Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041617.t1 | XP_013458277.1 | 72 | 382 | 97 | 4 | 1 | 381 | 1 | 373 | 2.50E-112 | 415.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041617.t1 | A0A072UTB3 | 72.0 | 382 | 97 | 4 | 1 | 381 | 1 | 373 | 1.8e-112 | 415.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene041617.t1 | TR | mTERF |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041617.t1 | MTR_4g120380 | 70.419 | 382 | 103 | 4 | 1 | 381 | 1 | 373 | 0.0 | 534 |
MS.gene041617.t1 | MTR_4g120380 | 69.638 | 359 | 99 | 4 | 1 | 358 | 1 | 350 | 3.17e-174 | 492 |
MS.gene041617.t1 | MTR_4g119580 | 67.368 | 380 | 114 | 4 | 1 | 379 | 1 | 371 | 2.36e-170 | 480 |
MS.gene041617.t1 | MTR_2g437040 | 48.148 | 351 | 173 | 3 | 30 | 378 | 25 | 368 | 3.67e-110 | 328 |
MS.gene041617.t1 | MTR_4g119550 | 48.788 | 330 | 166 | 2 | 50 | 378 | 51 | 378 | 4.59e-107 | 320 |
MS.gene041617.t1 | MTR_2g436400 | 46.629 | 356 | 181 | 3 | 28 | 381 | 30 | 378 | 3.97e-106 | 317 |
MS.gene041617.t1 | MTR_2g436460 | 48.657 | 335 | 169 | 2 | 44 | 377 | 41 | 373 | 3.05e-104 | 312 |
MS.gene041617.t1 | MTR_2g437030 | 48.698 | 384 | 183 | 6 | 1 | 378 | 79 | 454 | 5.36e-104 | 315 |
MS.gene041617.t1 | MTR_2g437990 | 47.564 | 349 | 177 | 3 | 33 | 377 | 33 | 379 | 4.91e-102 | 308 |
MS.gene041617.t1 | MTR_2g438010 | 46.821 | 346 | 177 | 3 | 38 | 378 | 58 | 401 | 7.04e-102 | 308 |
MS.gene041617.t1 | MTR_2g437200 | 44.935 | 385 | 169 | 5 | 32 | 378 | 17 | 396 | 2.24e-101 | 306 |
MS.gene041617.t1 | MTR_2g437130 | 43.915 | 378 | 196 | 3 | 1 | 378 | 8 | 369 | 7.40e-101 | 304 |
MS.gene041617.t1 | MTR_2g437260 | 45.133 | 339 | 184 | 1 | 40 | 378 | 28 | 364 | 1.06e-100 | 304 |
MS.gene041617.t1 | MTR_2g437150 | 47.977 | 346 | 171 | 4 | 40 | 378 | 45 | 388 | 3.47e-100 | 303 |
MS.gene041617.t1 | MTR_2g076320 | 46.286 | 350 | 181 | 3 | 33 | 377 | 33 | 380 | 1.81e-99 | 301 |
MS.gene041617.t1 | MTR_2g437120 | 47.384 | 344 | 165 | 6 | 44 | 378 | 45 | 381 | 3.44e-99 | 301 |
MS.gene041617.t1 | MTR_2g437170 | 47.399 | 346 | 173 | 4 | 40 | 378 | 45 | 388 | 5.43e-99 | 300 |
MS.gene041617.t1 | MTR_2g437960 | 46.687 | 332 | 170 | 3 | 52 | 378 | 55 | 384 | 2.97e-98 | 298 |
MS.gene041617.t1 | MTR_2g437960 | 46.687 | 332 | 170 | 3 | 52 | 378 | 55 | 384 | 5.61e-98 | 298 |
MS.gene041617.t1 | MTR_2g437020 | 45.584 | 351 | 183 | 3 | 30 | 378 | 24 | 368 | 7.26e-98 | 296 |
MS.gene041617.t1 | MTR_2g437080 | 43.684 | 380 | 200 | 4 | 1 | 378 | 1 | 368 | 1.76e-96 | 293 |
MS.gene041617.t1 | MTR_2g437160 | 46.647 | 343 | 177 | 4 | 40 | 378 | 53 | 393 | 5.43e-96 | 292 |
