AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene041666

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041666.t1 MTR_6g074905 87.372 784 14 2 6 740 316 1063 0.0 1343
MS.gene041666.t1 MTR_6g074870 81.818 330 4 2 431 740 1 294 2.25e-177 511
MS.gene041666.t1 MTR_5g082700 80.711 197 38 0 543 739 407 603 2.56e-113 356
MS.gene041666.t1 MTR_5g082700 80.711 197 38 0 543 739 407 603 1.90e-112 355
MS.gene041666.t1 MTR_5g082700 80.711 197 38 0 543 739 407 603 2.38e-112 357
MS.gene041666.t1 MTR_0349s0030 98.462 130 2 0 611 740 54 183 1.10e-85 273
MS.gene041666.t1 MTR_8g069620 92.381 105 8 0 543 647 48 152 1.12e-65 216
MS.gene041666.t1 MTR_6g074750 95.918 98 4 0 646 743 18 115 1.17e-62 205
MS.gene041666.t1 MTR_6g074640 65.789 152 19 2 547 697 24 143 1.48e-55 191
MS.gene041666.t1 MTR_8g070930 41.410 227 126 3 516 739 116 338 2.16e-47 181
MS.gene041666.t1 MTR_1g111180 41.000 200 107 5 546 739 682 876 1.40e-37 151
MS.gene041666.t1 MTR_1g111180 41.000 200 107 5 546 739 683 877 1.40e-37 151
MS.gene041666.t1 MTR_3g076540 35.780 218 112 4 545 739 100 312 3.48e-33 133
MS.gene041666.t1 MTR_3g076540 35.780 218 112 4 545 739 1 213 5.98e-33 130
MS.gene041666.t1 MTR_3g076540 35.780 218 112 4 545 739 18 230 7.74e-33 130
MS.gene041666.t1 MTR_4g104620 35.780 218 112 4 545 739 104 316 1.25e-32 131
MS.gene041666.t1 MTR_4g104620 35.780 218 112 4 545 739 1 213 1.80e-32 129
MS.gene041666.t1 MTR_4g104620 35.780 218 112 4 545 739 10 222 2.22e-32 129
MS.gene041666.t1 MTR_3g109390 35.945 217 112 4 545 739 80 291 3.63e-32 128
MS.gene041666.t1 MTR_3g109390 35.945 217 112 4 545 739 80 291 3.76e-32 129
MS.gene041666.t1 MTR_3g109390 35.945 217 112 4 545 739 80 291 3.88e-32 129
MS.gene041666.t1 MTR_3g109390 35.945 217 112 4 545 739 58 269 4.38e-32 129
MS.gene041666.t1 MTR_3g109390 35.841 226 116 5 538 739 58 278 2.99e-31 127
MS.gene041666.t1 MTR_3g109390 35.841 226 116 5 538 739 80 300 3.89e-31 127
MS.gene041666.t1 MTR_3g086530 34.545 220 114 5 545 739 99 313 1.70e-30 124
MS.gene041666.t1 MTR_3g076540 34.513 226 112 5 545 739 100 320 1.74e-30 125
MS.gene041666.t1 MTR_3g086530 34.545 220 114 5 545 739 99 313 2.27e-30 125
MS.gene041666.t1 MTR_3g086530 34.247 219 114 5 545 738 99 312 5.46e-30 121
MS.gene041666.t1 MTR_3g086530 36.000 200 98 5 565 739 2 196 2.59e-28 116
MS.gene041666.t1 MTR_2g021330 34.101 217 109 8 542 740 28 228 5.33e-22 101
MS.gene041666.t1 MTR_4g117490 33.641 217 110 8 542 740 28 228 6.01e-22 100
MS.gene041666.t1 MTR_2g021330 34.101 217 109 8 542 740 28 228 6.38e-22 99.8
MS.gene041666.t1 MTR_1g084760 31.925 213 134 5 532 740 68 273 1.73e-21 98.2
MS.gene041666.t1 MTR_8g432510 26.899 316 180 10 457 739 39 336 2.16e-21 98.6
MS.gene041666.t1 MTR_7g110060 31.604 212 134 5 532 739 68 272 2.64e-21 97.4
MS.gene041666.t1 MTR_7g110060 31.604 212 134 5 532 739 68 272 4.08e-21 96.3
MS.gene041666.t1 MTR_3g089510 33.333 216 110 8 542 739 28 227 4.84e-21 98.6
MS.gene041666.t1 MTR_4g117490 33.641 217 110 8 542 740 28 228 5.30e-21 97.8
MS.gene041666.t1 MTR_3g089510 33.333 216 110 8 542 739 16 215 5.40e-21 98.2
MS.gene041666.t1 MTR_7g076030 31.507 219 125 8 532 739 134 338 7.50e-21 97.1
MS.gene041666.t1 MTR_5g091680 32.258 217 113 8 542 740 25 225 1.95e-20 95.9
MS.gene041666.t1 MTR_5g091680 32.258 217 113 8 542 740 25 225 2.09e-20 95.5
MS.gene041666.t1 MTR_5g091680 32.258 217 113 8 542 740 25 225 2.12e-20 95.5
MS.gene041666.t1 MTR_5g091680 32.258 217 113 8 542 740 23 223 2.32e-20 95.5
MS.gene041666.t1 MTR_8g106960 32.394 213 116 7 542 739 121 320 2.52e-20 96.3
MS.gene041666.t1 MTR_1g086370 31.776 214 131 6 532 739 68 272 2.53e-20 94.7
MS.gene041666.t1 MTR_3g086530 39.310 145 59 4 620 739 1 141 3.00e-20 91.7
MS.gene041666.t1 MTR_8g106960 32.394 213 116 7 542 739 121 320 3.24e-20 95.9
MS.gene041666.t1 MTR_1g086370 31.776 214 131 6 532 739 35 239 3.81e-20 93.6
MS.gene041666.t1 MTR_7g076030 30.734 218 130 7 532 740 27 232 4.07e-20 93.2
MS.gene041666.t1 MTR_8g028720 32.500 200 120 6 545 738 43 233 1.28e-19 92.0
MS.gene041666.t1 MTR_4g087620 32.323 198 119 6 545 736 61 249 1.35e-19 90.1
MS.gene041666.t1 MTR_8g461040 32.075 212 116 7 543 739 30 228 3.16e-19 92.4
MS.gene041666.t1 MTR_4g087620 32.020 203 113 7 545 736 61 249 3.74e-19 90.9
MS.gene041666.t1 MTR_6g079470 31.944 216 113 8 542 739 92 291 6.46e-19 91.7
MS.gene041666.t1 MTR_2g072840 33.333 216 108 9 543 739 29 227 6.62e-19 91.7
MS.gene041666.t1 MTR_2g016490 30.415 217 130 7 532 739 33 237 7.69e-19 89.7
MS.gene041666.t1 MTR_5g010030 32.500 200 120 6 545 738 47 237 9.42e-19 89.4
MS.gene041666.t1 MTR_7g078690 31.683 202 119 6 545 738 44 234 1.04e-18 89.4
MS.gene041666.t1 MTR_2g083940 30.415 217 130 8 532 739 81 285 1.21e-18 89.7
MS.gene041666.t1 MTR_2g072840 33.180 217 109 9 543 740 29 228 2.25e-18 89.4
MS.gene041666.t1 MTR_2g083940 30.415 217 130 8 532 739 27 231 2.78e-18 87.8
MS.gene041666.t1 MTR_2g005620 29.680 219 129 8 532 739 83 287 6.00e-18 87.4
MS.gene041666.t1 MTR_8g071230 31.658 199 117 6 545 738 10 194 9.71e-18 87.0
MS.gene041666.t1 MTR_5g026960 31.472 197 116 7 545 736 10 192 1.26e-17 86.7
MS.gene041666.t1 MTR_4g061320 33.005 203 115 7 543 736 44 234 1.27e-17 85.9
MS.gene041666.t1 MTR_3g460950 30.198 202 119 7 545 736 38 227 1.33e-16 82.8
MS.gene041666.t1 MTR_3g060330 30.198 202 119 7 545 736 38 227 1.33e-16 82.8
MS.gene041666.t1 MTR_3g112210 29.648 199 124 6 545 736 38 227 1.41e-16 82.8
MS.gene041666.t1 MTR_8g098845 32.500 200 120 6 545 738 58 248 1.61e-16 82.8
MS.gene041666.t1 MTR_1g075610 29.126 206 126 8 545 738 24 221 1.64e-16 81.6
MS.gene041666.t1 MTR_8g012450 31.658 199 117 7 545 738 10 194 2.48e-16 82.4
MS.gene041666.t1 MTR_8g012450 31.658 199 117 7 545 738 10 194 3.19e-16 82.4
MS.gene041666.t1 MTR_3g054080 28.704 216 126 10 540 743 15 214 3.18e-15 79.0
MS.gene041666.t1 MTR_6g048250 33.654 208 108 8 545 740 25 214 8.22e-15 77.0
MS.gene041666.t1 MTR_6g048250 33.654 208 108 8 545 740 25 214 8.33e-15 77.8
MS.gene041666.t1 MTR_6g048250 33.654 208 108 8 545 740 25 214 1.04e-14 77.8
MS.gene041666.t1 MTR_1g048630 31.863 204 117 7 543 739 11 199 1.16e-14 79.0
MS.gene041666.t1 MTR_4g029020 31.884 207 117 9 543 739 16 208 1.27e-14 77.4
MS.gene041666.t1 MTR_8g086000 30.114 176 106 6 570 736 103 270 1.38e-14 77.0
MS.gene041666.t1 MTR_6g012990 32.692 208 110 8 545 740 25 214 1.71e-14 76.3
MS.gene041666.t1 MTR_8g086000 30.114 176 106 6 570 736 60 227 1.97e-14 76.3
MS.gene041666.t1 MTR_4g007750 28.774 212 126 6 545 737 10 215 3.67e-14 74.7
MS.gene041666.t1 MTR_1g090917 27.830 212 131 5 546 744 58 260 3.74e-14 76.3
MS.gene041666.t1 MTR_6g012990 32.692 208 110 8 545 740 25 214 3.90e-14 76.3
MS.gene041666.t1 MTR_3g110405 29.082 196 128 4 545 739 43 228 4.21e-14 74.3
MS.gene041666.t1 MTR_5g017830 33.155 187 108 7 562 741 160 336 5.15e-14 75.9
MS.gene041666.t1 MTR_1g090917 27.830 212 131 5 546 744 58 260 5.48e-14 75.5
MS.gene041666.t1 MTR_4g056390 35.172 145 85 4 540 679 40 180 1.63e-13 74.3
MS.gene041666.t1 MTR_4g103810 42.157 102 53 3 641 738 316 415 1.99e-13 73.9
MS.gene041666.t1 MTR_2g084555 33.793 145 87 3 540 679 41 181 2.23e-13 73.9
MS.gene041666.t1 MTR_4g103810 42.157 102 53 3 641 738 206 305 3.79e-13 72.4
MS.gene041666.t1 MTR_7g072575 31.884 207 117 9 543 739 16 208 6.34e-13 72.0
MS.gene041666.t1 MTR_1g061690 33.103 145 88 3 540 679 45 185 9.01e-13 72.0
MS.gene041666.t1 MTR_1g080020 29.064 203 121 7 545 739 15 202 1.19e-12 69.3
MS.gene041666.t1 MTR_3g040520 27.700 213 129 9 545 739 31 236 1.29e-12 71.2
MS.gene041666.t1 MTR_1g103760 32.057 209 108 10 545 738 18 207 1.39e-12 70.9
MS.gene041666.t1 MTR_4g094430 28.019 207 126 7 542 736 2 197 1.90e-12 69.3
MS.gene041666.t1 MTR_4g107280 32.331 133 78 3 616 739 121 250 2.83e-12 69.7
MS.gene041666.t1 MTR_3g099920 31.401 207 114 9 545 740 25 214 3.20e-12 70.1
MS.gene041666.t1 MTR_4g061130 30.729 192 108 8 545 725 45 222 3.78e-12 68.9
MS.gene041666.t1 MTR_5g024270 32.414 145 89 3 540 679 39 179 3.82e-12 69.7
MS.gene041666.t1 MTR_4g107280 33.071 127 73 3 622 739 166 289 4.35e-12 69.3
MS.gene041666.t1 MTR_5g024270 32.414 145 89 3 540 679 39 179 4.86e-12 68.9
MS.gene041666.t1 MTR_8g086380 29.952 207 121 9 543 739 30 222 5.31e-12 69.3
MS.gene041666.t1 MTR_7g073520 24.696 247 163 6 499 739 112 341 6.91e-12 68.9
MS.gene041666.t1 MTR_3g096230 27.111 225 142 7 523 738 228 439 1.07e-11 68.6
MS.gene041666.t1 MTR_1g090917 29.231 130 69 3 636 744 8 135 1.47e-11 67.4
MS.gene041666.t1 MTR_2g045470 28.241 216 110 7 545 739 26 217 1.70e-11 67.8
MS.gene041666.t1 MTR_1g090917 29.231 130 69 3 636 744 8 135 1.95e-11 67.0
MS.gene041666.t1 MTR_2g016340 28.505 214 115 8 543 739 16 208 2.35e-11 67.0
MS.gene041666.t1 MTR_4g088750 35.294 102 62 2 641 740 300 399 2.48e-11 67.4
MS.gene041666.t1 MTR_3g096230 27.111 225 142 7 523 738 228 439 2.67e-11 67.4
MS.gene041666.t1 MTR_8g093730 28.431 204 124 7 543 737 303 493 4.15e-11 67.0
MS.gene041666.t1 MTR_4g074875 31.068 206 113 7 545 738 26 214 9.41e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041666.t1 AT1G73450 59.823 789 242 11 6 740 275 1042 0.0 870
MS.gene041666.t1 AT1G73460 60.000 790 255 9 6 740 276 1059 0.0 863
MS.gene041666.t1 AT1G73460 60.000 790 255 9 6 740 276 1059 0.0 863
MS.gene041666.t1 AT3G17750 55.051 792 262 10 5 740 275 1028 0.0 763
MS.gene041666.t1 AT2G40120 79.188 197 41 0 543 739 265 461 9.34e-110 345
MS.gene041666.t1 AT5G35980 44.670 197 103 3 545 739 128 320 2.01e-44 172
MS.gene041666.t1 AT5G35980 44.670 197 103 3 545 739 128 320 4.07e-44 171
