Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041701.t1 | XP_013452818.1 | 95.3 | 471 | 18 | 2 | 1 | 471 | 1 | 467 | 1.00E-248 | 869 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041701.t1 | B3H5A8 | 35.1 | 479 | 169 | 14 | 1 | 470 | 27 | 372 | 6.7e-52 | 206.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041701.t1 | A0A072UBN0 | 95.3 | 471 | 18 | 2 | 1 | 471 | 1 | 467 | 7.2e-249 | 869.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene041701.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041701.t1 | MTR_6g477860 | 95.329 | 471 | 18 | 2 | 1 | 471 | 1 | 467 | 0.0 | 877 |
| MS.gene041701.t1 | MTR_6g477860 | 94.837 | 368 | 15 | 2 | 104 | 471 | 9 | 372 | 0.0 | 664 |
| MS.gene041701.t1 | MTR_3g064500 | 50.204 | 245 | 107 | 5 | 38 | 280 | 38 | 269 | 1.34e-55 | 189 |
| MS.gene041701.t1 | MTR_5g076960 | 46.800 | 250 | 119 | 5 | 35 | 280 | 21 | 260 | 7.20e-47 | 167 |
| MS.gene041701.t1 | MTR_1g067000 | 56.250 | 112 | 38 | 3 | 38 | 149 | 28 | 128 | 2.28e-34 | 130 |
| MS.gene041701.t1 | MTR_8g028655 | 60.638 | 94 | 29 | 2 | 46 | 139 | 53 | 138 | 1.39e-32 | 127 |
| MS.gene041701.t1 | MTR_0123s0070 | 54.783 | 115 | 41 | 4 | 46 | 158 | 39 | 144 | 3.76e-32 | 124 |
| MS.gene041701.t1 | MTR_0123s0070 | 54.783 | 115 | 41 | 4 | 46 | 158 | 39 | 144 | 5.58e-32 | 124 |
| MS.gene041701.t1 | MTR_7g118330 | 68.269 | 104 | 31 | 1 | 38 | 139 | 7 | 110 | 1.32e-31 | 129 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041701.t1 | AT1G18330 | 40.616 | 357 | 138 | 12 | 46 | 395 | 39 | 328 | 5.33e-58 | 195 |
| MS.gene041701.t1 | AT1G18330 | 43.791 | 306 | 104 | 9 | 46 | 345 | 65 | 308 | 6.96e-58 | 196 |
| MS.gene041701.t1 | AT5G17300 | 66.250 | 160 | 43 | 3 | 40 | 199 | 38 | 186 | 2.93e-52 | 181 |
| MS.gene041701.t1 | AT3G10113 | 66.667 | 135 | 36 | 1 | 46 | 180 | 54 | 179 | 9.29e-46 | 162 |
| MS.gene041701.t1 | AT5G37260 | 55.814 | 172 | 61 | 3 | 33 | 204 | 12 | 168 | 1.31e-44 | 158 |
| MS.gene041701.t1 | AT3G09600 | 60.638 | 94 | 29 | 2 | 46 | 139 | 32 | 117 | 1.81e-32 | 125 |
| MS.gene041701.t1 | AT3G09600 | 60.638 | 94 | 29 | 2 | 46 | 139 | 32 | 117 | 1.81e-32 | 125 |
| MS.gene041701.t1 | AT3G09600 | 60.638 | 94 | 29 | 2 | 46 | 139 | 32 | 117 | 1.94e-32 | 125 |
| MS.gene041701.t1 | AT3G09600 | 60.638 | 94 | 29 | 2 | 46 | 139 | 32 | 117 | 1.98e-32 | 125 |
| MS.gene041701.t1 | AT3G09600 | 60.638 | 94 | 29 | 2 | 46 | 139 | 32 | 117 | 1.98e-32 | 125 |
| MS.gene041701.t1 | AT5G52660 | 59.184 | 98 | 32 | 2 | 42 | 139 | 57 | 146 | 1.31e-31 | 124 |
| MS.gene041701.t1 | AT5G52660 | 59.184 | 98 | 32 | 2 | 42 | 139 | 57 | 146 | 1.39e-31 | 124 |
| MS.gene041701.t1 | AT1G01520 | 59.574 | 94 | 30 | 2 | 46 | 139 | 50 | 135 | 5.81e-31 | 121 |
| MS.gene041701.t1 | AT1G01520 | 59.574 | 94 | 30 | 2 | 46 | 139 | 50 | 135 | 7.25e-31 | 121 |
| MS.gene041701.t1 | AT1G01520 | 59.574 | 94 | 30 | 2 | 46 | 139 | 50 | 135 | 7.77e-31 | 120 |
| MS.gene041701.t1 | AT1G01520 | 59.574 | 94 | 30 | 2 | 46 | 139 | 50 | 135 | 7.77e-31 | 120 |
| MS.gene041701.t1 | AT1G01060 | 58.491 | 106 | 42 | 1 | 35 | 138 | 2 | 107 | 1.49e-30 | 125 |
| MS.gene041701.t1 | AT1G01060 | 58.491 | 106 | 42 | 1 | 35 | 138 | 2 | 107 | 1.59e-30 | 125 |
| MS.gene041701.t1 | AT1G01060 | 58.491 | 106 | 42 | 1 | 35 | 138 | 2 | 107 | 1.59e-30 | 125 |
| MS.gene041701.t1 | AT1G01060 | 58.491 | 106 | 42 | 1 | 35 | 138 | 2 | 107 | 1.59e-30 | 125 |
| MS.gene041701.t1 | AT1G01060 | 58.491 | 106 | 42 | 1 | 35 | 138 | 2 | 107 | 1.59e-30 | 125 |
| MS.gene041701.t1 | AT1G01060 | 58.491 | 106 | 42 | 1 | 35 | 138 | 2 | 107 | 1.59e-30 | 125 |
| MS.gene041701.t1 | AT4G01280 | 60.638 | 94 | 29 | 2 | 46 | 139 | 48 | 133 | 1.61e-30 | 120 |
| MS.gene041701.t1 | AT5G02840 | 47.015 | 134 | 47 | 4 | 46 | 163 | 37 | 162 | 1.71e-30 | 120 |
| MS.gene041701.t1 | AT4G01280 | 60.638 | 94 | 29 | 2 | 46 | 139 | 48 | 133 | 1.72e-30 | 120 |
| MS.gene041701.t1 | AT5G02840 | 47.015 | 134 | 47 | 4 | 46 | 163 | 37 | 162 | 1.80e-30 | 119 |
| MS.gene041701.t1 | AT5G02840 | 47.015 | 134 | 47 | 4 | 46 | 163 | 37 | 162 | 1.94e-30 | 120 |
| MS.gene041701.t1 | AT5G02840 | 47.015 | 134 | 47 | 4 | 46 | 163 | 37 | 162 | 1.94e-30 | 120 |
| MS.gene041701.t1 | AT5G02840 | 47.015 | 134 | 47 | 4 | 46 | 163 | 37 | 162 | 2.76e-30 | 119 |
| MS.gene041701.t1 | AT2G46830 | 63.529 | 85 | 31 | 0 | 38 | 122 | 5 | 89 | 3.46e-30 | 124 |
| MS.gene041701.t1 | AT5G17300 | 59.322 | 118 | 37 | 3 | 82 | 199 | 5 | 111 | 1.11e-21 | 95.9 |
| MS.gene041701.t1 | AT3G09600 | 50.769 | 65 | 24 | 2 | 75 | 139 | 5 | 61 | 6.94e-15 | 74.7 |
| MS.gene041701.t1 | AT3G09600 | 50.769 | 65 | 24 | 2 | 75 | 139 | 5 | 61 | 6.94e-15 | 74.7 |
