AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene041667

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041667.t1 MTR_5g082700 72.872 188 48 1 308 495 382 566 8.05e-92 292
MS.gene041667.t1 MTR_5g082700 72.872 188 48 1 308 495 382 566 4.35e-91 291
MS.gene041667.t1 MTR_5g082700 72.872 188 48 1 308 495 382 566 1.14e-90 291
MS.gene041667.t1 MTR_6g074905 90.667 150 14 0 112 261 510 659 1.94e-86 288
MS.gene041667.t1 MTR_6g074905 71.649 194 17 2 289 480 856 1013 1.06e-80 273
MS.gene041667.t1 MTR_8g069620 89.552 134 14 0 306 439 21 154 8.02e-83 255
MS.gene041667.t1 MTR_6g074870 76.331 169 4 1 312 480 112 244 5.87e-80 253
MS.gene041667.t1 MTR_6g074640 61.376 189 22 4 309 496 11 149 1.93e-62 204
MS.gene041667.t1 MTR_0349s0030 95.000 80 4 0 401 480 54 133 1.49e-43 155
MS.gene041667.t1 MTR_8g070930 42.308 156 83 3 328 480 138 289 5.34e-28 119
MS.gene041667.t1 MTR_1g111180 37.838 148 85 2 324 467 670 814 1.43e-23 105
MS.gene041667.t1 MTR_1g111180 37.838 148 85 2 324 467 671 815 1.46e-23 105
MS.gene041667.t1 MTR_6g074750 93.333 45 3 0 436 480 18 62 8.78e-22 90.9
MS.gene041667.t1 MTR_4g104620 31.013 158 104 3 312 469 81 233 4.01e-18 87.0
MS.gene041667.t1 MTR_3g076540 32.500 160 101 4 312 469 75 229 4.46e-18 86.7
MS.gene041667.t1 MTR_3g076540 32.500 160 101 4 312 469 75 229 5.77e-18 86.7
MS.gene041667.t1 MTR_3g109390 31.875 160 102 3 312 469 55 209 1.17e-17 84.3
MS.gene041667.t1 MTR_3g109390 31.875 160 102 3 312 469 55 209 1.40e-17 85.1
MS.gene041667.t1 MTR_3g109390 31.875 160 102 3 312 469 55 209 1.50e-17 85.1
MS.gene041667.t1 MTR_3g109390 31.875 160 102 3 312 469 33 187 1.84e-17 84.3
MS.gene041667.t1 MTR_3g086530 30.625 160 104 4 312 469 74 228 2.25e-17 83.2
MS.gene041667.t1 MTR_3g076540 32.886 149 95 3 321 469 4 147 2.26e-17 84.0
MS.gene041667.t1 MTR_3g086530 30.625 160 104 4 312 469 74 228 3.68e-17 83.6
MS.gene041667.t1 MTR_3g086530 30.625 160 104 4 312 469 74 228 5.98e-17 83.6
MS.gene041667.t1 MTR_4g104620 34.074 135 84 3 335 469 1 130 3.45e-16 80.1
MS.gene041667.t1 MTR_4g104620 34.074 135 84 3 335 469 10 139 3.79e-16 80.1
MS.gene041667.t1 MTR_3g076540 33.333 135 85 3 335 469 1 130 6.19e-16 79.3
MS.gene041667.t1 MTR_1g061690 32.609 184 104 6 295 469 13 185 3.51e-15 78.6
MS.gene041667.t1 MTR_3g109390 33.571 140 86 3 330 469 86 218 1.59e-14 75.9
MS.gene041667.t1 MTR_3g109390 33.571 140 86 3 330 469 64 196 1.64e-14 75.5
MS.gene041667.t1 MTR_4g056390 33.333 180 104 6 297 469 10 180 2.03e-14 76.3
MS.gene041667.t1 MTR_2g084555 31.183 186 112 5 291 469 5 181 3.05e-14 75.5
MS.gene041667.t1 MTR_5g024270 32.903 155 95 3 320 469 29 179 2.61e-13 72.0
MS.gene041667.t1 MTR_5g024270 31.792 173 102 5 304 469 16 179 3.81e-13 71.6
MS.gene041667.t1 MTR_3g086530 33.043 115 72 3 355 469 2 111 3.46e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041667.t1 AT3G17750 62.950 278 100 2 206 480 701 978 2.37e-106 342
MS.gene041667.t1 AT3G17750 52.414 145 66 2 112 254 469 612 1.05e-37 148
MS.gene041667.t1 AT1G73450 92.486 173 13 0 308 480 820 992 9.02e-106 341
MS.gene041667.t1 AT1G73450 51.701 147 67 3 116 260 468 612 5.95e-35 140
MS.gene041667.t1 AT1G73460 92.486 173 13 0 308 480 837 1009 1.22e-105 341
MS.gene041667.t1 AT1G73460 53.061 147 65 3 116 260 473 617 4.42e-34 137
MS.gene041667.t1 AT1G73460 92.486 173 13 0 308 480 837 1009 1.22e-105 341
MS.gene041667.t1 AT1G73460 53.061 147 65 3 116 260 473 617 4.42e-34 137
MS.gene041667.t1 AT2G40120 70.213 188 53 1 308 495 240 424 2.44e-87 279
MS.gene041667.t1 AT5G35980 40.645 155 86 3 328 480 121 271 6.38e-25 109
MS.gene041667.t1 AT5G35980 40.645 155 86 3 328 480 121 271 6.47e-25 109
MS.gene041667.t1 AT5G35980 40.645 155 86 3 328 480 86 236 8.14e-25 108
MS.gene041667.t1 AT3G25840 31.792 173 106 3 304 467 325 494 1.49e-20 95.5
MS.gene041667.t1 AT3G25840 35.135 148 89 2 324 467 612 756 1.67e-20 95.9
MS.gene041667.t1 AT4G32660 33.750 160 99 3 312 469 52 206 5.62e-20 91.7
MS.gene041667.t1 AT4G24740 32.500 160 101 4 312 469 79 233 1.02e-19 90.5
MS.gene041667.t1 AT4G32660 33.750 160 99 3 312 469 44 198 1.18e-19 91.3
MS.gene041667.t1 AT4G32660 33.750 160 99 3 312 469 52 206 1.19e-19 91.3
MS.gene041667.t1 AT1G13350 32.317 164 103 3 321 480 434 593 1.46e-19 92.8
MS.gene041667.t1 AT4G24740 32.500 160 101 4 312 469 79 233 1.46e-19 90.5
MS.gene041667.t1 AT1G13350 32.317 164 103 3 321 480 461 620 1.69e-19 92.4
MS.gene041667.t1 AT4G24740 32.500 160 101 4 312 469 41 195 2.15e-19 90.5
MS.gene041667.t1 AT1G13350 32.317 164 103 3 321 480 507 666 2.34e-19 92.0
MS.gene041667.t1 AT4G24740 32.500 160 101 4 312 469 79 233 2.59e-19 90.5
MS.gene041667.t1 AT3G53640 35.099 151 91 2 321 467 315 462 2.40e-18 88.6
MS.gene041667.t1 AT3G53570 31.548 168 108 5 312 479 98 258 6.51e-18 86.7
MS.gene041667.t1 AT3G53570 31.548 168 108 5 312 479 98 258 6.51e-18 86.7
MS.gene041667.t1 AT3G53570 31.548 168 108 5 312 479 98 258 6.51e-18 86.7
MS.gene041667.t1 AT3G53570 31.548 168 108 5 312 479 84 244 7.42e-18 86.3
MS.gene041667.t1 AT3G53570 31.548 168 108 5 312 479 84 244 7.42e-18 86.3
MS.gene041667.t1 AT4G24740 33.333 135 85 3 335 469 1 130 3.69e-17 81.6