MS.gene041666.t1 AT5G35980 44.670 197 103 3 545 739 93 285 4.17e-44 171
MS.gene041666.t1 AT1G13350 39.196 199 112 4 546 739 449 643 3.64e-35 143
MS.gene041666.t1 AT1G13350 39.196 199 112 4 546 739 476 670 6.61e-35 142
MS.gene041666.t1 AT1G13350 39.196 199 112 4 546 739 522 716 1.48e-34 141
MS.gene041666.t1 AT3G25840 38.500 200 112 5 546 739 624 818 1.58e-34 142
MS.gene041666.t1 AT4G32660 36.406 217 111 4 545 739 77 288 1.65e-34 135
MS.gene041666.t1 AT4G32660 36.406 217 111 4 545 739 77 288 2.62e-34 136
MS.gene041666.t1 AT3G25840 38.500 200 112 5 546 739 362 556 2.71e-34 140
MS.gene041666.t1 AT4G32660 36.406 217 111 4 545 739 69 280 2.98e-34 135
MS.gene041666.t1 AT4G24740 34.862 218 114 4 545 739 104 316 1.02e-33 133
MS.gene041666.t1 AT4G24740 34.862 218 114 4 545 739 1 213 1.08e-33 130
MS.gene041666.t1 AT4G24740 34.862 218 114 4 545 739 1 213 2.76e-33 131
MS.gene041666.t1 AT4G24740 34.862 218 114 4 545 739 1 213 2.76e-33 131
MS.gene041666.t1 AT4G24740 34.862 218 114 4 545 739 1 213 2.76e-33 131
MS.gene041666.t1 AT4G24740 34.862 218 114 4 545 739 66 278 2.77e-33 132
MS.gene041666.t1 AT4G24740 34.862 218 114 4 545 739 104 316 3.13e-33 133
MS.gene041666.t1 AT3G53640 38.693 199 113 4 546 739 330 524 3.14e-33 136
MS.gene041666.t1 AT4G24740 34.562 217 114 4 545 738 104 315 5.42e-33 130
MS.gene041666.t1 AT3G53570 34.091 220 115 4 545 739 121 335 4.38e-30 125
MS.gene041666.t1 AT3G53570 34.091 220 115 4 545 739 121 335 4.38e-30 125
MS.gene041666.t1 AT3G53570 34.091 220 115 4 545 739 121 335 4.38e-30 125
MS.gene041666.t1 AT3G53570 34.091 220 115 4 545 739 107 321 5.25e-30 124
MS.gene041666.t1 AT3G53570 34.091 220 115 4 545 739 107 321 5.25e-30 124
MS.gene041666.t1 AT4G32660 38.547 179 83 4 583 739 3 176 6.02e-28 114
MS.gene041666.t1 AT5G19010 34.562 217 108 8 542 740 28 228 1.04e-22 103
MS.gene041666.t1 AT3G61160 31.455 213 135 5 532 740 102 307 2.83e-21 96.7
MS.gene041666.t1 AT3G61160 31.455 213 135 5 532 740 95 300 3.36e-21 96.3
MS.gene041666.t1 AT5G26751 30.204 245 142 7 515 739 31 266 4.45e-21 97.1
MS.gene041666.t1 AT3G61160 31.455 213 135 5 532 740 95 300 5.26e-21 96.3
MS.gene041666.t1 AT5G14640 31.797 217 127 7 532 739 67 271 5.32e-21 96.7
MS.gene041666.t1 AT5G14640 31.797 217 127 7 532 739 67 271 5.32e-21 96.7
MS.gene041666.t1 AT3G18040 32.870 216 111 8 542 739 26 225 6.24e-21 97.4
MS.gene041666.t1 AT3G18040 32.870 216 111 8 542 739 135 334 6.46e-21 98.2
MS.gene041666.t1 AT3G61160 31.455 213 135 5 532 740 102 307 6.83e-21 96.7
MS.gene041666.t1 AT3G18040 32.870 216 111 8 542 739 21 220 6.86e-21 97.4
MS.gene041666.t1 AT3G61160 31.455 213 135 5 532 740 95 300 8.58e-21 96.3
MS.gene041666.t1 AT3G61160 31.455 213 135 5 532 740 95 300 1.01e-20 95.9
MS.gene041666.t1 AT3G18040 32.870 216 111 8 542 739 135 334 1.72e-20 97.1
MS.gene041666.t1 AT3G05840 30.660 212 136 5 532 739 66 270 2.90e-20 94.4
MS.gene041666.t1 AT3G05840 30.660 212 136 5 532 739 66 270 2.90e-20 94.4
MS.gene041666.t1 AT1G18150 32.870 216 111 8 542 739 107 306 3.42e-20 95.9
MS.gene041666.t1 AT1G18150 32.870 216 111 8 542 739 107 306 3.42e-20 95.9
MS.gene041666.t1 AT1G18150 32.870 216 111 8 542 739 107 306 3.42e-20 95.9
MS.gene041666.t1 AT1G09840 30.415 217 130 7 532 739 76 280 1.15e-19 92.8
MS.gene041666.t1 AT1G09840 30.415 217 130 7 532 739 76 280 1.15e-19 92.8
MS.gene041666.t1 AT1G09840 30.415 217 130 7 532 739 76 280 1.15e-19 92.8
MS.gene041666.t1 AT1G09840 30.415 217 130 7 532 739 76 280 1.15e-19 92.8
MS.gene041666.t1 AT1G09840 30.415 217 130 7 532 739 76 280 1.15e-19 92.8
MS.gene041666.t1 AT1G09840 30.415 217 130 7 532 739 76 280 1.15e-19 92.8
MS.gene041666.t1 AT1G09840 30.415 217 130 7 532 739 76 280 1.15e-19 92.8
MS.gene041666.t1 AT1G09840 30.415 217 130 7 532 739 76 280 1.15e-19 92.8
MS.gene041666.t1 AT1G09840 30.415 217 130 7 532 739 76 280 1.15e-19 92.8
MS.gene041666.t1 AT1G09840 30.415 217 130 7 532 739 76 280 1.15e-19 92.8
MS.gene041666.t1 AT1G73670 32.870 216 111 8 542 739 93 292 1.85e-19 93.2
MS.gene041666.t1 AT2G42880 32.407 216 112 8 542 739 28 227 1.86e-19 93.6
MS.gene041666.t1 AT1G57870 31.390 223 120 9 532 739 75 279 1.91e-19 92.0
MS.gene041666.t1 AT1G57870 31.390 223 120 9 532 739 75 279 1.91e-19 92.0
MS.gene041666.t1 AT1G57870 31.390 223 120 9 532 739 75 279 1.91e-19 92.0
MS.gene041666.t1 AT2G42880 32.407 216 112 8 542 739 28 227 3.09e-19 92.0
MS.gene041666.t1 AT1G06390 31.336 217 128 9 532 739 63 267 3.50e-19 91.3
MS.gene041666.t1 AT1G06390 31.336 217 128 9 532 739 63 267 3.50e-19 91.3
MS.gene041666.t1 AT4G00720 30.374 214 128 7 535 739 134 335 3.53e-19 91.7
MS.gene041666.t1 AT1G53510 31.628 215 113 8 543 739 29 227 4.29e-19 92.4
MS.gene041666.t1 AT4G18710 30.275 218 131 7 532 740 33 238 4.33e-19 90.5
MS.gene041666.t1 AT4G18710 30.275 218 131 7 532 740 27 232 4.50e-19 88.6
MS.gene041666.t1 AT1G57870 31.390 223 120 9 532 739 75 279 5.22e-19 90.9
MS.gene041666.t1 AT2G30980 30.876 217 129 8 532 739 65 269 7.36e-19 90.1
MS.gene041666.t1 AT4G19110 31.658 199 117 7 545 738 10 194 9.27e-19 90.5
MS.gene041666.t1 AT4G11330 32.039 206 113 7 545 738 49 239 9.53e-19 89.4
MS.gene041666.t1 AT4G01370 33.500 200 118 6 545 738 49 239 1.01e-18 89.4
MS.gene041666.t1 AT4G19110 31.658 199 117 7 545 738 10 194 1.02e-18 90.1
MS.gene041666.t1 AT2G46070 32.836 201 120 5 545 739 47 238 1.55e-18 87.8
MS.gene041666.t1 AT2G46070 32.161 199 124 4 545 739 47 238 1.67e-18 88.6
MS.gene041666.t1 AT2G46070 32.161 199 124 4 545 739 81 272 1.76e-18 89.0
MS.gene041666.t1 AT4G24740 43.689 103 35 2 660 739 8 110 2.56e-18 85.1
MS.gene041666.t1 AT4G24740 43.689 103 35 2 660 739 8 110 2.56e-18 85.1
MS.gene041666.t1 AT3G14720 32.093 215 112 8 543 739 29 227 3.06e-18 89.7
MS.gene041666.t1 AT2G43790 32.500 200 116 7 545 736 69 257 6.80e-18 87.0
MS.gene041666.t1 AT2G01450 31.308 214 119 7 542 740 19 219 8.03e-18 87.8
MS.gene041666.t1 AT2G01450 31.308 214 119 7 542 740 19 219 8.03e-18 87.8
MS.gene041666.t1 AT2G01450 31.308 214 119 7 542 740 19 219 8.03e-18 87.8
MS.gene041666.t1 AT2G01450 31.308 214 119 7 542 740 19 219 8.03e-18 87.8
MS.gene041666.t1 AT1G01560 34.653 202 113 7 545 738 46 236 1.43e-17 84.0
MS.gene041666.t1 AT1G01560 34.653 202 113 7 545 738 46 236 1.43e-17 84.0
MS.gene041666.t1 AT5G45430 31.841 201 114 8 545 738 10 194 1.78e-17 86.7
MS.gene041666.t1 AT1G01560 34.653 202 113 7 545 738 46 236 1.85e-17 85.1
MS.gene041666.t1 AT5G45430 31.841 201 114 8 545 738 10 194 1.91e-17 86.7
MS.gene041666.t1 AT3G14720 31.944 216 113 8 543 740 29 228 2.37e-17 85.9
MS.gene041666.t1 AT3G14720 31.944 216 113 8 543 740 29 228 2.37e-17 85.9
MS.gene041666.t1 AT1G01560 34.000 200 117 6 545 738 46 236 2.51e-17 85.1
MS.gene041666.t1 AT1G73690 30.189 212 128 8 540 744 12 210 3.47e-17 85.1
MS.gene041666.t1 AT3G59790 32.683 205 109 8 545 736 66 254 4.52e-17 84.3
MS.gene041666.t1 AT1G07880 32.828 198 118 7 545 736 39 227 5.57e-17 82.0
MS.gene041666.t1 AT1G07880 32.828 198 118 7 545 736 39 227 6.80e-17 83.6
MS.gene041666.t1 AT3G45640 32.020 203 113 8 545 736 44 232 7.10e-17 83.6
MS.gene041666.t1 AT3G18040 36.957 138 63 5 614 739 12 137 1.75e-16 83.2
MS.gene041666.t1 AT1G76540 29.126 206 126 8 545 738 20 217 3.91e-16 80.5
MS.gene041666.t1 AT4G36450 30.612 196 123 5 545 736 38 224 6.88e-16 80.5
MS.gene041666.t1 AT1G09840 46.809 94 45 4 650 739 61 153 7.31e-16 79.3
MS.gene041666.t1 AT1G20930 29.808 208 122 9 545 738 22 219 7.59e-16 79.7
MS.gene041666.t1 AT1G18040 28.302 212 132 9 540 744 13 211 1.56e-15 79.7
MS.gene041666.t1 AT2G17530 36.552 145 83 3 540 679 39 179 3.00e-15 78.6
MS.gene041666.t1 AT4G13020 31.980 197 115 7 545 736 10 192 5.02e-15 78.6
MS.gene041666.t1 AT2G17530 36.552 145 83 3 540 679 39 179 6.85e-15 78.2
MS.gene041666.t1 AT2G17530 36.552 145 83 3 540 679 39 179 6.85e-15 78.2
MS.gene041666.t1 AT4G13020 31.980 197 115 7 545 736 10 192 8.48e-15 77.8
MS.gene041666.t1 AT4G13020 31.980 197 115 7 545 736 10 192 9.71e-15 77.4
MS.gene041666.t1 AT4G13020 31.980 197 115 7 545 736 10 192 1.06e-14 77.0
MS.gene041666.t1 AT1G10210 29.146 199 125 6 545 736 38 227 1.06e-14 77.0
MS.gene041666.t1 AT1G10210 29.146 199 125 6 545 736 38 227 1.06e-14 77.0
MS.gene041666.t1 AT1G10210 29.146 199 125 6 545 736 38 227 1.06e-14 77.0
MS.gene041666.t1 AT1G59580 29.146 199 125 6 545 736 38 227 1.07e-14 77.0
MS.gene041666.t1 AT1G59580 29.146 199 125 6 545 736 38 227 1.07e-14 77.0
MS.gene041666.t1 AT4G13020 33.166 199 110 9 545 736 18 200 1.14e-14 77.4
MS.gene041666.t1 AT4G13020 33.166 199 110 9 545 736 18 200 1.15e-14 77.4
MS.gene041666.t1 AT2G18170 29.146 199 125 6 545 736 38 227 2.71e-14 75.9
MS.gene041666.t1 AT2G25880 27.876 226 139 6 528 739 1 216 4.77e-14 73.9
MS.gene041666.t1 AT5G39440 31.401 207 113 7 545 740 25 213 1.36e-13 74.3
MS.gene041666.t1 AT1G53570 29.952 207 119 8 543 738 218 409 1.42e-13 74.3
MS.gene041666.t1 AT1G53570 29.952 207 119 8 543 738 218 409 1.44e-13 74.3
MS.gene041666.t1 AT1G50240 30.882 204 119 7 543 739 10 198 1.77e-13 75.1
MS.gene041666.t1 AT1G50240 30.882 204 119 7 543 739 10 198 1.77e-13 75.1
MS.gene041666.t1 AT1G53570 29.952 207 119 8 543 738 218 409 2.02e-13 74.3
MS.gene041666.t1 AT3G44850 32.653 147 90 3 538 679 44 186 2.06e-13 73.9
MS.gene041666.t1 AT2G34290 40.952 105 55 2 644 741 105 209 2.06e-13 71.6
MS.gene041666.t1 AT1G08650 31.677 161 98 5 582 740 62 212 2.12e-13 71.6
MS.gene041666.t1 AT1G53570 29.952 207 119 8 543 738 218 409 2.28e-13 73.9
MS.gene041666.t1 AT1G53570 29.952 207 119 8 543 738 218 409 2.28e-13 73.9