| MS.gene041701.t1 | AT3G09600 | 50.769 | 65 | 24 | 2 | 75 | 139 | 5 | 61 | 9.86e-15 | 73.9 |
| MS.gene041701.t1 | AT3G09600 | 50.769 | 65 | 24 | 2 | 75 | 139 | 5 | 61 | 9.86e-15 | 73.9 |
Find 118 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTCCTCCTCAGATGGTT+TGG | 0.248334 | 6.3:-70434958 | None:intergenic |
| CATATTTGCAGCATCTTCTT+TGG | 0.255626 | 6.3:-70435440 | None:intergenic |
| TCGAATCTGAACTGCAGTTT+TGG | 0.267753 | 6.3:-70434377 | None:intergenic |
| CCTCAGATGGTTTGGATGTC+TGG | 0.272930 | 6.3:-70434950 | None:intergenic |
| CTCTGCAACTGACAGGTTAA+TGG | 0.279753 | 6.3:-70434766 | None:intergenic |
| GTTTGGTCGAACACTATCTA+TGG | 0.282785 | 6.3:+70435486 | MS.gene041701:CDS |
| AATGCGCAACTTTACCATTA+TGG | 0.288861 | 6.3:+70435710 | MS.gene041701:CDS |
| TTCTTAATCCTGTGCCTCTT+AGG | 0.290915 | 6.3:+70435785 | MS.gene041701:CDS |
| CTTTGTTTAGTGATGGTATA+CGG | 0.298682 | 6.3:-70434166 | None:intergenic |
| GATGAAAATTCTTTAATTGC+TGG | 0.298848 | 6.3:+70436012 | MS.gene041701:CDS |
| GGAGATGTTTCTGATTCATT+TGG | 0.303011 | 6.3:-70434741 | None:intergenic |
| CACTGAATCAGTTTGCGATA+TGG | 0.310791 | 6.3:+70435861 | MS.gene041701:CDS |
| CACCGACTCAAAACCACTTA+TGG | 0.354311 | 6.3:+70435010 | MS.gene041701:CDS |
| GTTGCGCATTCGCCGACATA+TGG | 0.355277 | 6.3:-70435697 | None:intergenic |
| ACCCTCTTCCAGATTTCTTA+AGG | 0.359010 | 6.3:-70435957 | None:intergenic |
| AATCTTCATGCAGAACATAT+AGG | 0.364568 | 6.3:+70434352 | MS.gene041701:intron |
| GAGATGTTTCTGATTCATTT+GGG | 0.373672 | 6.3:-70434740 | None:intergenic |
| GGAGTTGTCCTTAAGAAATC+TGG | 0.375864 | 6.3:+70435949 | MS.gene041701:CDS |
| AGCTATCAACTCTAATGAAA+TGG | 0.384116 | 6.3:+70435555 | MS.gene041701:CDS |
| ATCACTAGTATTAAGCTGTT+TGG | 0.389280 | 6.3:+70435469 | MS.gene041701:CDS |
| GGTATGTCAATTGGCTGAAT+AGG | 0.403494 | 6.3:-70434642 | None:intergenic |
| TTCAGACTGTAATCCACCTT+TGG | 0.404938 | 6.3:-70433745 | None:intergenic |
| GGATGAAGGGGTTTCCTCTT+CGG | 0.405395 | 6.3:-70434675 | None:intergenic |
| ATCTCGGTGGTGCAAGAATT+AGG | 0.408707 | 6.3:-70434885 | None:intergenic |
| TCACTAAACAAAGGGAGAAA+TGG | 0.418116 | 6.3:+70434176 | MS.gene041701:CDS |
| CTTGAGGCTTTGAAACTGTA+TGG | 0.421259 | 6.3:+70434223 | MS.gene041701:CDS |
| AAATTCTTTAATTGCTGGCT+TGG | 0.424959 | 6.3:+70436017 | MS.gene041701:CDS |
| CCTTGGTACAAACTCCATAA+TGG | 0.425270 | 6.3:-70435724 | None:intergenic |
| CCTTTCTCTTCCTCCTCAGA+TGG | 0.426336 | 6.3:-70434963 | None:intergenic |
| ATCTTCATGCAGAACATATA+GGG | 0.428042 | 6.3:+70434353 | MS.gene041701:intron |
| TTCCTCTTCGGCCGAGGAGG+AGG | 0.434146 | 6.3:-70434663 | None:intergenic |
| CTGCTCACTTGAGCTCCATC+AGG | 0.436145 | 6.3:-70435652 | None:intergenic |
| GGACTTTCAGCACTGCCATC+AGG | 0.443949 | 6.3:-70434621 | None:intergenic |
| TGTACTATCTGCACTTGGTT+CGG | 0.448970 | 6.3:+70434812 | MS.gene041701:CDS |
| TCAACTGATTTGCGAGGGTA+TGG | 0.453549 | 6.3:-70434696 | None:intergenic |
| GTTCAAGGCACTAAGTCAAC+TGG | 0.454976 | 6.3:+70433702 | MS.gene041701:CDS |
| TTTCTCCCTTTGTTTAGTGA+TGG | 0.457327 | 6.3:-70434173 | None:intergenic |
| CCGACATATGGATTCTCCTT+CGG | 0.459009 | 6.3:-70435685 | None:intergenic |
| CGAGGAGGAGGTATGTCAAT+TGG | 0.460852 | 6.3:-70434651 | None:intergenic |
| TGGATGATCTTGAGAAGGTT+GGG | 0.471398 | 6.3:+70435575 | MS.gene041701:CDS |
| TGAATGTAGGATCAAGTTCA+AGG | 0.473815 | 6.3:+70433687 | MS.gene041701:intron |
| AGCTTAATACTAGTGATTTG+TGG | 0.477782 | 6.3:-70435463 | None:intergenic |
| GAAGATAATAGCAAGAGAAG+AGG | 0.482480 | 6.3:+70435816 | MS.gene041701:CDS |
| CGGAAACAACCTTGCTCCCA+AGG | 0.482656 | 6.3:+70433800 | MS.gene041701:CDS |
| GGTGGAAAGCTGGAAGGCCT+TGG | 0.485291 | 6.3:-70435741 | None:intergenic |
| ATTTGCGAGGGTATGGATGA+AGG | 0.487003 | 6.3:-70434689 | None:intergenic |
| ATCTTCAAACAAGGCCTAAG+AGG | 0.488954 | 6.3:-70435799 | None:intergenic |
| GCACTTGGTTCGGAAGCATT+CGG | 0.498985 | 6.3:+70434822 | MS.gene041701:CDS |
| AGGGGTTTCCTCTTCGGCCG+AGG | 0.499231 | 6.3:-70434669 | None:intergenic |
| CATGGCATGAGGTGGAAAGC+TGG | 0.502566 | 6.3:-70435751 | None:intergenic |
| TATCATACCATGGCCATAAG+TGG | 0.502925 | 6.3:-70435023 | None:intergenic |
| TACTTGGTTGCAGGTTGTGC+GGG | 0.506493 | 6.3:+70434596 | MS.gene041701:intron |
| CGTGGCTGGCGTCAAATTGA+AGG | 0.507871 | 6.3:+70434247 | MS.gene041701:CDS |
| TTTGGAAGATTGAGTTTCCT+CGG | 0.510593 | 6.3:-70435422 | None:intergenic |
| CAACAGGTGACAAGCTGACC+GGG | 0.515360 | 6.3:-70434911 | None:intergenic |
| ATTTGCTACAATGGAGACTA+AGG | 0.515528 | 6.3:+70432381 | None:intergenic |
| TCAACAGGTGACAAGCTGAC+CGG | 0.517384 | 6.3:-70434912 | None:intergenic |
| TGAAACTGTATGGTCGTGGC+TGG | 0.519020 | 6.3:+70434233 | MS.gene041701:CDS |
| CCATCTGAGGAGGAAGAGAA+AGG | 0.527813 | 6.3:+70434963 | MS.gene041701:CDS |
