Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041703.t1 | XP_013452823.1 | 98.7 | 159 | 2 | 0 | 4 | 162 | 61 | 219 | 2.00E-90 | 342.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041703.t1 | A4VCM0 | 61.0 | 136 | 41 | 2 | 4 | 127 | 61 | 196 | 4.7e-40 | 166.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041703.t1 | A0A072UBN5 | 98.7 | 159 | 2 | 0 | 4 | 162 | 61 | 219 | 1.4e-90 | 342.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene041703.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041703.t1 | MTR_6g477900 | 98.742 | 159 | 2 | 0 | 4 | 162 | 61 | 219 | 1.21e-117 | 337 |
MS.gene041703.t1 | MTR_3g064580 | 72.549 | 102 | 27 | 1 | 4 | 104 | 61 | 162 | 2.08e-49 | 173 |
MS.gene041703.t1 | MTR_5g076850 | 73.000 | 100 | 27 | 0 | 4 | 103 | 61 | 160 | 5.10e-48 | 169 |
MS.gene041703.t1 | MTR_2g064090 | 67.347 | 98 | 31 | 1 | 4 | 100 | 61 | 158 | 2.69e-43 | 151 |
MS.gene041703.t1 | MTR_3g093050 | 38.431 | 255 | 126 | 7 | 4 | 254 | 77 | 304 | 7.92e-41 | 149 |
MS.gene041703.t1 | MTR_3g093050 | 38.039 | 255 | 127 | 6 | 4 | 254 | 77 | 304 | 1.16e-40 | 149 |
MS.gene041703.t1 | MTR_5g014300 | 59.483 | 116 | 37 | 2 | 4 | 112 | 61 | 173 | 5.79e-39 | 139 |
MS.gene041703.t1 | MTR_4g081870 | 39.080 | 174 | 98 | 4 | 6 | 175 | 64 | 233 | 1.21e-37 | 134 |
MS.gene041703.t1 | MTR_3g093040 | 45.860 | 157 | 77 | 2 | 4 | 160 | 163 | 311 | 4.60e-37 | 134 |
MS.gene041703.t1 | MTR_5g069030 | 63.542 | 96 | 35 | 0 | 4 | 99 | 80 | 175 | 1.49e-36 | 137 |
MS.gene041703.t1 | MTR_3g096140 | 43.421 | 152 | 77 | 2 | 4 | 148 | 62 | 211 | 2.20e-36 | 131 |
MS.gene041703.t1 | MTR_5g041940 | 47.328 | 131 | 64 | 2 | 6 | 132 | 58 | 187 | 3.16e-36 | 130 |
MS.gene041703.t1 | MTR_6g084430 | 47.887 | 142 | 66 | 4 | 6 | 143 | 60 | 197 | 4.40e-36 | 132 |
MS.gene041703.t1 | MTR_1g097300 | 58.333 | 108 | 45 | 0 | 4 | 111 | 74 | 181 | 5.84e-36 | 135 |
MS.gene041703.t1 | MTR_8g063550 | 54.128 | 109 | 50 | 0 | 4 | 112 | 61 | 169 | 1.01e-35 | 131 |
MS.gene041703.t1 | MTR_3g096140 | 43.421 | 152 | 77 | 2 | 4 | 148 | 41 | 190 | 1.40e-35 | 130 |
MS.gene041703.t1 | MTR_3g096140 | 43.421 | 152 | 77 | 2 | 4 | 148 | 62 | 211 | 1.59e-35 | 131 |
MS.gene041703.t1 | MTR_8g063550 | 54.128 | 109 | 50 | 0 | 4 | 112 | 61 | 169 | 1.92e-35 | 132 |
MS.gene041703.t1 | MTR_8g063550 | 54.128 | 109 | 50 | 0 | 4 | 112 | 61 | 169 | 1.97e-35 | 132 |
MS.gene041703.t1 | MTR_3g109340 | 59.184 | 98 | 37 | 2 | 6 | 101 | 77 | 173 | 4.55e-34 | 127 |
MS.gene041703.t1 | MTR_0036s0150 | 56.481 | 108 | 46 | 1 | 4 | 111 | 61 | 167 | 8.64e-34 | 129 |
MS.gene041703.t1 | MTR_1g090723 | 55.556 | 108 | 47 | 1 | 4 | 111 | 64 | 170 | 1.14e-33 | 129 |
MS.gene041703.t1 | MTR_2g062730 | 60.417 | 96 | 33 | 3 | 6 | 99 | 68 | 160 | 1.15e-33 | 125 |
MS.gene041703.t1 | MTR_1g090723 | 55.556 | 108 | 47 | 1 | 4 | 111 | 64 | 170 | 1.49e-33 | 129 |
MS.gene041703.t1 | MTR_8g059170 | 54.639 | 97 | 42 | 1 | 6 | 100 | 69 | 165 | 1.60e-33 | 125 |
MS.gene041703.t1 | MTR_4g036030 | 50.000 | 110 | 51 | 2 | 6 | 113 | 65 | 172 | 2.42e-33 | 125 |
MS.gene041703.t1 | MTR_4g035590 | 56.701 | 97 | 39 | 1 | 6 | 102 | 66 | 159 | 3.41e-33 | 124 |
MS.gene041703.t1 | MTR_2g079990 | 53.684 | 95 | 44 | 0 | 6 | 100 | 71 | 165 | 3.55e-33 | 124 |
MS.gene041703.t1 | MTR_4g108760 | 56.701 | 97 | 40 | 1 | 6 | 100 | 72 | 168 | 6.39e-33 | 124 |
MS.gene041703.t1 | MTR_6g012670 | 54.717 | 106 | 46 | 1 | 6 | 109 | 75 | 180 | 6.49e-33 | 123 |
MS.gene041703.t1 | MTR_3g109340 | 57.143 | 98 | 38 | 2 | 6 | 101 | 77 | 172 | 6.49e-33 | 124 |
MS.gene041703.t1 | MTR_8g076110 | 46.281 | 121 | 63 | 1 | 6 | 126 | 64 | 182 | 6.96e-33 | 123 |
MS.gene041703.t1 | MTR_1g096430 | 56.383 | 94 | 39 | 1 | 6 | 99 | 65 | 156 | 1.07e-32 | 123 |
MS.gene041703.t1 | MTR_8g024480 | 45.690 | 116 | 54 | 1 | 6 | 112 | 73 | 188 | 1.36e-32 | 124 |
MS.gene041703.t1 | MTR_8g093580 | 50.459 | 109 | 54 | 0 | 4 | 112 | 61 | 169 | 1.71e-32 | 125 |
MS.gene041703.t1 | MTR_7g085220 | 42.857 | 133 | 52 | 3 | 6 | 125 | 63 | 184 | 1.84e-32 | 122 |
MS.gene041703.t1 | MTR_4g098630 | 58.000 | 100 | 39 | 1 | 4 | 100 | 61 | 160 | 2.63e-32 | 121 |
MS.gene041703.t1 | MTR_3g435150 | 56.701 | 97 | 40 | 1 | 6 | 100 | 71 | 167 | 3.18e-32 | 121 |
MS.gene041703.t1 | MTR_1g090723 | 52.778 | 108 | 51 | 0 | 4 | 111 | 64 | 171 | 3.81e-32 | 125 |
MS.gene041703.t1 | MTR_1g008740 | 58.333 | 96 | 37 | 2 | 6 | 99 | 69 | 163 | 3.92e-32 | 122 |
MS.gene041703.t1 | MTR_1g008740 | 58.333 | 96 | 37 | 2 | 6 | 99 | 83 | 177 | 4.12e-32 | 122 |
MS.gene041703.t1 | MTR_3g088110 | 44.444 | 135 | 63 | 4 | 6 | 137 | 62 | 187 | 4.77e-32 | 120 |
MS.gene041703.t1 | MTR_8g094580 | 53.000 | 100 | 42 | 3 | 6 | 101 | 8 | 106 | 5.95e-32 | 118 |
MS.gene041703.t1 | MTR_6g032770 | 54.455 | 101 | 42 | 2 | 6 | 102 | 73 | 173 | 1.17e-31 | 121 |
MS.gene041703.t1 | MTR_7g085260 | 48.760 | 121 | 53 | 3 | 6 | 120 | 72 | 189 | 1.23e-31 | 121 |
MS.gene041703.t1 | MTR_3g096920 | 52.525 | 99 | 43 | 2 | 6 | 101 | 62 | 159 | 1.68e-31 | 119 |
MS.gene041703.t1 | MTR_2g078700 | 57.576 | 99 | 38 | 2 | 6 | 100 | 78 | 176 | 1.85e-31 | 120 |
MS.gene041703.t1 | MTR_8g094580 | 53.000 | 100 | 42 | 3 | 6 | 101 | 62 | 160 | 1.86e-31 | 118 |
MS.gene041703.t1 | MTR_4g101680 | 51.064 | 94 | 44 | 1 | 6 | 99 | 65 | 156 | 1.96e-31 | 120 |
MS.gene041703.t1 | MTR_2g093810 | 48.649 | 111 | 51 | 2 | 6 | 110 | 69 | 179 | 2.16e-31 | 119 |
MS.gene041703.t1 | MTR_2g064470 | 48.624 | 109 | 55 | 1 | 6 | 113 | 64 | 172 | 2.16e-31 | 119 |
MS.gene041703.t1 | MTR_1g069805 | 39.744 | 156 | 86 | 3 | 6 | 157 | 65 | 216 | 2.35e-31 | 118 |
MS.gene041703.t1 | MTR_2157s0010 | 47.368 | 114 | 46 | 3 | 1 | 101 | 58 | 170 | 3.28e-31 | 117 |
MS.gene041703.t1 | MTR_5g021710 | 54.255 | 94 | 41 | 1 | 6 | 99 | 66 | 157 | 3.93e-31 | 119 |
MS.gene041703.t1 | MTR_4g134460 | 54.902 | 102 | 43 | 2 | 2 | 102 | 105 | 204 | 4.81e-31 | 120 |
MS.gene041703.t1 | MTR_3g070030 | 45.000 | 140 | 70 | 3 | 4 | 140 | 72 | 207 | 1.44e-30 | 117 |
MS.gene041703.t1 | MTR_7g100990 | 41.026 | 156 | 73 | 5 | 6 | 143 | 66 | 220 | 1.49e-30 | 117 |
MS.gene041703.t1 | MTR_2g080010 | 45.528 | 123 | 54 | 2 | 6 | 115 | 70 | 192 | 1.87e-30 | 117 |
MS.gene041703.t1 | MTR_3g116070 | 43.709 | 151 | 59 | 5 | 6 | 149 | 79 | 210 | 2.61e-30 | 117 |
MS.gene041703.t1 | MTR_7g097090 | 56.383 | 94 | 35 | 2 | 6 | 97 | 65 | 154 | 3.57e-30 | 115 |
MS.gene041703.t1 | MTR_7g011130 | 37.097 | 186 | 96 | 5 | 6 | 187 | 74 | 242 | 7.41e-30 | 115 |
MS.gene041703.t1 | MTR_5g012080 | 52.632 | 95 | 43 | 2 | 6 | 99 | 65 | 158 | 7.43e-30 | 115 |
MS.gene041703.t1 | MTR_6g011860 | 43.651 | 126 | 61 | 2 | 6 | 121 | 70 | 195 | 9.56e-29 | 113 |
MS.gene041703.t1 | MTR_2g079990 | 51.087 | 92 | 44 | 1 | 6 | 97 | 71 | 161 | 1.07e-28 | 113 |
MS.gene041703.t1 | MTR_7g005280 | 51.515 | 99 | 44 | 2 | 3 | 99 | 64 | 160 | 1.18e-28 | 110 |
MS.gene041703.t1 | MTR_4g075980 | 46.364 | 110 | 51 | 2 | 6 | 112 | 70 | 174 | 1.64e-28 | 111 |
MS.gene041703.t1 | MTR_8g467490 | 40.741 | 135 | 68 | 3 | 6 | 128 | 69 | 203 | 2.09e-28 | 112 |
MS.gene041703.t1 | MTR_3g096920 | 51.648 | 91 | 41 | 2 | 6 | 96 | 62 | 149 | 5.22e-28 | 110 |
MS.gene041703.t1 | MTR_7g011120 | 51.429 | 105 | 42 | 1 | 4 | 99 | 61 | 165 | 6.95e-28 | 109 |
MS.gene041703.t1 | MTR_1g090720 | 55.238 | 105 | 41 | 1 | 4 | 102 | 97 | 201 | 1.04e-27 | 112 |
MS.gene041703.t1 | MTR_4g089135 | 60.274 | 73 | 27 | 1 | 6 | 76 | 70 | 142 | 2.88e-27 | 108 |
MS.gene041703.t1 | MTR_5g040420 | 49.038 | 104 | 43 | 2 | 6 | 99 | 69 | 172 | 3.28e-27 | 109 |
MS.gene041703.t1 | MTR_3g070040 | 54.444 | 90 | 37 | 1 | 14 | 99 | 68 | 157 | 1.66e-26 | 106 |
MS.gene041703.t1 | MTR_2g086880 | 50.515 | 97 | 40 | 2 | 4 | 100 | 72 | 160 | 2.21e-26 | 108 |
MS.gene041703.t1 | MTR_2g086880 | 50.515 | 97 | 40 | 2 | 4 | 100 | 72 | 160 | 3.04e-26 | 107 |
MS.gene041703.t1 | MTR_8g023840 | 50.526 | 95 | 39 | 4 | 4 | 96 | 67 | 155 | 3.30e-22 | 95.5 |
MS.gene041703.t1 | MTR_2g086690 | 32.597 | 181 | 108 | 6 | 6 | 178 | 65 | 239 | 4.77e-22 | 92.8 |
MS.gene041703.t1 | MTR_2g068880 | 43.636 | 110 | 47 | 2 | 6 | 100 | 78 | 187 | 6.51e-22 | 93.6 |
MS.gene041703.t1 | MTR_7g070140 | 50.649 | 77 | 36 | 2 | 3 | 77 | 16 | 92 | 6.59e-22 | 89.4 |
MS.gene041703.t1 | MTR_5g090970 | 46.226 | 106 | 45 | 3 | 6 | 99 | 72 | 177 | 7.00e-22 | 93.6 |
MS.gene041703.t1 | MTR_8g023860 | 49.474 | 95 | 40 | 4 | 4 | 96 | 68 | 156 | 7.10e-22 | 94.7 |
MS.gene041703.t1 | MTR_5g090970 | 46.226 | 106 | 45 | 3 | 6 | 99 | 73 | 178 | 7.24e-22 | 93.6 |
MS.gene041703.t1 | MTR_8g099750 | 42.453 | 106 | 52 | 3 | 6 | 102 | 67 | 172 | 4.43e-21 | 89.7 |
MS.gene041703.t1 | MTR_7g105170 | 43.564 | 101 | 51 | 3 | 6 | 100 | 65 | 165 | 1.32e-20 | 89.0 |
MS.gene041703.t1 | MTR_2g068920 | 41.818 | 110 | 49 | 2 | 6 | 100 | 77 | 186 | 4.08e-20 | 88.2 |
MS.gene041703.t1 | MTR_4g052620 | 42.000 | 100 | 54 | 2 | 6 | 101 | 65 | 164 | 1.06e-19 | 86.7 |
MS.gene041703.t1 | MTR_8g023900 | 32.941 | 170 | 94 | 6 | 4 | 161 | 249 | 410 | 1.23e-18 | 85.9 |
MS.gene041703.t1 | MTR_8g023900 | 42.857 | 112 | 58 | 4 | 4 | 113 | 68 | 175 | 1.16e-17 | 83.2 |
MS.gene041703.t1 | MTR_8g023930 | 34.118 | 170 | 91 | 7 | 4 | 161 | 80 | 240 | 7.43e-18 | 83.6 |
MS.gene041703.t1 | MTR_3g098810 | 41.176 | 102 | 50 | 2 | 8 | 99 | 69 | 170 | 1.70e-17 | 80.1 |
MS.gene041703.t1 | MTR_3g098810 | 47.945 | 73 | 34 | 1 | 8 | 76 | 69 | 141 | 3.25e-16 | 75.1 |
MS.gene041703.t1 | MTR_7g070150 | 51.923 | 52 | 22 | 1 | 48 | 99 | 9 | 57 | 1.11e-12 | 63.2 |
MS.gene041703.t1 | MTR_8g023880 | 32.500 | 160 | 76 | 7 | 4 | 147 | 63 | 206 | 8.46e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041703.t1 | AT3G17730 | 70.349 | 172 | 38 | 4 | 4 | 163 | 61 | 231 | 2.94e-81 | 245 |
MS.gene041703.t1 | AT1G65910 | 50.282 | 177 | 69 | 3 | 4 | 161 | 61 | 237 | 1.84e-52 | 181 |
MS.gene041703.t1 | AT5G17260 | 51.685 | 178 | 58 | 6 | 4 | 160 | 61 | 231 | 4.84e-49 | 169 |
MS.gene041703.t1 | AT3G03200 | 77.320 | 97 | 21 | 1 | 4 | 99 | 61 | 157 | 1.47e-48 | 168 |
MS.gene041703.t1 | AT4G35580 | 59.813 | 107 | 38 | 1 | 4 | 105 | 64 | 170 | 2.02e-38 | 142 |
MS.gene041703.t1 | AT4G35580 | 59.813 | 107 | 38 | 1 | 4 | 105 | 64 | 170 | 2.03e-38 | 141 |
MS.gene041703.t1 | AT4G35580 | 59.813 | 107 | 38 | 1 | 4 | 105 | 64 | 170 | 2.21e-38 | 142 |
MS.gene041703.t1 | AT1G69490 | 45.522 | 134 | 69 | 2 | 6 | 135 | 64 | 197 | 3.59e-38 | 135 |
MS.gene041703.t1 | AT1G54330 | 68.041 | 97 | 28 | 1 | 4 | 100 | 61 | 154 | 5.34e-38 | 136 |
MS.gene041703.t1 | AT1G33060 | 62.500 | 96 | 36 | 0 | 4 | 99 | 79 | 174 | 6.98e-37 | 139 |
MS.gene041703.t1 | AT1G33060 | 62.500 | 96 | 36 | 0 | 4 | 99 | 79 | 174 | 7.42e-37 | 139 |
MS.gene041703.t1 | AT3G10480 | 61.616 | 99 | 38 | 0 | 4 | 102 | 82 | 180 | 1.10e-36 | 135 |
MS.gene041703.t1 | AT3G12977 | 51.818 | 110 | 52 | 1 | 6 | 114 | 20 | 129 | 2.99e-36 | 129 |
MS.gene041703.t1 | AT5G04410 | 56.481 | 108 | 47 | 0 | 4 | 111 | 64 | 171 | 3.45e-36 | 136 |
MS.gene041703.t1 | AT3G10480 | 62.000 | 100 | 37 | 1 | 4 | 102 | 82 | 181 | 4.72e-36 | 134 |
MS.gene041703.t1 | AT3G10480 | 62.000 | 100 | 37 | 1 | 4 | 102 | 115 | 214 | 1.19e-35 | 134 |
MS.gene041703.t1 | AT3G10500 | 57.798 | 109 | 44 | 2 | 4 | 111 | 64 | 171 | 1.34e-35 | 134 |
MS.gene041703.t1 | AT5G39610 | 58.163 | 98 | 39 | 1 | 6 | 101 | 75 | 172 | 1.55e-35 | 129 |
MS.gene041703.t1 | AT5G46590 | 52.033 | 123 | 50 | 3 | 4 | 124 | 61 | 176 | 1.59e-35 | 129 |
MS.gene041703.t1 | AT3G10490 | 61.000 | 100 | 38 | 1 | 4 | 102 | 82 | 181 | 1.79e-35 | 128 |
MS.gene041703.t1 | AT3G12977 | 51.818 | 110 | 52 | 1 | 6 | 114 | 73 | 182 | 2.71e-35 | 128 |
MS.gene041703.t1 | AT1G34190 | 54.630 | 108 | 49 | 0 | 4 | 111 | 71 | 178 | 4.57e-35 | 133 |
MS.gene041703.t1 | AT5G61430 | 58.163 | 98 | 39 | 1 | 6 | 101 | 8 | 105 | 8.36e-35 | 127 |
MS.gene041703.t1 | AT1G34180 | 52.778 | 108 | 51 | 0 | 4 | 111 | 71 | 178 | 8.48e-35 | 130 |
MS.gene041703.t1 | AT4G17980 | 58.416 | 101 | 38 | 2 | 4 | 100 | 61 | 161 | 9.23e-35 | 126 |
MS.gene041703.t1 | AT3G10490 | 61.000 | 100 | 38 | 1 | 4 | 102 | 82 | 181 | 9.33e-35 | 130 |
MS.gene041703.t1 | AT1G34180 | 52.778 | 108 | 51 | 0 | 4 | 111 | 83 | 190 | 9.86e-35 | 130 |
MS.gene041703.t1 | AT5G07680 | 57.843 | 102 | 41 | 1 | 2 | 101 | 54 | 155 | 1.03e-34 | 128 |
MS.gene041703.t1 | AT5G07680 | 57.843 | 102 | 41 | 1 | 2 | 101 | 68 | 169 | 1.26e-34 | 128 |
MS.gene041703.t1 | AT3G18400 | 57.895 | 95 | 39 | 1 | 6 | 100 | 60 | 153 | 1.42e-34 | 127 |
MS.gene041703.t1 | AT4G17980 | 58.416 | 101 | 38 | 2 | 4 | 100 | 61 | 161 | 2.11e-34 | 126 |
MS.gene041703.t1 | AT1G34180 | 52.778 | 108 | 51 | 0 | 4 | 111 | 71 | 178 | 2.11e-34 | 131 |
MS.gene041703.t1 | AT2G24430 | 62.500 | 96 | 33 | 2 | 6 | 99 | 71 | 165 | 2.30e-34 | 127 |
MS.gene041703.t1 | AT2G24430 | 62.500 | 96 | 33 | 2 | 6 | 99 | 71 | 165 | 2.30e-34 | 127 |
MS.gene041703.t1 | AT1G34180 | 52.778 | 108 | 51 | 0 | 4 | 111 | 83 | 190 | 2.31e-34 | 131 |
MS.gene041703.t1 | AT5G61430 | 58.163 | 98 | 39 | 1 | 6 | 101 | 71 | 168 | 3.41e-34 | 127 |
MS.gene041703.t1 | AT1G71930 | 46.099 | 141 | 68 | 4 | 6 | 143 | 67 | 202 | 3.91e-34 | 126 |
MS.gene041703.t1 | AT1G71930 | 46.099 | 141 | 68 | 4 | 6 | 143 | 67 | 202 | 3.91e-34 | 126 |
MS.gene041703.t1 | AT1G76420 | 51.754 | 114 | 52 | 2 | 6 | 117 | 77 | 189 | 3.92e-34 | 127 |
MS.gene041703.t1 | AT4G10350 | 45.968 | 124 | 67 | 0 | 6 | 129 | 20 | 143 | 4.71e-34 | 125 |
MS.gene041703.t1 | AT5G24590 | 46.923 | 130 | 67 | 2 | 4 | 131 | 68 | 197 | 6.83e-34 | 128 |
MS.gene041703.t1 | AT1G62700 | 55.319 | 94 | 40 | 1 | 6 | 99 | 65 | 156 | 8.22e-34 | 127 |
MS.gene041703.t1 | AT1G62700 | 55.319 | 94 | 40 | 1 | 6 | 99 | 65 | 156 | 8.22e-34 | 127 |
MS.gene041703.t1 | AT4G10350 | 45.968 | 124 | 67 | 0 | 6 | 129 | 67 | 190 | 1.08e-33 | 125 |
MS.gene041703.t1 | AT3G61910 | 41.135 | 141 | 70 | 1 | 6 | 133 | 69 | 209 | 2.46e-33 | 124 |
MS.gene041703.t1 | AT1G56010 | 53.774 | 106 | 43 | 2 | 6 | 105 | 8 | 113 | 4.25e-33 | 122 |
MS.gene041703.t1 | AT5G64060 | 51.852 | 108 | 52 | 0 | 4 | 111 | 61 | 168 | 4.28e-33 | 124 |
MS.gene041703.t1 | AT3G29035 | 58.511 | 94 | 37 | 1 | 6 | 97 | 79 | 172 | 4.35e-33 | 124 |
MS.gene041703.t1 | AT5G09330 | 38.251 | 183 | 106 | 2 | 4 | 179 | 61 | 243 | 4.83e-33 | 126 |
MS.gene041703.t1 | AT5G09330 | 38.251 | 183 | 106 | 2 | 4 | 179 | 61 | 243 | 4.83e-33 | 126 |
MS.gene041703.t1 | AT5G09330 | 38.251 | 183 | 106 | 2 | 4 | 179 | 61 | 243 | 4.83e-33 | 126 |
MS.gene041703.t1 | AT5G09330 | 38.251 | 183 | 106 | 2 | 4 | 179 | 61 | 243 | 4.83e-33 | 126 |
MS.gene041703.t1 | AT5G09330 | 38.251 | 183 | 106 | 2 | 4 | 179 | 61 | 243 | 4.83e-33 | 126 |
MS.gene041703.t1 | AT1G33280 | 55.000 | 100 | 36 | 2 | 6 | 102 | 66 | 159 | 6.64e-33 | 123 |
MS.gene041703.t1 | AT1G12260 | 54.255 | 94 | 41 | 1 | 6 | 99 | 65 | 156 | 7.84e-33 | 123 |
MS.gene041703.t1 | AT1G12260 | 54.255 | 94 | 41 | 1 | 6 | 99 | 65 | 156 | 9.39e-33 | 124 |
MS.gene041703.t1 | AT3G15500 | 53.191 | 94 | 44 | 0 | 6 | 99 | 69 | 162 | 1.05e-32 | 122 |
MS.gene041703.t1 | AT1G56010 | 51.754 | 114 | 46 | 3 | 6 | 113 | 75 | 185 | 1.19e-32 | 122 |
MS.gene041703.t1 | AT3G15170 | 57.282 | 103 | 40 | 2 | 6 | 104 | 75 | 177 | 1.70e-32 | 122 |
MS.gene041703.t1 | AT2G46770 | 41.718 | 163 | 75 | 5 | 6 | 150 | 74 | 234 | 2.13e-32 | 123 |
MS.gene041703.t1 | AT4G27410 | 49.495 | 99 | 50 | 0 | 1 | 99 | 64 | 162 | 2.91e-32 | 121 |
MS.gene041703.t1 | AT1G79580 | 56.842 | 95 | 37 | 2 | 6 | 99 | 75 | 166 | 3.46e-32 | 122 |
MS.gene041703.t1 | AT1G79580 | 56.842 | 95 | 37 | 2 | 6 | 99 | 75 | 166 | 3.46e-32 | 122 |
MS.gene041703.t1 | AT1G79580 | 56.842 | 95 | 37 | 2 | 6 | 99 | 75 | 166 | 3.46e-32 | 122 |
MS.gene041703.t1 | AT1G79580 | 56.842 | 95 | 37 | 2 | 6 | 99 | 75 | 166 | 3.46e-32 | 122 |
MS.gene041703.t1 | AT1G79580 | 56.842 | 95 | 37 | 2 | 6 | 99 | 75 | 166 | 3.46e-32 | 122 |
MS.gene041703.t1 | AT1G61110 | 50.000 | 108 | 41 | 2 | 6 | 100 | 71 | 178 | 3.63e-32 | 121 |
MS.gene041703.t1 | AT4G27410 | 49.495 | 99 | 50 | 0 | 1 | 99 | 81 | 179 | 5.80e-32 | 120 |
MS.gene041703.t1 | AT1G52890 | 49.495 | 99 | 50 | 0 | 1 | 99 | 64 | 162 | 6.22e-32 | 120 |
MS.gene041703.t1 | AT1G32510 | 46.970 | 132 | 56 | 3 | 4 | 127 | 61 | 186 | 7.90e-32 | 119 |
MS.gene041703.t1 | AT4G36160 | 56.842 | 95 | 37 | 2 | 6 | 99 | 68 | 159 | 1.03e-31 | 121 |
MS.gene041703.t1 | AT4G36160 | 56.842 | 95 | 37 | 2 | 6 | 99 | 68 | 159 | 1.03e-31 | 121 |
MS.gene041703.t1 | AT4G36160 | 56.842 | 95 | 37 | 2 | 6 | 99 | 72 | 163 | 1.08e-31 | 121 |
MS.gene041703.t1 | AT1G77450 | 42.446 | 139 | 71 | 4 | 6 | 136 | 65 | 202 | 1.24e-31 | 118 |
MS.gene041703.t1 | AT5G18270 | 58.163 | 98 | 38 | 2 | 6 | 100 | 76 | 173 | 1.85e-31 | 119 |
MS.gene041703.t1 | AT5G18270 | 58.163 | 98 | 38 | 2 | 6 | 100 | 76 | 173 | 2.12e-31 | 119 |
MS.gene041703.t1 | AT2G02450 | 53.922 | 102 | 44 | 2 | 2 | 102 | 102 | 201 | 2.62e-31 | 120 |
MS.gene041703.t1 | AT2G02450 | 53.922 | 102 | 44 | 2 | 2 | 102 | 102 | 201 | 2.87e-31 | 120 |
MS.gene041703.t1 | AT2G18060 | 55.789 | 95 | 38 | 2 | 6 | 99 | 67 | 158 | 4.12e-31 | 119 |
MS.gene041703.t1 | AT2G18060 | 55.789 | 95 | 38 | 2 | 6 | 99 | 67 | 158 | 4.12e-31 | 119 |
MS.gene041703.t1 | AT5G46590 | 63.855 | 83 | 25 | 2 | 4 | 85 | 61 | 139 | 4.30e-31 | 117 |
MS.gene041703.t1 | AT1G01720 | 34.536 | 194 | 103 | 5 | 6 | 176 | 62 | 254 | 5.60e-31 | 117 |
MS.gene041703.t1 | AT3G04060 | 58.163 | 98 | 38 | 2 | 6 | 100 | 75 | 172 | 9.74e-31 | 118 |
MS.gene041703.t1 | AT3G04070 | 48.598 | 107 | 43 | 2 | 6 | 100 | 65 | 171 | 1.01e-30 | 118 |
MS.gene041703.t1 | AT1G32870 | 51.818 | 110 | 49 | 2 | 4 | 111 | 65 | 172 | 1.11e-30 | 120 |
MS.gene041703.t1 | AT1G32870 | 51.818 | 110 | 49 | 2 | 4 | 111 | 65 | 172 | 1.14e-30 | 120 |
MS.gene041703.t1 | AT5G53950 | 54.369 | 103 | 43 | 2 | 6 | 104 | 72 | 174 | 1.21e-30 | 118 |
MS.gene041703.t1 | AT5G62380 | 51.064 | 94 | 44 | 1 | 6 | 99 | 65 | 156 | 1.29e-30 | 117 |
MS.gene041703.t1 | AT5G62380 | 51.064 | 94 | 44 | 1 | 6 | 99 | 65 | 156 | 1.29e-30 | 117 |
MS.gene041703.t1 | AT1G32870 | 51.818 | 110 | 49 | 2 | 4 | 111 | 101 | 208 | 1.30e-30 | 120 |
MS.gene041703.t1 | AT3G49530 | 52.577 | 97 | 45 | 1 | 4 | 99 | 68 | 164 | 3.71e-30 | 117 |
MS.gene041703.t1 | AT5G08790 | 50.495 | 101 | 44 | 2 | 6 | 101 | 62 | 161 | 4.71e-30 | 115 |
MS.gene041703.t1 | AT3G15510 | 49.074 | 108 | 42 | 2 | 6 | 100 | 72 | 179 | 5.30e-30 | 116 |
MS.gene041703.t1 | AT3G49530 | 52.577 | 97 | 45 | 1 | 4 | 99 | 68 | 164 | 5.67e-30 | 118 |
MS.gene041703.t1 | AT4G28530 | 58.333 | 96 | 34 | 3 | 6 | 99 | 81 | 172 | 7.93e-30 | 115 |
MS.gene041703.t1 | AT5G63790 | 38.235 | 170 | 82 | 6 | 6 | 165 | 115 | 271 | 1.11e-29 | 114 |
MS.gene041703.t1 | AT5G63790 | 38.235 | 170 | 82 | 6 | 6 | 165 | 105 | 261 | 1.18e-29 | 114 |
MS.gene041703.t1 | AT2G33480 | 51.042 | 96 | 47 | 0 | 4 | 99 | 8 | 103 | 1.22e-29 | 112 |
MS.gene041703.t1 | AT5G66300 | 54.737 | 95 | 40 | 2 | 6 | 99 | 70 | 162 | 1.36e-29 | 114 |
MS.gene041703.t1 | AT3G04070 | 44.715 | 123 | 40 | 3 | 6 | 100 | 65 | 187 | 1.55e-29 | 115 |
MS.gene041703.t1 | AT2G17040 | 43.571 | 140 | 62 | 5 | 6 | 133 | 61 | 195 | 2.80e-29 | 112 |
MS.gene041703.t1 | AT1G32770 | 48.077 | 104 | 44 | 1 | 6 | 99 | 74 | 177 | 3.12e-29 | 114 |
MS.gene041703.t1 | AT2G33480 | 52.128 | 94 | 45 | 0 | 6 | 99 | 67 | 160 | 1.19e-28 | 110 |
MS.gene041703.t1 | AT1G26870 | 40.288 | 139 | 72 | 2 | 1 | 128 | 66 | 204 | 1.00e-27 | 111 |
MS.gene041703.t1 | AT5G13180 | 51.515 | 99 | 45 | 2 | 3 | 99 | 63 | 160 | 3.13e-27 | 106 |
MS.gene041703.t1 | AT2G33480 | 51.064 | 94 | 44 | 1 | 6 | 99 | 67 | 158 | 6.35e-27 | 106 |
MS.gene041703.t1 | AT3G10490 | 62.500 | 80 | 29 | 1 | 24 | 102 | 2 | 81 | 7.83e-27 | 107 |
MS.gene041703.t1 | AT3G10490 | 62.500 | 80 | 29 | 1 | 24 | 102 | 2 | 81 | 7.83e-27 | 107 |
MS.gene041703.t1 | AT5G39820 | 39.053 | 169 | 65 | 5 | 6 | 146 | 75 | 233 | 1.01e-26 | 107 |
MS.gene041703.t1 | AT5G22290 | 50.538 | 93 | 40 | 1 | 4 | 96 | 75 | 161 | 1.33e-26 | 107 |
MS.gene041703.t1 | AT1G52880 | 48.598 | 107 | 43 | 2 | 6 | 100 | 72 | 178 | 5.49e-26 | 104 |
MS.gene041703.t1 | AT2G27300 | 35.443 | 158 | 81 | 4 | 6 | 151 | 70 | 218 | 2.84e-24 | 100 |
MS.gene041703.t1 | AT3G44290 | 48.387 | 93 | 41 | 2 | 4 | 96 | 68 | 153 | 5.93e-24 | 97.4 |
MS.gene041703.t1 | AT3G44290 | 41.964 | 112 | 58 | 2 | 4 | 115 | 68 | 172 | 1.44e-23 | 98.6 |
MS.gene041703.t1 | AT2G43000 | 48.421 | 95 | 48 | 1 | 6 | 99 | 73 | 167 | 1.53e-23 | 97.4 |
MS.gene041703.t1 | AT2G43000 | 46.591 | 88 | 46 | 1 | 13 | 99 | 2 | 89 | 1.98e-20 | 87.0 |
MS.gene041703.t1 | AT4G01550 | 41.007 | 139 | 67 | 7 | 4 | 137 | 60 | 188 | 2.08e-19 | 88.2 |
MS.gene041703.t1 | AT4G01520 | 33.083 | 133 | 70 | 4 | 4 | 133 | 61 | 177 | 2.30e-19 | 86.3 |
MS.gene041703.t1 | AT3G44350 | 40.816 | 98 | 56 | 2 | 6 | 101 | 65 | 162 | 5.00e-19 | 84.3 |
MS.gene041703.t1 | AT5G22380 | 42.424 | 99 | 54 | 2 | 6 | 101 | 66 | 164 | 8.08e-19 | 83.6 |
MS.gene041703.t1 | AT4G01540 | 32.653 | 147 | 78 | 5 | 4 | 147 | 61 | 189 | 8.77e-19 | 86.3 |
MS.gene041703.t1 | AT2G18060 | 51.389 | 72 | 31 | 2 | 29 | 99 | 2 | 70 | 9.46e-19 | 84.3 |
MS.gene041703.t1 | AT4G01540 | 32.653 | 147 | 78 | 5 | 4 | 147 | 61 | 189 | 9.48e-19 | 85.9 |
MS.gene041703.t1 | AT4G01540 | 48.684 | 76 | 36 | 1 | 4 | 76 | 61 | 136 | 1.08e-18 | 85.9 |
MS.gene041703.t1 | AT4G01540 | 48.684 | 76 | 36 | 1 | 4 | 76 | 61 | 136 | 1.28e-18 | 85.9 |
MS.gene041703.t1 | AT3G12910 | 42.202 | 109 | 48 | 2 | 6 | 99 | 77 | 185 | 3.12e-18 | 83.2 |
MS.gene041703.t1 | AT5G04395 | 50.000 | 76 | 35 | 1 | 4 | 76 | 94 | 169 | 3.35e-17 | 78.2 |
MS.gene041703.t1 | AT5G22290 | 50.746 | 67 | 27 | 1 | 30 | 96 | 2 | 62 | 2.22e-16 | 77.0 |
MS.gene041703.t1 | AT3G44350 | 49.296 | 71 | 35 | 1 | 6 | 75 | 65 | 135 | 7.37e-16 | 73.9 |
MS.gene041703.t1 | AT3G04420 | 37.374 | 99 | 57 | 1 | 4 | 102 | 60 | 153 | 8.31e-16 | 76.3 |
MS.gene041703.t1 | AT3G04420 | 37.374 | 99 | 57 | 1 | 4 | 102 | 60 | 153 | 2.13e-15 | 75.9 |
MS.gene041703.t1 | AT1G02220 | 34.343 | 99 | 57 | 2 | 4 | 102 | 60 | 150 | 1.34e-12 | 67.8 |
MS.gene041703.t1 | AT4G28530 | 75.000 | 36 | 9 | 0 | 6 | 41 | 81 | 116 | 6.22e-12 | 65.5 |
Find 43 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCAATGGCATCTTCAATTT+TGG | 0.083796 | 6.3:+70449570 | None:intergenic |
TTCACACTCATTATTGATTA+TGG | 0.195935 | 6.3:+70455389 | None:intergenic |
GATGATGCTCCTAGTATTTC+TGG | 0.199026 | 6.3:+70455357 | None:intergenic |
ATCTTACTTTAGTGGAATAT+TGG | 0.253439 | 6.3:-70449668 | MS.gene041703:CDS |
CTATTTGTTCTGAATCCATT+AGG | 0.256225 | 6.3:+70458754 | None:intergenic |
ACGATAAACATCTCTATATT+TGG | 0.291433 | 6.3:+70449380 | None:intergenic |
TCATACCAATAGGTCTGTTT+TGG | 0.299769 | 6.3:+70458677 | None:intergenic |
TATTTGTTCTGAATCCATTA+GGG | 0.344141 | 6.3:+70458755 | None:intergenic |
GAATAAGAATCTTACTTTAG+TGG | 0.358657 | 6.3:-70449676 | MS.gene041703:intron |
GAGCAACAAGAGCAGGATAC+TGG | 0.370822 | 6.3:-70458732 | MS.gene041703:CDS |
AAATGGAATCTGTTCTGATA+TGG | 0.374346 | 6.3:-70455460 | MS.gene041703:CDS |
CTCAAGGAATTAGAACTGAT+TGG | 0.379320 | 6.3:-70458621 | MS.gene041703:CDS |
TCATGCCAAAACAGACCTAT+TGG | 0.385273 | 6.3:-70458682 | MS.gene041703:CDS |
ATCTCTATATTTGGTCACTT+TGG | 0.395449 | 6.3:+70449389 | None:intergenic |
TGAGGACAATACTGGATTAC+AGG | 0.413847 | 6.3:-70458563 | MS.gene041703:intron |
AAGACTTTGGTTTACTATAG+AGG | 0.415065 | 6.3:-70458652 | MS.gene041703:CDS |
AAAAGTTGTTTGTGCATTTG+TGG | 0.426480 | 6.3:+70449621 | None:intergenic |
AGGAAGACAAAGATGATTCA+TGG | 0.428096 | 6.3:-70455320 | MS.gene041703:CDS |
GATGAATTCACTCTTGTGAT+TGG | 0.432170 | 6.3:-70450921 | MS.gene041703:CDS |
AAAGAGTGTGAGGACAATAC+TGG | 0.433988 | 6.3:-70458571 | MS.gene041703:CDS |
TCCAAAATTGAAGATGCCAT+TGG | 0.447494 | 6.3:-70449571 | MS.gene041703:CDS |
TCAAGGAATTAGAACTGATT+GGG | 0.453361 | 6.3:-70458620 | MS.gene041703:CDS |
CCTTGCTTCTTTAAATCCAA+TGG | 0.457248 | 6.3:+70449555 | None:intergenic |
TACTTTAGTGGAATATTGGA+TGG | 0.460350 | 6.3:-70449664 | MS.gene041703:CDS |
GAGAAAACTTGTCGAAAGAA+TGG | 0.460384 | 6.3:-70450959 | MS.gene041703:CDS |
AAAGTCTTCTTCATACCAAT+AGG | 0.464132 | 6.3:+70458667 | None:intergenic |
ACAAATAGAGCAACAAGAGC+AGG | 0.482385 | 6.3:-70458739 | MS.gene041703:CDS |
TATTGGTATGAAGAAGACTT+TGG | 0.489248 | 6.3:-70458665 | MS.gene041703:CDS |
CGAGACAGAAAATACCCTAA+TGG | 0.492822 | 6.3:-70458769 | MS.gene041703:CDS |
GATGTTTATCGTCTTTCTAA+CGG | 0.503991 | 6.3:-70449369 | MS.gene041703:CDS |
CCTCACACTCTTTATCATCA+AGG | 0.523352 | 6.3:+70458581 | None:intergenic |
ATCATCTTCATGTTTAGAAG+AGG | 0.530767 | 6.3:-70455340 | MS.gene041703:CDS |
TGCCAAGTAGAGATCCAGAA+TGG | 0.535141 | 6.3:-70458807 | MS.gene041703:intron |
GTGAATTCATCATCACATGC+AGG | 0.573854 | 6.3:+70450933 | None:intergenic |
ATGATGTCTCCAGAAATACT+AGG | 0.584004 | 6.3:-70455366 | MS.gene041703:CDS |
GCAGGATACTGGAAATCTAC+CGG | 0.591478 | 6.3:-70458721 | MS.gene041703:CDS |
CCATTGGATTTAAAGAAGCA+AGG | 0.592629 | 6.3:-70449555 | MS.gene041703:intron |
ATTCACTCTTGTGATTGGCA+AGG | 0.609247 | 6.3:-70450916 | MS.gene041703:intron |
CAATCAGTTCTAATTCCTTG+AGG | 0.630679 | 6.3:+70458622 | None:intergenic |
TATAGAGGAAGAGCTCCTCA+AGG | 0.649242 | 6.3:-70458637 | MS.gene041703:CDS |
CCTTGATGATAAAGAGTGTG+AGG | 0.659570 | 6.3:-70458581 | MS.gene041703:CDS |
AATTCATTACAGAAGATGCA+TGG | 0.663634 | 6.3:-70455293 | MS.gene041703:intron |
TCTGATATGGAAGAGCAACA+AGG | 0.679765 | 6.3:-70455447 | MS.gene041703:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.3 | gene | 70449308 | 70458995 | 70449308 | ID=MS.gene041703 |
chr6.3 | mRNA | 70449308 | 70458995 | 70449308 | ID=MS.gene041703.t1;Parent=MS.gene041703 |
chr6.3 | exon | 70458988 | 70458995 | 70458988 | ID=MS.gene041703.t1.exon1;Parent=MS.gene041703.t1 |
chr6.3 | CDS | 70458988 | 70458995 | 70458988 | ID=cds.MS.gene041703.t1;Parent=MS.gene041703.t1 |
chr6.3 | exon | 70458564 | 70458819 | 70458564 | ID=MS.gene041703.t1.exon2;Parent=MS.gene041703.t1 |
chr6.3 | CDS | 70458564 | 70458819 | 70458564 | ID=cds.MS.gene041703.t1;Parent=MS.gene041703.t1 |
chr6.3 | exon | 70455294 | 70455514 | 70455294 | ID=MS.gene041703.t1.exon3;Parent=MS.gene041703.t1 |
chr6.3 | CDS | 70455294 | 70455514 | 70455294 | ID=cds.MS.gene041703.t1;Parent=MS.gene041703.t1 |
chr6.3 | exon | 70450917 | 70451049 | 70450917 | ID=MS.gene041703.t1.exon4;Parent=MS.gene041703.t1 |
chr6.3 | CDS | 70450917 | 70451049 | 70450917 | ID=cds.MS.gene041703.t1;Parent=MS.gene041703.t1 |
chr6.3 | exon | 70449556 | 70449691 | 70449556 | ID=MS.gene041703.t1.exon5;Parent=MS.gene041703.t1 |
chr6.3 | CDS | 70449556 | 70449691 | 70449556 | ID=cds.MS.gene041703.t1;Parent=MS.gene041703.t1 |
chr6.3 | exon | 70449308 | 70449420 | 70449308 | ID=MS.gene041703.t1.exon6;Parent=MS.gene041703.t1 |
chr6.3 | CDS | 70449308 | 70449420 | 70449308 | ID=cds.MS.gene041703.t1;Parent=MS.gene041703.t1 |
Gene Sequence |
Protein sequence |