MS.gene041666.t1 AT3G29160 31.731 208 112 8 545 740 26 215 2.28e-13 72.8
MS.gene041666.t1 AT5G04510 26.126 222 122 6 546 744 51 253 2.35e-13 73.2
MS.gene041666.t1 AT1G53570 29.952 207 119 8 543 738 218 409 2.42e-13 73.9
MS.gene041666.t1 AT1G08650 31.677 161 98 5 582 740 62 212 2.61e-13 71.6
MS.gene041666.t1 AT2G25880 27.193 228 142 6 526 739 60 277 3.02e-13 72.4
MS.gene041666.t1 AT3G29160 31.731 208 112 8 545 740 26 215 3.40e-13 73.2
MS.gene041666.t1 AT3G29160 31.731 208 112 8 545 740 26 215 3.40e-13 73.2
MS.gene041666.t1 AT2G38490 33.810 210 109 12 543 739 32 224 4.58e-13 72.4
MS.gene041666.t1 AT4G13020 30.500 200 123 7 545 736 10 201 4.59e-13 72.4
MS.gene041666.t1 AT2G38620 28.302 212 127 6 545 737 10 215 4.98e-13 71.2
MS.gene041666.t1 AT5G04510 27.315 216 127 7 546 744 51 253 5.51e-13 72.4
MS.gene041666.t1 AT4G26890 34.513 113 68 3 628 740 87 193 6.83e-13 72.0
MS.gene041666.t1 AT4G13020 30.500 200 123 7 545 736 10 201 9.36e-13 71.2
MS.gene041666.t1 AT3G01090 31.250 208 113 8 545 740 25 214 1.15e-12 71.6
MS.gene041666.t1 AT3G01090 31.250 208 113 8 545 740 25 214 1.15e-12 71.6
MS.gene041666.t1 AT4G35500 33.103 145 88 3 540 679 39 179 1.20e-12 71.2
MS.gene041666.t1 AT3G01090 31.250 208 113 8 545 740 48 237 1.32e-12 71.6
MS.gene041666.t1 AT5G22840 33.103 145 88 3 540 679 46 186 1.47e-12 71.2
MS.gene041666.t1 AT4G30960 31.604 212 111 10 543 739 28 220 1.83e-12 70.5
MS.gene041666.t1 AT2G25880 28.061 196 130 4 545 739 44 229 2.11e-12 69.3
MS.gene041666.t1 AT3G04530 32.867 143 87 5 600 739 71 207 2.29e-12 68.6
MS.gene041666.t1 AT5G55090 31.579 114 72 3 628 740 88 196 2.81e-12 70.1
MS.gene041666.t1 AT3G53030 30.345 145 92 3 540 679 43 183 3.56e-12 70.1
MS.gene041666.t1 AT2G38620 33.846 130 81 3 611 736 86 214 3.73e-12 67.8
MS.gene041666.t1 AT2G38620 33.846 130 81 3 611 736 86 214 3.73e-12 67.8
MS.gene041666.t1 AT4G32830 27.551 196 131 4 545 739 37 222 4.07e-12 68.2
MS.gene041666.t1 AT4G29810 41.837 98 51 3 646 739 168 263 4.26e-12 68.9
MS.gene041666.t1 AT1G53165 28.761 226 130 8 526 739 2 208 4.54e-12 70.1
MS.gene041666.t1 AT2G42550 37.736 106 49 4 646 739 115 215 4.70e-12 68.6
MS.gene041666.t1 AT1G53165 28.761 226 130 8 526 739 2 208 4.87e-12 70.1
MS.gene041666.t1 AT5G04510 26.126 222 122 6 546 744 51 253 4.92e-12 68.2
MS.gene041666.t1 AT1G53050 27.619 210 127 8 545 743 140 335 5.02e-12 70.1
MS.gene041666.t1 AT1G53050 27.619 210 127 8 545 743 140 335 5.02e-12 70.1
MS.gene041666.t1 AT5G10270 28.095 210 126 9 545 736 32 234 5.12e-12 69.3
MS.gene041666.t1 AT1G53165 28.761 226 130 8 526 739 2 208 5.96e-12 69.7
MS.gene041666.t1 AT4G29810 41.837 98 51 3 646 739 177 272 6.18e-12 68.6
MS.gene041666.t1 AT4G29810 41.837 98 51 3 646 739 177 272 1.21e-11 67.4
MS.gene041666.t1 AT5G55090 31.579 114 72 3 628 740 150 258 1.64e-11 67.8
MS.gene041666.t1 AT4G14580 29.384 211 115 9 545 739 27 219 1.64e-11 67.4
MS.gene041666.t1 AT5G57630 28.708 209 114 7 545 739 18 205 2.32e-11 67.0
MS.gene041666.t1 AT2G34180 29.907 214 112 10 543 739 61 253 2.73e-11 67.0
MS.gene041666.t1 AT3G10540 25.926 216 130 7 546 744 52 254 2.75e-11 67.0
MS.gene041666.t1 AT1G68400 27.650 217 132 8 533 739 356 557 2.89e-11 67.4
MS.gene041666.t1 AT2G05060 35.246 122 62 3 635 741 101 220 3.11e-11 65.9
MS.gene041666.t1 AT5G57630 28.708 209 114 7 545 739 18 205 3.40e-11 66.6
MS.gene041666.t1 AT3G08720 26.638 229 148 5 516 739 120 333 4.34e-11 66.2
MS.gene041666.t1 AT3G08720 26.638 229 148 5 516 739 120 333 4.34e-11 66.2
MS.gene041666.t1 AT3G08720 26.638 229 148 5 516 739 120 333 4.34e-11 66.2
MS.gene041666.t1 AT3G08720 26.638 229 148 5 516 739 120 333 4.34e-11 66.2
MS.gene041666.t1 AT2G41930 35.714 112 54 5 646 741 111 220 4.90e-11 65.5
MS.gene041666.t1 AT3G17510 31.731 208 117 10 543 739 24 217 5.17e-11 66.2
MS.gene041666.t1 AT2G37840 28.780 205 121 8 545 739 18 207 6.40e-11 66.2
MS.gene041666.t1 AT3G08730 25.481 208 126 4 543 739 138 327 6.50e-11 65.9
MS.gene041666.t1 AT3G08730 25.481 208 126 4 543 739 138 327 6.50e-11 65.9

Find 178 sgRNAs with CRISPR-Local

Find 418 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAACTACTGTTGATAATTA+TGG 0.117749 6.3:-69539852 MS.gene041666:CDS
GCTGACAGCTCTTTACTTAT+TGG 0.146422 6.3:-69542247 MS.gene041666:CDS
ATTTAACCATGGCAACTTAC+TGG 0.230968 6.3:+69540031 None:intergenic
CTTGAAGCCGGAGAATATTT+TGG 0.237591 6.3:-69537112 MS.gene041666:CDS
TTTACTTATTGGATCTTATC+TGG 0.246350 6.3:-69542236 MS.gene041666:CDS
CATAAATTTAACAGAGAATC+AGG 0.249259 6.3:-69537950 MS.gene041666:CDS
ATAAGCCGTTGACTATTAAT+TGG 0.257446 6.3:-69542315 MS.gene041666:CDS
TCGATTATCCAAATGAATAT+TGG 0.261549 6.3:-69540886 MS.gene041666:CDS
TAAAGATAGCCAGATGATTC+AGG 0.272060 6.3:-69540063 MS.gene041666:CDS
GGCTAATGGTAATGATTTAA+TGG 0.279453 6.3:-69540564 MS.gene041666:CDS
GTCAATTACCATTCAATGTT+TGG 0.292705 6.3:-69537178 MS.gene041666:CDS
ATTACAAGGGAAGATGATTT+AGG 0.302027 6.3:-69539777 MS.gene041666:CDS
GTGTTAGAGGTACATGAAAA+TGG 0.307134 6.3:-69536818 MS.gene041666:intron
CTTCACCCGAGAAAAGTTCT+AGG 0.316441 6.3:-69539917 MS.gene041666:CDS
GATACCTCTGATCTTGTATC+AGG 0.317158 6.3:-69540944 MS.gene041666:CDS
AAAGAGCAGGTGGGTGAAGT+TGG 0.319733 6.3:-69542472 MS.gene041666:CDS
TGATTTCGGAAAGAATTCTA+TGG 0.340361 6.3:-69540216 MS.gene041666:CDS
CTTCTGATGTATGGAAAGAT+TGG 0.347745 6.3:-69542530 None:intergenic
CACGGTTCAGTTAGGTCAAT+CGG 0.353249 6.3:-69540374 MS.gene041666:CDS
CGTGATCGTGATAGTGGACT+TGG 0.356374 6.3:-69540260 MS.gene041666:CDS
CTTCACAATGCCAAGATTGC+AGG 0.358829 6.3:-69537915 MS.gene041666:intron
GCCCTCGCATCACCGATATC+TGG 0.359185 6.3:+69542502 None:intergenic
ATATATTATACTTACATTGC+CGG 0.360172 6.3:+69536906 None:intergenic
CGATTATCCAAATGAATATT+GGG 0.360858 6.3:-69540885 MS.gene041666:CDS
AAACACTCTCATCATGATTT+CGG 0.365291 6.3:-69540230 MS.gene041666:CDS
GAAGAGGATTCTTATTTCTC+TGG 0.365779 6.3:-69540674 MS.gene041666:CDS
CGTGCTCCTGAGGTTATTCT+CGG 0.367843 6.3:-69536991 MS.gene041666:CDS
TTCCATCTCCCAACATGATT+AGG 0.369947 6.3:+69540450 None:intergenic
TCAGAGTCCCAATATTCATT+TGG 0.374608 6.3:+69540878 None:intergenic
TTCTGCTTCTCCAATGCAAC+AGG 0.378203 6.3:+69542382 None:intergenic
ATGCACTTCACTGCCGATAT+CGG 0.378621 6.3:+69540328 None:intergenic
CAACTACTGTTGATAATTAT+GGG 0.381112 6.3:-69539851 MS.gene041666:CDS
TCTTATCTGGATGTACCTAT+TGG 0.383337 6.3:-69542223 MS.gene041666:CDS
AACAGTGATGCTGCCGATAT+CGG 0.384344 6.3:-69540341 MS.gene041666:CDS
CGATGGATTGGCTGCTAAGC+TGG 0.396555 6.3:-69542275 MS.gene041666:CDS
GCACGCGGAACCTGTCTGGC+AGG 0.402911 6.3:-69540495 MS.gene041666:CDS
ACTCTACAAACCTGCAATCT+TGG 0.406214 6.3:+69537905 None:intergenic
GGACCTCTTTCCTGAGGATC+TGG 0.410492 6.3:+69540731 None:intergenic
TTCTGATGTATGGAAAGATT+GGG 0.413846 6.3:-69542529 None:intergenic
TGATGCACGCGGAACCTGTC+TGG 0.426564 6.3:-69540499 MS.gene041666:CDS
GTGCAGGTCATGAGCTTGTA+TGG 0.428039 6.3:+69538687 None:intergenic
ATGCAGACGACGACGATGTT+GGG 0.430507 6.3:-69540850 MS.gene041666:CDS
AAGATCACGACTCGAGGAAA+TGG 0.430640 6.3:-69540408 MS.gene041666:CDS
AATATGTATGGACGGGCTAA+TGG 0.431000 6.3:-69540578 MS.gene041666:CDS
AAGAGCAGGTGGGTGAAGTT+GGG 0.436064 6.3:-69542471 MS.gene041666:CDS
TTTATGAAACTCGTATAAGT+TGG 0.437394 6.3:+69537967 None:intergenic
CTTCAGTATTTACATAACCT+TGG 0.444556 6.3:-69537150 MS.gene041666:CDS
CTCAGGAGCACGATAGGATC+TGG 0.459128 6.3:+69537002 None:intergenic
CGATCAATCTTTCGCTGAAG+AGG 0.462595 6.3:-69540690 MS.gene041666:CDS
ACGGTTCAGTTAGGTCAATC+GGG 0.463137 6.3:-69540373 MS.gene041666:CDS
ATGATCAACACGGTTCAGTT+AGG 0.463977 6.3:-69540382 MS.gene041666:CDS
TACCCTAGTGACAATGAAAA+GGG 0.464653 6.3:-69540773 MS.gene041666:CDS
ATCTGGAACACTTCCATGCC+CGG 0.465822 6.3:+69540748 None:intergenic
ATGACAAGAAGATTGATATC+TGG 0.466209 6.3:-69536960 MS.gene041666:CDS
TATTTCCGTGATCGTGATAG+TGG 0.470031 6.3:-69540266 MS.gene041666:CDS
TTAGGTATGAGGAAGGCTAC+AGG 0.471617 6.3:-69541004 MS.gene041666:intron
CTGGTCCCTTGGATGCATCT+TGG 0.473461 6.3:-69536941 MS.gene041666:CDS
ATAACGGTTACTAATATGTA+TGG 0.473594 6.3:-69540590 MS.gene041666:CDS
GGGACAAAGCCCTGCCAGAC+AGG 0.474276 6.3:+69540485 None:intergenic
AAGATTGATATCTGGTCCCT+TGG 0.481494 6.3:-69536952 MS.gene041666:CDS
AAGAATGTTGAGCCGGTCAT+CGG 0.482440 6.3:-69540632 MS.gene041666:CDS
AGAATGTTGAGCCGGTCATC+GGG 0.483723 6.3:-69540631 MS.gene041666:CDS
AATGAAAAGGGGACCGGGCA+TGG 0.484331 6.3:-69540761 MS.gene041666:CDS
AGCGAGAAGTTTGAATCCGA+TGG 0.484971 6.3:-69542292 MS.gene041666:CDS
GAAGTTTGAATCCGATGGAT+TGG 0.487840 6.3:-69542287 MS.gene041666:CDS
TTGATCGTCATCCTCCTCTC+TGG 0.488847 6.3:+69540706 None:intergenic
AACCAGGCCTCATCCTCAAT+AGG 0.494298 6.3:+69540815 None:intergenic
AACCACCACCCTGAATCATC+TGG 0.494607 6.3:+69540054 None:intergenic
TTTATTGGTGGTAGCAGTGA+AGG 0.495063 6.3:-69540299 MS.gene041666:CDS
TTACCCTAGTGACAATGAAA+AGG 0.495621 6.3:-69540774 MS.gene041666:CDS
AAGTGCTTCCAAACATTGAA+TGG 0.497818 6.3:+69537170 None:intergenic
TCAGTTAGGTCAATCGGGGT+GGG 0.498477 6.3:-69540368 MS.gene041666:CDS
ATGAAGAAGTTGACATTACA+AGG 0.499940 6.3:-69539791 MS.gene041666:CDS
AGATTGGGGAAGCCAGATAT+CGG 0.500192 6.3:-69542514 MS.gene041666:CDS
GACCTAATCATGTTGGGAGA+TGG 0.500671 6.3:-69540452 MS.gene041666:CDS
TATGTCAATAAGCATGATCC+TGG 0.504155 6.3:-69538580 MS.gene041666:CDS
GACAAATGACCTAATCATGT+TGG 0.504653 6.3:-69540459 MS.gene041666:CDS
TCGTCATCCTCCTCTCTGGC+AGG 0.505306 6.3:+69540710 None:intergenic
CCATAATTATCAACAGTAGT+TGG 0.505346 6.3:+69539852 None:intergenic
TGGAAGTGTTCCAGATCCTC+AGG 0.506410 6.3:-69540741 MS.gene041666:CDS
TATGCAGACGACGACGATGT+TGG 0.507087 6.3:-69540851 MS.gene041666:CDS