| CAAGCTGACCGGGTGAATCT+CGG | 0.528860 | 6.3:-70434901 | None:intergenic |
| TTAAGAATTTGATGATTGCA+TGG | 0.529235 | 6.3:-70435769 | None:intergenic |
| TGTCATTCTCTGCAACTGAC+AGG | 0.535506 | 6.3:-70434773 | None:intergenic |
| ATGGATGATCTTGAGAAGGT+TGG | 0.536503 | 6.3:+70435574 | MS.gene041701:CDS |
| TTTGGTCGAACACTATCTAT+GGG | 0.537064 | 6.3:+70435487 | MS.gene041701:CDS |
| GCAAGGTTGTTTCCGACAGA+AGG | 0.537798 | 6.3:-70433792 | None:intergenic |
| TTGCGAGGGTATGGATGAAG+GGG | 0.537852 | 6.3:-70434687 | None:intergenic |
| TTTGCGAGGGTATGGATGAA+GGG | 0.538270 | 6.3:-70434688 | None:intergenic |
| GTCCTTAAGAAATCTGGAAG+AGG | 0.539236 | 6.3:+70435955 | MS.gene041701:CDS |
| GTATACCATCACTAAACAAA+GGG | 0.540490 | 6.3:+70434168 | MS.gene041701:CDS |
| GTAAAACAACCTTGGGAGCA+AGG | 0.542630 | 6.3:-70433809 | None:intergenic |
| CTCAAAACCACTTATGGCCA+TGG | 0.544250 | 6.3:+70435016 | MS.gene041701:CDS |
| TGACTCTTTCAAAGGACAGT+TGG | 0.545667 | 6.3:+70434716 | MS.gene041701:CDS |
| ACCTCTGTACTATCTGCACT+TGG | 0.545955 | 6.3:+70434807 | MS.gene041701:CDS |
| CTACTTGGTTGCAGGTTGTG+CGG | 0.548743 | 6.3:+70434595 | MS.gene041701:intron |
| CTTGCTATTATCTTCAAACA+AGG | 0.551156 | 6.3:-70435808 | None:intergenic |
| AAACAAGGCCTAAGAGGCAC+AGG | 0.552171 | 6.3:-70435793 | None:intergenic |
| CTAGGCATGTGTACACCTGA+TGG | 0.552985 | 6.3:+70435637 | MS.gene041701:CDS |
| GTCCGAGATTATTTCTTCCG+AGG | 0.553467 | 6.3:+70435405 | MS.gene041701:CDS |
| GGTTTCCTCTTCGGCCGAGG+AGG | 0.557391 | 6.3:-70434666 | None:intergenic |
| AAATCAGTTGACTCTTTCAA+AGG | 0.561001 | 6.3:+70434708 | MS.gene041701:CDS |
| TGAAAATGATGCTAAGTCGC+AGG | 0.563551 | 6.3:+70433764 | MS.gene041701:CDS |
| TCCTTAAGAAATCTGGAAGA+GGG | 0.563781 | 6.3:+70435956 | MS.gene041701:CDS |
| TTCCTCGGAAGAAATAATCT+CGG | 0.576521 | 6.3:-70435407 | None:intergenic |
| GAAGAGGAAAGCTCTTGCAC+TGG | 0.577825 | 6.3:+70435832 | MS.gene041701:CDS |
| TACCTCCTCCTCGGCCGAAG+AGG | 0.581749 | 6.3:+70434661 | MS.gene041701:CDS |
| CGTATACCATCACTAAACAA+AGG | 0.584691 | 6.3:+70434167 | MS.gene041701:CDS |
| ATCGCAAACTGATTCAGTGT+TGG | 0.585409 | 6.3:-70435857 | None:intergenic |
| TGCTGGCTTGGAAGAAAGAG+AGG | 0.586743 | 6.3:+70436029 | MS.gene041701:CDS |
| ACTGTAATCCACCTTTGGAA+TGG | 0.588366 | 6.3:-70433740 | None:intergenic |
| GGGTTCTCAGAAGTCAATGA+AGG | 0.589070 | 6.3:+70435507 | MS.gene041701:CDS |
| CCAGACATCCAAACCATCTG+AGG | 0.593425 | 6.3:+70434950 | MS.gene041701:CDS |
| CAGGTTGTGCGGGAACCTGA+TGG | 0.598426 | 6.3:+70434606 | MS.gene041701:intron |
| TTGCACCACCGAGATTCACC+CGG | 0.599354 | 6.3:+70434893 | MS.gene041701:CDS |
| CTTGATACAGAATTATCACT+AGG | 0.603577 | 6.3:+70435619 | MS.gene041701:CDS |
| GCTTTGAAACTGTATGGTCG+TGG | 0.606371 | 6.3:+70434229 | MS.gene041701:CDS |
| AGTAAGTGCCATTCCAAAGG+TGG | 0.606494 | 6.3:+70433732 | MS.gene041701:CDS |
| GCAACTGACAGGTTAATGGA+TGG | 0.609719 | 6.3:-70434762 | None:intergenic |
| GCATGAGGTGGAAAGCTGGA+AGG | 0.615795 | 6.3:-70435747 | None:intergenic |
| GATGATTGCATGGCATGAGG+TGG | 0.625757 | 6.3:-70435759 | None:intergenic |
| AAGAGTCAACTGATTTGCGA+GGG | 0.626425 | 6.3:-70434701 | None:intergenic |
| GCTAGTAAGTGCCATTCCAA+AGG | 0.631426 | 6.3:+70433729 | MS.gene041701:CDS |
| AGTGCAGATAGTACAGAGGT+TGG | 0.636802 | 6.3:-70434804 | None:intergenic |
| AAAGAGTCAACTGATTTGCG+AGG | 0.637562 | 6.3:-70434702 | None:intergenic |
| GACATCCAAACCATCTGAGG+AGG | 0.638275 | 6.3:+70434953 | MS.gene041701:CDS |
| TGGAGCTCAAGTGAGCAGCA+TGG | 0.641800 | 6.3:+70435657 | MS.gene041701:CDS |
| TCGCAGGATATACCTTCTGT+CGG | 0.642530 | 6.3:+70433780 | MS.gene041701:CDS |
| CAATTGACATACCTCCTCCT+CGG | 0.655187 | 6.3:+70434652 | MS.gene041701:CDS |
| AAGAATTAGGAGAAAGACAT+CGG | 0.655270 | 6.3:-70434872 | None:intergenic |
| TGAAATGGATGATCTTGAGA+AGG | 0.659901 | 6.3:+70435570 | MS.gene041701:CDS |
| TTTGATGATTGCATGGCATG+AGG | 0.660991 | 6.3:-70435762 | None:intergenic |
| CCGAAGGAGAATCCATATGT+CGG | 0.663355 | 6.3:+70435685 | MS.gene041701:CDS |
| CCATTATGGAGTTTGTACCA+AGG | 0.666026 | 6.3:+70435724 | MS.gene041701:CDS |
| GAGCAGCATGGAACAACCGA+AGG | 0.671244 | 6.3:+70435669 | MS.gene041701:CDS |
| CATACAGTTTCAAAGCCTCA+AGG | 0.678034 | 6.3:-70434222 | None:intergenic |
| GCTGGCTTGGAAGAAAGAGA+GGG | 0.682057 | 6.3:+70436030 | MS.gene041701:CDS |
| AGAGCATCAAAAGTTCCTTG+AGG | 0.714656 | 6.3:+70434207 | MS.gene041701:CDS |
| GCTGACCGGGTGAATCTCGG+TGG | 0.721988 | 6.3:-70434898 | None:intergenic |
| ACCAAGTGCAGATAGTACAG+AGG | 0.725278 | 6.3:-70434808 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACACTTAAATATTTAATTA+TGG | - | chr6.3:70433852-70433871 | None:intergenic | 10.0% |
| !! | TCTCAAATAATAAATTAATA+TGG | + | chr6.3:70432905-70432924 | MS.gene041701:intron | 10.0% |