MS.gene041667.t1 AT4G24740 33.333 135 85 3 335 469 1 130 1.04e-16 81.6
MS.gene041667.t1 AT4G24740 33.333 135 85 3 335 469 1 130 1.04e-16 81.6
MS.gene041667.t1 AT4G24740 33.333 135 85 3 335 469 1 130 1.04e-16 81.6
MS.gene041667.t1 AT2G17530 35.625 160 92 4 317 469 24 179 1.10e-15 79.0
MS.gene041667.t1 AT2G17530 35.625 160 92 4 317 469 24 179 2.67e-15 78.6
MS.gene041667.t1 AT2G17530 35.625 160 92 4 317 469 24 179 2.67e-15 78.6
MS.gene041667.t1 AT3G53030 31.875 160 98 4 317 469 28 183 1.46e-14 76.6
MS.gene041667.t1 AT3G44850 33.108 148 90 3 327 469 43 186 6.07e-14 74.7
MS.gene041667.t1 AT5G22840 30.769 182 110 5 295 469 14 186 2.10e-13 72.8
MS.gene041667.t1 AT4G32660 38.144 97 55 2 373 469 3 94 3.30e-11 64.7

Find 120 sgRNAs with CRISPR-Local

Find 265 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACACTCCCATCATGATTT+TGG 0.169060 6.3:-69638004 MS.gene041667:CDS
TTACCTCCTTCCAGATTATT+TGG 0.176652 6.3:-69639420 MS.gene041667:CDS
AAAATATTACTAGTCTTTCT+TGG 0.240097 6.3:+69639163 None:intergenic
CTTGAAGCCGGAGAATATTT+TGG 0.240496 6.3:-69636230 MS.gene041667:CDS
ATGTTTAACCTTGCACAATT+AGG 0.250746 6.3:-69639565 MS.gene041667:CDS
GTCTAATGGTAATGATTTAA+TGG 0.266904 6.3:-69638307 MS.gene041667:CDS
CTATCATGTCACCGAGTATC+TGG 0.271868 6.3:-69637532 MS.gene041667:CDS
GTCAATTACCATTCAATGTT+TGG 0.292705 6.3:-69636296 MS.gene041667:CDS
CATAAATTCATCAGAGAATC+AGG 0.294778 6.3:-69636813 MS.gene041667:CDS
AGAAGAAGTGGAAGCGTAAT+TGG 0.300069 6.3:-69639364 MS.gene041667:intron
TTGATCATCATCCTCCTCTT+TGG 0.332866 6.3:+69638449 None:intergenic
CGTGATCGTGATAGTGGCCT+TGG 0.337751 6.3:-69638034 MS.gene041667:CDS
CACGGTTCAGTTAGGTCAAT+CGG 0.353249 6.3:-69638117 MS.gene041667:CDS
CTTCACAATGCCAAGGTTGC+AGG 0.354539 6.3:-69636778 MS.gene041667:intron
AAGAATGTTGAGCCAGTCAT+AGG 0.375867 6.3:-69638375 MS.gene041667:CDS
CCATCAGATTCCAAATAATC+TGG 0.383371 6.3:+69639410 None:intergenic
GCAGAGGATTCTTATTTCTC+TGG 0.386983 6.3:-69638417 MS.gene041667:CDS
TTCCATCTCCCAACATGATC+AGG 0.400162 6.3:+69638193 None:intergenic
TGATGCATGCGGAACTTGTC+TGG 0.403780 6.3:-69638242 MS.gene041667:CDS
AATATGTATGGAAGGTCTAA+TGG 0.408395 6.3:-69638321 MS.gene041667:CDS
GGACCTCTTTCCTGAGGATC+TGG 0.410492 6.3:+69638474 None:intergenic
GTGATCGTGATAGTGGCCTT+GGG 0.436456 6.3:-69638033 MS.gene041667:CDS
AAGATCAAGACTAAAGGAAA+TGG 0.439899 6.3:-69638151 MS.gene041667:CDS
TTTATGAAACTCGTATAAGT+TGG 0.441775 6.3:+69636830 None:intergenic
CTTCAGTATTTACATAACCT+TGG 0.444556 6.3:-69636268 MS.gene041667:CDS
ACTCCACAAACCTGCAACCT+TGG 0.445960 6.3:+69636768 None:intergenic
GACTTTGTCCCTCAGACAAA+TGG 0.455050 6.3:-69638216 MS.gene041667:CDS
TCATCATCCTCCTCTTTGGC+AGG 0.455695 6.3:+69638453 None:intergenic
TATTTCCGTGATCGTGATAG+TGG 0.459535 6.3:-69638040 MS.gene041667:CDS
CCAGATTATTTGGAATCTGA+TGG 0.462445 6.3:-69639410 MS.gene041667:CDS
ACGGTTCAGTTAGGTCAATC+GGG 0.463137 6.3:-69638116 MS.gene041667:CDS
ATGATCAACACGGTTCAGTT+AGG 0.463977 6.3:-69638125 MS.gene041667:CDS
AGATAGGTTGGAAGTGAAGC+TGG 0.471506 6.3:+69639489 None:intergenic
TTAGGTATGAGGAAGGCTAC+AGG 0.471617 6.3:-69638705 MS.gene041667:intron
CAATGACCTTCACCTCATAT+CGG 0.474964 6.3:+69636194 None:intergenic
ATAACGGTTACTAATATGTA+TGG 0.478857 6.3:-69638333 MS.gene041667:CDS
TAGTCGAATAAATATGTCAT+TGG 0.480705 6.3:-69637929 MS.gene041667:CDS
GTTGAGCCAGTCATAGGGTT+AGG 0.487892 6.3:-69638369 MS.gene041667:CDS
GCAGAGCCTTACAAAATTGA+CGG 0.494590 6.3:-69639187 MS.gene041667:intron
ACAAATGGCCTGATCATGTT+GGG 0.495104 6.3:-69638201 MS.gene041667:CDS
AAGTGCTTCCAAACATTGAA+TGG 0.497818 6.3:+69636288 None:intergenic
TCAGTTAGGTCAATCGGGGT+GGG 0.498477 6.3:-69638111 MS.gene041667:CDS
GTCATTGATGACAGATAGGT+TGG 0.500301 6.3:+69639477 None:intergenic
ACGGGTCAGATGTTCAGAAC+TGG 0.501005 6.3:-69637609 MS.gene041667:intron
TATGTCAATAAGCATGATCC+TGG 0.504155 6.3:-69637381 MS.gene041667:CDS
GCATGCGGAACTTGTCTGGC+AGG 0.506523 6.3:-69638238 MS.gene041667:CDS
AATTCTTTCCAAAATCATGA+TGG 0.507731 6.3:+69637996 None:intergenic
TTAGTAACCGTTATACCGAT+TGG 0.508294 6.3:+69638342 None:intergenic
TTCAGTTAGGTCAATCGGGG+TGG 0.510316 6.3:-69638112 MS.gene041667:CDS
ATAAGAGAAGGAAGAAGAAG+TGG 0.511841 6.3:-69639376 MS.gene041667:CDS
TGGAAGCGTTCCAGATCCTC+AGG 0.518189 6.3:-69638484 MS.gene041667:CDS
TAAAAGCTACAGCCGATATG+AGG 0.518874 6.3:-69636206 MS.gene041667:CDS
AGTCGTCATTGATGACAGAT+AGG 0.521310 6.3:+69639473 None:intergenic
TCGATACGATGGAGAATTGA+TGG 0.526615 6.3:-69638283 MS.gene041667:CDS
TCGAATAAATATGTCATTGG+AGG 0.529324 6.3:-69637926 MS.gene041667:intron
TGAGCAGTTTGATCTCATCA+AGG 0.529484 6.3:+69637406 None:intergenic
GACAAATGGCCTGATCATGT+TGG 0.536415 6.3:-69638202 MS.gene041667:CDS
GAAGGAGGTAAGAACTTCTC+CGG 0.538556 6.3:+69639432 None:intergenic
ATTCTTTCCAAAATCATGAT+GGG 0.539760 6.3:+69637997 None:intergenic
TAGTGGAAGATCAAGACTAA+AGG 0.544080 6.3:-69638157 MS.gene041667:CDS
GAAGCTGGAGTTACCGTGGT+AGG 0.545359 6.3:+69639504 None:intergenic
AGGTGATCCAATCGGTATAA+CGG 0.545961 6.3:-69638349 MS.gene041667:CDS
TTGGCAGGACCTCTTTCCTG+AGG 0.546000 6.3:+69638468 None:intergenic