ACAAATGACCTAATCATGTT+GGG 0.508644 6.3:-69540458 MS.gene041666:CDS
TTCAGTTAGGTCAATCGGGG+TGG 0.510316 6.3:-69540369 MS.gene041666:CDS
CTGATGAAATGCTTTCTTCG+TGG 0.513180 6.3:-69539959 MS.gene041666:CDS
GATTGCTGCTGTGCAAGAGC+AGG 0.514712 6.3:-69539733 MS.gene041666:intron
AGAGCATGTCAAGCTAGAAA+AGG 0.514729 6.3:-69539817 MS.gene041666:CDS
TGAGAAGTTTGATTTCATCA+AGG 0.517055 6.3:+69538605 None:intergenic
AAAGATAGCCAGATGATTCA+GGG 0.519030 6.3:-69540062 MS.gene041666:CDS
TTATTGGTGGTAGCAGTGAA+GGG 0.520773 6.3:-69540298 MS.gene041666:CDS
GAGGTGAAGGTCATTGATCT+TGG 0.522315 6.3:-69537069 MS.gene041666:CDS
TCAATACGATGGAGAATTGA+TGG 0.526615 6.3:-69540540 MS.gene041666:CDS
GTGATCGTGATAGTGGACTT+GGG 0.535123 6.3:-69540259 MS.gene041666:CDS
GTGGTTCCAGTAAGTTGCCA+TGG 0.538088 6.3:-69540037 MS.gene041666:CDS
CGGTTACTAATATGTATGGA+CGG 0.538280 6.3:-69540586 MS.gene041666:CDS
CACGCGGAACCTGTCTGGCA+GGG 0.540612 6.3:-69540494 MS.gene041666:CDS
AGATGATCCCATCGGTATAA+CGG 0.545256 6.3:-69540606 MS.gene041666:CDS
TGATCGTGATAGTGGACTTG+GGG 0.546159 6.3:-69540258 MS.gene041666:CDS
CTCTGATATTCCTTGACTAA+CGG 0.547366 6.3:+69540967 None:intergenic
GGATCATCTGACCCGATGAC+CGG 0.549723 6.3:+69540620 None:intergenic
AGCAGAAGGAAGAGTATCCA+AGG 0.551230 6.3:-69542366 MS.gene041666:CDS
TCGAATAAATATGTCATTGG+AGG 0.552330 6.3:-69540152 MS.gene041666:CDS
GGAAAAGTTCTGAATCATAG+TGG 0.553356 6.3:-69540431 MS.gene041666:CDS
AATAACCTCAGGAGCACGAT+AGG 0.553383 6.3:+69536996 None:intergenic
TTCACCCGAGAAAAGTTCTA+GGG 0.553463 6.3:-69539916 MS.gene041666:CDS
AGTGACAATGAAAAGGGGAC+CGG 0.556126 6.3:-69540767 MS.gene041666:CDS
GAGTCGAATAAATATGTCAT+TGG 0.556213 6.3:-69540155 MS.gene041666:CDS
TGATTAGGTCATTTGTCTGA+GGG 0.557217 6.3:+69540465 None:intergenic
TATCATGTCACCGAGTATCT+GGG 0.558059 6.3:-69538730 MS.gene041666:intron
AGCCAGATGATTCAGGGTGG+TGG 0.560576 6.3:-69540056 MS.gene041666:CDS
AAAATGTGATACTTGTCTCC+AGG 0.560708 6.3:+69538562 None:intergenic
GCCAGATATCGGTGATGCGA+GGG 0.561169 6.3:-69542503 MS.gene041666:CDS
TATTGGTGGTAGCAGTGAAG+GGG 0.562259 6.3:-69540297 MS.gene041666:CDS
AAACATCCACACCTGTGTGC+AGG 0.562424 6.3:+69538671 None:intergenic
AATACATTGCGACTTGAAGC+CGG 0.562519 6.3:-69537124 MS.gene041666:CDS
GAGACAACCTATTGAGGATG+AGG 0.563826 6.3:-69540822 MS.gene041666:CDS
AGTCGCAATGTATTAGTCCA+AGG 0.567368 6.3:+69537133 None:intergenic
GGTTACTAATATGTATGGAC+GGG 0.567780 6.3:-69540585 MS.gene041666:CDS
TCGCTCCAATTAATAGTCAA+CGG 0.569420 6.3:+69542310 None:intergenic
AACCTATTGAGGATGAGGCC+TGG 0.570582 6.3:-69540817 MS.gene041666:CDS
TAGGTATGAGGAAGGCTACA+GGG 0.571899 6.3:-69541003 MS.gene041666:CDS
ATTAGTAACCGTTATACCGA+TGG 0.573866 6.3:+69540598 None:intergenic
GGCTTATATGAAAGAGCAGG+TGG 0.574341 6.3:-69542482 MS.gene041666:CDS
GTTCCAGATCCTCAGGAAAG+AGG 0.578634 6.3:-69540734 MS.gene041666:CDS
ATCTTGGCAGAACTTTGTAC+CGG 0.579038 6.3:-69536925 MS.gene041666:CDS
GTTCTGCCAAGATGCATCCA+AGG 0.579553 6.3:+69536935 None:intergenic
CAGCTTAGCAGCCAATCCAT+CGG 0.580901 6.3:+69542276 None:intergenic
ATGATTAGGTCATTTGTCTG+AGG 0.582571 6.3:+69540464 None:intergenic
GCATTACAATTATTTAACCA+TGG 0.583609 6.3:+69540020 None:intergenic
GATTTAATGGCTCAATACGA+TGG 0.586468 6.3:-69540551 MS.gene041666:CDS
GTGCTCCTGAGGTTATTCTC+GGG 0.587936 6.3:-69536990 MS.gene041666:CDS
TCAAGCAAAGAATGTTGAGC+CGG 0.594717 6.3:-69540639 MS.gene041666:CDS
TGTTGCATTGGAGAAGCAGA+AGG 0.595508 6.3:-69542380 MS.gene041666:CDS
AGCCAGATATCGGTGATGCG+AGG 0.597832 6.3:-69542504 MS.gene041666:CDS
TCTGAACAGAATAGCATCTG+TGG 0.599024 6.3:-69542415 MS.gene041666:CDS
CTGGCAGGACCTCTTTCCTG+AGG 0.599853 6.3:+69540725 None:intergenic
GATCGTGATAGTGGACTTGG+GGG 0.600428 6.3:-69540257 MS.gene041666:CDS
GTGACAATGAAAAGGGGACC+GGG 0.600870 6.3:-69540766 MS.gene041666:CDS
AAGAGGTCCTGCCAGAGAGG+AGG 0.606513 6.3:-69540717 MS.gene041666:CDS
AGTTGGCTGTCCGTTAGTCA+AGG 0.608427 6.3:-69540977 MS.gene041666:CDS
TTAGTAACCGTTATACCGAT+GGG 0.611724 6.3:+69540599 None:intergenic
TGGAGAATTGATGGATGTAG+AGG 0.612656 6.3:-69540531 MS.gene041666:CDS
AGGTATGAGGAAGGCTACAG+GGG 0.617750 6.3:-69541002 MS.gene041666:CDS
CTACAGCCGATGTGAGGTGA+AGG 0.619012 6.3:-69537082 MS.gene041666:CDS
TGATTTAGGTGTCTCACAAG+AGG 0.624965 6.3:-69539763 MS.gene041666:CDS
TTCTGCCAAGATGCATCCAA+GGG 0.630562 6.3:+69536936 None:intergenic
GAGGGCTTATATGAAAGAGC+AGG 0.630789 6.3:-69542485 MS.gene041666:CDS
ATGAAATGCTTTCTTCGTGG+AGG 0.631843 6.3:-69539956 MS.gene041666:CDS
TAGTGGAAGATCACGACTCG+AGG 0.632611 6.3:-69540414 MS.gene041666:CDS
GGAAAGAGGTCCTGCCAGAG+AGG 0.633718 6.3:-69540720 MS.gene041666:CDS
CAGATCCTATCGTGCTCCTG+AGG 0.635682 6.3:-69537001 MS.gene041666:CDS
TGGCTATCTTTAAGAGACTG+AGG 0.636805 6.3:+69540074 None:intergenic
GAAAGCCCGAGAATAACCTC+AGG 0.637971 6.3:+69536985 None:intergenic
GTACATGAGACAACCTATTG+AGG 0.638206 6.3:-69540828 MS.gene041666:CDS
TCTGATGTATGGAAAGATTG+GGG 0.642236 6.3:-69542528 None:intergenic
GGATGAGAATAATGCTCATG+CGG 0.644136 6.3:-69539895 MS.gene041666:CDS
TAAAAGCTACAGCCGATGTG+AGG 0.648020 6.3:-69537088 MS.gene041666:CDS
AATTTAACAGAGAATCAGGA+GGG 0.648186 6.3:-69537946 MS.gene041666:CDS
CAAGTCCACTATCACGATCA+CGG 0.649638 6.3:+69540261 None:intergenic
AAAACCTGATACAAGATCAG+AGG 0.652743 6.3:+69540940 None:intergenic
ATCGGGTCAGATGATCCCAT+CGG 0.656979 6.3:-69540614 MS.gene041666:CDS
GATATCGGCAGTGAAGTGCA+TGG 0.658952 6.3:-69540326 MS.gene041666:CDS
CGTTAGTCAAGGAATATCAG+AGG 0.663259 6.3:-69540966 MS.gene041666:CDS
ATTTAACAGAGAATCAGGAG+GGG 0.672016 6.3:-69537945 MS.gene041666:CDS
TAAAATTATAAAGAACAACA+AGG 0.674441 6.3:-69538644 MS.gene041666:CDS
GCTTATATGAAAGAGCAGGT+GGG 0.681440 6.3:-69542481 MS.gene041666:CDS
CGGTTCAGTTAGGTCAATCG+GGG 0.686082 6.3:-69540372 MS.gene041666:CDS
CAATGACCTTCACCTCACAT+CGG 0.686191 6.3:+69537076 None:intergenic
AAATTTAACAGAGAATCAGG+AGG 0.687710 6.3:-69537947 MS.gene041666:CDS
CAAGCTCATGACCTGCACAC+AGG 0.691098 6.3:-69538682 MS.gene041666:CDS
ACCCTAGTGACAATGAAAAG+GGG 0.691112 6.3:-69540772 MS.gene041666:CDS
TCATGACCTGCACACAGGTG+TGG 0.696525 6.3:-69538677 MS.gene041666:CDS
GGAACTGAATCTGATGCACG+CGG 0.707621 6.3:-69540510 MS.gene041666:CDS
TGAAGAAGTTGACATTACAA+GGG 0.707878 6.3:-69539790 MS.gene041666:CDS
ATGGTTAAATAATTGTAATG+CGG 0.708492 6.3:-69540018 MS.gene041666:CDS
GGTATGAGGAAGGCTACAGG+GGG 0.710161 6.3:-69541001 MS.gene041666:CDS
ATCGTGATAGTGGACTTGGG+GGG 0.711647 6.3:-69540256 MS.gene041666:CDS
GATAGCCAGATGATTCAGGG+TGG 0.778676 6.3:-69540059 MS.gene041666:CDS
GAAATGGAAGATGATCAACA+CGG 0.810249 6.3:-69540392 MS.gene041666:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTATACATTAATTATTAAT+CGG - chr6.3:69539913-69539932 MS.gene041666:CDS 10.0%
!!! TTATATTTTATAACAAATTC+TGG + chr6.3:69541165-69541184 None:intergenic 10.0%
!! AAATAAAAGAGTTTAAATGA+AGG - chr6.3:69542018-69542037 MS.gene041666:intron 15.0%
!! AAGTTAAACAGATAAATATT+CGG + chr6.3:69540382-69540401 None:intergenic 15.0%
!! AATAAAAGAGTTTAAATGAA+GGG - chr6.3:69542019-69542038 MS.gene041666:intron 15.0%
!! GATAAATTTACAAAGTAAAT+AGG + chr6.3:69537987-69538006 None:intergenic 15.0%
!! TAAAATTATAAAGAACAACA+AGG - chr6.3:69540689-69540708 MS.gene041666:CDS 15.0%
!! TATTCACTTCATATATATAT+AGG - chr6.3:69542077-69542096 MS.gene041666:intron 15.0%
!!! AGTTTATTTTTAGTTTAGAA+TGG - chr6.3:69537896-69537915 MS.gene041666:intron 15.0%
!!! TAGTATTGTTATTTTCATTT+TGG - chr6.3:69541604-69541623 MS.gene041666:intron 15.0%
!!! TTTATTTTTAGATTGATTTG+AGG - chr6.3:69541933-69541952 MS.gene041666:intron 15.0%
!! AAAATAAGATGAAACTAAGA+TGG - chr6.3:69539969-69539988 MS.gene041666:CDS 20.0%
!! AAACAATCACAAATAATCTT+TGG + chr6.3:69538251-69538270 None:intergenic 20.0%
!! AACAATCACAAATAATCTTT+GGG + chr6.3:69538250-69538269 None:intergenic 20.0%
!! AAGAACTGAATTACATTATA+AGG - chr6.3:69541210-69541229 MS.gene041666:intron 20.0%
!! ATATATTATACTTACATTGC+CGG + chr6.3:69542430-69542449 None:intergenic 20.0%
!! ATGGTTAAATAATTGTAATG+CGG - chr6.3:69539315-69539334 MS.gene041666:intron 20.0%
!! ATTATTAACCAAGTGATTAA+TGG + chr6.3:69537516-69537535 None:intergenic 20.0%
!! CAATAAATAATGTGACATTA+AGG + chr6.3:69538074-69538093 None:intergenic 20.0%
!! TACCTAAAACATATACAAAT+AGG + chr6.3:69538316-69538335 None:intergenic 20.0%
!! TCAAGTTAAAATTACAATCT+AGG + chr6.3:69539815-69539834 None:intergenic 20.0%
!! TTATTAACCAAGTGATTAAT+GGG + chr6.3:69537515-69537534 None:intergenic 20.0%
!!! ATAATGCGTTATGTTTTTTA+TGG - chr6.3:69537347-69537366 MS.gene041666:intron 20.0%
!!! GCTTAAGTTTGAAAATTTTA+TGG + chr6.3:69542474-69542493 None:intergenic 20.0%
!!! TTAAGGAATAGAAAATTTTC+AGG + chr6.3:69540229-69540248 None:intergenic 20.0%
!!! TTACAGAATTTAAAACAACA+TGG + chr6.3:69540572-69540591 None:intergenic 20.0%
!!! TTTTTAATTTCTTGTCCAAT+AGG + chr6.3:69537128-69537147 None:intergenic 20.0%
!!! TTTTTTTCTTTCTTTTCACT+CGG - chr6.3:69539868-69539887 MS.gene041666:CDS 20.0%
! AAAATAAACTGACAAGAAGT+AGG + chr6.3:69537886-69537905 None:intergenic 25.0%
! ACTTTGCAAATCAATGAAAA+TGG + chr6.3:69539724-69539743 None:intergenic 25.0%
! AGGATTAAGATCAAATTTGA+AGG - chr6.3:69541986-69542005 MS.gene041666:intron 25.0%
! ATAACGGTTACTAATATGTA+TGG - chr6.3:69538743-69538762 MS.gene041666:intron 25.0%
! ATCGAAAACATTGTTGAAAT+TGG - chr6.3:69540324-69540343 MS.gene041666:CDS 25.0%
! ATGTCAAAATTCAATCCAAT+TGG + chr6.3:69537801-69537820 None:intergenic 25.0%
! CAAATAAAAACACATACTGA+AGG - chr6.3:69539223-69539242 MS.gene041666:intron 25.0%
! CATAAATTTAACAGAGAATC+AGG - chr6.3:69541383-69541402 MS.gene041666:intron 25.0%
! CGATTATCCAAATGAATATT+GGG - chr6.3:69538448-69538467 MS.gene041666:intron 25.0%