| !! | AAAAGTAAAATTGAAACAAA+AGG | - | chr6.3:70434107-70434126 | None:intergenic | 15.0% |
| !! | AAAGTAAAATTGAAACAAAA+GGG | - | chr6.3:70434106-70434125 | None:intergenic | 15.0% |
| !! | ATTAAGATCAAAAACATAAA+AGG | - | chr6.3:70432450-70432469 | None:intergenic | 15.0% |
| !! | TAAAAAAGTTCTATAGAAAA+TGG | + | chr6.3:70432846-70432865 | MS.gene041701:intron | 15.0% |
| !! | TTAAGATCAAAAACATAAAA+GGG | - | chr6.3:70432449-70432468 | None:intergenic | 15.0% |
| !! | ATTTCAAAACTAGTAAGATA+TGG | - | chr6.3:70435365-70435384 | None:intergenic | 20.0% |
| !! | TGAAAATTGAAATAAGTTTC+AGG | - | chr6.3:70434133-70434152 | None:intergenic | 20.0% |
| !!! | AACTTATTTCAATTTTCAAC+AGG | + | chr6.3:70434135-70434154 | MS.gene041701:intron | 20.0% |
| !!! | AATAATTTATGACACTGTTT+TGG | + | chr6.3:70435147-70435166 | MS.gene041701:intron | 20.0% |
| !!! | ATATTCTTTGATTTAGCTTA+TGG | + | chr6.3:70435055-70435074 | MS.gene041701:intron | 20.0% |
| !!! | ATTTGTGTTTGTACTTTTTA+CGG | + | chr6.3:70432756-70432775 | MS.gene041701:intron | 20.0% |
| !!! | GATTTTTAATTGGACTTTAA+AGG | + | chr6.3:70434491-70434510 | MS.gene041701:intron | 20.0% |
| !!! | TAGAGTATTTTAGTTTCATA+GGG | + | chr6.3:70432819-70432838 | MS.gene041701:intron | 20.0% |
| !!! | TATAGAAATAATTTGTACAC+AGG | + | chr6.3:70435292-70435311 | MS.gene041701:intron | 20.0% |
| !!! | TCTATAAGTTAACCTTATTT+AGG | - | chr6.3:70433184-70433203 | None:intergenic | 20.0% |
| !!! | TGCATTTTCTAAAAAAAGTA+AGG | + | chr6.3:70432472-70432491 | MS.gene041701:intron | 20.0% |
| !!! | TGTAGATTTGGATTTTTAAT+TGG | + | chr6.3:70434481-70434500 | MS.gene041701:intron | 20.0% |
| !!! | TTTTTCAGTTCATTGAATAA+CGG | + | chr6.3:70432594-70432613 | MS.gene041701:intron | 20.0% |
| ! | AAAACTAGTAAGATATGGTT+TGG | - | chr6.3:70435360-70435379 | None:intergenic | 25.0% |
| ! | AAACCAAAAGATAAAGACAA+GGG | - | chr6.3:70433622-70433641 | None:intergenic | 25.0% |
| ! | AAGTTCTATAGAAAATGGAT+TGG | + | chr6.3:70432851-70432870 | MS.gene041701:intron | 25.0% |
| ! | CTGAAATATCACTGAATATT+TGG | + | chr6.3:70433335-70433354 | MS.gene041701:intron | 25.0% |
| ! | GAACCTGAAAAAAGATTATT+TGG | + | chr6.3:70432640-70432659 | MS.gene041701:intron | 25.0% |
| ! | GAAGGTTATAAATGTAGATT+TGG | + | chr6.3:70434469-70434488 | MS.gene041701:intron | 25.0% |
| ! | GATGAAAATTCTTTAATTGC+TGG | + | chr6.3:70436012-70436031 | MS.gene041701:CDS | 25.0% |
| ! | GATTAAATAACTGATGTATC+TGG | + | chr6.3:70432546-70432565 | MS.gene041701:intron | 25.0% |
| ! | GTTGAAATTGTTAAATCTTC+TGG | + | chr6.3:70433088-70433107 | MS.gene041701:intron | 25.0% |
| ! | TACATGAAAATTATCAACTG+AGG | - | chr6.3:70433289-70433308 | None:intergenic | 25.0% |
| ! | TTATATCTAACTAGAAGACA+TGG | - | chr6.3:70434323-70434342 | None:intergenic | 25.0% |
| !! | AATTGTTAAATCTTCTGGTT+CGG | + | chr6.3:70433093-70433112 | MS.gene041701:intron | 25.0% |
| !! | ATTTCAATTTTCAACAGGTT+AGG | + | chr6.3:70434140-70434159 | MS.gene041701:intron | 25.0% |
| !! | CTCAACAAAAATATCTTTTC+AGG | + | chr6.3:70432517-70432536 | MS.gene041701:intron | 25.0% |
| !! | TCAGCTAAACATCTTTTATA+TGG | - | chr6.3:70435988-70436007 | None:intergenic | 25.0% |
| !! | TTAAGAATTTGATGATTGCA+TGG | - | chr6.3:70435772-70435791 | None:intergenic | 25.0% |
| !! | TTAATTGGACTTTAAAGGAA+AGG | + | chr6.3:70434496-70434515 | MS.gene041701:intron | 25.0% |
| !!! | CAACCAAATAATCTTTTTTC+AGG | - | chr6.3:70432646-70432665 | None:intergenic | 25.0% |
| !!! | CATAAAAGGGTATTCAAAAA+AGG | - | chr6.3:70432436-70432455 | None:intergenic | 25.0% |
| !!! | GTAGAGTATTTTAGTTTCAT+AGG | + | chr6.3:70432818-70432837 | MS.gene041701:intron | 25.0% |
| !!! | TCAATTTTTTGTTGTCGAAA+CGG | + | chr6.3:70433641-70433660 | MS.gene041701:intron | 25.0% |
| !!! | TTTTTGAGTTTGAGAATCAT+CGG | - | chr6.3:70435917-70435936 | None:intergenic | 25.0% |
| AAAAGATAAAGACAAGGGAT+TGG | - | chr6.3:70433617-70433636 | None:intergenic | 30.0% | |
| AAAGATAAAGACAAGGGATT+GGG | - | chr6.3:70433616-70433635 | None:intergenic | 30.0% | |
| AAGAATTAGGAGAAAGACAT+CGG | - | chr6.3:70434875-70434894 | None:intergenic | 30.0% | |
| AATCTTCATGCAGAACATAT+AGG | + | chr6.3:70434352-70434371 | MS.gene041701:intron | 30.0% | |
| AATTGATTGCTGAATCATTC+TGG | + | chr6.3:70433142-70433161 | MS.gene041701:intron | 30.0% | |
| AATTGGAAAACAATCAGTGT+TGG | - | chr6.3:70434074-70434093 | None:intergenic | 30.0% | |
| ACTAGAAAGTAAAACAACCT+TGG | - | chr6.3:70433820-70433839 | None:intergenic | 30.0% | |
| AGCTATCAACTCTAATGAAA+TGG | + | chr6.3:70435555-70435574 | MS.gene041701:CDS | 30.0% | |
| AGCTTAATACTAGTGATTTG+TGG | - | chr6.3:70435466-70435485 | None:intergenic | 30.0% | |