AAACATCCACGCCTGTGTGC+AGG 0.551422 6.3:+69637472 None:intergenic
AAAATGTGATACTTGTCTCC+AGG 0.552373 6.3:+69637363 None:intergenic
GGAAAAGTTCTGAATCATAG+TGG 0.553356 6.3:-69638174 MS.gene041667:CDS
GGCCTGATCATGTTGGGAGA+TGG 0.555314 6.3:-69638195 MS.gene041667:CDS
TCATCAATGACGACTTGCAT+TGG 0.557725 6.3:-69639465 MS.gene041667:CDS
TATCATGTCACCGAGTATCT+GGG 0.558059 6.3:-69637531 MS.gene041667:CDS
GGATCACCTAACCCTATGAC+TGG 0.562423 6.3:+69638363 None:intergenic
AACAGTGATGCTGCTGACAT+CGG 0.562518 6.3:-69638084 MS.gene041667:CDS
AAGCTGGAGTTACCGTGGTA+GGG 0.563246 6.3:+69639505 None:intergenic
TAGGTATGAGGAAGGCTACA+GGG 0.571899 6.3:-69638704 MS.gene041667:CDS
TGCAGCAGATCCCAGATACT+CGG 0.574398 6.3:+69637521 None:intergenic
GAGGATTCTTATTTCTCTGG+AGG 0.574579 6.3:-69638414 MS.gene041667:CDS
GATTTAATGGCTCGATACGA+TGG 0.576258 6.3:-69638294 MS.gene041667:CDS
GTTCAGAACTGGCTTTGAAG+AGG 0.579862 6.3:-69637598 MS.gene041667:CDS
GAGACAGAACGTATAAGAGA+AGG 0.581785 6.3:-69639388 MS.gene041667:CDS
AGTCACAATGTATTAGTCCA+AGG 0.583347 6.3:+69636251 None:intergenic
AATACATTGTGACTTGAAGC+CGG 0.584972 6.3:-69636242 MS.gene041667:CDS
TTTGATTTGTCGGAGGATGG+TGG 0.585090 6.3:+69639540 None:intergenic
CAGATTCCAAATAATCTGGA+AGG 0.585559 6.3:+69639414 None:intergenic
GTTCCAGATCCTCAGGAAAG+AGG 0.586649 6.3:-69638477 MS.gene041667:CDS
GGAAAGAGGTCCTGCCAAAG+AGG 0.586977 6.3:-69638463 MS.gene041667:CDS
TGATCGTGATAGTGGCCTTG+GGG 0.589977 6.3:-69638032 MS.gene041667:CDS
ATGATCAGGCCATTTGTCTG+AGG 0.591330 6.3:+69638207 None:intergenic
CGGTTACTAATATGTATGGA+AGG 0.596368 6.3:-69638329 MS.gene041667:CDS
GATCTGGAACGCTTCCATGC+CGG 0.597977 6.3:+69638490 None:intergenic
AGTGACAATGAAAAGGGGAC+CGG 0.598576 6.3:-69638509 MS.gene041667:intron
AGGATTCTTATTTCTCTGGA+GGG 0.600788 6.3:-69638413 MS.gene041667:CDS
CAATGAAAAGGGGACCGGCA+TGG 0.603773 6.3:-69638504 MS.gene041667:intron
TTAGACCTAATGTATTAGAG+TGG 0.606216 6.3:+69636051 None:intergenic
TGATCAATATTTCGCTGCAG+AGG 0.608502 6.3:-69638433 MS.gene041667:CDS
GATCGTGATAGTGGCCTTGG+GGG 0.612495 6.3:-69638031 MS.gene041667:CDS
TGGAGAATTGATGGATGTAG+AGG 0.612656 6.3:-69638274 MS.gene041667:CDS
TTGCATTGGTACTCAACCGC+CGG 0.613322 6.3:-69639451 MS.gene041667:CDS
TGATCAGGCCATTTGTCTGA+GGG 0.614481 6.3:+69638208 None:intergenic
AAGAGGTCCTGCCAAAGAGG+AGG 0.616143 6.3:-69638460 MS.gene041667:CDS
AGGTATGAGGAAGGCTACAG+GGG 0.617750 6.3:-69638703 MS.gene041667:CDS
AGAATGTTGAGCCAGTCATA+GGG 0.619199 6.3:-69638374 MS.gene041667:CDS
ATAGGGTTAGGTGATCCAAT+CGG 0.623734 6.3:-69638357 MS.gene041667:CDS
ATTCCAAATAATCTGGAAGG+AGG 0.633617 6.3:+69639417 None:intergenic
CTACAGCCGATATGAGGTGA+AGG 0.633854 6.3:-69636200 MS.gene041667:CDS
AATTCATCAGAGAATCAGGA+GGG 0.635841 6.3:-69636809 MS.gene041667:CDS
TGGTGGCGCCTAATTGTGCA+AGG 0.641948 6.3:+69639557 None:intergenic
CAAGGCCACTATCACGATCA+CGG 0.649228 6.3:+69638035 None:intergenic
AAGTGTACTTCACAATGCCA+AGG 0.649789 6.3:-69636785 MS.gene041667:CDS
GGAACTGAATCTGATGCATG+CGG 0.654165 6.3:-69638253 MS.gene041667:CDS
TTACAGAATTTAAAACAACA+TGG 0.659407 6.3:+69637565 None:intergenic
TCATGACCTGCACACAGGCG+TGG 0.662259 6.3:-69637478 MS.gene041667:CDS
AAATTCATCAGAGAATCAGG+AGG 0.674713 6.3:-69636810 MS.gene041667:CDS
GACATCGGCAGTGAAGTGCA+TGG 0.679679 6.3:-69638069 MS.gene041667:CDS
ATTCATCAGAGAATCAGGAG+GGG 0.681132 6.3:-69636808 MS.gene041667:CDS
CGGTTCAGTTAGGTCAATCG+GGG 0.686082 6.3:-69638115 MS.gene041667:CDS
CAAGCTCATGACCTGCACAC+AGG 0.696036 6.3:-69637483 MS.gene041667:CDS
ATATTCACTCTTCCCTACCA+CGG 0.698166 6.3:-69639517 MS.gene041667:CDS
GGTATGAGGAAGGCTACAGG+GGG 0.710161 6.3:-69638702 MS.gene041667:CDS
AAGTGAAGCTGGAGTTACCG+TGG 0.714262 6.3:+69639500 None:intergenic
GGAGGTAAGAACTTCTCCGG+CGG 0.721555 6.3:+69639435 None:intergenic
GAAATGGAAGATGATCAACA+CGG 0.798575 6.3:-69638135 MS.gene041667:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAATTCAAAATTGAATTA+AGG - chr6.3:69639054-69639073 MS.gene041667:intron 10.0%
!! CTTAAGTTTGAAAATATTTA+TGG + chr6.3:69639490-69639509 None:intergenic 15.0%
!! TAAGTGATGATTAATTTATT+AGG - chr6.3:69636520-69636539 MS.gene041667:intron 15.0%
!! TCTTTAATATAACTGAATAA+AGG - chr6.3:69638473-69638492 MS.gene041667:CDS 15.0%
!!! TAAAATATAATTTTTCACAC+TGG - chr6.3:69638593-69638612 MS.gene041667:intron 15.0%
!!! TGATTTTTTAGATTGATTTA+AGG - chr6.3:69639089-69639108 MS.gene041667:intron 15.0%
!!! TTATATTTTATAACAAATCC+TGG + chr6.3:69638583-69638602 None:intergenic 15.0%
!! AAAAAATCACAAGTAATCTT+TGG + chr6.3:69636834-69636853 None:intergenic 20.0%
!! AATTAATGTTAAAATTGCCT+AGG + chr6.3:69638395-69638414 None:intergenic 20.0%
!! ATTCAAAATTGAATTAAGGT+TGG - chr6.3:69639058-69639077 MS.gene041667:intron 20.0%
!! TACCTAAAACATATACAAAA+AGG + chr6.3:69636899-69636918 None:intergenic 20.0%
!! TAGATTAGATCAAATTTGAA+GGG - chr6.3:69639147-69639166 MS.gene041667:CDS 20.0%
!! TCAGTAATAAAAAACTCAAA+TGG - chr6.3:69636492-69636511 MS.gene041667:intron 20.0%
!! TGATTATCCAAATGAATATT+GGG - chr6.3:69636993-69637012 MS.gene041667:intron 20.0%
!! TTAGATTAGATCAAATTTGA+AGG - chr6.3:69639146-69639165 MS.gene041667:CDS 20.0%
!! TTAGTATTCTCTTTATATAC+AGG - chr6.3:69639234-69639253 MS.gene041667:intron 20.0%