! GAAATTTACGTTGAGTAAAA+TGG - chr6.3:69537920-69537939 MS.gene041666:CDS 25.0%
! GCATTACAATTATTTAACCA+TGG + chr6.3:69539316-69539335 None:intergenic 25.0%
! GTTTAAATGAAGGGTAAAAT+TGG - chr6.3:69542028-69542047 MS.gene041666:intron 25.0%
! TATAAGAGAAACCATTAGAA+AGG - chr6.3:69541748-69541767 MS.gene041666:intron 25.0%
! TCGAAAACATTGTTGAAATT+GGG - chr6.3:69540325-69540344 MS.gene041666:CDS 25.0%
! TCGATTATCCAAATGAATAT+TGG - chr6.3:69538447-69538466 MS.gene041666:intron 25.0%
! TTCTTGTAAGAGCAAAATTA+AGG + chr6.3:69540246-69540265 None:intergenic 25.0%
! TTTAATTCAAGAGTCAGTTA+AGG - chr6.3:69541900-69541919 MS.gene041666:intron 25.0%
! TTTACTTATTGGATCTTATC+TGG - chr6.3:69537097-69537116 MS.gene041666:CDS 25.0%
! TTTATGAAACTCGTATAAGT+TGG + chr6.3:69541369-69541388 None:intergenic 25.0%
! TTTGTAGACTTCACTAAAAT+GGG - chr6.3:69537953-69537972 MS.gene041666:CDS 25.0%
!! ATTAAATTTTCCTGTTGCAT+TGG - chr6.3:69536941-69536960 MS.gene041666:CDS 25.0%
!! CTTTTAACCAAAATATTCTC+CGG + chr6.3:69542231-69542250 None:intergenic 25.0%
!! GACCTATTTGTATATGTTTT+AGG - chr6.3:69538311-69538330 MS.gene041666:intron 25.0%
!! TTTTGTAGACTTCACTAAAA+TGG - chr6.3:69537952-69537971 MS.gene041666:CDS 25.0%
!! TTTTTACCATTGGATCAATA+AGG + chr6.3:69540980-69540999 None:intergenic 25.0%
!!! ATCTGTATTTTAACAAAGCA+AGG + chr6.3:69540034-69540053 None:intergenic 25.0%
!!! CAACTACTGTTGATAATTAT+GGG - chr6.3:69539482-69539501 MS.gene041666:intron 25.0%
!!! GTTTTAAATTCTGTAATAGC+TGG - chr6.3:69540576-69540595 MS.gene041666:CDS 25.0%
!!! TTGTATATGTTTTAGGTATG+AGG - chr6.3:69538318-69538337 MS.gene041666:intron 25.0%
!!! TTTTTATGGTCTTAACTCTA+CGG - chr6.3:69537361-69537380 MS.gene041666:intron 25.0%
AAAAAAGCTACAGGAAACTT+TGG - chr6.3:69542054-69542073 MS.gene041666:intron 30.0%
AAACACTCTCATCATGATTT+CGG - chr6.3:69539103-69539122 MS.gene041666:intron 30.0%
AAATTTAACAGAGAATCAGG+AGG - chr6.3:69541386-69541405 MS.gene041666:intron 30.0%
AACCATTAGAAAGGATTTAG+AGG - chr6.3:69541757-69541776 MS.gene041666:intron 30.0%
AATCTTTGGGTATGTACAAA+TGG + chr6.3:69538237-69538256 None:intergenic 30.0%
AATTGGAAGAAAAAAGCTAC+AGG - chr6.3:69542045-69542064 MS.gene041666:intron 30.0%
AATTTAACAGAGAATCAGGA+GGG - chr6.3:69541387-69541406 MS.gene041666:intron 30.0%
ACAAATGACCTAATCATGTT+GGG - chr6.3:69538875-69538894 MS.gene041666:intron 30.0%
ATGAAGAAGTTGACATTACA+AGG - chr6.3:69539542-69539561 MS.gene041666:intron 30.0%
ATGACAAGAAGATTGATATC+TGG - chr6.3:69542373-69542392 MS.gene041666:CDS 30.0%
ATGGCTGAAAATAGTTAATG+TGG + chr6.3:69538218-69538237 None:intergenic 30.0%
ATTACAAGGGAAGATGATTT+AGG - chr6.3:69539556-69539575 MS.gene041666:intron 30.0%
CCATAATTATCAACAGTAGT+TGG + chr6.3:69539484-69539503 None:intergenic 30.0%
CGAAAACATTGTTGAAATTG+GGG - chr6.3:69540326-69540345 MS.gene041666:CDS 30.0%
CTATTCTTGAAATTGTTCCA+TGG - chr6.3:69540466-69540485 MS.gene041666:CDS 30.0%
CTTCAAAGCTATATTCAAAG+TGG - chr6.3:69541239-69541258 MS.gene041666:intron 30.0%
CTTCAGTATTTACATAACCT+TGG - chr6.3:69542183-69542202 MS.gene041666:intron 30.0%
GACAAGTCTTAATATAGAAG+TGG + chr6.3:69540859-69540878 None:intergenic 30.0%
GAGAACACAAATTTGAATCT+TGG + chr6.3:69537467-69537486 None:intergenic 30.0%
GAGTCGAATAAATATGTCAT+TGG - chr6.3:69539178-69539197 MS.gene041666:intron 30.0%
GGACAAGAAATTAAAAATGC+AGG - chr6.3:69537131-69537150 MS.gene041666:CDS 30.0%
GTCAATTACCATTCAATGTT+TGG - chr6.3:69542155-69542174 MS.gene041666:intron 30.0%
TAAGGGATGCTTAATTCATT+AGG - chr6.3:69537727-69537746 MS.gene041666:intron 30.0%
TAATGTGGGAAAACCTTAAT+CGG + chr6.3:69538203-69538222 None:intergenic 30.0%
TAATTCATTAGGCTTCTTTC+TGG - chr6.3:69537738-69537757 MS.gene041666:intron 30.0%
TCGAATAAATATGTCATTGG+AGG - chr6.3:69539181-69539200 MS.gene041666:intron 30.0%
TCTCTAATAGAGAAGAAAAG+CGG + chr6.3:69541528-69541547 None:intergenic 30.0%
TGAAGAAGTTGACATTACAA+GGG - chr6.3:69539543-69539562 MS.gene041666:intron 30.0%
TGATTTCGGAAAGAATTCTA+TGG - chr6.3:69539117-69539136 MS.gene041666:intron 30.0%
TGGCTGAAAATAGTTAATGT+GGG + chr6.3:69538217-69538236 None:intergenic 30.0%
TTGCAGCACATATTAGTATA+GGG + chr6.3:69541054-69541073 None:intergenic 30.0%
! ACAAAGCAAGGAATGTTTTA+CGG + chr6.3:69540022-69540041 None:intergenic 30.0%
! ATAAGCCGTTGACTATTAAT+TGG - chr6.3:69537018-69537037 MS.gene041666:CDS 30.0%
! CAATGAGTTGGATTCAAATA+TGG - chr6.3:69541781-69541800 MS.gene041666:intron 30.0%
! GAATGTTTTACGGATCAAAA+AGG + chr6.3:69540012-69540031 None:intergenic 30.0%
! GGCTAATGGTAATGATTTAA+TGG - chr6.3:69538769-69538788 MS.gene041666:intron 30.0%
! GTTAGGTAAATGCTTTTGTT+TGG - chr6.3:69538168-69538187 MS.gene041666:intron 30.0%
! GTTTCTCTTATAGTTTTCCT+AGG + chr6.3:69541740-69541759 None:intergenic 30.0%
! TCTTCTGACTTAATTTTCAC+AGG + chr6.3:69536999-69537018 None:intergenic 30.0%
! TGAGAAGTTTGATTTCATCA+AGG + chr6.3:69540731-69540750 None:intergenic 30.0%
!! AACAAAAGCATTTACCTAAC+TGG + chr6.3:69538168-69538187 None:intergenic 30.0%
!! ATATGTTTTAGGTATGAGGA+AGG - chr6.3:69538322-69538341 MS.gene041666:intron 30.0%
!! ATTTTCATTTTGGAGAGAGT+GGG - chr6.3:69541614-69541633 MS.gene041666:intron 30.0%
!! CCAACTACTGTTGATAATTA+TGG - chr6.3:69539481-69539500 MS.gene041666:intron 30.0%
!! TATTTTCATTTTGGAGAGAG+TGG - chr6.3:69541613-69541632 MS.gene041666:intron 30.0%
!!! TATGTTTTGTTGTTCAGAAC+TGG - chr6.3:69540525-69540544 MS.gene041666:CDS 30.0%
AAAACCTGATACAAGATCAG+AGG + chr6.3:69538396-69538415 None:intergenic 35.0%
AAAACCTTAATCGGTGAAAC+AGG + chr6.3:69538194-69538213 None:intergenic 35.0%
AAAATGTGATACTTGTCTCC+AGG + chr6.3:69540774-69540793 None:intergenic 35.0%
AAAGATAGCCAGATGATTCA+GGG - chr6.3:69539271-69539290 MS.gene041666:intron 35.0%
AAGAAGAGTAGATCAAATGG+AGG - chr6.3:69541685-69541704 MS.gene041666:intron 35.0%
AAGTGCTTCCAAACATTGAA+TGG + chr6.3:69542166-69542185 None:intergenic 35.0%
AATGTGTTCCTTTGTACACT+AGG - chr6.3:69537533-69537552 MS.gene041666:intron 35.0%
ACACAAATTTGAATCTTGGC+TGG + chr6.3:69537463-69537482 None:intergenic 35.0%
ACAGCGCATTGAGTTAATAA+TGG - chr6.3:69539946-69539965 MS.gene041666:CDS 35.0%
ACAGTCACAAACACATTAAG+TGG + chr6.3:69541124-69541143 None:intergenic 35.0%
ACATTCACTTTGATGCCAAT+TGG - chr6.3:69537783-69537802 MS.gene041666:intron 35.0%
ACTGGTAACCTTAATTGTCA+TGG + chr6.3:69538150-69538169 None:intergenic 35.0%
ATACAAATAGGTCAAAGTCG+TGG + chr6.3:69538304-69538323 None:intergenic 35.0%
ATGATTAGGTCATTTGTCTG+AGG + chr6.3:69538872-69538891 None:intergenic 35.0%
ATTAGTAACCGTTATACCGA+TGG + chr6.3:69538738-69538757 None:intergenic 35.0%
ATTTAACAGAGAATCAGGAG+GGG - chr6.3:69541388-69541407 MS.gene041666:intron 35.0%
ATTTAACCATGGCAACTTAC+TGG + chr6.3:69539305-69539324 None:intergenic 35.0%
ATTTCATGACTACTACACGA+GGG + chr6.3:69540125-69540144 None:intergenic 35.0%
CAACAAGATGAAAGAGATTC+AGG + chr6.3:69537862-69537881 None:intergenic 35.0%
CAATGGAAACGAATGAAAAG+TGG + chr6.3:69541301-69541320 None:intergenic 35.0%
CGGTTACTAATATGTATGGA+CGG - chr6.3:69538747-69538766 MS.gene041666:intron 35.0%
CGTAAGAAGAGTAGATCAAA+TGG - chr6.3:69541682-69541701 MS.gene041666:intron 35.0%
CTCTGATATTCCTTGACTAA+CGG + chr6.3:69538369-69538388 None:intergenic 35.0%
CTGAATCTCTTTCATCTTGT+TGG - chr6.3:69537860-69537879 MS.gene041666:intron 35.0%
CTGCAATAACAAATCAAGAC+AGG + chr6.3:69542136-69542155 None:intergenic 35.0%
GAAATGGAAGATGATCAACA+CGG - chr6.3:69538941-69538960 MS.gene041666:intron 35.0%
GACAAATGACCTAATCATGT+TGG - chr6.3:69538874-69538893 MS.gene041666:intron 35.0%
GACAATTAAGGTTACCAGTT+AGG - chr6.3:69538151-69538170 MS.gene041666:intron 35.0%
GACCTCTAAATCCTTTCTAA+TGG + chr6.3:69541762-69541781 None:intergenic 35.0%
GAGATTTATTGATCCAATGG+TGG + chr6.3:69540929-69540948 None:intergenic 35.0%
GATAGCATTTCAAAGCCAAA+AGG + chr6.3:69540499-69540518 None:intergenic 35.0%
GATTTAATGGCTCAATACGA+TGG - chr6.3:69538782-69538801 MS.gene041666:intron 35.0%
GGTGAGATTTATTGATCCAA+TGG + chr6.3:69540932-69540951 None:intergenic 35.0%
GGTTACTAATATGTATGGAC+GGG - chr6.3:69538748-69538767 MS.gene041666:intron 35.0%
GTGCACAATCTTTAGATTGA+AGG + chr6.3:69539662-69539681 None:intergenic 35.0%
GTTGCAGCACATATTAGTAT+AGG + chr6.3:69541055-69541074 None:intergenic 35.0%
TAAAGATAGCCAGATGATTC+AGG - chr6.3:69539270-69539289 MS.gene041666:intron 35.0%
TAACTTTATGCCATGTCAGA+AGG - chr6.3:69540396-69540415 MS.gene041666:CDS 35.0%
TACCCTAGTGACAATGAAAA+GGG - chr6.3:69538560-69538579 MS.gene041666:CDS 35.0%
TATCTACAACTAGCAAGCAA+TGG - chr6.3:69541482-69541501 MS.gene041666:intron 35.0%
TATGTCAATAAGCATGATCC+TGG - chr6.3:69540753-69540772 MS.gene041666:CDS 35.0%
TCAATACGATGGAGAATTGA+TGG - chr6.3:69538793-69538812 MS.gene041666:intron 35.0%
TCAATCTAAAGATTGTGCAC+AGG - chr6.3:69539662-69539681 MS.gene041666:intron 35.0%
TCAGAGTCCCAATATTCATT+TGG + chr6.3:69538458-69538477 None:intergenic 35.0%
TCGCTCCAATTAATAGTCAA+CGG + chr6.3:69537026-69537045 None:intergenic 35.0%
TCTCTATTAGAGACCATAGT+TGG - chr6.3:69541535-69541554 MS.gene041666:intron 35.0%
TCTTATCTGGATGTACCTAT+TGG - chr6.3:69537110-69537129 MS.gene041666:CDS 35.0%
TGATTAGGTCATTTGTCTGA+GGG + chr6.3:69538871-69538890 None:intergenic 35.0%
TGGTGTATCATAGAACACTA+TGG - chr6.3:69541801-69541820 MS.gene041666:intron 35.0%
TTACCCTAGTGACAATGAAA+AGG - chr6.3:69538559-69538578 MS.gene041666:CDS 35.0%
TTAGTAACCGTTATACCGAT+GGG + chr6.3:69538737-69538756 None:intergenic 35.0%
TTGATCTACTCTTCTTACGA+CGG + chr6.3:69541681-69541700 None:intergenic 35.0%
! CACAATGTGGTTTTTACCAT+TGG + chr6.3:69540990-69541009 None:intergenic 35.0%
