Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene04173.t1 | XP_003600359.1 | 53.6 | 317 | 25 | 2 | 1 | 195 | 52 | 368 | 2.60E-78 | 301.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene04173.t1 | Q39027 | 43.8 | 317 | 54 | 3 | 2 | 195 | 53 | 368 | 3.1e-59 | 229.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene04173.t1 | G7IV22 | 53.6 | 317 | 25 | 2 | 1 | 195 | 52 | 368 | 1.9e-78 | 301.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene04173.t1 | MTR_3g460950 | 78.981 | 157 | 13 | 1 | 1 | 137 | 52 | 208 | 1.25e-78 | 239 |
MS.gene04173.t1 | MTR_3g460950 | 75.806 | 62 | 15 | 0 | 134 | 195 | 307 | 368 | 8.40e-27 | 105 |
MS.gene04173.t1 | MTR_3g060330 | 78.981 | 157 | 13 | 1 | 1 | 137 | 52 | 208 | 1.25e-78 | 239 |
MS.gene04173.t1 | MTR_3g060330 | 75.806 | 62 | 15 | 0 | 134 | 195 | 307 | 368 | 8.40e-27 | 105 |
MS.gene04173.t1 | MTR_8g086000 | 65.823 | 158 | 34 | 1 | 2 | 139 | 53 | 210 | 2.65e-64 | 202 |
MS.gene04173.t1 | MTR_8g086000 | 64.516 | 62 | 21 | 1 | 134 | 195 | 308 | 368 | 8.98e-23 | 94.0 |
MS.gene04173.t1 | MTR_8g086000 | 65.823 | 158 | 34 | 1 | 2 | 139 | 96 | 253 | 6.42e-64 | 202 |
MS.gene04173.t1 | MTR_8g086000 | 64.516 | 62 | 21 | 1 | 134 | 195 | 351 | 411 | 9.17e-23 | 94.4 |
MS.gene04173.t1 | MTR_3g112210 | 64.331 | 157 | 36 | 1 | 2 | 138 | 53 | 209 | 2.05e-62 | 197 |
MS.gene04173.t1 | MTR_3g112210 | 48.387 | 62 | 31 | 1 | 134 | 195 | 308 | 368 | 1.67e-13 | 68.2 |
MS.gene04173.t1 | MTR_4g087620 | 58.170 | 153 | 43 | 2 | 2 | 134 | 76 | 227 | 1.79e-54 | 174 |
MS.gene04173.t1 | MTR_4g087620 | 58.170 | 153 | 43 | 2 | 2 | 134 | 76 | 227 | 2.31e-53 | 175 |
MS.gene04173.t1 | MTR_5g010030 | 57.962 | 157 | 45 | 2 | 2 | 138 | 62 | 217 | 7.98e-53 | 173 |
MS.gene04173.t1 | MTR_8g098845 | 57.962 | 157 | 45 | 2 | 2 | 138 | 73 | 228 | 2.46e-52 | 172 |
MS.gene04173.t1 | MTR_7g078690 | 57.325 | 157 | 46 | 2 | 2 | 138 | 59 | 214 | 2.11e-51 | 169 |
MS.gene04173.t1 | MTR_4g061320 | 57.692 | 156 | 45 | 2 | 2 | 137 | 61 | 215 | 2.26e-51 | 169 |
MS.gene04173.t1 | MTR_8g028720 | 56.688 | 157 | 47 | 2 | 2 | 138 | 58 | 213 | 1.23e-50 | 167 |
MS.gene04173.t1 | MTR_4g061130 | 57.516 | 153 | 44 | 2 | 2 | 134 | 60 | 211 | 1.61e-50 | 167 |
MS.gene04173.t1 | MTR_3g460980 | 67.910 | 134 | 11 | 3 | 1 | 115 | 52 | 172 | 2.92e-48 | 160 |