!! TTGATTATCCAAATGAATAT+TGG - chr6.3:69636992-69637011 MS.gene041667:intron 20.0%
!!! AAAATATTACTAGTCTTTCT+TGG + chr6.3:69636457-69636476 None:intergenic 20.0%
!!! AAAGACTAGTAATATTTTGA+TGG - chr6.3:69636459-69636478 MS.gene041667:intron 20.0%
!!! ATTTGAGTTTTTTATTACTG+AGG + chr6.3:69636493-69636512 None:intergenic 20.0%
!!! TTACAGAATTTAAAACAACA+TGG + chr6.3:69638055-69638074 None:intergenic 20.0%
! AAAATTAGGCATTACCTAAT+TGG + chr6.3:69636777-69636796 None:intergenic 25.0%
! AAGAATTGAATTACATTACG+AGG - chr6.3:69638630-69638649 MS.gene041667:intron 25.0%
! AATTCTTTCCAAAATCATGA+TGG + chr6.3:69637624-69637643 None:intergenic 25.0%
! AGACAAGTTTATAATGTTTG+TGG + chr6.3:69639286-69639305 None:intergenic 25.0%
! AGTTTGTCTTAAGTTTAGAA+TGG - chr6.3:69636626-69636645 MS.gene041667:intron 25.0%
! ATAACGGTTACTAATATGTA+TGG - chr6.3:69637284-69637303 MS.gene041667:intron 25.0%
! ATTCTTTCCAAAATCATGAT+GGG + chr6.3:69637623-69637642 None:intergenic 25.0%
! CAAATAAAAACACATACTGA+TGG - chr6.3:69637733-69637752 MS.gene041667:intron 25.0%
! GCATTACAATTATTTAACCA+CGG + chr6.3:69637826-69637845 None:intergenic 25.0%
! GTGGTTAAATAATTGTAATG+CGG - chr6.3:69637825-69637844 MS.gene041667:intron 25.0%
! TAAATTCAAGGTTACCAATT+AGG - chr6.3:69636760-69636779 MS.gene041667:intron 25.0%
! TAGTCGAATAAATATGTCAT+TGG - chr6.3:69637688-69637707 MS.gene041667:intron 25.0%
! TGGCTATATGTGAATAATAT+TGG - chr6.3:69636654-69636673 MS.gene041667:intron 25.0%
! TTTATGAAACTCGTATAAGT+TGG + chr6.3:69638790-69638809 None:intergenic 25.0%
! TTTCAAACTTAAGCATGTTA+AGG - chr6.3:69639497-69639516 MS.gene041667:CDS 25.0%
!! AAATGACTGAGATTAGTTAA+TGG + chr6.3:69636803-69636822 None:intergenic 25.0%
!! AATGACTGAGATTAGTTAAT+GGG + chr6.3:69636802-69636821 None:intergenic 25.0%
!! AGAAATTAAGTTTGAAGCTT+TGG - chr6.3:69638983-69639002 MS.gene041667:intron 25.0%
!! CTTTTAACCAAAATATTCTC+CGG + chr6.3:69639397-69639416 None:intergenic 25.0%
!! GAAGAAAATAATTTGTGACA+GGG + chr6.3:69636336-69636355 None:intergenic 25.0%
!! GACCTTTTTGTATATGTTTT+AGG - chr6.3:69636894-69636913 MS.gene041667:intron 25.0%
!! GTCTAATGGTAATGATTTAA+TGG - chr6.3:69637310-69637329 MS.gene041667:intron 25.0%
!! GTTTGTCTTAAGTTTAGAAT+GGG - chr6.3:69636627-69636646 MS.gene041667:intron 25.0%
!! TGAAGAAAATAATTTGTGAC+AGG + chr6.3:69636337-69636356 None:intergenic 25.0%
!! TTAAGTTTAGAATGGGTATA+TGG - chr6.3:69636634-69636653 MS.gene041667:intron 25.0%
!!! GAGTGAATATTTTGATTTGT+CGG + chr6.3:69636090-69636109 None:intergenic 25.0%
!!! GTTTTAAATTCTGTAATAGC+TGG - chr6.3:69638059-69638078 MS.gene041667:CDS 25.0%
!!! TCTTCAAATCAAGACTTTTT+TGG - chr6.3:69636351-69636370 MS.gene041667:intron 25.0%
!!! TGATTTTGGAAAGAATTCTA+TGG - chr6.3:69637627-69637646 MS.gene041667:intron 25.0%
!!! TTGTATATGTTTTAGGTATG+AGG - chr6.3:69636901-69636920 MS.gene041667:intron 25.0%
AAGATCAAGACTAAAGGAAA+TGG - chr6.3:69637466-69637485 MS.gene041667:CDS 30.0%
AATATGTATGGAAGGTCTAA+TGG - chr6.3:69637296-69637315 MS.gene041667:intron 30.0%
AATGTTAAAATTGCCTAGGA+AGG + chr6.3:69638391-69638410 None:intergenic 30.0%
ACACAGAAGAGTTTAAATGA+AGG - chr6.3:69639179-69639198 MS.gene041667:CDS 30.0%
AGCTTCAAACTTAATTTCTG+TGG + chr6.3:69638982-69639001 None:intergenic 30.0%
ATGAAATGCTTTCTTTATGG+AGG - chr6.3:69637885-69637904 MS.gene041667:intron 30.0%
ATGTAGAAACTCAATCCAAT+TGG + chr6.3:69636604-69636623 None:intergenic 30.0%
ATGTTTAACCTTGCACAATT+AGG - chr6.3:69636052-69636071 MS.gene041667:CDS 30.0%
CACAGAAGAGTTTAAATGAA+GGG - chr6.3:69639180-69639199 MS.gene041667:CDS 30.0%
CATAAATTCATCAGAGAATC+AGG - chr6.3:69638804-69638823 MS.gene041667:intron 30.0%
CTGATGAAATGCTTTCTTTA+TGG - chr6.3:69637882-69637901 MS.gene041667:intron 30.0%
CTTCAGTATTTACATAACCT+TGG - chr6.3:69639349-69639368 MS.gene041667:intron 30.0%
GGATAATCAACAAATTCACT+CGG + chr6.3:69636982-69637001 None:intergenic 30.0%
GTCAATTACCATTCAATGTT+TGG - chr6.3:69639321-69639340 MS.gene041667:intron 30.0%
GTTTAAATGAAGGGTGAAAT+TGG - chr6.3:69639189-69639208 MS.gene041667:intron 30.0%
TATATACAACTAGCATGCAA+TGG - chr6.3:69638903-69638922 MS.gene041667:intron 30.0%
TCATTCTCTTTGATACCAAT+TGG - chr6.3:69636586-69636605 MS.gene041667:intron 30.0%
TCGAATAAATATGTCATTGG+AGG - chr6.3:69637691-69637710 MS.gene041667:intron 30.0%
TTAGACCTAATGTATTAGAG+TGG + chr6.3:69639569-69639588 None:intergenic 30.0%
TTAGTTAATGGGGGAAAATT+AGG + chr6.3:69636791-69636810 None:intergenic 30.0%
TTCAAACTTAATTTCTGTGG+AGG + chr6.3:69638979-69638998 None:intergenic 30.0%
! ATGACTGAGATTAGTTAATG+GGG + chr6.3:69636801-69636820 None:intergenic 30.0%
! ATTGGTAACCTTGAATTTAG+TGG + chr6.3:69636759-69636778 None:intergenic 30.0%
! CAATAAAGAGTGTGACATTA+AGG + chr6.3:69636683-69636702 None:intergenic 30.0%
! GAGACAAGTATCACATTTTA+CGG - chr6.3:69638258-69638277 MS.gene041667:CDS 30.0%
! GTTTTCCACTCTAATACATT+AGG - chr6.3:69639561-69639580 MS.gene041667:CDS 30.0%
!! ATATGTTTTAGGTATGAGGA+AGG - chr6.3:69636905-69636924 MS.gene041667:intron 30.0%
!! GGTATTTTTCAATACATTCC+AGG - chr6.3:69638562-69638581 MS.gene041667:intron 30.0%
!!! TGAATATTTTGATTTGTCGG+AGG + chr6.3:69636087-69636106 None:intergenic 30.0%
!!! TTTTTATTACTGAGGTATCG+AGG + chr6.3:69636485-69636504 None:intergenic 30.0%
AAAATGTGATACTTGTCTCC+AGG + chr6.3:69638257-69638276 None:intergenic 35.0%
AAAGATAGCCAGATGATTCA+GGG - chr6.3:69637781-69637800 MS.gene041667:intron 35.0%
AAATTCATCAGAGAATCAGG+AGG - chr6.3:69638807-69638826 MS.gene041667:intron 35.0%
AAGTGCTTCCAAACATTGAA+TGG + chr6.3:69639332-69639351 None:intergenic 35.0%
AATACATTGTGACTTGAAGC+CGG - chr6.3:69639375-69639394 MS.gene041667:CDS 35.0%
AATTCATCAGAGAATCAGGA+GGG - chr6.3:69638808-69638827 MS.gene041667:intron 35.0%
AATTGTAATGCGGATGAAAC+CGG - chr6.3:69637835-69637854 MS.gene041667:intron 35.0%
AATTTCGTAAGCCAAAAACC+AGG + chr6.3:69637079-69637098 None:intergenic 35.0%
ACTTAATGTGTTTGTGGCTA+TGG - chr6.3:69638541-69638560 MS.gene041667:intron 35.0%
AGTCACAATGTATTAGTCCA+AGG + chr6.3:69639369-69639388 None:intergenic 35.0%
ATAAGAGAAGGAAGAAGAAG+TGG - chr6.3:69636241-69636260 MS.gene041667:CDS 35.0%
ATACAAAAAGGTCAAACCCA+TGG + chr6.3:69636887-69636906 None:intergenic 35.0%
ATAGCCACAAACACATTAAG+TGG + chr6.3:69638542-69638561 None:intergenic 35.0%
ATAGCCACTTAATGTGTTTG+TGG - chr6.3:69638535-69638554 MS.gene041667:intron 35.0%
ATTCCAAATAATCTGGAAGG+AGG + chr6.3:69636203-69636222 None:intergenic 35.0%
CAACTACTGTCGATAATTAC+GGG - chr6.3:69637990-69638009 MS.gene041667:CDS 35.0%
CAGATTCCAAATAATCTGGA+AGG + chr6.3:69636206-69636225 None:intergenic 35.0%
CCAACTACTGTCGATAATTA+CGG - chr6.3:69637989-69638008 MS.gene041667:CDS 35.0%
CCATCAGATTCCAAATAATC+TGG + chr6.3:69636210-69636229 None:intergenic 35.0%
CGGTTACTAATATGTATGGA+AGG - chr6.3:69637288-69637307 MS.gene041667:intron 35.0%
GAAATGGAAGATGATCAACA+CGG - chr6.3:69637482-69637501 MS.gene041667:CDS 35.0%
TAAAGATAGCCAGATGATTC+AGG - chr6.3:69637780-69637799 MS.gene041667:intron 35.0%
TAATCAACAAATTCACTCGG+AGG + chr6.3:69636979-69636998 None:intergenic 35.0%
TACCCTAGTGACAATGAAAA+GGG - chr6.3:69637102-69637121 MS.gene041667:intron 35.0%
TAGTGGAAGATCAAGACTAA+AGG - chr6.3:69637460-69637479 MS.gene041667:CDS 35.0%
TATAATGTTTGTGGTGTGAC+CGG + chr6.3:69639277-69639296 None:intergenic 35.0%
TATGTCAATAAGCATGATCC+TGG - chr6.3:69638236-69638255 MS.gene041667:CDS 35.0%
TCAGAGTCCCAATATTCATT+TGG + chr6.3:69637003-69637022 None:intergenic 35.0%
TCATGTCAAATTCGTGTTGA+AGG - chr6.3:69639521-69639540 MS.gene041667:CDS 35.0%
TCTTTGTAACAAAGCATGCA+TGG + chr6.3:69636864-69636883 None:intergenic 35.0%
TGTTAGTCAAGGAATATCAG+AGG - chr6.3:69636950-69636969 MS.gene041667:intron 35.0%
TTACCCTAGTGACAATGAAA+AGG - chr6.3:69637101-69637120 MS.gene041667:intron 35.0%
TTACCTCCTTCCAGATTATT+TGG - chr6.3:69636197-69636216 MS.gene041667:CDS 35.0%
TTAGTAACCGTTATACCGAT+TGG + chr6.3:69637278-69637297 None:intergenic 35.0%
! AAACACTCCCATCATGATTT+TGG - chr6.3:69637613-69637632 MS.gene041667:intron 35.0%
! AGGATTCTTATTTCTCTGGA+GGG - chr6.3:69637204-69637223 MS.gene041667:intron 35.0%
! ATAATTTGTGACAGGGAAGA+CGG + chr6.3:69636329-69636348 None:intergenic 35.0%
! ATGCTTTGTTACAAAGACCA+TGG - chr6.3:69636867-69636886 MS.gene041667:CDS 35.0%
! CCAGATTATTTGGAATCTGA+TGG - chr6.3:69636207-69636226 MS.gene041667:CDS 35.0%
! TGACTGAGATTAGTTAATGG+GGG + chr6.3:69636800-69636819 None:intergenic 35.0%
! TGCTTTGTTACAAAGACCAT+GGG - chr6.3:69636868-69636887 MS.gene041667:intron 35.0%
! TGGCTATCTTTAAGAGATTG+AGG + chr6.3:69637772-69637791 None:intergenic 35.0%
!! GGAAAAGTTCTGAATCATAG+TGG - chr6.3:69637443-69637462 MS.gene041667:CDS 35.0%
!! TATCCGCTTTTCTCTAATAG+AGG - chr6.3:69638943-69638962 MS.gene041667:intron 35.0%
!!! TATTTTGATTTGTCGGAGGA+TGG + chr6.3:69636083-69636102 None:intergenic 35.0%
AAGAATGTTGAGCCAGTCAT+AGG - chr6.3:69637242-69637261 MS.gene041667:intron 40.0%
AAGTGTACTTCACAATGCCA+AGG - chr6.3:69638832-69638851 MS.gene041667:intron 40.0%
ACAAATGGCCTGATCATGTT+GGG - chr6.3:69637416-69637435 MS.gene041667:CDS 40.0%
ACCCTAGTGACAATGAAAAG+GGG - chr6.3:69637103-69637122 MS.gene041667:intron 40.0%
AGAATGTTGAGCCAGTCATA+GGG - chr6.3:69637243-69637262 MS.gene041667:intron 40.0%
AGGTGATCCAATCGGTATAA+CGG - chr6.3:69637268-69637287 MS.gene041667:intron 40.0%
ATAGGGTTAGGTGATCCAAT+CGG - chr6.3:69637260-69637279 MS.gene041667:intron 40.0%
ATATTCACTCTTCCCTACCA+CGG - chr6.3:69636100-69636119 MS.gene041667:intron 40.0%
ATGATCAACACGGTTCAGTT+AGG - chr6.3:69637492-69637511 MS.gene041667:CDS 40.0%
ATTCATCAGAGAATCAGGAG+GGG - chr6.3:69638809-69638828 MS.gene041667:intron 40.0%
CAATGACCTTCACCTCATAT+CGG + chr6.3:69639426-69639445 None:intergenic 40.0%
CATTAGATACTGTCCTTCCT+AGG - chr6.3:69638375-69638394 MS.gene041667:CDS 40.0%
CCAATGGACCACTAAATTCA+AGG - chr6.3:69636748-69636767 MS.gene041667:intron 40.0%
CCGTAATTATCGACAGTAGT+TGG + chr6.3:69637992-69638011 None:intergenic 40.0%
CCTTGAATTTAGTGGTCCAT+TGG + chr6.3:69636751-69636770 None:intergenic 40.0%
CTGAATAAAGGTTGTTGCTG+TGG - chr6.3:69638485-69638504 MS.gene041667:CDS 40.0%
GAGACAGAACGTATAAGAGA+AGG - chr6.3:69636229-69636248 MS.gene041667:CDS 40.0%
GATTTAATGGCTCGATACGA+TGG - chr6.3:69637323-69637342 MS.gene041667:intron 40.0%