! GAAGAGGATTCTTATTTCTC+TGG - chr6.3:69538659-69538678 MS.gene041666:CDS 35.0%
! GACTGTATGAATGCTTTTGA+GGG - chr6.3:69539349-69539368 MS.gene041666:intron 35.0%
! GTGTTAGAGGTACATGAAAA+TGG - chr6.3:69542515-69542534 MS.gene041666:CDS 35.0%
! TCTGACTTAATTTTCACAGG+AGG + chr6.3:69536996-69537015 None:intergenic 35.0%
! TGACTGTATGAATGCTTTTG+AGG - chr6.3:69539348-69539367 MS.gene041666:intron 35.0%
!! ATTGAGCCTTATTGATCCAA+TGG - chr6.3:69540971-69540990 MS.gene041666:CDS 35.0%
!! GAAGTGCATGGAAGTTTTAT+TGG - chr6.3:69539019-69539038 MS.gene041666:intron 35.0%
!! GGAAAAGTTCTGAATCATAG+TGG - chr6.3:69538902-69538921 MS.gene041666:intron 35.0%
!! TTTTCATTTTGGAGAGAGTG+GGG - chr6.3:69541615-69541634 MS.gene041666:intron 35.0%
AACACACTCCTAGTGTACAA+AGG + chr6.3:69537544-69537563 None:intergenic 40.0%
AAGATTGATATCTGGTCCCT+TGG - chr6.3:69542381-69542400 MS.gene041666:CDS 40.0%
AAGCATCCCTTAAAACATCC+AGG + chr6.3:69537719-69537738 None:intergenic 40.0%
AATACATTGCGACTTGAAGC+CGG - chr6.3:69542209-69542228 MS.gene041666:CDS 40.0%
ACAAACACATTAAGTGGCTG+TGG + chr6.3:69541118-69541137 None:intergenic 40.0%
ACAAGCTTATTTGCCACCAT+TGG - chr6.3:69540913-69540932 MS.gene041666:CDS 40.0%
ACCCTAGTGACAATGAAAAG+GGG - chr6.3:69538561-69538580 MS.gene041666:CDS 40.0%
ACTCTACAAACCTGCAATCT+TGG + chr6.3:69541431-69541450 None:intergenic 40.0%
AGAGCAGGTAAGGCAAATAA+AGG - chr6.3:69539615-69539634 MS.gene041666:intron 40.0%
AGAGCATGTCAAGCTAGAAA+AGG - chr6.3:69539516-69539535 MS.gene041666:intron 40.0%
AGATGATCCCATCGGTATAA+CGG - chr6.3:69538727-69538746 MS.gene041666:intron 40.0%
AGATTGTGCACAGGAAAAAC+AGG - chr6.3:69539671-69539690 MS.gene041666:intron 40.0%
AGCATCCCTTAAAACATCCA+GGG + chr6.3:69537718-69537737 None:intergenic 40.0%
AGTCGCAATGTATTAGTCCA+AGG + chr6.3:69542203-69542222 None:intergenic 40.0%
ATCTTGGCAGAACTTTGTAC+CGG - chr6.3:69542408-69542427 MS.gene041666:CDS 40.0%
ATGAAATGCTTTCTTCGTGG+AGG - chr6.3:69539377-69539396 MS.gene041666:intron 40.0%
ATGATCAACACGGTTCAGTT+AGG - chr6.3:69538951-69538970 MS.gene041666:intron 40.0%
ATGTTATACAGTCTCGCGTA+CGG + chr6.3:69540281-69540300 None:intergenic 40.0%
CAGTTAAGGATGAATCGTAC+AGG + chr6.3:69537489-69537508 None:intergenic 40.0%
CCAAAATCCAGGTAATTGGA+GGG + chr6.3:69537407-69537426 None:intergenic 40.0%
CGTTAGTCAAGGAATATCAG+AGG - chr6.3:69538367-69538386 MS.gene041666:intron 40.0%
CTGATGAAATGCTTTCTTCG+TGG - chr6.3:69539374-69539393 MS.gene041666:intron 40.0%
CTGTACGATTCATCCTTAAC+TGG - chr6.3:69537487-69537506 MS.gene041666:intron 40.0%
CTTAATTGTCATGGTCCACT+GGG + chr6.3:69538141-69538160 None:intergenic 40.0%
GAAGTTTGAATCCGATGGAT+TGG - chr6.3:69537046-69537065 MS.gene041666:CDS 40.0%
GAATGTTAAGCTTGAGGCTT+TGG - chr6.3:69541565-69541584 MS.gene041666:intron 40.0%
GATACCTCTGATCTTGTATC+AGG - chr6.3:69538389-69538408 MS.gene041666:intron 40.0%
GATTTCATGACTACTACACG+AGG + chr6.3:69540126-69540145 None:intergenic 40.0%
GCTGACAGCTCTTTACTTAT+TGG - chr6.3:69537086-69537105 MS.gene041666:CDS 40.0%
GCTTATATGAAAGAGCAGGT+GGG - chr6.3:69536852-69536871 MS.gene041666:intron 40.0%
GGATGAGAATAATGCTCATG+CGG - chr6.3:69539438-69539457 MS.gene041666:intron 40.0%
GGATTTAGAGGTCAATGAGT+TGG - chr6.3:69541769-69541788 MS.gene041666:intron 40.0%
GGCTTAGGATCTTGATTTAG+TGG - chr6.3:69537313-69537332 MS.gene041666:intron 40.0%
GGTAAAAACCACATTGTGCA+TGG - chr6.3:69540992-69541011 MS.gene041666:CDS 40.0%
GTACATGAGACAACCTATTG+AGG - chr6.3:69538505-69538524 MS.gene041666:intron 40.0%
TATCATGTCACCGAGTATCT+GGG - chr6.3:69540603-69540622 MS.gene041666:CDS 40.0%
TATTTCCGTGATCGTGATAG+TGG - chr6.3:69539067-69539086 MS.gene041666:intron 40.0%
TCAAGCAAAGAATGTTGAGC+CGG - chr6.3:69538694-69538713 MS.gene041666:CDS 40.0%
TCTGAACAGAATAGCATCTG+TGG - chr6.3:69536918-69536937 MS.gene041666:intron 40.0%
TCTGCAATTTCCCTCTTTCT+GGG - chr6.3:69537292-69537311 MS.gene041666:intron 40.0%
TGAAAGAGATTCAGGTGCTA+AGG + chr6.3:69537854-69537873 None:intergenic 40.0%
TGATTTAGGTGTCTCACAAG+AGG - chr6.3:69539570-69539589 MS.gene041666:intron 40.0%
TGGCGTAATTTGATCCATGT+AGG - chr6.3:69541821-69541840 MS.gene041666:intron 40.0%
TTCACCCGAGAAAAGTTCTA+GGG - chr6.3:69539417-69539436 MS.gene041666:intron 40.0%
TTCCATCTCCCAACATGATT+AGG + chr6.3:69538886-69538905 None:intergenic 40.0%
! AGTTGGGAGAGCTTTTTACT+TGG - chr6.3:69536878-69536897 MS.gene041666:intron 40.0%
! CACGTCTATTTTCGTGTTAG+AGG - chr6.3:69542502-69542521 MS.gene041666:CDS 40.0%
! CTCATCCCTAGAACTTTTCT+CGG + chr6.3:69539425-69539444 None:intergenic 40.0%
! CTTGAAGCCGGAGAATATTT+TGG - chr6.3:69542221-69542240 MS.gene041666:CDS 40.0%
! CTTGTAGCTGTTTCACCTTT+GGG - chr6.3:69537214-69537233 MS.gene041666:intron 40.0%
! GTATCAGGTTTTGCTACAGT+TGG - chr6.3:69538404-69538423 MS.gene041666:intron 40.0%
! GTTGGGAGAGCTTTTTACTT+GGG - chr6.3:69536879-69536898 MS.gene041666:intron 40.0%
! TCATCCCTAGAACTTTTCTC+GGG + chr6.3:69539424-69539443 None:intergenic 40.0%
! TCCCCTTTTCATTGTCACTA+GGG + chr6.3:69538565-69538584 None:intergenic 40.0%
! TCTTGTAGCTGTTTCACCTT+TGG - chr6.3:69537213-69537232 MS.gene041666:intron 40.0%
! TGGAGAATTGATGGATGTAG+AGG - chr6.3:69538802-69538821 MS.gene041666:intron 40.0%
! TGGCTATCTTTAAGAGACTG+AGG + chr6.3:69539262-69539281 None:intergenic 40.0%
! TTATTGGTGGTAGCAGTGAA+GGG - chr6.3:69539035-69539054 MS.gene041666:intron 40.0%
! TTCCATGGTGTTTCTCCTTT+TGG - chr6.3:69540481-69540500 MS.gene041666:CDS 40.0%
! TTGGGAGAGCTTTTTACTTG+GGG - chr6.3:69536880-69536899 MS.gene041666:intron 40.0%
! TTGTAGCTGTTTCACCTTTG+GGG - chr6.3:69537215-69537234 MS.gene041666:intron 40.0%
! TTTATTGGTGGTAGCAGTGA+AGG - chr6.3:69539034-69539053 MS.gene041666:intron 40.0%
! TTTTACTTGGGGAAGTTGCA+CGG - chr6.3:69536891-69536910 MS.gene041666:intron 40.0%
!! AATATGTATGGACGGGCTAA+TGG - chr6.3:69538755-69538774 MS.gene041666:intron 40.0%
!! TGATTAATGGGCTCCAGTTA+AGG + chr6.3:69537503-69537522 None:intergenic 40.0%
!! TTTGCGAGTTGGATTTTGCA+GGG - chr6.3:69537562-69537581 MS.gene041666:intron 40.0%
!!! GTGCATGGAAGTTTTATTGG+TGG - chr6.3:69539022-69539041 MS.gene041666:intron 40.0%
!!! GTTTTGCTACAGTTGGTGAT+GGG - chr6.3:69538411-69538430 MS.gene041666:intron 40.0%
!!! TGTGCATGGTAGTTGGTTTT+TGG + chr6.3:69537695-69537714 None:intergenic 40.0%
AACAGTGATGCTGCCGATAT+CGG - chr6.3:69538992-69539011 MS.gene041666:intron 45.0%
AAGAATGTTGAGCCGGTCAT+CGG - chr6.3:69538701-69538720 MS.gene041666:CDS 45.0%
AAGATCACGACTCGAGGAAA+TGG - chr6.3:69538925-69538944 MS.gene041666:intron 45.0%
AAGATCCTAAGCCCAGAAAG+AGG + chr6.3:69537306-69537325 None:intergenic 45.0%
AAGGCAAATAAAGGCTCAGG+AGG - chr6.3:69539624-69539643 MS.gene041666:intron 45.0%
AATCCAGGTAATTGGAGGGA+AGG + chr6.3:69537403-69537422 None:intergenic 45.0%
ACAGTAATTTGAGCCCCCAA+AGG + chr6.3:69537232-69537251 None:intergenic 45.0%
ACGGTTCAGTTAGGTCAATC+GGG - chr6.3:69538960-69538979 MS.gene041666:intron 45.0%
ACTGGAGCCCATTAATCACT+TGG - chr6.3:69537505-69537524 MS.gene041666:intron 45.0%
AGATCAAATGGAGGAGAGTC+AGG - chr6.3:69541694-69541713 MS.gene041666:intron 45.0%
AGATCCTAAGCCCAGAAAGA+GGG + chr6.3:69537305-69537324 None:intergenic 45.0%
AGATTGGGGAAGCCAGATAT+CGG - chr6.3:69536819-69536838 MS.gene041666:intron 45.0%
AGCCAAAAGGAGAAACACCA+TGG + chr6.3:69540486-69540505 None:intergenic 45.0%
AGCCTCAAGCTTAACATTCG+TGG + chr6.3:69541564-69541583 None:intergenic 45.0%
AGCGAGAAGTTTGAATCCGA+TGG - chr6.3:69537041-69537060 MS.gene041666:CDS 45.0%
AGTGACAATGAAAAGGGGAC+CGG - chr6.3:69538566-69538585 MS.gene041666:CDS 45.0%
ATCCAGGTAATTGGAGGGAA+GGG + chr6.3:69537402-69537421 None:intergenic 45.0%
ATGCACTTCACTGCCGATAT+CGG + chr6.3:69539008-69539027 None:intergenic 45.0%
ATGTTCCTGCAGTGCAACAA+TGG + chr6.3:69541318-69541337 None:intergenic 45.0%
ATTTCCCTCTTTCTGGGCTT+AGG - chr6.3:69537298-69537317 MS.gene041666:intron 45.0%
CAAGTCCACTATCACGATCA+CGG + chr6.3:69539075-69539094 None:intergenic 45.0%
CAATGACCTTCACCTCACAT+CGG + chr6.3:69542260-69542279 None:intergenic 45.0%
CACGGTTCAGTTAGGTCAAT+CGG - chr6.3:69538959-69538978 MS.gene041666:intron 45.0%
CCAGCCAAAATCCAGGTAAT+TGG + chr6.3:69537411-69537430 None:intergenic 45.0%
CCAGTGGACCATGACAATTA+AGG - chr6.3:69538139-69538158 MS.gene041666:intron 45.0%
CCTTAATTGTCATGGTCCAC+TGG + chr6.3:69538142-69538161 None:intergenic 45.0%
CGATCAATCTTTCGCTGAAG+AGG - chr6.3:69538643-69538662 MS.gene041666:CDS 45.0%
CTATCATGTCACCGAGTATC+TGG - chr6.3:69540602-69540621 MS.gene041666:CDS 45.0%
CTCAAGCTTAACATTCGTGG+AGG + chr6.3:69541561-69541580 None:intergenic 45.0%
CTCCACGAATGTTAAGCTTG+AGG - chr6.3:69541559-69541578 MS.gene041666:intron 45.0%
CTCTGCAATTTCCCTCTTTC+TGG - chr6.3:69537291-69537310 MS.gene041666:intron 45.0%
CTTCACAATGCCAAGATTGC+AGG - chr6.3:69541418-69541437 MS.gene041666:intron 45.0%
CTTCACCCGAGAAAAGTTCT+AGG - chr6.3:69539416-69539435 MS.gene041666:intron 45.0%
GACCTAATCATGTTGGGAGA+TGG - chr6.3:69538881-69538900 MS.gene041666:intron 45.0%
GAGACAACCTATTGAGGATG+AGG - chr6.3:69538511-69538530 MS.gene041666:intron 45.0%
GAGGGCTTATATGAAAGAGC+AGG - chr6.3:69536848-69536867 MS.gene041666:intron 45.0%
GAGGTGAAGGTCATTGATCT+TGG - chr6.3:69542264-69542283 MS.gene041666:CDS 45.0%
GATTTCATGCGCCAAAAACC+AGG + chr6.3:69538537-69538556 None:intergenic 45.0%
GCAAGCAATGGACATTGACA+TGG - chr6.3:69541494-69541513 MS.gene041666:intron 45.0%
GCCAAAATCCAGGTAATTGG+AGG + chr6.3:69537408-69537427 None:intergenic 45.0%
GCCAAGTCTATTGTGCACAA+GGG + chr6.3:69541032-69541051 None:intergenic 45.0%
GGCTTATATGAAAGAGCAGG+TGG - chr6.3:69536851-69536870 MS.gene041666:intron 45.0%
GGTAAGGCAAATAAAGGCTC+AGG - chr6.3:69539621-69539640 MS.gene041666:intron 45.0%