| ATCACTAGTATTAAGCTGTT+TGG | + | chr6.3:70435469-70435488 | MS.gene041701:CDS | 30.0% | |
| ATCTTCATGCAGAACATATA+GGG | + | chr6.3:70434353-70434372 | MS.gene041701:intron | 30.0% | |
| CTAGAAAGTAAAACAACCTT+GGG | - | chr6.3:70433819-70433838 | None:intergenic | 30.0% | |
| CTTGATACAGAATTATCACT+AGG | + | chr6.3:70435619-70435638 | MS.gene041701:CDS | 30.0% | |
| GAAACCAAAAGATAAAGACA+AGG | - | chr6.3:70433623-70433642 | None:intergenic | 30.0% | |
| GTAAAATTGAAACAAAAGGG+TGG | - | chr6.3:70434103-70434122 | None:intergenic | 30.0% | |
| GTATACCATCACTAAACAAA+GGG | + | chr6.3:70434168-70434187 | MS.gene041701:CDS | 30.0% | |
| GTCAAAATGTTGTCAAATAC+CGG | + | chr6.3:70433974-70433993 | MS.gene041701:intron | 30.0% | |
| GTTAGTATGTGAGATTTGAT+CGG | + | chr6.3:70433382-70433401 | MS.gene041701:intron | 30.0% | |
| GTTCAATTGTTTGAATCTTC+TGG | + | chr6.3:70433039-70433058 | MS.gene041701:intron | 30.0% | |
| TAATTATTGCTCGCAAATGA+AGG | + | chr6.3:70434451-70434470 | MS.gene041701:intron | 30.0% | |
| TAGTTGAGTCGTAATTTGAT+CGG | + | chr6.3:70432928-70432947 | MS.gene041701:intron | 30.0% | |
| TCAAATATGCTAATCCATAC+AGG | - | chr6.3:70435111-70435130 | None:intergenic | 30.0% | |
| TTAGTATGTGAGATTTGATC+GGG | + | chr6.3:70433383-70433402 | MS.gene041701:intron | 30.0% | |
| ! | AAATCAGTTGACTCTTTCAA+AGG | + | chr6.3:70434708-70434727 | MS.gene041701:CDS | 30.0% |
| ! | AAATTCTTTAATTGCTGGCT+TGG | + | chr6.3:70436017-70436036 | MS.gene041701:CDS | 30.0% |
| ! | AATCCCTTGTCTTTATCTTT+TGG | + | chr6.3:70433616-70433635 | MS.gene041701:intron | 30.0% |
| ! | ATTGTTTGAATCTTCTGGTT+CGG | + | chr6.3:70433044-70433063 | MS.gene041701:intron | 30.0% |
| ! | CCTCTTTTCATAGTAAAAGA+GGG | + | chr6.3:70433506-70433525 | MS.gene041701:intron | 30.0% |
| ! | CTTTGTTTAGTGATGGTATA+CGG | - | chr6.3:70434169-70434188 | None:intergenic | 30.0% |
| ! | GAGATGTTTCTGATTCATTT+GGG | - | chr6.3:70434743-70434762 | None:intergenic | 30.0% |
| ! | TAGAGAAAAACTTTTGAGCA+TGG | - | chr6.3:70434405-70434424 | None:intergenic | 30.0% |
| ! | TCCTCTTTTCATAGTAAAAG+AGG | + | chr6.3:70433505-70433524 | MS.gene041701:intron | 30.0% |
| ! | TGCTCAAAAGTTTTTCTCTA+AGG | + | chr6.3:70434405-70434424 | MS.gene041701:CDS | 30.0% |
| !! | CGACTCATGTTTAAGATTTT+AGG | + | chr6.3:70435084-70435103 | MS.gene041701:intron | 30.0% |
| !! | CTTGCTATTATCTTCAAACA+AGG | - | chr6.3:70435811-70435830 | None:intergenic | 30.0% |
| !!! | CAATCGTTTTCTTTTTCAAC+AGG | - | chr6.3:70434930-70434949 | None:intergenic | 30.0% |
| !!! | CATTAGCTACTTTTGAATGT+AGG | + | chr6.3:70433674-70433693 | MS.gene041701:intron | 30.0% |
| !!! | TGGTTCGGATTTTAAAACAT+CGG | + | chr6.3:70433108-70433127 | MS.gene041701:intron | 30.0% |
| !!! | TGGTTCGGTTTTTAAAACAT+TGG | + | chr6.3:70433059-70433078 | MS.gene041701:intron | 30.0% |
| !!! | TTAAGATTTTAGGACCTGTA+TGG | + | chr6.3:70435094-70435113 | MS.gene041701:intron | 30.0% |
| AACCTCACTCCAAAATTCTA+GGG | - | chr6.3:70433239-70433258 | None:intergenic | 35.0% | |
| AATGCGCAACTTTACCATTA+TGG | + | chr6.3:70435710-70435729 | MS.gene041701:CDS | 35.0% | |
| AGATGCATGGAATGTTGAAA+TGG | - | chr6.3:70434569-70434588 | None:intergenic | 35.0% | |
| CAAATTCCACTATGCTATAG+CGG | - | chr6.3:70433924-70433943 | None:intergenic | 35.0% | |
| CAAGTAGGTATTAAGATGCA+TGG | - | chr6.3:70434582-70434601 | None:intergenic | 35.0% | |
| CATATTTGCAGCATCTTCTT+TGG | - | chr6.3:70435443-70435462 | None:intergenic | 35.0% | |
| CATGCATCTTAATACCTACT+TGG | + | chr6.3:70434580-70434599 | MS.gene041701:intron | 35.0% | |
| CGTATACCATCACTAAACAA+AGG | + | chr6.3:70434167-70434186 | MS.gene041701:CDS | 35.0% | |
| GAAAAGAGGAAAAAAGTCTC+CGG | - | chr6.3:70433495-70433514 | None:intergenic | 35.0% | |
| GAAGATAATAGCAAGAGAAG+AGG | + | chr6.3:70435816-70435835 | MS.gene041701:CDS | 35.0% | |
| GTATATGAGACTAGAGACTA+GGG | + | chr6.3:70432665-70432684 | MS.gene041701:intron | 35.0% | |
| TAACCTCACTCCAAAATTCT+AGG | - | chr6.3:70433240-70433259 | None:intergenic | 35.0% | |
| TATATGAGACTAGAGACTAG+GGG | + | chr6.3:70432666-70432685 | MS.gene041701:intron | 35.0% | |
| TCAAACTCAAAAACATCGTC+AGG | + | chr6.3:70435924-70435943 | MS.gene041701:CDS | 35.0% | |
| TCAAGCAGTTTATCATACCA+TGG | - | chr6.3:70435036-70435055 | None:intergenic | 35.0% | |
| TCACTAAACAAAGGGAGAAA+TGG | + | chr6.3:70434176-70434195 | MS.gene041701:CDS | 35.0% | |
| TCCTTAAGAAATCTGGAAGA+GGG | + | chr6.3:70435956-70435975 | MS.gene041701:CDS | 35.0% | |
| TGAAATGGATGATCTTGAGA+AGG | + | chr6.3:70435570-70435589 | MS.gene041701:CDS | 35.0% | |
| TGAATGTAGGATCAAGTTCA+AGG | + | chr6.3:70433687-70433706 | MS.gene041701:intron | 35.0% | |
| TGTATATGAGACTAGAGACT+AGG | + | chr6.3:70432664-70432683 | MS.gene041701:intron | 35.0% | |
| TGTTCTGCATGAAGATTAAG+AGG | - | chr6.3:70434349-70434368 | None:intergenic | 35.0% | |
| TTCCTCGGAAGAAATAATCT+CGG | - | chr6.3:70435410-70435429 | None:intergenic | 35.0% | |
| TTTGGAAGATTGAGTTTCCT+CGG | - | chr6.3:70435425-70435444 | None:intergenic | 35.0% | |
| TTTGGTCGAACACTATCTAT+GGG | + | chr6.3:70435487-70435506 | MS.gene041701:CDS | 35.0% | |
| ! | AAAATTCTAGGGGACAAACA+AGG | - | chr6.3:70433228-70433247 | None:intergenic | 35.0% |
| ! | AATGGTTCAACTGCTTTGAA+AGG | + | chr6.3:70433017-70433036 | MS.gene041701:intron | 35.0% |
| ! | CCCTCTTTTACTATGAAAAG+AGG | - | chr6.3:70433509-70433528 | None:intergenic | 35.0% |
| ! | GGACTTTAAAGGAAAGGATT+TGG | + | chr6.3:70434502-70434521 | MS.gene041701:intron | 35.0% |
| ! | GGAGATGTTTCTGATTCATT+TGG | - | chr6.3:70434744-70434763 | None:intergenic | 35.0% |
| ! | TTGTTTGTCCCCTAGAATTT+TGG | + | chr6.3:70433227-70433246 | MS.gene041701:intron | 35.0% |
| ! | TTTCTCCCTTTGTTTAGTGA+TGG | - | chr6.3:70434176-70434195 | None:intergenic | 35.0% |
| !! | GAATAACGGATAACTGATGT+CGG | + | chr6.3:70432608-70432627 | MS.gene041701:intron | 35.0% |
| !!! | TGGTTCGGTTTTCAAAACAT+TGG | - | chr6.3:70432971-70432990 | None:intergenic | 35.0% |
| ACAGCACTGTAGTTGCATAA+CGG | + | chr6.3:70434010-70434029 | MS.gene041701:intron | 40.0% | |
| ACATGGAATCAGGTAGACTT+TGG | + | chr6.3:70432992-70433011 | MS.gene041701:intron | 40.0% | |
| ACCCTCTTCCAGATTTCTTA+AGG | - | chr6.3:70435960-70435979 | None:intergenic | 40.0% | |
| ACCTCACTCCAAAATTCTAG+GGG | - | chr6.3:70433238-70433257 | None:intergenic | 40.0% | |
| ACTCAAAAACATCGTCAGGA+AGG | + | chr6.3:70435928-70435947 | MS.gene041701:CDS | 40.0% | |
| ATCAGGTAGACTTTGGCTAA+TGG | + | chr6.3:70432999-70433018 | MS.gene041701:intron | 40.0% | |
| ATCTTCAAACAAGGCCTAAG+AGG | - | chr6.3:70435802-70435821 | None:intergenic | 40.0% | |
| ATGGATGATCTTGAGAAGGT+TGG | + | chr6.3:70435574-70435593 | MS.gene041701:CDS | 40.0% | |
| CAAAAGGGTGGTTCTTCAAT+TGG | - | chr6.3:70434091-70434110 | None:intergenic | 40.0% | |
| CACTGAATCAGTTTGCGATA+TGG | + | chr6.3:70435861-70435880 | MS.gene041701:CDS | 40.0% | |
| CATACAGTTTCAAAGCCTCA+AGG | - | chr6.3:70434225-70434244 | None:intergenic | 40.0% | |
| CCATTATGGAGTTTGTACCA+AGG | + | chr6.3:70435724-70435743 | MS.gene041701:CDS | 40.0% | |
| CCTTGGTACAAACTCCATAA+TGG | - | chr6.3:70435727-70435746 | None:intergenic | 40.0% | |
| CTATTTAACATGCTGCTGCT+TGG | + | chr6.3:70433425-70433444 | MS.gene041701:intron | 40.0% | |
| CTTAATACCTACTTGGTTGC+AGG | + | chr6.3:70434587-70434606 | MS.gene041701:intron | 40.0% | |
| GGAGTTGTCCTTAAGAAATC+TGG | + | chr6.3:70435949-70435968 | MS.gene041701:CDS | 40.0% | |
| GGTATGTCAATTGGCTGAAT+AGG | - | chr6.3:70434645-70434664 | None:intergenic | 40.0% | |
| GTCCTTAAGAAATCTGGAAG+AGG | + | chr6.3:70435955-70435974 | MS.gene041701:CDS | 40.0% | |
| GTGGAGGATTGAATGTAAGA+TGG | - | chr6.3:70433468-70433487 | None:intergenic | 40.0% | |
| GTTTGGTCGAACACTATCTA+TGG | + | chr6.3:70435486-70435505 | MS.gene041701:CDS | 40.0% | |
| TATCATACCATGGCCATAAG+TGG | - | chr6.3:70435026-70435045 | None:intergenic | 40.0% | |
| TATGTGAGATTTGATCGGGA+CGG | + | chr6.3:70433387-70433406 | MS.gene041701:intron | 40.0% | |
| TGAAAATGATGCTAAGTCGC+AGG | + | chr6.3:70433764-70433783 | MS.gene041701:CDS | 40.0% | |
| TGACTCTTTCAAAGGACAGT+TGG | + | chr6.3:70434716-70434735 | MS.gene041701:CDS | 40.0% | |
| TGCTGTAGTTCAGTTATAGC+CGG | - | chr6.3:70433996-70434015 | None:intergenic | 40.0% | |
| TGGATGATCTTGAGAAGGTT+GGG | + | chr6.3:70435575-70435594 | MS.gene041701:CDS | 40.0% | |
| TGTACTATCTGCACTTGGTT+CGG | + | chr6.3:70434812-70434831 | MS.gene041701:CDS | 40.0% | |
| TTCAGACTGTAATCCACCTT+TGG | - | chr6.3:70433748-70433767 | None:intergenic | 40.0% | |
| TTCTTAATCCTGTGCCTCTT+AGG | + | chr6.3:70435785-70435804 | MS.gene041701:CDS | 40.0% | |
| TTGTTATACAGTCGCTGTAG+CGG | + | chr6.3:70433870-70433889 | MS.gene041701:intron | 40.0% | |
| TTTGAAAACCGAACCAGACA+TGG | + | chr6.3:70432975-70432994 | MS.gene041701:intron | 40.0% | |
| ! | ACTGTAATCCACCTTTGGAA+TGG | - | chr6.3:70433743-70433762 | None:intergenic | 40.0% |
| ! | AGACTAGGGGAGTTTCTTTT+TGG | + | chr6.3:70432679-70432698 | MS.gene041701:intron | 40.0% |
| ! | AGAGCATCAAAAGTTCCTTG+AGG | + | chr6.3:70434207-70434226 | MS.gene041701:CDS | 40.0% |
| ! | ATCGCAAACTGATTCAGTGT+TGG | - | chr6.3:70435860-70435879 | None:intergenic | 40.0% |
| ! | GAACTTTTGATGCTCTTCGT+CGG | - | chr6.3:70434203-70434222 | None:intergenic | 40.0% |
| ! | TCGAATCTGAACTGCAGTTT+TGG | - | chr6.3:70434380-70434399 | None:intergenic | 40.0% |
| ! | TTTGATGATTGCATGGCATG+AGG | - | chr6.3:70435765-70435784 | None:intergenic | 40.0% |
| !! | AAAGAGTCAACTGATTTGCG+AGG | - | chr6.3:70434705-70434724 | None:intergenic | 40.0% |
| !! | AAGAGTCAACTGATTTGCGA+GGG | - | chr6.3:70434704-70434723 | None:intergenic | 40.0% |
| !! | CTTGAGGCTTTGAAACTGTA+TGG | + | chr6.3:70434223-70434242 | MS.gene041701:CDS | 40.0% |
| AAACAGCCGCTATAGCATAG+TGG | + | chr6.3:70433915-70433934 | MS.gene041701:intron | 45.0% | |
| ACCAAGTGCAGATAGTACAG+AGG | - | chr6.3:70434811-70434830 | None:intergenic | 45.0% | |
| ACCTCTGTACTATCTGCACT+TGG | + | chr6.3:70434807-70434826 | MS.gene041701:CDS | 45.0% | |
| ACCTGATTCCATGTCTGGTT+CGG | - | chr6.3:70432986-70433005 | None:intergenic | 45.0% | |
| AGCGTATTGCAGAACAGCAT+CGG | - | chr6.3:70433949-70433968 | None:intergenic | 45.0% | |
| AGTCTACCTGATTCCATGTC+TGG | - | chr6.3:70432991-70433010 | None:intergenic | 45.0% | |
| AGTGCAGATAGTACAGAGGT+TGG | - | chr6.3:70434807-70434826 | None:intergenic | 45.0% | |
| ATCTCGGTGGTGCAAGAATT+AGG | - | chr6.3:70434888-70434907 | None:intergenic | 45.0% | |
| CAATTGACATACCTCCTCCT+CGG | + | chr6.3:70434652-70434671 | MS.gene041701:CDS | 45.0% | |
| CATTCAATCCTCCACTCTTC+CGG | + | chr6.3:70433473-70433492 | MS.gene041701:intron | 45.0% | |
| CCGAAGGAGAATCCATATGT+CGG | + | chr6.3:70435685-70435704 | MS.gene041701:CDS | 45.0% | |
| CCGACATATGGATTCTCCTT+CGG | - | chr6.3:70435688-70435707 | None:intergenic | 45.0% | |
| CTCAAAACCACTTATGGCCA+TGG | + | chr6.3:70435016-70435035 | MS.gene041701:CDS | 45.0% | |
| CTCTGCAACTGACAGGTTAA+TGG | - | chr6.3:70434769-70434788 | None:intergenic | 45.0% | |
| GAAAAAAGTCTCCGGAAGAG+TGG | - | chr6.3:70433487-70433506 | None:intergenic | 45.0% | |
| GCAACTGACAGGTTAATGGA+TGG | - | chr6.3:70434765-70434784 | None:intergenic | 45.0% | |
| GGGTTCTCAGAAGTCAATGA+AGG | + | chr6.3:70435507-70435526 | MS.gene041701:CDS | 45.0% | |
| GTAAAACAACCTTGGGAGCA+AGG | - | chr6.3:70433812-70433831 | None:intergenic | 45.0% | |
| TAGCAGATCGCGGAAAATAG+CGG | - | chr6.3:70434048-70434067 | None:intergenic | 45.0% | |
| TCGCAGGATATACCTTCTGT+CGG | + | chr6.3:70433780-70433799 | MS.gene041701:CDS | 45.0% | |
| TGAGAAGGTTGGGCAAAAAG+AGG | + | chr6.3:70435585-70435604 | MS.gene041701:CDS | 45.0% | |
| TGTCATTCTCTGCAACTGAC+AGG | - | chr6.3:70434776-70434795 | None:intergenic | 45.0% | |
| ! | AGTAAGTGCCATTCCAAAGG+TGG | + | chr6.3:70433732-70433751 | MS.gene041701:CDS | 45.0% |
| ! | ATTTGCGAGGGTATGGATGA+AGG | - | chr6.3:70434692-70434711 | None:intergenic | 45.0% |
| ! | GCAAAGCGCTTGCCTAAATA+AGG | + | chr6.3:70433169-70433188 | MS.gene041701:intron | 45.0% |
| ! | GCTAGTAAGTGCCATTCCAA+AGG | + | chr6.3:70433729-70433748 | MS.gene041701:CDS | 45.0% |
| ! | GTCCGAGATTATTTCTTCCG+AGG | + | chr6.3:70435405-70435424 | MS.gene041701:CDS | 45.0% |
| ! | GTTCAAGGCACTAAGTCAAC+TGG | + | chr6.3:70433702-70433721 | MS.gene041701:CDS | 45.0% |
| ! | TTTGCGAGGGTATGGATGAA+GGG | - | chr6.3:70434691-70434710 | None:intergenic | 45.0% |
| !! | CACCGACTCAAAACCACTTA+TGG | + | chr6.3:70435010-70435029 | MS.gene041701:CDS | 45.0% |
| !! | GCTTTGAAACTGTATGGTCG+TGG | + | chr6.3:70434229-70434248 | MS.gene041701:CDS | 45.0% |
| !! | TCAACTGATTTGCGAGGGTA+TGG | - | chr6.3:70434699-70434718 | None:intergenic | 45.0% |
| !!! | CACTGTTTTGGCAGAGCTTA+TGG | + | chr6.3:70435159-70435178 | MS.gene041701:intron | 45.0% |
| !!! | CATAAGTGGTTTTGAGTCGG+TGG | - | chr6.3:70435012-70435031 | None:intergenic | 45.0% |
| !!! | GGCCATAAGTGGTTTTGAGT+CGG | - | chr6.3:70435015-70435034 | None:intergenic | 45.0% |
| !!! | GGTTTTGAGTCGGTGGATAA+AGG | - | chr6.3:70435005-70435024 | None:intergenic | 45.0% |
| !!! | TCCCCTAGAATTTTGGAGTG+AGG | + | chr6.3:70433234-70433253 | MS.gene041701:intron | 45.0% |
| !! | TAAAATTTATTTACTAAATT+TGG | + | chr6.3:70434270-70434289 | MS.gene041701:intron | 5.0% |
| AAAAGTCTCCGGAAGAGTGG+AGG | - | chr6.3:70433484-70433503 | None:intergenic | 50.0% | |
| ACCGAACCAGACATGGAATC+AGG | + | chr6.3:70432982-70433001 | MS.gene041701:intron | 50.0% | |
| CCAGACATCCAAACCATCTG+AGG | + | chr6.3:70434950-70434969 | MS.gene041701:CDS | 50.0% | |
| CCATCTGAGGAGGAAGAGAA+AGG | + | chr6.3:70434963-70434982 | MS.gene041701:CDS | 50.0% | |
| CCTTTCTCTTCCTCCTCAGA+TGG | - | chr6.3:70434966-70434985 | None:intergenic | 50.0% | |
| CTACTTGGTTGCAGGTTGTG+CGG | + | chr6.3:70434595-70434614 | MS.gene041701:intron | 50.0% | |
| CTAGGCATGTGTACACCTGA+TGG | + | chr6.3:70435637-70435656 | MS.gene041701:CDS | 50.0% | |
| CTCTTCCTCCTCAGATGGTT+TGG | - | chr6.3:70434961-70434980 | None:intergenic | 50.0% | |
| GAAGAGGAAAGCTCTTGCAC+TGG | + | chr6.3:70435832-70435851 | MS.gene041701:CDS | 50.0% | |
| GACATCCAAACCATCTGAGG+AGG | + | chr6.3:70434953-70434972 | MS.gene041701:CDS | 50.0% | |
| GATGATTGCATGGCATGAGG+TGG | - | chr6.3:70435762-70435781 | None:intergenic | 50.0% | |
| GGATGAAGGGGTTTCCTCTT+CGG | - | chr6.3:70434678-70434697 | None:intergenic | 50.0% | |
| TACTTGGTTGCAGGTTGTGC+GGG | + | chr6.3:70434596-70434615 | MS.gene041701:intron | 50.0% | |
| TCAACAGGTGACAAGCTGAC+CGG | - | chr6.3:70434915-70434934 | None:intergenic | 50.0% | |
| TCGGGACGGCAATTAAGCTT+AGG | + | chr6.3:70433401-70433420 | MS.gene041701:intron | 50.0% | |
| TGAAACTGTATGGTCGTGGC+TGG | + | chr6.3:70434233-70434252 | MS.gene041701:CDS | 50.0% | |
| ! | AAACAAGGCCTAAGAGGCAC+AGG | - | chr6.3:70435796-70435815 | None:intergenic | 50.0% |
| ! | CCTCAGATGGTTTGGATGTC+TGG | - | chr6.3:70434953-70434972 | None:intergenic | 50.0% |
| ! | CGAGGAGGAGGTATGTCAAT+TGG | - | chr6.3:70434654-70434673 | None:intergenic | 50.0% |
| ! | GCAAGGTTGTTTCCGACAGA+AGG | - | chr6.3:70433795-70433814 | None:intergenic | 50.0% |
| ! | GTGTTGGCAATAGCAGATCG+CGG | - | chr6.3:70434058-70434077 | None:intergenic | 50.0% |
| ! | TTGCGAGGGTATGGATGAAG+GGG | - | chr6.3:70434690-70434709 | None:intergenic | 50.0% |
| !! | GCACTTGGTTCGGAAGCATT+CGG | + | chr6.3:70434822-70434841 | MS.gene041701:CDS | 50.0% |
| !! | GCTGGCTTGGAAGAAAGAGA+GGG | + | chr6.3:70436030-70436049 | MS.gene041701:CDS | 50.0% |
| !! | TGCTGGCTTGGAAGAAAGAG+AGG | + | chr6.3:70436029-70436048 | MS.gene041701:CDS | 50.0% |
| CAACAGGTGACAAGCTGACC+GGG | - | chr6.3:70434914-70434933 | None:intergenic | 55.0% | |
| CAAGCTGACCGGGTGAATCT+CGG | - | chr6.3:70434904-70434923 | None:intergenic | 55.0% | |
| CATGGCATGAGGTGGAAAGC+TGG | - | chr6.3:70435754-70435773 | None:intergenic | 55.0% | |
| CGCACAACCTGCAACCAAGT+AGG | - | chr6.3:70434597-70434616 | None:intergenic | 55.0% | |
| CGGAAACAACCTTGCTCCCA+AGG | + | chr6.3:70433800-70433819 | MS.gene041701:CDS | 55.0% | |
| CGTGGCTGGCGTCAAATTGA+AGG | + | chr6.3:70434247-70434266 | MS.gene041701:CDS | 55.0% | |
| CTGCTCACTTGAGCTCCATC+AGG | - | chr6.3:70435655-70435674 | None:intergenic | 55.0% | |
| GAGCAGCATGGAACAACCGA+AGG | + | chr6.3:70435669-70435688 | MS.gene041701:CDS | 55.0% | |
| GCATGAGGTGGAAAGCTGGA+AGG | - | chr6.3:70435750-70435769 | None:intergenic | 55.0% | |
| GGACTTTCAGCACTGCCATC+AGG | - | chr6.3:70434624-70434643 | None:intergenic | 55.0% | |
| GTTGCGCATTCGCCGACATA+TGG | - | chr6.3:70435700-70435719 | None:intergenic | 55.0% | |
| TGGAGCTCAAGTGAGCAGCA+TGG | + | chr6.3:70435657-70435676 | MS.gene041701:CDS | 55.0% | |
| TTGCACCACCGAGATTCACC+CGG | + | chr6.3:70434893-70434912 | MS.gene041701:CDS | 55.0% | |
| ! | GCTGCTGCTTGGTATGAAGC+AGG | + | chr6.3:70433436-70433455 | MS.gene041701:intron | 55.0% |
| CAGGTTGTGCGGGAACCTGA+TGG | + | chr6.3:70434606-70434625 | MS.gene041701:intron | 60.0% | |
| GGTGGAAAGCTGGAAGGCCT+TGG | - | chr6.3:70435744-70435763 | None:intergenic | 60.0% | |
| AGGGGTTTCCTCTTCGGCCG+AGG | - | chr6.3:70434672-70434691 | None:intergenic | 65.0% | |
| GCTGACCGGGTGAATCTCGG+TGG | - | chr6.3:70434901-70434920 | None:intergenic | 65.0% | |
| GGTTTCCTCTTCGGCCGAGG+AGG | - | chr6.3:70434669-70434688 | None:intergenic | 65.0% | |
| TACCTCCTCCTCGGCCGAAG+AGG | + | chr6.3:70434661-70434680 | MS.gene041701:CDS | 65.0% | |
| TTCCTCTTCGGCCGAGGAGG+AGG | - | chr6.3:70434666-70434685 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 70432391 | 70436077 | 70432391 | ID=MS.gene041701 |
| chr6.3 | mRNA | 70432391 | 70436077 | 70432391 | ID=MS.gene041701.t1;Parent=MS.gene041701 |
| chr6.3 | exon | 70432391 | 70432402 | 70432391 | ID=MS.gene041701.t1.exon1;Parent=MS.gene041701.t1 |
| chr6.3 | CDS | 70432391 | 70432402 | 70432391 | ID=cds.MS.gene041701.t1;Parent=MS.gene041701.t1 |
| chr6.3 | exon | 70433696 | 70433821 | 70433696 | ID=MS.gene041701.t1.exon2;Parent=MS.gene041701.t1 |
| chr6.3 | CDS | 70433696 | 70433821 | 70433696 | ID=cds.MS.gene041701.t1;Parent=MS.gene041701.t1 |
| chr6.3 | exon | 70434157 | 70434268 | 70434157 | ID=MS.gene041701.t1.exon3;Parent=MS.gene041701.t1 |
| chr6.3 | CDS | 70434157 | 70434268 | 70434157 | ID=cds.MS.gene041701.t1;Parent=MS.gene041701.t1 |
| chr6.3 | exon | 70434365 | 70434426 | 70434365 | ID=MS.gene041701.t1.exon4;Parent=MS.gene041701.t1 |
| chr6.3 | CDS | 70434365 | 70434426 | 70434365 | ID=cds.MS.gene041701.t1;Parent=MS.gene041701.t1 |
| chr6.3 | exon | 70434609 | 70435037 | 70434609 | ID=MS.gene041701.t1.exon5;Parent=MS.gene041701.t1 |
| chr6.3 | CDS | 70434609 | 70435037 | 70434609 | ID=cds.MS.gene041701.t1;Parent=MS.gene041701.t1 |
| chr6.3 | exon | 70435403 | 70436077 | 70435403 | ID=MS.gene041701.t1.exon6;Parent=MS.gene041701.t1 |
| chr6.3 | CDS | 70435403 | 70436077 | 70435403 | ID=cds.MS.gene041701.t1;Parent=MS.gene041701.t1 |
| Gene Sequence |
| Protein sequence |