GCAGAGCCTTACAAAATTGA+CGG - chr6.3:69636430-69636449 MS.gene041667:intron 40.0%
GGATGAGAATAATGCTCATG+CGG - chr6.3:69637946-69637965 MS.gene041667:CDS 40.0%
GGTATAGATAGATTCCACTC+CGG - chr6.3:69639255-69639274 MS.gene041667:intron 40.0%
GTACATCAGACAACCTATTG+AGG - chr6.3:69637047-69637066 MS.gene041667:intron 40.0%
TAAAAGCTACAGCCGATATG+AGG - chr6.3:69639411-69639430 MS.gene041667:CDS 40.0%
TATCATGTCACCGAGTATCT+GGG - chr6.3:69638086-69638105 MS.gene041667:CDS 40.0%
TATTTCCGTGATCGTGATAG+TGG - chr6.3:69637577-69637596 MS.gene041667:CDS 40.0%
TCATCAATGACGACTTGCAT+TGG - chr6.3:69636152-69636171 MS.gene041667:intron 40.0%
TCGATACGATGGAGAATTGA+TGG - chr6.3:69637334-69637353 MS.gene041667:intron 40.0%
TCTCTAATAGAGGCCATAGT+TGG - chr6.3:69638953-69638972 MS.gene041667:intron 40.0%
TGAGCAGTTTGATCTCATCA+AGG + chr6.3:69638214-69638233 None:intergenic 40.0%
TGAGTGCAAATCAAACGTGA+TGG + chr6.3:69636392-69636411 None:intergenic 40.0%
TGATCAATATTTCGCTGCAG+AGG - chr6.3:69637184-69637203 MS.gene041667:intron 40.0%
TGGCCTCTATTAGAGAAAAG+CGG + chr6.3:69638949-69638968 None:intergenic 40.0%
TTCACCCGAGAAAAGTTCTA+GGG - chr6.3:69637925-69637944 MS.gene041667:intron 40.0%
TTGATCATCATCCTCCTCTT+TGG + chr6.3:69637171-69637190 None:intergenic 40.0%
! AGAAGAAGTGGAAGCGTAAT+TGG - chr6.3:69636253-69636272 MS.gene041667:CDS 40.0%
! AGTCGTCATTGATGACAGAT+AGG + chr6.3:69636147-69636166 None:intergenic 40.0%
! CTCATCCCTAGAACTTTTCT+CGG + chr6.3:69637933-69637952 None:intergenic 40.0%
! CTTGAAGCCGGAGAATATTT+TGG - chr6.3:69639387-69639406 MS.gene041667:CDS 40.0%
! CTTGGACCGTCAATTTTGTA+AGG + chr6.3:69636439-69636458 None:intergenic 40.0%
! GAGGATTCTTATTTCTCTGG+AGG - chr6.3:69637203-69637222 MS.gene041667:intron 40.0%
! GCAGAGGATTCTTATTTCTC+TGG - chr6.3:69637200-69637219 MS.gene041667:intron 40.0%
! GTCATTGATGACAGATAGGT+TGG + chr6.3:69636143-69636162 None:intergenic 40.0%
! GTGACTCTGAATGCTTTTGA+GGG - chr6.3:69637857-69637876 MS.gene041667:intron 40.0%
! TAATTTGTGACAGGGAAGAC+GGG + chr6.3:69636328-69636347 None:intergenic 40.0%
! TCAATTTTGTAAGGCTCTGC+AGG + chr6.3:69636430-69636449 None:intergenic 40.0%
! TCATCCCTAGAACTTTTCTC+GGG + chr6.3:69637932-69637951 None:intergenic 40.0%
! TCCCCTTTTCATTGTCACTA+GGG + chr6.3:69637107-69637126 None:intergenic 40.0%
! TGGAGAATTGATGGATGTAG+AGG - chr6.3:69637343-69637362 MS.gene041667:CDS 40.0%
!! TCAAAAGCATTCAGAGTCAC+CGG + chr6.3:69637857-69637876 None:intergenic 40.0%
!! TCACGTTTGATTTGCACTCA+TGG - chr6.3:69636392-69636411 MS.gene041667:intron 40.0%
!!! TAGTGAAGGTTTTGGTTCGT+CGG + chr6.3:69636302-69636321 None:intergenic 40.0%
AACAGTGATGCTGCTGACAT+CGG - chr6.3:69637533-69637552 MS.gene041667:CDS 45.0%
AATTTGTGACAGGGAAGACG+GGG + chr6.3:69636327-69636346 None:intergenic 45.0%
ACGGTTCAGTTAGGTCAATC+GGG - chr6.3:69637501-69637520 MS.gene041667:CDS 45.0%
AGTGACAATGAAAAGGGGAC+CGG - chr6.3:69637108-69637127 MS.gene041667:intron 45.0%
AGTTGGCTGTCTGTTAGTCA+AGG - chr6.3:69636939-69636958 MS.gene041667:intron 45.0%
ATGATCAGGCCATTTGTCTG+AGG + chr6.3:69637413-69637432 None:intergenic 45.0%
ATTTAACCACGGCGACTTAC+TGG + chr6.3:69637815-69637834 None:intergenic 45.0%
ATTTCTGTGGAGGCCAACTA+TGG + chr6.3:69638969-69638988 None:intergenic 45.0%
CACGGTTCAGTTAGGTCAAT+CGG - chr6.3:69637500-69637519 MS.gene041667:CDS 45.0%
CAGACAACCTATTGAGGATG+AGG - chr6.3:69637053-69637072 MS.gene041667:intron 45.0%
CTATCATGTCACCGAGTATC+TGG - chr6.3:69638085-69638104 MS.gene041667:CDS 45.0%
CTTCACCCGAGAAAAGTTCT+AGG - chr6.3:69637924-69637943 MS.gene041667:intron 45.0%
GAAGGAGGTAAGAACTTCTC+CGG + chr6.3:69636188-69636207 None:intergenic 45.0%
GACAAATGGCCTGATCATGT+TGG - chr6.3:69637415-69637434 MS.gene041667:CDS 45.0%
GACTTTGTCCCTCAGACAAA+TGG - chr6.3:69637401-69637420 MS.gene041667:CDS 45.0%
GGAACTGAATCTGATGCATG+CGG - chr6.3:69637364-69637383 MS.gene041667:CDS 45.0%
TAGGTATGAGGAAGGCTACA+GGG - chr6.3:69636913-69636932 MS.gene041667:intron 45.0%
TCCATTGGCATTAGCACAGA+GGG + chr6.3:69636736-69636755 None:intergenic 45.0%
TCTTTCTGTTGTTGCACTGC+AGG - chr6.3:69638731-69638750 MS.gene041667:intron 45.0%
TGATCAGGCCATTTGTCTGA+GGG + chr6.3:69637412-69637431 None:intergenic 45.0%
TGTGGAGTTCTGCTCACATT+CGG - chr6.3:69638864-69638883 MS.gene041667:intron 45.0%
TTAGGTATGAGGAAGGCTAC+AGG - chr6.3:69636912-69636931 MS.gene041667:intron 45.0%
TTCCATCTCCCAACATGATC+AGG + chr6.3:69637427-69637446 None:intergenic 45.0%
! ACGGGGAATAGTGAAGGTTT+TGG + chr6.3:69636310-69636329 None:intergenic 45.0%
! AGATAGGTTGGAAGTGAAGC+TGG + chr6.3:69636131-69636150 None:intergenic 45.0%
! GGTGACTCTGAATGCTTTTG+AGG - chr6.3:69637856-69637875 MS.gene041667:intron 45.0%
! GTCCCCTTTTCATTGTCACT+AGG + chr6.3:69637108-69637127 None:intergenic 45.0%
!! GTTCAGAACTGGCTTTGAAG+AGG - chr6.3:69638019-69638038 MS.gene041667:CDS 45.0%
!! TTTGATTTGTCGGAGGATGG+TGG + chr6.3:69636080-69636099 None:intergenic 45.0%
!!! ATTTGATTTAAAATTTAATT+AGG - chr6.3:69639122-69639141 MS.gene041667:intron 5.0%
AACCACCACCCTGAATCATC+TGG + chr6.3:69637792-69637811 None:intergenic 50.0%
AACCAGGCCTCATCCTCAAT+AGG + chr6.3:69637063-69637082 None:intergenic 50.0%