GGTAAGTAAAACCTGGCCAA+GGG - chr6.3:69537432-69537451 MS.gene041666:intron 45.0%
GTGGAGGGGAAGACTTTAAA+GGG - chr6.3:69537587-69537606 MS.gene041666:intron 45.0%
TAAAACATCCAGGGTGTGCA+TGG + chr6.3:69537709-69537728 None:intergenic 45.0%
TAAAAGCTACAGCCGATGTG+AGG - chr6.3:69542245-69542264 MS.gene041666:CDS 45.0%
TAGGTATGAGGAAGGCTACA+GGG - chr6.3:69538330-69538349 MS.gene041666:intron 45.0%
TCCCTTGTGCACAATAGACT+TGG - chr6.3:69541028-69541047 MS.gene041666:intron 45.0%
TCTTCTTACGACGGCATCTA+CGG + chr6.3:69541672-69541691 None:intergenic 45.0%
TGTGGAGGGGAAGACTTTAA+AGG - chr6.3:69537586-69537605 MS.gene041666:intron 45.0%
TGTTGCATTGGAGAAGCAGA+AGG - chr6.3:69536953-69536972 MS.gene041666:CDS 45.0%
TTAGGTATGAGGAAGGCTAC+AGG - chr6.3:69538329-69538348 MS.gene041666:intron 45.0%
TTCTGCCAAGATGCATCCAA+GGG + chr6.3:69542400-69542419 None:intergenic 45.0%
TTCTGCTTCTCCAATGCAAC+AGG + chr6.3:69536954-69536973 None:intergenic 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr6.3:69541850-69541869 None:intergenic 45.0%
! AATAACCTCAGGAGCACGAT+AGG + chr6.3:69542340-69542359 None:intergenic 45.0%
! AGTTGGATTTTGCAGGGTTG+TGG - chr6.3:69537568-69537587 MS.gene041666:intron 45.0%
! ATTTTCACAGGAGGAAGCCT+TGG + chr6.3:69536987-69537006 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr6.3:69541851-69541870 None:intergenic 45.0%
! CCCTCCAATTACCTGGATTT+TGG - chr6.3:69537404-69537423 MS.gene041666:intron 45.0%
! GATACTCGGTGACATGATAG+CGG + chr6.3:69540602-69540621 None:intergenic 45.0%
! GTCCCCTTTTCATTGTCACT+AGG + chr6.3:69538566-69538585 None:intergenic 45.0%
! TATTGGTGGTAGCAGTGAAG+GGG - chr6.3:69539036-69539055 MS.gene041666:intron 45.0%
! TGCACACCCTGGATGTTTTA+AGG - chr6.3:69537709-69537728 MS.gene041666:intron 45.0%
! TGTAGCTGTTTCACCTTTGG+GGG - chr6.3:69537216-69537235 MS.gene041666:intron 45.0%
! TTGGCCTGTTTCACCGATTA+AGG - chr6.3:69538187-69538206 MS.gene041666:intron 45.0%
!! AGCAGAAGGAAGAGTATCCA+AGG - chr6.3:69536967-69536986 MS.gene041666:CDS 45.0%
!! CCAATTACCTGGATTTTGGC+TGG - chr6.3:69537408-69537427 MS.gene041666:intron 45.0%
!! GCACACCCTGGATGTTTTAA+GGG - chr6.3:69537710-69537729 MS.gene041666:intron 45.0%
!! GTGATCGTGATAGTGGACTT+GGG - chr6.3:69539074-69539093 MS.gene041666:intron 45.0%
!! GTTGTTCAGAACTGGCTTTG+AGG - chr6.3:69540533-69540552 MS.gene041666:CDS 45.0%
!! GTTTGCGAGTTGGATTTTGC+AGG - chr6.3:69537561-69537580 MS.gene041666:intron 45.0%
!! TGATCGTGATAGTGGACTTG+GGG - chr6.3:69539075-69539094 MS.gene041666:intron 45.0%
!!! ATTACCTGGATTTTGGCTGG+CGG - chr6.3:69537411-69537430 MS.gene041666:intron 45.0%
!!! GGTTTTGCTACAGTTGGTGA+TGG - chr6.3:69538410-69538429 MS.gene041666:intron 45.0%
!! ATATTAAATTAAATGAAATA+TGG + chr6.3:69540953-69540972 None:intergenic 5.0%
!! TTAATAATTTAATAATATCA+CGG + chr6.3:69537168-69537187 None:intergenic 5.0%
!!! ATTTGATTTAAAATTAATTA+AGG - chr6.3:69541966-69541985 MS.gene041666:intron 5.0%
AAACATCCACACCTGTGTGC+AGG + chr6.3:69540665-69540684 None:intergenic 50.0%
AAAGAGCAGGTGGGTGAAGT+TGG - chr6.3:69536861-69536880 MS.gene041666:intron 50.0%
AACCACCACCCTGAATCATC+TGG + chr6.3:69539282-69539301 None:intergenic 50.0%
AACCAGGCCTCATCCTCAAT+AGG + chr6.3:69538521-69538540 None:intergenic 50.0%
AACCTATTGAGGATGAGGCC+TGG - chr6.3:69538516-69538535 MS.gene041666:intron 50.0%
AAGAGCAGGTGGGTGAAGTT+GGG - chr6.3:69536862-69536881 MS.gene041666:intron 50.0%
ACATTCGTGGAGGCCAACTA+TGG + chr6.3:69541551-69541570 None:intergenic 50.0%
AGAATGTTGAGCCGGTCATC+GGG - chr6.3:69538702-69538721 MS.gene041666:CDS 50.0%
AGAGTGGGGCTTAGATGGTT+TGG - chr6.3:69541629-69541648 MS.gene041666:intron 50.0%
AGGTATGAGGAAGGCTACAG+GGG - chr6.3:69538331-69538350 MS.gene041666:intron 50.0%
AGTCAGGTCAGAGGAGGTAA+AGG - chr6.3:69541710-69541729 MS.gene041666:intron 50.0%
AGTTGGCTGTCCGTTAGTCA+AGG - chr6.3:69538356-69538375 MS.gene041666:intron 50.0%
ATCGGGTCAGATGATCCCAT+CGG - chr6.3:69538719-69538738 MS.gene041666:intron 50.0%
ATCTTGGCTGGAACAACCCT+TGG + chr6.3:69537451-69537470 None:intergenic 50.0%
ATGCAGACGACGACGATGTT+GGG - chr6.3:69538483-69538502 MS.gene041666:intron 50.0%
ATTCGAGTAGTCCTGTGCTC+TGG - chr6.3:69540177-69540196 MS.gene041666:CDS 50.0%
CAGCTTAGCAGCCAATCCAT+CGG + chr6.3:69537060-69537079 None:intergenic 50.0%
CAGGTGCTAAGGCTAGTAAG+TGG + chr6.3:69537843-69537862 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr6.3:69541849-69541868 MS.gene041666:intron 50.0%
CGGTAAGTAAAACCTGGCCA+AGG - chr6.3:69537431-69537450 MS.gene041666:intron 50.0%
CGGTTCAGTTAGGTCAATCG+GGG - chr6.3:69538961-69538980 MS.gene041666:intron 50.0%
CGTGCTCCTGAGGTTATTCT+CGG - chr6.3:69542342-69542361 MS.gene041666:CDS 50.0%
CGTTTCCATTGTTGCACTGC+AGG - chr6.3:69541310-69541329 MS.gene041666:intron 50.0%
CTTCTTACGACGGCATCTAC+GGG + chr6.3:69541671-69541690 None:intergenic 50.0%
GAAAGCCCGAGAATAACCTC+AGG + chr6.3:69542351-69542370 None:intergenic 50.0%
GAGGAGGTAAAGGAAGACCT+AGG - chr6.3:69541720-69541739 MS.gene041666:intron 50.0%
GAGTGGGGCTTAGATGGTTT+GGG - chr6.3:69541630-69541649 MS.gene041666:intron 50.0%
GATAGCCAGATGATTCAGGG+TGG - chr6.3:69539274-69539293 MS.gene041666:intron 50.0%
GATATCGGCAGTGAAGTGCA+TGG - chr6.3:69539007-69539026 MS.gene041666:intron 50.0%
GCAAATAAAGGCTCAGGAGG+AGG - chr6.3:69539627-69539646 MS.gene041666:intron 50.0%
GCTCATTGAGCCTTCTGACA+TGG + chr6.3:69540409-69540428 None:intergenic 50.0%
GGAACTGAATCTGATGCACG+CGG - chr6.3:69538823-69538842 MS.gene041666:intron 50.0%
GGCCAAGTCTATTGTGCACA+AGG + chr6.3:69541033-69541052 None:intergenic 50.0%
GTCTTGCACCATGCACAATG+TGG + chr6.3:69541003-69541022 None:intergenic 50.0%
GTGACAATGAAAAGGGGACC+GGG - chr6.3:69538567-69538586 MS.gene041666:CDS 50.0%
GTGCAGGTCATGAGCTTGTA+TGG + chr6.3:69540649-69540668 None:intergenic 50.0%
GTGCTCCTGAGGTTATTCTC+GGG - chr6.3:69542343-69542362 MS.gene041666:CDS 50.0%
GTGGTTCCAGTAAGTTGCCA+TGG - chr6.3:69539296-69539315 MS.gene041666:intron 50.0%
GTTCCAGATCCTCAGGAAAG+AGG - chr6.3:69538599-69538618 MS.gene041666:CDS 50.0%
GTTCTGCCAAGATGCATCCA+AGG + chr6.3:69542401-69542420 None:intergenic 50.0%
TAGTGGAAGATCACGACTCG+AGG - chr6.3:69538919-69538938 MS.gene041666:intron 50.0%
TATGCAGACGACGACGATGT+TGG - chr6.3:69538482-69538501 MS.gene041666:intron 50.0%
TCAAGTGTCATCCAGAGCAC+AGG + chr6.3:69540191-69540210 None:intergenic 50.0%
TCAGTTAGGTCAATCGGGGT+GGG - chr6.3:69538965-69538984 MS.gene041666:intron 50.0%
TCCAGGTAATTGGAGGGAAG+GGG + chr6.3:69537401-69537420 None:intergenic 50.0%
TGCAGCAGATCCCAGATACT+CGG + chr6.3:69540616-69540635 None:intergenic 50.0%
TTCAGTTAGGTCAATCGGGG+TGG - chr6.3:69538964-69538983 MS.gene041666:intron 50.0%
TTGATCGTCATCCTCCTCTC+TGG + chr6.3:69538630-69538649 None:intergenic 50.0%
! ATCTGGAACACTTCCATGCC+CGG + chr6.3:69538588-69538607 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr6.3:69541852-69541871 None:intergenic 50.0%
! CTAGGAGTGTGTTTGCGAGT+TGG - chr6.3:69537551-69537570 MS.gene041666:intron 50.0%
! GATTTTGCAGGGTTGTGGAG+GGG - chr6.3:69537573-69537592 MS.gene041666:intron 50.0%
! GGATTTTGCAGGGTTGTGGA+GGG - chr6.3:69537572-69537591 MS.gene041666:intron 50.0%
! TCCACTGGGATTAGCACAGA+GGG + chr6.3:69538127-69538146 None:intergenic 50.0%
! TGGATTTTGCAGGGTTGTGG+AGG - chr6.3:69537571-69537590 MS.gene041666:intron 50.0%
!! ATCGTGATAGTGGACTTGGG+GGG - chr6.3:69539077-69539096 MS.gene041666:intron 50.0%
!! CGTGATCGTGATAGTGGACT+TGG - chr6.3:69539073-69539092 MS.gene041666:intron 50.0%
!! GATCGTGATAGTGGACTTGG+GGG - chr6.3:69539076-69539095 MS.gene041666:intron 50.0%
!! GTTCAGAACTGGCTTTGAGG+AGG - chr6.3:69540536-69540555 MS.gene041666:CDS 50.0%
!! TGAGGATGAGGCCTGGTTTT+TGG - chr6.3:69538523-69538542 MS.gene041666:intron 50.0%
!! TGGAAGTGTTCCAGATCCTC+AGG - chr6.3:69538592-69538611 MS.gene041666:CDS 50.0%
AATGAAAAGGGGACCGGGCA+TGG - chr6.3:69538572-69538591 MS.gene041666:CDS 55.0%
ACCAACTACCATGCACACCC+TGG - chr6.3:69537698-69537717 MS.gene041666:intron 55.0%
ACTAAGTGGGGTCGCCTACA+TGG + chr6.3:69541838-69541857 None:intergenic 55.0%
AGCCAGATATCGGTGATGCG+AGG - chr6.3:69536829-69536848 MS.gene041666:intron 55.0%
AGCCAGATGATTCAGGGTGG+TGG - chr6.3:69539277-69539296 MS.gene041666:intron 55.0%
ATGGAGGAGAGTCAGGTCAG+AGG - chr6.3:69541701-69541720 MS.gene041666:intron 55.0%
ATGTAGGCGACCCCACTTAG+TGG - chr6.3:69541837-69541856 MS.gene041666:intron 55.0%
CAAGCTCATGACCTGCACAC+AGG - chr6.3:69540651-69540670 MS.gene041666:CDS 55.0%
CAGATCCTATCGTGCTCCTG+AGG - chr6.3:69542332-69542351 MS.gene041666:CDS 55.0%
CCAGGTAATTGGAGGGAAGG+GGG + chr6.3:69537400-69537419 None:intergenic 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr6.3:69541844-69541863 MS.gene041666:intron 55.0%
CTACAGCCGATGTGAGGTGA+AGG - chr6.3:69542251-69542270 MS.gene041666:CDS 55.0%
CTGCTGTGCAAGAGCAGGTA+AGG - chr6.3:69539605-69539624 MS.gene041666:intron 55.0%
CTGGTCCCTTGGATGCATCT+TGG - chr6.3:69542392-69542411 MS.gene041666:CDS 55.0%
CTTACCGCCAGCCAAAATCC+AGG + chr6.3:69537418-69537437 None:intergenic 55.0%
GATTGCTGCTGTGCAAGAGC+AGG - chr6.3:69539600-69539619 MS.gene041666:intron 55.0%
GCCAGATATCGGTGATGCGA+GGG - chr6.3:69536830-69536849 MS.gene041666:intron 55.0%
GGACCTCTTTCCTGAGGATC+TGG + chr6.3:69538605-69538624 None:intergenic 55.0%
GGATCATCTGACCCGATGAC+CGG + chr6.3:69538716-69538735 None:intergenic 55.0%
GGCTGGCGGTAAGTAAAACC+TGG - chr6.3:69537425-69537444 MS.gene041666:intron 55.0%
GGTATGAGGAAGGCTACAGG+GGG - chr6.3:69538332-69538351 MS.gene041666:intron 55.0%
TCATGACCTGCACACAGGTG+TGG - chr6.3:69540656-69540675 MS.gene041666:CDS 55.0%