MS.gene041617.t1 | MTR_2g437100 | 46.328 | 354 | 178 | 5 | 35 | 378 | 42 | 393 | 4.58e-95 | 290 |
MS.gene041617.t1 | MTR_4g119570 | 58.431 | 255 | 71 | 2 | 127 | 381 | 13 | 232 | 4.76e-95 | 283 |
MS.gene041617.t1 | MTR_2g437060 | 42.147 | 382 | 205 | 4 | 6 | 378 | 9 | 383 | 2.01e-94 | 288 |
MS.gene041617.t1 | MTR_2g436440 | 43.636 | 385 | 199 | 6 | 1 | 378 | 1 | 374 | 2.27e-94 | 287 |
MS.gene041617.t1 | MTR_2g437180 | 44.959 | 367 | 183 | 6 | 19 | 377 | 22 | 377 | 2.76e-93 | 285 |
MS.gene041617.t1 | MTR_2g019810 | 45.833 | 336 | 166 | 4 | 50 | 378 | 31 | 357 | 1.34e-92 | 282 |
MS.gene041617.t1 | MTR_2g437240 | 40.955 | 398 | 187 | 5 | 27 | 378 | 1 | 396 | 1.80e-92 | 283 |
MS.gene041617.t1 | MTR_2g019840 | 42.744 | 379 | 201 | 5 | 4 | 378 | 3 | 369 | 4.17e-92 | 281 |
MS.gene041617.t1 | MTR_2g438020 | 42.192 | 365 | 171 | 3 | 52 | 378 | 73 | 435 | 3.39e-87 | 273 |
MS.gene041617.t1 | MTR_2g437940 | 43.014 | 365 | 169 | 7 | 19 | 378 | 22 | 352 | 1.16e-83 | 259 |
MS.gene041617.t1 | MTR_3g450500 | 32.102 | 352 | 233 | 2 | 33 | 379 | 21 | 371 | 1.37e-62 | 205 |
MS.gene041617.t1 | MTR_4g007490 | 33.333 | 357 | 228 | 5 | 28 | 378 | 16 | 368 | 8.42e-61 | 201 |
MS.gene041617.t1 | MTR_2g437090 | 53.247 | 154 | 72 | 0 | 225 | 378 | 3 | 156 | 1.07e-50 | 167 |
MS.gene041617.t1 | MTR_2g437160 | 49.708 | 171 | 84 | 1 | 208 | 378 | 134 | 302 | 8.02e-49 | 167 |
MS.gene041617.t1 | MTR_2g437160 | 44.944 | 89 | 47 | 1 | 40 | 126 | 53 | 141 | 7.88e-15 | 75.1 |
MS.gene041617.t1 | MTR_8g080990 | 27.596 | 337 | 242 | 2 | 45 | 379 | 37 | 373 | 1.25e-38 | 142 |
MS.gene041617.t1 | MTR_8g081000 | 27.059 | 340 | 244 | 4 | 45 | 381 | 50 | 388 | 2.62e-36 | 136 |
MS.gene041617.t1 | MTR_8g081000 | 27.059 | 340 | 244 | 4 | 45 | 381 | 50 | 388 | 3.43e-36 | 136 |
MS.gene041617.t1 | MTR_8g081000 | 27.059 | 340 | 244 | 4 | 45 | 381 | 50 | 388 | 3.43e-36 | 136 |
MS.gene041617.t1 | MTR_2g436370 | 39.103 | 156 | 93 | 1 | 44 | 197 | 40 | 195 | 4.65e-33 | 123 |
MS.gene041617.t1 | MTR_4g119615 | 74.510 | 51 | 13 | 0 | 322 | 372 | 26 | 76 | 9.88e-17 | 75.5 |
MS.gene041617.t1 | MTR_4g049400 | 35.338 | 133 | 82 | 2 | 19 | 147 | 17 | 149 | 2.27e-13 | 69.3 |
MS.gene041617.t1 | MTR_2g034600 | 25.000 | 272 | 184 | 6 | 87 | 347 | 215 | 477 | 8.52e-13 | 70.1 |
MS.gene041617.t1 | MTR_2g034600 | 25.000 | 272 | 184 | 6 | 87 | 347 | 276 | 538 | 9.88e-13 | 69.7 |
MS.gene041617.t1 | MTR_2g034600 | 25.000 | 272 | 184 | 6 | 87 | 347 | 280 | 542 | 1.00e-12 | 69.7 |
MS.gene041617.t1 | MTR_2g436380 | 50.820 | 61 | 30 | 0 | 225 | 285 | 3 | 63 | 1.28e-12 | 68.2 |
MS.gene041617.t1 | MTR_3g085240 | 33.533 | 167 | 90 | 5 | 7 | 170 | 22 | 170 | 1.68e-12 | 67.4 |
MS.gene041617.t1 | MTR_3g085240 | 37.079 | 89 | 39 | 1 | 282 | 370 | 176 | 247 | 2.49e-11 | 63.9 |
MS.gene041617.t1 | MTR_2g019830 | 53.968 | 63 | 28 | 1 | 316 | 378 | 136 | 197 | 2.68e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041617.t1 | AT5G07900 | 32.113 | 355 | 233 | 3 | 33 | 379 | 47 | 401 | 7.49e-67 | 217 |
MS.gene041617.t1 | AT1G61990 | 30.952 | 420 | 228 | 10 | 10 | 380 | 5 | 411 | 1.82e-48 | 169 |
MS.gene041617.t1 | AT1G61990 | 30.952 | 420 | 228 | 10 | 10 | 380 | 5 | 411 | 1.82e-48 | 169 |
MS.gene041617.t1 | AT1G21150 | 30.514 | 331 | 224 | 3 | 50 | 375 | 55 | 384 | 1.84e-47 | 166 |
MS.gene041617.t1 | AT1G21150 | 30.514 | 331 | 224 | 3 | 50 | 375 | 119 | 448 | 8.03e-47 | 166 |
MS.gene041617.t1 | AT1G21150 | 29.429 | 333 | 229 | 3 | 48 | 375 | 17 | 348 | 1.80e-45 | 160 |
MS.gene041617.t1 | AT1G61970 | 27.163 | 416 | 254 | 11 | 10 | 379 | 5 | 417 | 7.80e-43 | 154 |
MS.gene041617.t1 | AT1G61970 | 27.163 | 416 | 254 | 11 | 10 | 379 | 5 | 417 | 7.80e-43 | 154 |
MS.gene041617.t1 | AT1G61970 | 27.163 | 416 | 254 | 11 | 10 | 379 | 5 | 417 | 7.80e-43 | 154 |
MS.gene041617.t1 | AT1G61970 | 27.163 | 416 | 254 | 11 | 10 | 379 | 5 | 417 | 7.80e-43 | 154 |
MS.gene041617.t1 | AT1G61970 | 27.163 | 416 | 254 | 11 | 10 | 379 | 5 | 417 | 7.80e-43 | 154 |
MS.gene041617.t1 | AT1G61970 | 27.163 | 416 | 254 | 11 | 10 | 379 | 5 | 417 | 7.80e-43 | 154 |
MS.gene041617.t1 | AT1G61970 | 27.163 | 416 | 254 | 11 | 10 | 379 | 5 | 417 | 7.80e-43 | 154 |
MS.gene041617.t1 | AT1G61980 | 27.371 | 369 | 227 | 7 | 50 | 379 | 51 | 417 | 7.21e-42 | 152 |
MS.gene041617.t1 | AT1G61980 | 27.371 | 369 | 227 | 7 | 50 | 379 | 51 | 417 | 7.21e-42 | 152 |
MS.gene041617.t1 | AT1G61980 | 27.371 | 369 | 227 | 7 | 50 | 379 | 51 | 417 | 7.21e-42 | 152 |
MS.gene041617.t1 | AT1G62120 | 25.954 | 393 | 245 | 7 | 32 | 379 | 32 | 423 | 2.59e-40 | 148 |
MS.gene041617.t1 | AT5G64950 | 29.282 | 362 | 238 | 7 | 31 | 381 | 25 | 379 | 1.66e-34 | 131 |
MS.gene041617.t1 | AT1G62085 | 30.952 | 294 | 191 | 4 | 10 | 292 | 5 | 297 | 7.93e-34 | 131 |
MS.gene041617.t1 | AT1G62085 | 30.952 | 294 | 191 | 4 | 10 | 292 | 5 | 297 | 7.93e-34 | 131 |
MS.gene041617.t1 | AT1G62150 | 24.874 | 398 | 224 | 8 | 46 | 369 | 52 | 448 | 1.91e-32 | 127 |
MS.gene041617.t1 | AT3G46950 | 23.671 | 414 | 248 | 6 | 34 | 380 | 35 | 447 | 2.68e-32 | 126 |
MS.gene041617.t1 | AT1G62110 | 23.598 | 428 | 248 | 9 | 31 | 380 | 32 | 458 | 2.10e-31 | 124 |
MS.gene041617.t1 | AT5G23930 | 23.832 | 428 | 250 | 9 | 25 | 379 | 23 | 447 | 6.79e-30 | 120 |
MS.gene041617.t1 | AT1G62010 | 25.223 | 337 | 205 | 7 | 84 | 379 | 71 | 401 | 2.21e-28 | 115 |
MS.gene041617.t1 | AT1G61960 | 28.409 | 264 | 185 | 3 | 31 | 292 | 32 | 293 | 9.60e-28 | 114 |
MS.gene041617.t1 | AT1G56380 | 22.372 | 371 | 245 | 8 | 42 | 370 | 17 | 386 | 1.36e-21 | 95.9 |
MS.gene041617.t1 | AT1G56380 | 22.740 | 365 | 239 | 8 | 42 | 364 | 6 | 369 | 1.57e-21 | 95.5 |
Find 0 sgRNAs with CRISPR-Local
Find 114 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | AAAAAGGAGATAAAAGAATC+GGG | - | 32541:78530-78549 | None:intergenic | 25.0% |
! | AAATTGAAACTTTGGCAAAA+TGG | - | 32541:78636-78655 | None:intergenic | 25.0% |
! | AAGCAAATAGTAAATACTTG+AGG | - | 32541:78888-78907 | None:intergenic | 25.0% |
! | AGCAAATAGTAAATACTTGA+GGG | - | 32541:78887-78906 | None:intergenic | 25.0% |
! | ATACTAAATCCGAAAATATC+TGG | - | 32541:79223-79242 | None:intergenic | 25.0% |
! | GAAAAAGGAGATAAAAGAAT+CGG | - | 32541:78531-78550 | None:intergenic | 25.0% |
! | GAAGCTAAAAATTGAAACTT+TGG | - | 32541:78644-78663 | None:intergenic | 25.0% |
! | TCAAGCAAAAATTGAACATT+TGG | - | 32541:78851-78870 | None:intergenic | 25.0% |
! | TCAGATATACAGAATATAGA+AGG | - | 32541:78920-78939 | None:intergenic | 25.0% |
! | TTTATCTGAATCTGAAGAAA+TGG | - | 32541:78408-78427 | None:intergenic | 25.0% |
!! | AATAATTCACATACCTTTTC+AGG | - | 32541:79357-79376 | None:intergenic | 25.0% |
!! | GTATATCTGATTCTGATTTT+AGG | + | 32541:78930-78949 | MS.gene041617:CDS | 25.0% |
!! | GTTCAATTTTTGCTTGATTT+TGG | + | 32541:78854-78873 | MS.gene041617:CDS | 25.0% |
!!! | AAGGTATGTGAATTATTTTG+AGG | + | 32541:79360-79379 | MS.gene041617:CDS | 25.0% |
!!! | TTTCAATTTTTAGCTTCCAA+AGG | + | 32541:78647-78666 | MS.gene041617:CDS | 25.0% |
AAATTGGAACTGAAAGAATG+GGG | - | 32541:78371-78390 | None:intergenic | 30.0% | |
AACTCATCAGTCAAAGAAAA+TGG | - | 32541:79331-79350 | None:intergenic | 30.0% | |
ACACAAAAATATCCATTGGA+AGG | - | 32541:78992-79011 | None:intergenic | 30.0% | |
AGAAATTGGAACTGAAAGAA+TGG | - | 32541:78373-78392 | None:intergenic | 30.0% | |
ATAAACCACAATTGTTGATG+AGG | - | 32541:78451-78470 | None:intergenic | 30.0% | |
CACAAAAATATCCATTGGAA+GGG | - | 32541:78991-79010 | None:intergenic | 30.0% | |
GAAATTGGAACTGAAAGAAT+GGG | - | 32541:78372-78391 | None:intergenic | 30.0% | |
GCAAATAGTAAATACTTGAG+GGG | - | 32541:78886-78905 | None:intergenic | 30.0% | |
TCGGATTTAGTATAGAGAAA+AGG | + | 32541:79230-79249 | MS.gene041617:CDS | 30.0% | |
TTCTTACCAAATCAAAAGCA+GGG | - | 32541:78751-78770 | None:intergenic | 30.0% | |
! | TTGAAAGCTCCAGATATTTT+CGG | + | 32541:79211-79230 | MS.gene041617:CDS | 30.0% |
!! | AATAATCCCTGCTTTTGATT+TGG | + | 32541:78742-78761 | MS.gene041617:CDS | 30.0% |
!! | ATATTTTTGTGTGGCATTAC+GGG | + | 32541:79000-79019 | MS.gene041617:CDS | 30.0% |
!! | ATCTGATTCTGATTTTAGGA+AGG | + | 32541:78934-78953 | MS.gene041617:CDS | 30.0% |
!! | GATATTTTTGTGTGGCATTA+CGG | + | 32541:78999-79018 | MS.gene041617:CDS | 30.0% |
!! | TTCCAATGGATATTTTTGTG+TGG | + | 32541:78991-79010 | MS.gene041617:CDS | 30.0% |
!!! | GTATGTGAATTATTTTGAGG+AGG | + | 32541:79363-79382 | MS.gene041617:CDS | 30.0% |
ACACTGTTAAGGCTATATCA+GGG | + | 32541:79394-79413 | MS.gene041617:CDS | 35.0% | |
ACAGTGACAATAATGTCTTG+GGG | - | 32541:78680-78699 | None:intergenic | 35.0% | |
ACTCTTCTTCATCAAACCTT+TGG | - | 32541:79293-79312 | None:intergenic | 35.0% | |
AGAGAAAAGGCTTATTCCAA+GGG | + | 32541:79243-79262 | MS.gene041617:CDS | 35.0% | |
ATAAAAGAATCGGGTTTGTG+AGG | - | 32541:78521-78540 | None:intergenic | 35.0% | |
ATCTGAATCTGAAGAAATGG+TGG | - | 32541:78405-78424 | None:intergenic | 35.0% | |
CAGGGATTATTTGTTTGTCA+AGG | - | 32541:78733-78752 | None:intergenic | 35.0% | |
CTTCTTACCAAATCAAAAGC+AGG | - | 32541:78752-78771 | None:intergenic | 35.0% | |
GACAGTGACAATAATGTCTT+GGG | - | 32541:78681-78700 | None:intergenic | 35.0% | |
GTAATAGCTCTTTGATCAGA+AGG | - | 32541:78782-78801 | None:intergenic | 35.0% | |
TAAAAGAATCGGGTTTGTGA+GGG | - | 32541:78520-78539 | None:intergenic | 35.0% | |
TACACTGTTAAGGCTATATC+AGG | + | 32541:79393-79412 | MS.gene041617:CDS | 35.0% | |
TAGAGAAAAGGCTTATTCCA+AGG | + | 32541:79242-79261 | MS.gene041617:CDS | 35.0% | |
TCATACCTCATCAACAATTG+TGG | + | 32541:78443-78462 | MS.gene041617:CDS | 35.0% | |
TGACAGTGACAATAATGTCT+TGG | - | 32541:78682-78701 | None:intergenic | 35.0% | |
TGCCACACAAAAATATCCAT+TGG | - | 32541:78996-79015 | None:intergenic | 35.0% | |
TTTGGCAAAATGGTTTCGAT+GGG | - | 32541:78626-78645 | None:intergenic | 35.0% | |
! | AACCTTTGGAAAGAAGATAC+TGG | - | 32541:79279-79298 | None:intergenic | 35.0% |
! | AAGAAGGTAACAGCATTTTG+GGG | - | 32541:78339-78358 | None:intergenic | 35.0% |
! | AGAAGAAGGTAACAGCATTT+TGG | - | 32541:78341-78360 | None:intergenic | 35.0% |
! | ATCAACTTTTGCATCCCAAT+GGG | - | 32541:79047-79066 | None:intergenic | 35.0% |
! | ATGGGATTTGAAACGATGAT+GGG | - | 32541:78608-78627 | None:intergenic | 35.0% |
! | GAAGAAGGTAACAGCATTTT+GGG | - | 32541:78340-78359 | None:intergenic | 35.0% |
!! | GAAAACCTAGCTTTATGCTA+CGG | + | 32541:79119-79138 | MS.gene041617:CDS | 35.0% |
!! | TTCTGATTTTAGGAAGGTTG+TGG | + | 32541:78940-78959 | MS.gene041617:CDS | 35.0% |
!!! | AAAACCGTGGGTTTTGAAAA+AGG | - | 32541:78546-78565 | None:intergenic | 35.0% |
!!! | ATCTCCTTTTTCAAAACCCA+CGG | + | 32541:78539-78558 | MS.gene041617:CDS | 35.0% |
AAAAGAATCGGGTTTGTGAG+GGG | - | 32541:78519-78538 | None:intergenic | 40.0% | |
AAGGTTGTGGAGGAGATAAA+GGG | + | 32541:78953-78972 | MS.gene041617:CDS | 40.0% | |
AGATACAAACCATCATTCGC+AGG | + | 32541:78576-78595 | MS.gene041617:CDS | 40.0% | |
CGAGATCTAGCAATTGAAGT+TGG | - | 32541:78821-78840 | None:intergenic | 40.0% | |
CTGATGAGTTGTTCCTGAAA+AGG | + | 32541:79341-79360 | MS.gene041617:CDS | 40.0% | |
CTTTGGCAAAATGGTTTCGA+TGG | - | 32541:78627-78646 | None:intergenic | 40.0% | |
GTCCAGTATCTTCTTTCCAA+AGG | + | 32541:79274-79293 | MS.gene041617:CDS | 40.0% | |
GTTTGTCAAGGCTTGAACAA+AGG | - | 32541:78721-78740 | None:intergenic | 40.0% | |
TGAATCTGAAGAAATGGTGG+TGG | - | 32541:78402-78421 | None:intergenic | 40.0% | |
TGGAGGAGATAAAGGGATTA+GGG | + | 32541:78960-78979 | MS.gene041617:CDS | 40.0% | |
! | AGTTGATGCCTTCAAGAGTT+GGG | + | 32541:79060-79079 | MS.gene041617:CDS | 40.0% |
! | CATCAACTTTTGCATCCCAA+TGG | - | 32541:79048-79067 | None:intergenic | 40.0% |
! | GATGGGATTTGAAACGATGA+TGG | - | 32541:78609-78628 | None:intergenic | 40.0% |
! | GATGGTTTGTATCTGATCGT+TGG | - | 32541:78570-78589 | None:intergenic | 40.0% |
! | TTTTGCATCCCAATGGGATT+TGG | - | 32541:79041-79060 | None:intergenic | 40.0% |
!! | AAGTTGATGCCTTCAAGAGT+TGG | + | 32541:79059-79078 | MS.gene041617:CDS | 40.0% |
!! | AGGAAGCATCTACACTGTTA+AGG | + | 32541:79383-79402 | MS.gene041617:CDS | 40.0% |
!! | TAGCTTTATGCTACGGTCTA+GGG | + | 32541:79126-79145 | MS.gene041617:CDS | 40.0% |
!! | TGATTTTAGGAAGGTTGTGG+AGG | + | 32541:78943-78962 | MS.gene041617:CDS | 40.0% |
!!! | GTAACAGCATTTTGGGGTTT+GGG | - | 32541:78333-78352 | None:intergenic | 40.0% |
!!! | TAACAGCATTTTGGGGTTTG+GGG | - | 32541:78332-78351 | None:intergenic | 40.0% |
AGAACAACCCCAACTCTTGA+AGG | - | 32541:79071-79090 | None:intergenic | 45.0% | |
AGGCTTGAACAAAGGAAACG+AGG | - | 32541:78713-78732 | None:intergenic | 45.0% | |
CTAGACCGTAGCATAAAGCT+AGG | - | 32541:79127-79146 | None:intergenic | 45.0% | |
CTGATCGTTGGAAAAACCGT+GGG | - | 32541:78558-78577 | None:intergenic | 45.0% | |
CTGTTAAGGCTATATCAGGG+AGG | + | 32541:79397-79416 | MS.gene041617:CDS | 45.0% | |
GAAGGTTGTGGAGGAGATAA+AGG | + | 32541:78952-78971 | MS.gene041617:CDS | 45.0% | |
GGCTATCTCCAAATCCCATT+GGG | + | 32541:79030-79049 | MS.gene041617:CDS | 45.0% | |
GGCTTGAACAAAGGAAACGA+GGG | - | 32541:78712-78731 | None:intergenic | 45.0% | |
GTCTAGGGACAAACTCAATG+CGG | + | 32541:79141-79160 | MS.gene041617:CDS | 45.0% | |
GTGGAGGAGATAAAGGGATT+AGG | + | 32541:78959-78978 | MS.gene041617:CDS | 45.0% | |
GTTGATGCCTTCAAGAGTTG+GGG | + | 32541:79061-79080 | MS.gene041617:CDS | 45.0% | |
TCTGATCGTTGGAAAAACCG+TGG | - | 32541:78559-78578 | None:intergenic | 45.0% | |
TGGAACTGAAAGAATGGGGT+CGG | - | 32541:78367-78386 | None:intergenic | 45.0% | |
TGGCTATCTCCAAATCCCAT+TGG | + | 32541:79029-79048 | MS.gene041617:CDS | 45.0% | |
TTAGGGTTTCACCCTTCCAA+TGG | + | 32541:78977-78996 | MS.gene041617:CDS | 45.0% | |
TTGGGTCAAACAGCATGGTT+GGG | + | 32541:79174-79193 | MS.gene041617:CDS | 45.0% | |
TTTGGGTCAAACAGCATGGT+TGG | + | 32541:79173-79192 | MS.gene041617:CDS | 45.0% | |
! | CAATGCGGTGATGCGTTTTT+GGG | + | 32541:79156-79175 | MS.gene041617:CDS | 45.0% |
! | TCAATGCGGTGATGCGTTTT+TGG | + | 32541:79155-79174 | MS.gene041617:CDS | 45.0% |
! | TGTGGCATTACGGGCTAAAA+TGG | + | 32541:79009-79028 | MS.gene041617:CDS | 45.0% |
!! | ATCTGAAGAAATGGTGGTGG+TGG | - | 32541:78399-78418 | None:intergenic | 45.0% |
!! | CTAGCTTTATGCTACGGTCT+AGG | + | 32541:79125-79144 | MS.gene041617:CDS | 45.0% |
!! | GAAGCTTTGAGAGCATCTTG+TGG | - | 32541:78476-78495 | None:intergenic | 45.0% |
!! | GGATTTGAAACGATGATGGG+TGG | - | 32541:78605-78624 | None:intergenic | 45.0% |
!!! | CGTTTTTGGGTCAAACAGCA+TGG | + | 32541:79169-79188 | MS.gene041617:CDS | 45.0% |
!!! | GGTAACAGCATTTTGGGGTT+TGG | - | 32541:78334-78353 | None:intergenic | 45.0% |
AATGGGGTCGGAGAAGAAGA+AGG | - | 32541:78355-78374 | None:intergenic | 50.0% | |
GGGTTTGGGGAAGATCGTTA+AGG | - | 32541:78319-78338 | None:intergenic | 50.0% | |
TACTGGACAACAGAAGCCCT+TGG | - | 32541:79262-79281 | None:intergenic | 50.0% | |
! | GGAGCTTTCAAGAGCACGAA+AGG | - | 32541:79202-79221 | None:intergenic | 50.0% |
!! | TGAAGAAATGGTGGTGGTGG+TGG | - | 32541:78396-78415 | None:intergenic | 50.0% |
GGGTGGAATCCTGCGAATGA+TGG | - | 32541:78588-78607 | None:intergenic | 55.0% | |
!! | GGTGGTGGTGGTGGAGAAAT+TGG | - | 32541:78387-78406 | None:intergenic | 55.0% |
!! | GTCTTGGGGAGAAGCACCTT+TGG | - | 32541:78666-78685 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
32541 | gene | 78281 | 79426 | 78281 | ID=MS.gene041617 |
32541 | mRNA | 78281 | 79426 | 78281 | ID=MS.gene041617.t1;Parent=MS.gene041617 |
32541 | exon | 78281 | 79426 | 78281 | ID=MS.gene041617.t1.exon1;Parent=MS.gene041617.t1 |
32541 | CDS | 78281 | 79426 | 78281 | ID=cds.MS.gene041617.t1;Parent=MS.gene041617.t1 |
Gene Sequence |
Protein sequence |