AACCTATTGAGGATGAGGCC+TGG - chr6.3:69637058-69637077 MS.gene041667:intron 50.0%
AAGCTGGAGTTACCGTGGTA+GGG + chr6.3:69636115-69636134 None:intergenic 50.0%
AAGTGAAGCTGGAGTTACCG+TGG + chr6.3:69636120-69636139 None:intergenic 50.0%
ACGGGTCAGATGTTCAGAAC+TGG - chr6.3:69638008-69638027 MS.gene041667:CDS 50.0%
ACTCCACAAACCTGCAACCT+TGG + chr6.3:69638852-69638871 None:intergenic 50.0%
AGGTATGAGGAAGGCTACAG+GGG - chr6.3:69636914-69636933 MS.gene041667:intron 50.0%
ATGCCAAGGTTGCAGGTTTG+TGG - chr6.3:69638846-69638865 MS.gene041667:intron 50.0%
CAAGGCCACTATCACGATCA+CGG + chr6.3:69637585-69637604 None:intergenic 50.0%
CCATTGGCATTAGCACAGAG+GGG + chr6.3:69636735-69636754 None:intergenic 50.0%
CGGTTCAGTTAGGTCAATCG+GGG - chr6.3:69637502-69637521 MS.gene041667:CDS 50.0%
CTACAGCCGATATGAGGTGA+AGG - chr6.3:69639417-69639436 MS.gene041667:CDS 50.0%
CTTCACAATGCCAAGGTTGC+AGG - chr6.3:69638839-69638858 MS.gene041667:intron 50.0%
GATAGCCAGATGATTCAGGG+TGG - chr6.3:69637784-69637803 MS.gene041667:intron 50.0%
GCATGCAATGGACACTGATG+TGG - chr6.3:69638915-69638934 MS.gene041667:intron 50.0%
GGATCACCTAACCCTATGAC+TGG + chr6.3:69637257-69637276 None:intergenic 50.0%
GTCCATTGGCATTAGCACAG+AGG + chr6.3:69636737-69636756 None:intergenic 50.0%
GTTCCAGATCCTCAGGAAAG+AGG - chr6.3:69637140-69637159 MS.gene041667:intron 50.0%
GTTGAGCCAGTCATAGGGTT+AGG - chr6.3:69637248-69637267 MS.gene041667:intron 50.0%
TCAGTTAGGTCAATCGGGGT+GGG - chr6.3:69637506-69637525 MS.gene041667:CDS 50.0%
TCATCATCCTCCTCTTTGGC+AGG + chr6.3:69637167-69637186 None:intergenic 50.0%
TGATGCATGCGGAACTTGTC+TGG - chr6.3:69637375-69637394 MS.gene041667:CDS 50.0%
TGCAATGGACACTGATGTGG+CGG - chr6.3:69638918-69638937 MS.gene041667:intron 50.0%
TGCAGCAGATCCCAGATACT+CGG + chr6.3:69638099-69638118 None:intergenic 50.0%
TTCAGTTAGGTCAATCGGGG+TGG - chr6.3:69637505-69637524 MS.gene041667:CDS 50.0%
! TTGCATTGGTACTCAACCGC+CGG - chr6.3:69636166-69636185 MS.gene041667:intron 50.0%
!! GTGATCGTGATAGTGGCCTT+GGG - chr6.3:69637584-69637603 MS.gene041667:CDS 50.0%
!! TGAGGATGAGGCCTGGTTTT+TGG - chr6.3:69637065-69637084 MS.gene041667:intron 50.0%
!! TGATCGTGATAGTGGCCTTG+GGG - chr6.3:69637585-69637604 MS.gene041667:CDS 50.0%
!!! TGAAGGTTTTGGTTCGTCGG+TGG + chr6.3:69636299-69636318 None:intergenic 50.0%
AAACATCCACGCCTGTGTGC+AGG + chr6.3:69638148-69638167 None:intergenic 55.0%
AAGAGGTCCTGCCAAAGAGG+AGG - chr6.3:69637157-69637176 MS.gene041667:intron 55.0%
AGCCAGATGATTCAGGGTGG+TGG - chr6.3:69637787-69637806 MS.gene041667:intron 55.0%
CAAGCTCATGACCTGCACAC+AGG - chr6.3:69638134-69638153 MS.gene041667:CDS 55.0%
CAATGAAAAGGGGACCGGCA+TGG - chr6.3:69637113-69637132 MS.gene041667:intron 55.0%
CCCCTCTGTGCTAATGCCAA+TGG - chr6.3:69636732-69636751 MS.gene041667:intron 55.0%
GAAGCTGGAGTTACCGTGGT+AGG + chr6.3:69636116-69636135 None:intergenic 55.0%
GACATCGGCAGTGAAGTGCA+TGG - chr6.3:69637548-69637567 MS.gene041667:CDS 55.0%
GGAAAGAGGTCCTGCCAAAG+AGG - chr6.3:69637154-69637173 MS.gene041667:intron 55.0%
GGACCTCTTTCCTGAGGATC+TGG + chr6.3:69637146-69637165 None:intergenic 55.0%
GGAGGTAAGAACTTCTCCGG+CGG + chr6.3:69636185-69636204 None:intergenic 55.0%
GGCCTGATCATGTTGGGAGA+TGG - chr6.3:69637422-69637441 MS.gene041667:CDS 55.0%
GGGAAGACGGGGAATAGTGA+AGG + chr6.3:69636316-69636335 None:intergenic 55.0%
GGTATGAGGAAGGCTACAGG+GGG - chr6.3:69636915-69636934 MS.gene041667:intron 55.0%
TGTTTGTGGTGTGACCGGAG+TGG + chr6.3:69639272-69639291 None:intergenic 55.0%
TTGGCAGGACCTCTTTCCTG+AGG + chr6.3:69637152-69637171 None:intergenic 55.0%
! GATCTGGAACGCTTCCATGC+CGG + chr6.3:69637130-69637149 None:intergenic 55.0%
! TGGTGGCGCCTAATTGTGCA+AGG + chr6.3:69636063-69636082 None:intergenic 55.0%
! TTTGGTTCGTCGGTGGACGA+TGG + chr6.3:69636292-69636311 None:intergenic 55.0%
!! CGTGATCGTGATAGTGGCCT+TGG - chr6.3:69637583-69637602 MS.gene041667:CDS 55.0%
!! GATCGTGATAGTGGCCTTGG+GGG - chr6.3:69637586-69637605 MS.gene041667:CDS 55.0%
!! GGGAGTGTTTAGATCCCCCA+AGG + chr6.3:69637603-69637622 None:intergenic 55.0%
!! TGGAAGCGTTCCAGATCCTC+AGG - chr6.3:69637133-69637152 MS.gene041667:intron 55.0%
GCATGCGGAACTTGTCTGGC+AGG - chr6.3:69637379-69637398 MS.gene041667:CDS 60.0%
GTGGTTCCAGTAAGTCGCCG+TGG - chr6.3:69637806-69637825 MS.gene041667:intron 60.0%
TCATGACCTGCACACAGGCG+TGG - chr6.3:69638139-69638158 MS.gene041667:CDS 60.0%
GGAAGGCTACAGGGGGCAGT+TGG - chr6.3:69636922-69636941 MS.gene041667:intron 65.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 69636046 69639593 69636046 ID=MS.gene041667
chr6.3 mRNA 69636046 69639593 69636046 ID=MS.gene041667.t1;Parent=MS.gene041667
chr6.3 exon 69639365 69639593 69639365 ID=MS.gene041667.t1.exon1;Parent=MS.gene041667.t1
chr6.3 CDS 69639365 69639593 69639365 ID=cds.MS.gene041667.t1;Parent=MS.gene041667.t1
chr6.3 exon 69639145 69639205 69639145 ID=MS.gene041667.t1.exon2;Parent=MS.gene041667.t1
chr6.3 CDS 69639145 69639205 69639145 ID=cds.MS.gene041667.t1;Parent=MS.gene041667.t1
chr6.3 exon 69638689 69638723 69638689 ID=MS.gene041667.t1.exon3;Parent=MS.gene041667.t1
chr6.3 CDS 69638689 69638723 69638689 ID=cds.MS.gene041667.t1;Parent=MS.gene041667.t1
chr6.3 exon 69637927 69638516 69637927 ID=MS.gene041667.t1.exon4;Parent=MS.gene041667.t1
chr6.3 CDS 69637927 69638516 69637927 ID=cds.MS.gene041667.t1;Parent=MS.gene041667.t1
chr6.3 exon 69637335 69637622 69637335 ID=MS.gene041667.t1.exon5;Parent=MS.gene041667.t1
chr6.3 CDS 69637335 69637622 69637335 ID=cds.MS.gene041667.t1;Parent=MS.gene041667.t1
chr6.3 exon 69636779 69636886 69636779 ID=MS.gene041667.t1.exon6;Parent=MS.gene041667.t1
chr6.3 CDS 69636779 69636886 69636779 ID=cds.MS.gene041667.t1;Parent=MS.gene041667.t1
chr6.3 exon 69636189 69636317 69636189 ID=MS.gene041667.t1.exon7;Parent=MS.gene041667.t1
chr6.3 CDS 69636189 69636317 69636189 ID=cds.MS.gene041667.t1;Parent=MS.gene041667.t1
chr6.3 exon 69636046 69636096 69636046 ID=MS.gene041667.t1.exon8;Parent=MS.gene041667.t1
chr6.3 CDS 69636046 69636096 69636046 ID=cds.MS.gene041667.t1;Parent=MS.gene041667.t1
Gene Sequence

>MS.gene041667

ATGGTAATGTTTAACCTTGCACAATTAGGCGCCACCATCCTCCGACAAATCAAAATATTCACTCTTCCCTACCACGGTAACTCCAGCTTCACTTCCAACCTATCTGTCATCAATGACGACTTGCATTGGTACTCAACCGCCGGAGAAGTTCTTACCTCCTTCCAGATTATTTGGAATCTGATGGAGACAGAACGTATAAGAGAAGGAAGAAGAAGTGGAAGCGTAATTGGTATGATGAAGACACCATCGTCCACCGACGAACCAAAACCTTCACTATTCCCCGTCTTCCCTGTCACAAATTATTTTCTTCAAATCAAGACTTTTTTGGTATAGCTCAGAAACTCCATCACGTTTGATTTGCACTCATGGAAGATTAATGTTCCTGCAGAGCCTTACAAAATTGACGGTCCAAGAAAGACTAGTAATATTTTGATGGCCTCGATACCTCAGTAATAAAAAACTCAAATGGTATTTTAAGTGATGATTAATTTATTAGGCTTATTTCTGACATTAAGTTCTGTGCATGACAATTTGACATACTCATTCTCTTTGATACCAATTGGATTGAGTTTCTACATTGAGTTTGTCTTAAGTTTAGAATGGGTATATGGCTATATGTGAATAATATTGGTTTCCTTAATGTCACACTCTTTATTGAATCAAAATGATTTAAATATTAGTTAGTTCCCCTCTGTGCTAATGCCAATGGACCACTAAATTCAAGGTTACCAATTAGGTAATGCCTAATTTTCCCCCATTAACTAATCTCAGTCATTTGTACATATCCAAAGATTACTTGTGATTTTTTTAAGTGACCATGCATGCTTTGTTACAAAGACCATGGGTTTGACCTTTTTGTATATGTTTTAGGTATGAGGAAGGCTACAGGGGGCAGTTGGCTGTCTGTTAGTCAAGGAATATCAGAGGATTCCTCCGAGTGAATTTGTTGATTATCCAAATGAATATTGGGACTCTGATGAATATGACGACGACGATGTTGAGTACATCAGACAACCTATTGAGGATGAGGCCTGGTTTTTGGCTTACGAAATTGATTACCCTAGTGACAATGAAAAGGGGACCGGCATGGAAGCGTTCCAGATCCTCAGGAAAGAGGTCCTGCCAAAGAGGAGGATGATGATCAATATTTCGCTGCAGAGGATTCTTATTTCTCTGGAGGGCAATATATTGAAGCAAAGAATGTTGAGCCAGTCATAGGGTTAGGTGATCCAATCGGTATAACGGTTACTAATATGTATGGAAGGTCTAATGGTAATGATTTAATGGCTCGATACGATGGAGAATTGATGGATGTAGAGGAACTGAATCTGATGCATGCGGAACTTGTCTGGCAGGACTTTGTCCCTCAGACAAATGGCCTGATCATGTTGGGAGATGGAAAAGTTCTGAATCATAGTGGAAGATCAAGACTAAAGGAAATGGAAGATGATCAACACGGTTCAGTTAGGTCAATCGGGGTGGGTTTCAACAGTGATGCTGCTGACATCGGCAGTGAAGTGCATGGAAGTCTTATTTCCGTGATCGTGATAGTGGCCTTGGGGGATCTAAACACTCCCATCATGATTTTGGAAAGAATTCTATGGACAAATCATTTAAAAATAAGAAGAAAAATGACGAAATTTAGTCGAATAAATATGTCATTGGAGGTCATAAAGATGCACGCTCACAAATAAAAACACATACTGATGGCAACTTCTCATTTCCTCAATCTCTTAAAGATAGCCAGATGATTCAGGGTGGTGGTTCCAGTAAGTCGCCGTGGTTAAATAATTGTAATGCGGATGAAACCGGTGACTCTGAATGCTTTTGAGGGATCTGATGAAATGCTTTCTTTATGGAGGCAGAAGAGTAGTGATTCTTCACCCGAGAAAAGTTCTAGGGATGAGAATAATGCTCATGCGGTCAGATGTTCGAACTCTTCTCCAACTACTGTCGATAATTACGGGTCAGATGTTCAGAACTGGCTTTGAAGAGGACAAGAATTTCCATGTTGTTTTAAATTCTGTAATAGCTGGTCGCTATCATGTCACCGAGTATCTGGGATCTGCTGCATTTAGTAAAGCTATACAAGCTCATGACCTGCACACAGGCGTGGATGTTTGTATTAAAATTATAAAGAACAACAAAGATTTCTTTGATCAAAGCCTTGATGAGATCAAACTGCTCAAGTATGTCAATAAGCATGATCCTGGAGACAAGTATCACATTTTACGGTTATATGATTATTTCTATTATAGAGTAAGTGATTTTGCATGTGCTACTGATCTTGTTAATACTATTACATTTTACGTCTCATCTATTAGTGCAACATTAGATACTGTCCTTCCTAGGCAATTTTAACATTAATTTAATAACGAGATATAGATGACTAAATATTTATTTGTTCTGACTTGACGTTGACTTTCTTCTTTAATATAACTGAATAAAGGTTGTTGCTGTGGTATTGATATTTACTTTTTACTTCTTCTATAGCCACTTAATGTGTTTGTGGCTATGGTATTTTTCAATACATTCCAGGATTTGTTATAAAATATAATTTTTCACACTGGTGTCATATTTTTGAAAGAATTGAATTACATTACGAGGACTAAACTTTTAAGCTATATACAAAGTGATGTTGAGATATATCGATTCACTTAATCATCTGACTTATCACGTTTCATTTCTTTCTGTTGTTGCACTGCAGGAACATTTGTTAATAGTATTTGAACTACTCAAAGCCAACTTATACGAGTTTCATAAATTCATCAGAGAATCAGGAGGGGAAGTGTACTTCACAATGCCAAGGTTGCAGGTTTGTGGAGTTCTGCTCACATTCGGATGTTAGTTTTCATTTTATATACAACTAGCATGCAATGGACACTGATGTGGCGGTCTATCCGCTTTTCTCTAATAGAGGCCATAGTTGGCCTCCACAGAAATTAAGTTTGAAGCTTTGGACAAAATTTTATTATTTAGTATTGTTATTTTATTTTGATTACGATATTTTTAATTCAAAATTGAATTAAGGTTGGTTTAGATTTGATTTTTTAGATTGATTTAAGGATTTTATTAGATTTGATTTAAAATTTAATTAGGATTAGATTAGATCAAATTTGAAGGGTAAAAATGTACACAGAAGAGTTTAAATGAAGGGTGAAATTGGAAGAAAAAAGCTACAGCAAACTTTAGTATTCTCTTTATATACAGGTATAGATAGATTCCACTCCGGTCACACCACAAACATTATAAACTTGTCTTGATTTGTTTTCGCAGTCAATTACCATTCAATGTTTGGAAGCACTTCAGTATTTACATAACCTTGGACTAATACATTGTGACTTGAAGCCGGAGAATATTTTGGTTAAAAGCTACAGCCGATATGAGGTGAAGGTCATTGATCTTGTAAGTATTATATATAGTCTATTCAGTTTCAAAATGCCATAAATATTTTCAAACTTAAGCATGTTAAGGTTCATGTCAAATTCGTGTTGAAGGTACATAAAAATGCTCTAGTTTTCCACTCTAATACATTAGGTCTAATTTAG
Protein sequence

>MS.gene041667.t1

MVMFNLAQLGATILRQIKIFTLPYHGNSSFTSNLSVINDDLHWYSTAGEVLTSFQIIWNLMETERIREGRRSGSVIEPYKIDGPRKTSNILMASIPQYEEGYRGQLAVWDRHGSVPDPQERGPAKEEDDDQYFAAEDSYFSGGQYIEAKNVEPVIGLGDPIGITVTNMYGRSNGNDLMARYDGELMDVEELNLMHAELVWQDFVPQTNGLIMLGDGKVLNHSGRSRLKEMEDDQHGSVRSIGVGFNSDAADIGSEVHGSLISVIVIVALGDLNTPIMILERILWTNHLKIRRKMTKFSRINMSLEMFRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGVDVCIKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHILRLYDYFYYREHLLIVFELLKANLYEFHKFIRESGGEVYFTMPRLQSITIQCLEALQYLHNLGLIHCDLKPENILVKSYSRYEVKVIDLVHKNALVFHSNTLGLI