TCCAGGGTGTGCATGGTAGT+TGG + chr6.3:69537702-69537721 None:intergenic 55.0%
TGGAGAGAGTGGGGCTTAGA+TGG - chr6.3:69541624-69541643 MS.gene041666:intron 55.0%
TGTAGGCGACCCCACTTAGT+GGG - chr6.3:69541838-69541857 MS.gene041666:intron 55.0%
! CCACTGGGATTAGCACAGAG+GGG + chr6.3:69538126-69538145 None:intergenic 55.0%
! CTCAGGAGCACGATAGGATC+TGG + chr6.3:69542334-69542353 None:intergenic 55.0%
! GTCCACTGGGATTAGCACAG+AGG + chr6.3:69538128-69538147 None:intergenic 55.0%
!! CGATGGATTGGCTGCTAAGC+TGG - chr6.3:69537058-69537077 MS.gene041666:CDS 55.0%
AAGAGGTCCTGCCAGAGAGG+AGG - chr6.3:69538616-69538635 MS.gene041666:CDS 60.0%
CCCCCTTCCCTCCAATTACC+TGG - chr6.3:69537397-69537416 MS.gene041666:intron 60.0%
CCCCTCTGTGCTAATCCCAG+TGG - chr6.3:69538123-69538142 MS.gene041666:intron 60.0%
CTGGCAGGACCTCTTTCCTG+AGG + chr6.3:69538611-69538630 None:intergenic 60.0%
GAGGAGAGTCAGGTCAGAGG+AGG - chr6.3:69541704-69541723 MS.gene041666:intron 60.0%
GCCCTCGCATCACCGATATC+TGG + chr6.3:69536834-69536853 None:intergenic 60.0%
GGAAAGAGGTCCTGCCAGAG+AGG - chr6.3:69538613-69538632 MS.gene041666:CDS 60.0%
TCGTCATCCTCCTCTCTGGC+AGG + chr6.3:69538626-69538645 None:intergenic 60.0%
TGATGCACGCGGAACCTGTC+TGG - chr6.3:69538834-69538853 MS.gene041666:intron 60.0%
CACGCGGAACCTGTCTGGCA+GGG - chr6.3:69538839-69538858 MS.gene041666:intron 65.0%
GGAAGGCTACAGGGGGCAGT+TGG - chr6.3:69538339-69538358 MS.gene041666:intron 65.0%
GGCTGGAACAACCCTTGGCC+AGG + chr6.3:69537446-69537465 None:intergenic 65.0%
GGGACAAAGCCCTGCCAGAC+AGG + chr6.3:69538851-69538870 None:intergenic 65.0%
GCACGCGGAACCTGTCTGGC+AGG - chr6.3:69538838-69538857 MS.gene041666:intron 70.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 69536813 69542542 69536813 ID=MS.gene041666
chr6.3 mRNA 69536813 69542542 69536813 ID=MS.gene041666.t1;Parent=MS.gene041666
chr6.3 exon 69542203 69542542 69542203 ID=MS.gene041666.t1.exon1;Parent=MS.gene041666.t1
chr6.3 CDS 69542203 69542542 69542203 ID=cds.MS.gene041666.t1;Parent=MS.gene041666.t1
chr6.3 exon 69539734 69541022 69539734 ID=MS.gene041666.t1.exon2;Parent=MS.gene041666.t1
chr6.3 CDS 69539734 69541022 69539734 ID=cds.MS.gene041666.t1;Parent=MS.gene041666.t1
chr6.3 exon 69538534 69538737 69538534 ID=MS.gene041666.t1.exon3;Parent=MS.gene041666.t1
chr6.3 CDS 69538534 69538737 69538534 ID=cds.MS.gene041666.t1;Parent=MS.gene041666.t1
chr6.3 exon 69537916 69538023 69537916 ID=MS.gene041666.t1.exon4;Parent=MS.gene041666.t1
chr6.3 CDS 69537916 69538023 69537916 ID=cds.MS.gene041666.t1;Parent=MS.gene041666.t1
chr6.3 exon 69536921 69537199 69536921 ID=MS.gene041666.t1.exon5;Parent=MS.gene041666.t1
chr6.3 CDS 69536921 69537199 69536921 ID=cds.MS.gene041666.t1;Parent=MS.gene041666.t1
chr6.3 exon 69536813 69536833 69536813 ID=MS.gene041666.t1.exon6;Parent=MS.gene041666.t1
chr6.3 CDS 69536813 69536833 69536813 ID=cds.MS.gene041666.t1;Parent=MS.gene041666.t1
Gene Sequence

>MS.gene041666

ATGGAAAGATTGGGGAAGCCAGATATCGGTGATGCGAGGGCTTATATGAAAGAGCAGGTGGGTGAAGTTGGGAGAGCTTTTTACTTGGGGAAGTTGCACGGAAGATCTGAACAGAATAGCATCTGTGGATTAAATTTTCCTGTTGCATTGGAGAAGCAGAAGGAAGAGTATCCAAGGCTTCCTCCTGTGAAAATTAAGTCAGAAGATAAGCCGTTGACTATTAATTGGAGCGAGAAGTTTGAATCCGATGGATTGGCTGCTAAGCTGGCAAGTGCTGACAGCTCTTTACTTATTGGATCTTATCTGGATGTACCTATTGGACAAGAAATTAAAAATGCAGGTAAGCTTTTGTCCGTGATATTATTAAATTATTAAAATACATGCATATGCTTTCAAATGTTCTTGTAGCTGTTTCACCTTTGGGGGCTCAAATTACTGTCTGATTTGTTGCTTTGTCATGACAATAGTTTTGTGTACTCTCTGCAATTTCCCTCTTTCTGGGCTTAGGATCTTGATTTAGTGGTTTAAGAATCAATAATGCGTTATGTTTTTTATGGTCTTAACTCTACGGTTCTCACGAAAATCCCCCTTCCCTCCAATTACCTGGATTTTGGCTGGCGGTAAGTAAAACCTGGCCAAGGGTTGTTCCAGCCAAGATTCAAATTTGTGTTCTCCTGTACGATTCATCCTTAACTGGAGCCCATTAATCACTTGGTTAATAATGTGTTCCTTTGTACACTAGGAGTGTGTTTGCGAGTTGGATTTTGCAGGGTTGTGGAGGGGAAGACTTTAAAGGGTTAACTCTATATTTTAATATAATGAAAGAACAACATGATACATGAGCATATATTATCTTGTTCTTTAAATTTTTTTAAAGTACCAAAAACCAACTACCATGCACACCCTGGATGTTTTAAGGGATGCTTAATTCATTAGGCTTCTTTCTGGTATGCATGACAATTTGAAATACACATTCACTTTGATGCCAATTGGATTGAATTTTGACATTGCGAGATAAAATAGTATTCCACTTACTAGCCTTAGCACCTGAATCTCTTTCATCTTGTTGGCCTACTTCTTGTCAGTTTATTTTTAGTTTAGAATGGTGAAATTTACGTTGAGTAAAATGGCTATAATCATTTTGTAGACTTCACTAAAATGGGAGATTCGTCCTATTTACTTTGTAAATTTATCATGAATGCTAATGTGATTACTTTTCAATGATATTTTATATCTGAATAGATATTAGTTTTAGTTTCCTTAATGTCACATTATTTATTGAATCAAAATGATTTAAATATTAGTTAGTTCCCCTCTGTGCTAATCCCAGTGGACCATGACAATTAAGGTTACCAGTTAGGTAAATGCTTTTGTTTGGCCTGTTTCACCGATTAAGGTTTTCCCACATTAACTATTTTCAGCCATTTGTACATACCCAAAGATTATTTGTGATTGTTTTTTCTGATTGTGCATGCTTTGTTACAAAGACCACGACTTTGACCTATTTGTATATGTTTTAGGTATGAGGAAGGCTACAGGGGGCAGTTGGCTGTCCGTTAGTCAAGGAATATCAGAGGATACCTCTGATCTTGTATCAGGTTTTGCTACAGTTGGTGATGGGTTGAGTGAATCTGTCGATTATCCAAATGAATATTGGGACTCTGATGAATATGCAGACGACGACGATGTTGGGTACATGAGACAACCTATTGAGGATGAGGCCTGGTTTTTGGCGCATGAAATCGATTACCCTAGTGACAATGAAAAGGGGACCGGGCATGGAAGTGTTCCAGATCCTCAGGAAAGAGGTCCTGCCAGAGAGGAGGATGACGATCAATCTTTCGCTGAAGAGGATTCTTATTTCTCTGGAGAGCAATATCTTCAAGCAAAGAATGTTGAGCCGGTCATCGGGTCAGATGATCCCATCGGTATAACGGTTACTAATATGTATGGACGGGCTAATGGTAATGATTTAATGGCTCAATACGATGGAGAATTGATGGATGTAGAGGAACTGAATCTGATGCACGCGGAACCTGTCTGGCAGGGCTTTGTCCCTCAGACAAATGACCTAATCATGTTGGGAGATGGAAAAGTTCTGAATCATAGTGGAAGATCACGACTCGAGGAAATGGAAGATGATCAACACGGTTCAGTTAGGTCAATCGGGGTGGGTTTCAACAGTGATGCTGCCGATATCGGCAGTGAAGTGCATGGAAGTTTTATTGGTGGTAGCAGTGAAGGGGATTTAGAATATTTCCGTGATCGTGATAGTGGACTTGGGGGGTCTAAACACTCTCATCATGATTTCGGAAAGAATTCTATGGACAAATCATTTAAAAATAAGAAGAAAAATGATGAGATTGAGTCGAATAAATATGTCATTGGAGGTCATAAAGATGCACACTCACAAATAAAAACACATACTGAAGGCAACTTTTCATTTCCTCAGTCTCTTAAAGATAGCCAGATGATTCAGGGTGGTGGTTCCAGTAAGTTGCCATGGTTAAATAATTGTAATGCGGATGAAACTGATGACTGTATGAATGCTTTTGAGGGATCTGATGAAATGCTTTCTTCGTGGAGGCAGAAGAGTAGTGATTCTTCACCCGAGAAAAGTTCTAGGGATGAGAATAATGCTCATGCGGTTAGATCTTCGAACTCTTCTCCAACTACTGTTGATAATTATGGGTACGCTGATAAAGAGCATGTCAAGCTAGAAAAGGATGATGAAGAAGTTGACATTACAAGGGAAGATGATTTAGGTGTCTCACAAGAGGATGAAGAGATTGCTGCTGTGCAAGAGCAGGTAAGGCAAATAAAGGCTCAGGAGGAGGAATTTGAAACCTTCAATCTAAAGATTGTGCACAGGAAAAACAGGCACGTCTTCAATATATAAGCATGTGTACCATTTTCATTGATTTGCAAAGTTTTTGAGTTTTATTTAAATAAAAGTTAAGAAGAGATTTAGAACTAATAAGATATCAGCTTTGTTCATTCCTAGATTGTAATTTTAACTTGATATTGAGATTGTTGTCTTTTTTTTTTTTTTTTTTTTTTTTCTTTCTTTTCACTCGGAATTCTCTTCACATTTGAATTCACTATACATTAATTATTAATCGGTTCATTCATAACAGCGCATTGAGTTAATAATGGAAAATAAGATGAAACTAAGATGGTAGCAGAGTTTCTATATCCTTTTTGATCCGTAAAACATTCCTTGCTTTGTTAAAATACAGATCTGAAAATATTAATGATTTGTGATGAATAAAATTCATTATTTTTCATTAGAAATATCTTGTACTTGTGCCCTCGTGTAGTAGTCATGAAATCAGCACTGTCAAAATGACTGCATAAAGTAATAATTCGAGTAGTCCTGTGCTCTGGATGACACTTGACAATTGCTGTAAATTCCTGAAAATTTTCTATTCCTTAATTTTGCTCTTACAAGAAATTGAGAAGTTACCGTACGCGAGACTGTATAACATACATGTGTTGTCATGATAATTCGATCGAAAACATTGTTGAAATTGGGGAAATCATATGCTGCTGCTCACTAAGCTTTTCCGAATATTTATCTGTTTAACTTTATGCCATGTCAGAAGGCTCAATGAGCTCGTCTATGTAGATACTTTTGATATGTTGCACAATAGCTATTCTTGAAATTGTTCCATGGTGTTTCTCCTTTTGGCTTTGAAATGCTATCTAAAACTATGTTTTGTTGTTCAGAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCTGTAATAGCTGGCCGCTATCATGTCACCGAGTATCTGGGATCTGCTGCATTTAGTAAAGCCATACAAGCTCATGACCTGCACACAGGTGTGGATGTTTGTATTAAAATTATAAAGAACAACAAGGATTTCTTTGATCAAAGCCTTGATGAAATCAAACTTCTCAAGTATGTCAATAAGCATGATCCTGGAGACAAGTATCACATTTTGCGATTATATGATTATTTCTATTACAGAGTAAGTGATTTTCGATCTGCTACTCATCTTGTAACCACTTCTATATTAAGACTTGTCTGATGTGCACATGCAAAATAGTATTGCTTCATGCACAAGCTTATTTGCCACCATTGGATCAATAAATCTCACCATATTTCATTTAATTTAATATTGAGCCTTATTGATCCAATGGTAAAAACCACATTGTGCATGGTGCAAGACGTAAGTCCCTTGTGCACAATAGACTTGGCCCTATACTAATATGTGCTGCAACTGCAACAATACTACATTTGTAATTTTTGTGTTAATTTTAACCACAGCCACTTAATGTGTTTGTGACTGTCGCATTTTTTGATACATTCCAGAATTTGTTATAAAATATAACTATTCACACTTGTCATATTTCAGAAAGAACTGAATTACATTATAAGGACTATTCTTCAAAGCTATATTCAAAGTGGTTTGAGAAATACTATCAACTTAATCATCTGATTTTACCACTTTTCATTCGTTTCCATTGTTGCACTGCAGGAACATTTGTTAATAGTGTGTGAACTACTCAAAGCCAACTTATACGAGTTTCATAAATTTAACAGAGAATCAGGAGGGGAAGTTTACTTCACAATGCCAAGATTGCAGGTTTGTAGAGTTCTGCTCACATTCTGATGTTAGTTTTCATATTATCTACAACTAGCAAGCAATGGACATTGACATGGCAGTCTGTCCGCTTTTCTTCTCTATTAGAGACCATAGTTGGCCTCCACGAATGTTAAGCTTGAGGCTTTGGATGAAATTTTATTATTTAGTATTGTTATTTTCATTTTGGAGAGAGTGGGGCTTAGATGGTTTGGGCATGTAGAGAGAAGACCCGTAGATGCCGTCGTAAGAAGAGTAGATCAAATGGAGGAGAGTCAGGTCAGAGGAGGTAAAGGAAGACCTAGGAAAACTATAAGAGAAACCATTAGAAAGGATTTAGAGGTCAATGAGTTGGATTCAAATATGGTGTATCATAGAACACTATGGCGTAATTTGATCCATGTAGGCGACCCCACTTAGTGGGATAAGGCTTGGTTGTTGTTGTTGTTTTAATTACGATATTTTTAATTCAAGAGTCAGTTAAGGTCAGTGTAGATTTATTTTTAGATTGATTTGAGGATTTTATTAGATTTGATTTAAAATTAATTAAGGATTAAGATCAAATTTGAAGGATAAAATGTAAATAAAAGAGTTTAAATGAAGGGTAAAATTGGAAGAAAAAAGCTACAGGAAACTTTGGTATTCACTTCATATATATATAGGTATAGATAGATTCTACTATTGTCTCATTAGAATCCTGTCTTGATTTGTTATTGCAGTCAATTACCATTCAATGTTTGGAAGCACTTCAGTATTTACATAACCTTGGACTAATACATTGCGACTTGAAGCCGGAGAATATTTTGGTTAAAAGCTACAGCCGATGTGAGGTGAAGGTCATTGATCTTGGAAGTAGTTGTTTTGAGACAGATCATCTTTGCTCATATGTTCAGTCCAGATCCTATCGTGCTCCTGAGGTTATTCTCGGGCTTTCATATGACAAGAAGATTGATATCTGGTCCCTTGGATGCATCTTGGCAGAACTTTGTACCGGCAATGTAAGTATAATATATAGTCAATTCAATTTCAAAATGCCATAAAATTTTCAAACTTAAGCATGTTATTCACGTCTATTTTCGTGTTAGAGGTACATGAAAATGGTGTAG
Protein sequence

>MS.gene041666.t1

MERLGKPDIGDARAYMKEQVGEVGRAFYLGKLHGRSEQNSICGLNFPVALEKQKEEYPRLPPVKIKSEDKPLTINWSEKFESDGLAAKLASADSSLLIGSYLDVPIGQEIKNAGMRKATGGSWLSVSQGISEDTSDLVSGFATVGDGLSESVDYPNEYWDSDEYADDDDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTGHGSVPDPQERGPAREEDDDQSFAEEDSYFSGEQYLQAKNVEPVIGSDDPIGITVTNMYGRANGNDLMAQYDGELMDVEELNLMHAEPVWQGFVPQTNDLIMLGDGKVLNHSGRSRLEEMEDDQHGSVRSIGVGFNSDAADIGSEVHGSFIGGSSEGDLEYFRDRDSGLGGSKHSHHDFGKNSMDKSFKNKKKNDEIESNKYVIGGHKDAHSQIKTHTEGNFSFPQSLKDSQMIQGGGSSKLPWLNNCNADETDDCMNAFEGSDEMLSSWRQKSSDSSPEKSSRDENNAHAVRSSNSSPTTVDNYGYADKEHVKLEKDDEEVDITREDDLGVSQEDEEIAAVQEQYLGSAAFSKAIQAHDLHTGVDVCIKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQYLHNLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNRYMKMV