GGG + chr8.4:12065831-12065850 None:intergenic 45.0%
GAGACACCAGAACATACCAT+TGG - chr8.4:12065737-12065756 MS.gene041579:intron 45.0%
GAGACGATGAAGGTGATAAG+TGG + chr8.4:12062471-12062490 None:intergenic 45.0%
GATAACTGATGTGCACAGGA+AGG - chr8.4:12067093-12067112 MS.gene041579:intron 45.0%
GCGTGTTAGAACTGCTTGTT+GGG - chr8.4:12063631-12063650 MS.gene041579:intron 45.0%
GGAGGGTTGTTTGGATATTG+AGG + chr8.4:12062257-12062276 None:intergenic 45.0%
GGGTATCCACAGATCATTAG+AGG + chr8.4:12063848-12063867 None:intergenic 45.0%
GTTGAGCTTGGAGATTCAGA+AGG - chr8.4:12064196-12064215 MS.gene041579:CDS 45.0%
GTTGTGTGGGACTGTTTACT+AGG - chr8.4:12063571-12063590 MS.gene041579:intron 45.0%
TATATATTTCCACCACCCCC+AGG + chr8.4:12065323-12065342 None:intergenic 45.0%
TCCAGTGAATGGGGAAGATA+TGG - chr8.4:12064529-12064548 MS.gene041579:intron 45.0%
TCCATATCTTCCCCATTCAC+TGG + chr8.4:12064533-12064552 None:intergenic 45.0%
TCCCACTTGAATTGTAAGGC+AGG + chr8.4:12066364-12066383 None:intergenic 45.0%
TGACCTGTCTTCTGCCTATA+TGG + chr8.4:12064579-12064598 None:intergenic 45.0%
TGGAACCCCTTTGCTTTCAT+GGG - chr8.4:12064549-12064568 MS.gene041579:intron 45.0%
TGGAGTTGAGAGAGGTAACA+AGG - chr8.4:12063678-12063697 MS.gene041579:intron 45.0%
TGGCTGCACTAACAAGATGT+TGG - chr8.4:12064108-12064127 MS.gene041579:CDS 45.0%
TGTCCTAAGGGCAAATGTCA+AGG - chr8.4:12066505-12066524 MS.gene041579:CDS 45.0%
TTCATTGTCTGATCCAGACG+GGG - chr8.4:12064336-12064355 MS.gene041579:CDS 45.0%
TTGAATCATCTCCCCTCTTC+TGG - chr8.4:12066189-12066208 MS.gene041579:CDS 45.0%
TTGTTCCATAATTCCCTCCC+TGG + chr8.4:12065622-12065641 None:intergenic 45.0%
TTTCTGTTGCCAACGCCAAA+TGG + chr8.4:12065503-12065522 None:intergenic 45.0%
! AGCAAGTTGAACCCGTTGAT+TGG + chr8.4:12064248-12064267 None:intergenic 45.0%
! ATCGAGAGCACGTAATTCAG+CGG + chr8.4:12062360-12062379 None:intergenic 45.0%
! ATTGTTTCTTCACCGTCGGA+AGG - chr8.4:12067066-12067085 MS.gene041579:intron 45.0%
! ATTTCCCCCCTTTTCGCTTT+GGG - chr8.4:12065822-12065841 MS.gene041579:CDS 45.0%
! CAGGATTGTTTCTTCACCGT+CGG - chr8.4:12067062-12067081 MS.gene041579:intron 45.0%
! CGTGTTAGAACTGCTTGTTG+GGG - chr8.4:12063632-12063651 MS.gene041579:intron 45.0%
! GGGTCAGTTATTGGTTGTGT+GGG - chr8.4:12063558-12063577 MS.gene041579:intron 45.0%
! TGGCAACATTCACTTGTTGC+AGG - chr8.4:12063780-12063799 MS.gene041579:intron 45.0%
! TGGCTCTTTTAGACCTGTAC+GGG - chr8.4:12065373-12065392 MS.gene041579:CDS 45.0%
! TGGGTCAGTTATTGGTTGTG+TGG - chr8.4:12063557-12063576 MS.gene041579:intron 45.0%
! TGTTATGTTGAGGTGCCTCT+TGG - chr8.4:12064370-12064389 MS.gene041579:CDS 45.0%
!! ACTACTGGAGTGGGTATTGA+AGG - chr8.4:12064403-12064422 MS.gene041579:CDS 45.0%
!! ATGGGATTGCAAAGTACTGC+TGG - chr8.4:12065677-12065696 MS.gene041579:CDS 45.0%
!! ATTGATGGGCTTGCAGGTAT+TGG - chr8.4:12065413-12065432 MS.gene041579:CDS 45.0%
!! ATTGGCTTTCCACACATTCC+TGG - chr8.4:12063979-12063998 MS.gene041579:CDS 45.0%
!! CACTTTTTGCCAGGAATGTG+TGG + chr8.4:12063991-12064010 None:intergenic 45.0%
!! CTACTGGAGTGGGTATTGAA+GGG - chr8.4:12064404-12064423 MS.gene041579:CDS 45.0%
!! CTATGCTGGTTCTTTGTGGA+AGG - chr8.4:12066809-12066828 MS.gene041579:intron 45.0%
!! GTATGTTGACTCGCGTGAAA+AGG - chr8.4:12067394-12067413 MS.gene041579:CDS 45.0%
!! GTCTTTTCTCGTGTGCCATT+TGG - chr8.4:12065485-12065504 MS.gene041579:CDS 45.0%
!! TGGGATTGCAAAGTACTGCT+GGG - chr8.4:12065678-12065697 MS.gene041579:CDS 45.0%
AACAATATACCTGGGGGTGG+TGG - chr8.4:12065311-12065330 MS.gene041579:CDS 50.0%
AATGGAGACCTGTCTGGAGA+TGG - chr8.4:12065572-12065591 MS.gene041579:CDS 50.0%
CAAAGCGAAAAGGGGGGAAA+TGG + chr8.4:12065823-12065842 None:intergenic 50.0%
CACTTACCGCTTCTCTTCAC+AGG + chr8.4:12063869-12063888 None:intergenic 50.0%
CAGTTATCTCTGCCTTCCGA+CGG + chr8.4:12067081-12067100 None:intergenic 50.0%
CATCCTGCACATGGAATTCC+TGG - chr8.4:12064028-12064047 MS.gene041579:CDS 50.0%
CCCACTACAAGCTTCTAGTG+TGG + chr8.4:12065953-12065972 None:intergenic 50.0%
CCTCTAACATGTACCCGTAC+AGG + chr8.4:12065389-12065408 None:intergenic 50.0%
CCTGTACGGGTACATGTTAG+AGG - chr8.4:12065386-12065405 MS.gene041579:CDS 50.0%
CGAGGCTATTGCAATTGCCT+TGG - chr8.4:12063175-12063194 MS.gene041579:intron 50.0%
CTGAAGGTCGAGAAAGGAAG+CGG + chr8.4:12063261-12063280 None:intergenic 50.0%
CTGTCAATCCATCTCCAGAC+AGG + chr8.4:12065583-12065602 None:intergenic 50.0%
CTTACCCAAAGCGAAAAGGG+GGG + chr8.4:12065829-12065848 None:intergenic 50.0%
CTTAGCCAGGGAGGGAATTA+TGG - chr8.4:12065614-12065633 MS.gene041579:CDS 50.0%
CTTTCATGGGGTGGCCATAT+AGG - chr8.4:12064562-12064581 MS.gene041579:intron 50.0%
GAACCAGGAATTCCATGTGC+AGG + chr8.4:12064034-12064053 None:intergenic 50.0%
GATCACAATGGAGACCTGTC+TGG - chr8.4:12065566-12065585 MS.gene041579:CDS 50.0%
GCTGGAACAACTACTGGAGT+GGG - chr8.4:12064394-12064413 MS.gene041579:CDS 50.0%
GGAACCCCTTTGCTTTCATG+GGG - chr8.4:12064550-12064569 MS.gene041579:intron 50.0%
GGATACCCTGTGAAGAGAAG+CGG - chr8.4:12063860-12063879 MS.gene041579:CDS 50.0%
GTAGTTGTTCCAGCACCAAG+AGG + chr8.4:12064388-12064407 None:intergenic 50.0%
GTTAAAGGGGAACAAGAGGG+AGG + chr8.4:12066149-12066168 None:intergenic 50.0%
TAGCAGGATCCTTCCTCAGA+AGG + chr8.4:12064430-12064449 None:intergenic 50.0%
TATTCAGGGGAACGGAAGAG+TGG + chr8.4:12062609-12062628 None:intergenic 50.0%
TCTCCCGCAGTTCATGTTTC+AGG - chr8.4:12062495-12062514 MS.gene041579:intron 50.0%
TGAAACATGAACTGCGGGAG+AGG + chr8.4:12062496-12062515 None:intergenic 50.0%
TGCTGGAACAACTACTGGAG+TGG - chr8.4:12064393-12064412 MS.gene041579:CDS 50.0%
TGGCCATATAGGCAGAAGAC+AGG - chr8.4:12064573-12064592 MS.gene041579:intron 50.0%
TGGGCTCACTTCCAGTGAAT+GGG - chr8.4:12064519-12064538 MS.gene041579:intron 50.0%
! AGATGATGGCTGCTTGGGAA+TGG + chr8.4:12062309-12062328 None:intergenic 50.0%
! ATGGTGAGATGATGGCTGCT+TGG + chr8.4:12062315-12062334 None:intergenic 50.0%
! ATTGAAGGGCCTTCTGAGGA+AGG - chr8.4:12064418-12064437 MS.gene041579:CDS 50.0%
! CATCATTGGCTGCAGACTGA+GGG + chr8.4:12065529-12065548 None:intergenic 50.0%
! CATTTCCCCCCTTTTCGCTT+TGG - chr8.4:12065821-12065840 MS.gene041579:CDS 50.0%
! CTTCTGGAGAATGCTTGACC+TGG + chr8.4:12066785-12066804 None:intergenic 50.0%
! GAAGCACGTGCTGATCACAA+TGG - chr8.4:12065554-12065573 MS.gene041579:CDS 50.0%
! TCATCATTGGCTGCAGACTG+AGG + chr8.4:12065530-12065549 None:intergenic 50.0%
! TGGTGAGATGATGGCTGCTT+GGG + chr8.4:12062314-12062333 None:intergenic 50.0%
! TTTGAGGAAGTGCACAGGCT+TGG - chr8.4:12066753-12066772 MS.gene041579:intron 50.0%
!! CTTGGTGCTGGAACAACTAC+TGG - chr8.4:12064388-12064407 MS.gene041579:CDS 50.0%
!! GGAATTCCTGGTTCTGAGTC+TGG - chr8.4:12064040-12064059 MS.gene041579:CDS 50.0%
!! GGATTGCAAAGTACTGCTGG+GGG - chr8.4:12065680-12065699 MS.gene041579:CDS 50.0%
!! GGGATTGCAAAGTACTGCTG+GGG - chr8.4:12065679-12065698 MS.gene041579:CDS 50.0%
!! TGCAGTGAGCACTTTTTGCC+AGG + chr8.4:12064000-12064019 None:intergenic 50.0%
ACCCCTTTGCTTTCATGGGG+TGG - chr8.4:12064553-12064572 MS.gene041579:intron 55.0%
AGGTCGCTTGCGTGGTAGTA+AGG + chr8.4:12067228-12067247 None:intergenic 55.0%
ATGATGAAGACCCCCAGGGA+CGG - chr8.4:12066940-12066959 MS.gene041579:intron 55.0%
CAGGGTCACAATAGCAGCAC+TGG + chr8.4:12063129-12063148 None:intergenic 55.0%
CAGGTCAAAGCTCATCCCAG+AGG - chr8.4:12064592-12064611 MS.gene041579:intron 55.0%
CATGATGTTCTCACCCCGTC+TGG + chr8.4:12064352-12064371 None:intergenic 55.0%
CCAGTTCCAGACTCAGAACC+AGG + chr8.4:12064049-12064068 None:intergenic 55.0%
CGCGTGAAAAGGTGACTGCA+CGG - chr8.4:12067405-12067424 MS.gene041579:CDS 55.0%
CGCTTCCTTTCTCGACCTTC+AGG - chr8.4:12063259-12063278 MS.gene041579:intron 55.0%
GATGGTCTATGGCTGCAGGT+TGG - chr8.4:12064754-12064773 MS.gene041579:intron 55.0%
GCACGTAATTCAGCGGTGGT+TGG + chr8.4:12062353-12062372 None:intergenic 55.0%
GCCACCCCATGAAAGCAAAG+GGG + chr8.4:12064557-12064576 None:intergenic 55.0%
GCTTTAGTCGGGCTTAGCCA+GGG - chr8.4:12065602-12065621 MS.gene041579:CDS 55.0%
GGAACATGCTTCATGGTCCC+TGG - chr8.4:12063096-12063115 MS.gene041579:intron 55.0%
GGCAGGTGTTCCATGCATTC+AGG + chr8.4:12066347-12066366 None:intergenic 55.0%
GGCCACCCCATGAAAGCAAA+GGG + chr8.4:12064558-12064577 None:intergenic 55.0%
GGCTACCTCTGTCAAAGTGG+CGG - chr8.4:12063653-12063672 MS.gene041579:intron 55.0%
GGGAGAGGATGAGACGATGA+AGG + chr8.4:12062481-12062500 None:intergenic 55.0%
GGGCTCACTTCCAGTGAATG+GGG - chr8.4:12064520-12064539 MS.gene041579:intron 55.0%
GGTGAAGGAGGAGGGTTGTT+TGG + chr8.4:12062266-12062285 None:intergenic 55.0%
GGTGATAGGGTGAAGGAGGA+GGG + chr8.4:12062274-12062293 None:intergenic 55.0%
GTGGGCTCACTTCCAGTGAA+TGG - chr8.4:12064518-12064537 MS.gene041579:intron 55.0%
TGGCCACCCCATGAAAGCAA+AGG + chr8.4:12064559-12064578 None:intergenic 55.0%
TGGGGCTACCTCTGTCAAAG+TGG - chr8.4:12063650-12063669 MS.gene041579:intron 55.0%
TGGTGATAGGGTGAAGGAGG+AGG + chr8.4:12062275-12062294 None:intergenic 55.0%
! AGCTTTAGTCGGGCTTAGCC+AGG - chr8.4:12065601-12065620 MS.gene041579:CDS 55.0%
! AGTGTGGTGGAAGAGTGAGC+TGG + chr8.4:12065937-12065956 None:intergenic 55.0%
! GAGAGCACGTAATTCAGCGG+TGG + chr8.4:12062357-12062376 None:intergenic 55.0%
! GTGTGGTGGAAGAGTGAGCT+GGG + chr8.4:12065936-12065955 None:intergenic 55.0%
!! AGCAGCACTGGCTTCTTTCC+AGG + chr8.4:12063117-12063136 None:intergenic 55.0%
!! CCTGGTTCTGAGTCTGGAAC+TGG - chr8.4:12064046-12064065 MS.gene041579:CDS 55.0%
!! CGTTGGTGATAGGGTGAAGG+AGG + chr8.4:12062278-12062297 None:intergenic 55.0%
!! CTGCGTTGGTGATAGGGTGA+AGG + chr8.4:12062281-12062300 None:intergenic 55.0%
!! GAAGCGCTGCGTTGGTGATA+GGG + chr8.4:12062287-12062306 None:intergenic 55.0%
!! GAAGTGCACAGGCTTGGTGA+TGG - chr8.4:12066759-12066778 MS.gene041579:intron 55.0%
!! GCAGCACTGGCTTCTTTCCA+GGG + chr8.4:12063116-12063135 None:intergenic 55.0%
!! GGGTATTGAAGGGCCTTCTG+AGG - chr8.4:12064414-12064433 MS.gene041579:CDS 55.0%
!! GGTGCTATTGATGGGCTTGC+AGG - chr8.4:12065407-12065426 MS.gene041579:CDS 55.0%
!! TCTCGTGTGCCATTTGGCGT+TGG - chr8.4:12065491-12065510 MS.gene041579:CDS 55.0%
CATGTTCGCAGAGGGAAGCG+AGG + chr8.4:12062388-12062407 None:intergenic 60.0%
CCTCTGTCAAAGTGGCGGCA+TGG - chr8.4:12063658-12063677 MS.gene041579:intron 60.0%
CGAGAAAGGAAGCGGCAGCA+AGG + chr8.4:12063253-12063272 None:intergenic 60.0%
TAGTCGGGCTTAGCCAGGGA+GGG - chr8.4:12065606-12065625 MS.gene041579:CDS 60.0%
TGGCGGCATGGAGTTGAGAG+AGG - chr8.4:12063670-12063689 MS.gene041579:intron 60.0%
TTAGTCGGGCTTAGCCAGGG+AGG - chr8.4:12065605-12065624 MS.gene041579:CDS 60.0%
! ACTGCTGGGGGTGCAAGTAC+TGG - chr8.4:12065692-12065711 MS.gene041579:intron 60.0%
! CCATGCCGCCACTTTGACAG+AGG + chr8.4:12063661-12063680 None:intergenic 60.0%
! GTTGAGGTGCCTCTTGGTGC+TGG - chr8.4:12064376-12064395 MS.gene041579:CDS 60.0%
!! GGAAGCGCTGCGTTGGTGAT+AGG + chr8.4:12062288-12062307 None:intergenic 60.0%
!! TGGGAATGGAAGCGCTGCGT+TGG + chr8.4:12062295-12062314 None:intergenic 60.0%
GTAGGAGGTGAAGCCGCTGC+AGG + chr8.4:12065458-12065477 None:intergenic 65.0%
!! GCACAGGCTTGGTGATGGCC+AGG - chr8.4:12066764-12066783 MS.gene041579:intron 65.0%
!! GCTGGGGGTGCAAGTACTGG+TGG - chr8.4:12065695-12065714 MS.gene041579:intron 65.0%
!! GGGCTTGCAGGTATTGGCCG+TGG - chr8.4:12065419-12065438 MS.gene041579:CDS 65.0%
! ACCAAGGGTGCGCCGTCCCT+GGG + chr8.4:12066955-12066974 None:intergenic 70.0%
! TACCAAGGGTGCGCCGTCCC+TGG + chr8.4:12066956-12066975 None:intergenic 70.0%
! CAAGGGTGCGCCGTCCCTGG+GGG + chr8.4:12066953-12066972 None:intergenic 75.0%
! CCAAGGGTGCGCCGTCCCTG+GGG + chr8.4:12066954-12066973 None:intergenic 75.0%
! CCCCAGGGACGGCGCACCCT+TGG - chr8.4:12066951-12066970 MS.gene041579:intron 80.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 12062245 12067433 12062245 ID=MS.gene041579
chr8.4 mRNA 12062245 12067433 12062245 ID=MS.gene041579.t1;Parent=MS.gene041579
chr8.4 exon 12067162 12067433 12067162 ID=MS.gene041579.t1.exon1;Parent=MS.gene041579.t1
chr8.4 CDS 12067162 12067433 12067162 ID=cds.MS.gene041579.t1;Parent=MS.gene041579.t1
chr8.4 exon 12066398 12066581 12066398 ID=MS.gene041579.t1.exon2;Parent=MS.gene041579.t1
chr8.4 CDS 12066398 12066581 12066398 ID=cds.MS.gene041579.t1;Parent=MS.gene041579.t1
chr8.4 exon 12066186 12066254 12066186 ID=MS.gene041579.t1.exon3;Parent=MS.gene041579.t1
chr8.4 CDS 12066186 12066254 12066186 ID=cds.MS.gene041579.t1;Parent=MS.gene041579.t1
chr8.4 exon 12065987 12066085 12065987 ID=MS.gene041579.t1.exon4;Parent=MS.gene041579.t1
chr8.4 CDS 12065987 12066085 12065987 ID=cds.MS.gene041579.t1;Parent=MS.gene041579.t1
chr8.4 exon 12065797 12065876 12065797 ID=MS.gene041579.t1.exon5;Parent=MS.gene041579.t1
chr8.4 CDS 12065797 12065876 12065797 ID=cds.MS.gene041579.t1;Parent=MS.gene041579.t1
chr8.4 exon 12064907 12065705 12064907 ID=MS.gene041579.t1.exon6;Parent=MS.gene041579.t1
chr8.4 CDS 12064907 12065705 12064907 ID=cds.MS.gene041579.t1;Parent=MS.gene041579.t1
chr8.4 exon 12063835 12064511 12063835 ID=MS.gene041579.t1.exon7;Parent=MS.gene041579.t1
chr8.4 CDS 12063835 12064511 12063835 ID=cds.MS.gene041579.t1;Parent=MS.gene041579.t1
chr8.4 exon 12062848 12062932 12062848 ID=MS.gene041579.t1.exon8;Parent=MS.gene041579.t1
chr8.4 CDS 12062848 12062932 12062848 ID=cds.MS.gene041579.t1;Parent=MS.gene041579.t1
chr8.4 exon 12062706 12062757 12062706 ID=MS.gene041579.t1.exon9;Parent=MS.gene041579.t1
chr8.4 CDS 12062706 12062757 12062706 ID=cds.MS.gene041579.t1;Parent=MS.gene041579.t1
chr8.4 exon 12062564 12062613 12062564 ID=MS.gene041579.t1.exon10;Parent=MS.gene041579.t1
chr8.4 CDS 12062564 12062613 12062564 ID=cds.MS.gene041579.t1;Parent=MS.gene041579.t1
chr8.4 exon 12062245 12062292 12062245 ID=MS.gene041579.t1.exon11;Parent=MS.gene041579.t1
chr8.4 CDS 12062245 12062292 12062245 ID=cds.MS.gene041579.t1;Parent=MS.gene041579.t1
Gene Sequence

>MS.gene041579

ATGGAGAACCCTCAATATCCAAACAACCCTCCTCCTTCACCCTATCACCAACGCAGCGCTTCCATTCCCAAGCAGCCATCATCTCACCATTCCGATAACAATGATCCAACCACCGCTGAATTACGTGCTCTCGATTGTAACCTCGCTTCCCTCTGCGAACATGTTCAAATTGAAGGTTTCAATTCCGGCTCTTTTTCCGATATAGTTGTTAATGCAATGGGTTCCACTTATCACCTTCATCGTCTCATCCTCTCCCGCAGTTCATGTTTCAGGTTATCACAATCCACAATCATTCCTTGTTTCATTTTCTCTCTATCCTCGTGTCAAAATTATTGAAATTCTGTTTAATTCATCAATCTTACCACTCTTCCGTTCCCCTGAATAATGTAATCCGTATATTTTACTTCATGATGTGTGTAATTTTGGTGAAGTGTTTAAGTGCATGTTTGGCTCTCCGATGACAAAAGTTGATTTTGTAAAACCGAATTTACTTCAAAGTTAGTTGAATATAAAATGATTTATGTTTAGATAGGTTGTGAGTTGAACAATAAATTTCAATGTAAAAATCACGTTTAGAATTAAAAATAAAAACTACAAATTCTAGGTTTTCAAATTAGAATCAATTCTACTAACTGTACAAGTAACTTTCTAGCTCAAGAGCAATGAAGAGTATATTTGATTACTAGTGCTTTGATATTAGAGCTTTAGTGCTTTTATATTGTATATTTGTATAATTTAGATAGGAAAACGAGGTTATGATCATCTATATGAAGCATGAATTTTCTAGATCATCTTGAAGTGAATTATTAAAAACTTTAAATACAAGTTTGTTATCTGGTGTTTGTGATTCAGGAACATGCTTCATGGTCCCTGGAAAGAAGCCAGTGCTGCTATTGTGACCCTGCAAATCGATGATAACAATGTTAATGACGAGGCTATTGCAATTGCCTTGGCATATCTTTATGGGAACCACCCTAAACTTAATGATAATAATGCATTTCGTGTCCTTGCTGCCGCTTCCTTTCTCGACCTTCAGGTATGTTGTTGTTTACATTGATGGCTTGAAACGAAATATTCAAATCATAACCGTAAAGGCATGATCATTAATACCGTTTAATCTTTTTGCTTGATATTCAGATTTATAATGTTTTTATTTGGTGTATCATTACATCTATGTAGGATTTATGTGCTATATGTACAGATTTCATTATATCTGAGCTATGGACTTCAAACTTCTTGGCTTATCAGGTTCAAAAATCCAGATGCTTGTATAGCCCCATTTGTGAAATTTAACTACTACTGTATACATTTTTGGGTCAGTTATTGGTTGTGTGGGACTGTTTACTAGGTGTTTGCGGAGAACCAAGATTATGGCATTCATGGGGAGCGTGTTAGAACTGCTTGTTGGGGCTACCTCTGTCAAAGTGGCGGCATGGAGTTGAGAGAGGTAACAAGGAAAACCAAGTGCTTGCTTCATTTGGTGGTTTTGGTTCTTGATTATGTGTTTCTTATGAATACAAAGATTATGTTTGATTTGGCAACATTCACTTGTTGCAGGTGCTTCCTAAACTTTCATCTCATACATTACATGCATTACTGACCTCTAATGATCTGTGGATACCCTGTGAAGAGAAGCGGTAAGTGTATCATTGGCCTTTATTTGGGTTTTGTGGTTAGCAGATTGAATTTTGCAAACTGCATAACGCTTTTCTAATGCTTCATGAAAAGGTTTGAATTGGCTTTCCACACATTCCTGGCAAAAAGTGCTCACTGCAAGATTGAACATCCTGCACATGGAATTCCTGGTTCTGAGTCTGGAACTGGCATTCATTCTGATAACACCAAGGGAAAAGGTATAGCTGATGGCTGCACTAACAAGATGTTGGAAACTGACTTGGGGAAAATGAGTCTTAAAAGTGATCTAAAGGACACTAGCATGCCTAACCTTTTAGTTGAGCTTGGAGATTCAGAAGGAGACTTCAACAGTGACATTTCTGATTCCAATCAACGGGTTCAACTTGCTTCATATGCCATTTCACCAAACTTGAATCCATCGTATCCTTGTGATATGGAAGGACCTTCATTGGGTAATTCATTGTCTGATCCAGACGGGGTGAGAACATCATGTTATGTTGAGGTGCCTCTTGGTGCTGGAACAACTACTGGAGTGGGTATTGAAGGGCCTTCTGAGGAAGGATCCTGCTACCATTCAGATAACAACAATAGGTTGGTCAGAGATCAATCAAGAGATTCTTTTTCATCGAGTTCTTGTAGTGGGCTCACTTCCAGTGAATGGGGAAGATATGGAACCCCTTTGCTTTCATGGGGTGGCCATATAGGCAGAAGACAGGTCAAAGCTCATCCCAGAGGAAACTATAGAGATGAAGACGATGTATTTCTTAATATATTTGAAGGGGGCTCACTTTTATATTGCAATATGTCTTTTGATGCACTTTTAAATGTCAGAAAGCAGCTTGAAGAGATAGGATTTCCTTGCAAAGCTGTAAATGATGGTCTATGGCTGCAGGTTGGACTGACATTAATTTGACTTTTGAAGTTTGTTTTCCATTTAGAATCTTAAAGAAAAAACTTATAAATGTAATGTTTCATTCTTTCGTTTTCCCCCTTAAAAGGCTTAAAAACTAATTTTGTCCAATGACATGTTACACTTTTCGTTATTCCCCTAAAACAGACCAAGTTTGTTTAAACCGTTATTCCCCTAACACTTTTCGTTTTCCTCCTCAAGAAGTATCTATTCTTGAAAATATTGGAGTGTCAGAAATTCAAATTCTGCAAATCAATCATGTGGCATATAGGTCACAATACTTGGTATAGAAATTACTATTCATTGGACTAAAATTATTGGTTGTGCATTCTTTTTGACATTACTGCTTTGGTGTTTTATTTTGTTTGCTTTTTCAGATGCTTCTTAGTCAGAGGGTACAAGAGATTGCTGCTGATACATGCAGAGTTTGTTCTCTTATGACTATGTCTTGTACTTGCCATAAGCAGTTTGCATTTTTACATGGATCTACCACCGGATCTTACATACAAGAACATAATCATAACAATATACCTGGGGGTGGTGGAAATATATATGTTGCTGAATCTTCTACAGGTGAAAGAAATGGCTCTTTTAGACCTGTACGGGTACATGTTAGAGGTGCTATTGATGGGCTTGCAGGTATTGGCCGTGGAACTACATTTGTTCCTGCAGCGGCTTCACCTCCTACACGATTTGTCTTTTCTCGTGTGCCATTTGGCGTTGGCAACAGAAACTACCCTCAGTCTGCAGCCAATGATGATTCAGAAGCACGTGCTGATCACAATGGAGACCTGTCTGGAGATGGATTGACAGCTTTAGTCGGGCTTAGCCAGGGAGGGAATTATGGAACAAATGTACATACAGAGCTAACACAAAGGGAACAAGAAATGGGATTGCAAAGTACTGCTGGGGGTGCAAGTACTGGTGGTATTCCCGTACAATTGTTAGAGACACCAGAACATACCATTGGTATAGAATGGGAGAATGACAACAGTTCTTCTATATCATTGGATTTGAAAACACCTTTAAGCCATTTCCCCCCTTTTCGCTTTGGGTAAGTCAGCCACTTTGCAACTATTAATAATTGATAAAGTAATATGGTATATAAATATTGCTAGTTATCTTGTGAGCTGGTTTTTATAACCCAGCTCACTCTTCCACCACACTAGAAGCTTGTAGTGGGTCCATTAGATTTGGTAATCCTTCTTAGTTACAATGTAAGCATTCACAATATTACTATCTTTATTACTCATTGTCGTTGTCTTGTAGATGCTATTTAGCATGACTTCAACCTCGTATGCATAAAAAGTCATGTCCCCAATGTTTGTTGTGAACCATTTTTCTCTACTTGTCGCTCCTCCCTCTTGTTCCCCTTTAACTGTGTTTCTTTTTTATCTGTTTGAATCATCTCCCCTCTTCTGGAAGTTCAATTATCTGCTTGGATGAGAACTTACACACTCTCTTGGAAGATGGCCATGACTCTTGACTATTTTACATAGATATTCCTTTTAAACTATATTTTCTGTGTCTAATATTTTATGACCATTGCTATTTCCTGAATGCATGGAACACCTGCCTTACAATTCAAGTGGGATTCGTCTTGCAATTTCTGTTATCATTTCTTGTATTTCTGTCTCAATTGTTTGACATATACTTTTTTTCTTCTTGCTTTTACTATTTCTGGTTATGTTTCTTTATAGGCAAATACTAACATGTGTCCTAAGGGCAAATGTCAAGGAATAAAAAAATTGACATATTGTCTTGGAAGTGGTGTATTCAGTTCATTAAAAGTTAATAAATTGTTCTTTTCAAGACTATATCCCTCTATTTGGATATGTAACATGTTCCCTTAAGGAACTTGTTAGCAAGACCCATCTTTATAAGGTTCCTAAATTTGTGAGTACTAAGCTTCATTAGTTTATTTAAACGTTCTGAAAATTTCTGTCGATTTTGCAGTGTAAGTTTTGAGGAAGTGCACAGGCTTGGTGATGGCCAGGTCAAGCATTCTCCAGAAGTTTTCTATGCTGGTTCTTTGTGGAAGGTAACATGTACATCAGTTACTCATTATATTCATCTAAGACGATCTTGACTGTCTTGGTTTGAAAATATTTTATTTGTTCTGAATCTTCAGGTCAGTATTCAGGCTTTTAATGATGAAGACCCCCAGGGACGGCGCACCCTTGGTAATGTTTTATTACATCAAAATTATCATCTTCGGGATGTGAACAAATATCAGCAGTAGTAATAATCGTAGATAGTTTGAATGATAATGCAGGATTGTTTCTTCACCGTCGGAAGGCAGAGATAACTGATGTGCACAGGAAGGTTAGCGAGACTGCTTTTCATATATTTCAATTATTTGGGCCTAAGTTGGTTATTGTATTTATGCTTTGAAGTTTGAAAAGTTTATTTTAGTACTAGTAAAATAGTAACGGCCTTACTACCACGCAAGCGACCTTTTTTTTTATCCCTTTTATAGATTTATTACATGGTCTGACATATATACTTGCAAGCTGATTGCAAATAACTTTCATTGTAAATCTTAAATTAAATGTTAGACCTTACATCATGGTATATCTTTGAAATTTGTTATCAGGTACATATGTATGTTGACTCGCGTGAAAAGGTGACTGCACGGTATCAG
Protein sequence

>MS.gene041579.t1

MENPQYPNNPPPSPYHQRSASIPKQPSSHHSDNNDPTTAELRALDCNLASLCEHVQIEGFNSGSFSDIVVNAMGSTYHLHRLILSRSSCFRNMLHGPWKEASAAIVTLQIDDNNVNDEAIAIALAYLYGNHPKLNDNNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAENQDYGIHGERVRTACWGYLCQSGGMELREVLPKLSSHTLHALLTSNDLWIPCEEKRFELAFHTFLAKSAHCKIEHPAHGIPGSESGTGIHSDNTKGKGIADGCTNKMLETDLGKMSLKSDLKDTSMPNLLVELGDSEGDFNSDISDSNQRVQLASYAISPNLNPSYPCDMEGPSLGNSLSDPDGVRTSCYVEVPLGAGTTTGVGIEGPSEEGSCYHSDNNNRLVRDQSRDSFSSSSCSGLTSSEWGRYGTPLLSWGGHIGRRQVKAHPRGNYRDEDDVFLNIFEGGSLLYCNMSFDALLNVRKQLEEIGFPCKAVNDGLWLQMLLSQRVQEIAADTCRVCSLMTMSCTCHKQFAFLHGSTTGSYIQEHNHNNIPGGGGNIYVAESSTGERNGSFRPVRVHVRGAIDGLAGIGRGTTFVPAAASPPTRFVFSRVPFGVGNRNYPQSAANDDSEARADHNGDLSGDGLTALVGLSQGGNYGTNVHTELTQREQEMGLQSTAGGASTGGIPVQLLETPEHTIGIEWENDNSSSISLDLKTPLSHFPPFRFGVSFEEVHRLGDGQVKHSPEVFYAGSLWKVSIQAFNDEDPQGRRTLGLFLHRRKAEITDVHRKVHMYVDSREKVTARYQ