MS.gene04173.t1 | MTR_3g460980 | 80.645 | 62 | 12 | 0 | 134 | 195 | 277 | 338 | 2.05e-30 | 114 |
MS.gene04173.t1 | MTR_3g060390 | 66.418 | 134 | 9 | 2 | 1 | 115 | 52 | 168 | 1.38e-47 | 159 |
MS.gene04173.t1 | MTR_3g060390 | 80.645 | 62 | 12 | 0 | 134 | 195 | 273 | 334 | 2.31e-30 | 114 |
MS.gene04173.t1 | MTR_2g021330 | 50.000 | 154 | 54 | 3 | 3 | 133 | 47 | 200 | 1.32e-42 | 147 |
MS.gene04173.t1 | MTR_3g089510 | 49.351 | 154 | 55 | 2 | 3 | 133 | 35 | 188 | 1.60e-42 | 150 |
MS.gene04173.t1 | MTR_3g089510 | 49.351 | 154 | 55 | 2 | 3 | 133 | 47 | 200 | 2.27e-42 | 150 |
MS.gene04173.t1 | MTR_2g021330 | 50.000 | 154 | 54 | 3 | 3 | 133 | 47 | 200 | 8.55e-42 | 148 |
MS.gene04173.t1 | MTR_4g117490 | 49.351 | 154 | 55 | 3 | 3 | 133 | 47 | 200 | 9.79e-42 | 147 |
MS.gene04173.t1 | MTR_4g117490 | 49.351 | 154 | 55 | 3 | 3 | 133 | 47 | 200 | 1.44e-41 | 147 |
MS.gene04173.t1 | MTR_3g060350 | 64.754 | 122 | 32 | 2 | 2 | 112 | 58 | 179 | 3.14e-41 | 140 |
MS.gene04173.t1 | MTR_6g079470 | 48.052 | 154 | 57 | 2 | 3 | 133 | 111 | 264 | 4.67e-41 | 146 |
MS.gene04173.t1 | MTR_8g106960 | 46.753 | 154 | 59 | 2 | 3 | 133 | 140 | 293 | 1.01e-40 | 145 |
MS.gene04173.t1 | MTR_8g461040 | 48.701 | 154 | 56 | 3 | 3 | 133 | 48 | 201 | 1.05e-40 | 145 |
MS.gene04173.t1 | MTR_5g091680 | 47.403 | 154 | 58 | 2 | 3 | 133 | 44 | 197 | 2.23e-40 | 142 |
MS.gene04173.t1 | MTR_8g106960 | 46.753 | 154 | 59 | 2 | 3 | 133 | 140 | 293 | 2.83e-40 | 144 |
MS.gene04173.t1 | MTR_5g091680 | 47.403 | 154 | 58 | 2 | 3 | 133 | 44 | 197 | 3.57e-40 | 142 |
MS.gene04173.t1 | MTR_5g091680 | 47.403 | 154 | 58 | 2 | 3 | 133 | 42 | 195 | 4.71e-40 | 142 |
MS.gene04173.t1 | MTR_5g091680 | 47.403 | 154 | 58 | 2 | 3 | 133 | 44 | 197 | 4.98e-40 | 142 |
MS.gene04173.t1 | MTR_2g072840 | 45.455 | 154 | 61 | 2 | 3 | 133 | 47 | 200 | 6.92e-40 | 143 |
MS.gene04173.t1 | MTR_2g072840 | 46.104 | 154 | 60 | 2 | 3 | 133 | 47 | 200 | 1.45e-39 | 141 |
MS.gene04173.t1 | MTR_3g460960 | 56.000 | 125 | 42 | 3 | 2 | 125 | 58 | 170 | 6.31e-33 | 119 |
MS.gene04173.t1 | MTR_8g086010 | 48.951 | 143 | 46 | 4 | 2 | 143 | 169 | 285 | 3.37e-30 | 115 |
MS.gene04173.t1 | MTR_8g086010 | 60.317 | 63 | 23 | 2 | 134 | 195 | 361 | 422 | 1.19e-15 | 74.7 |
MS.gene04173.t1 | MTR_2g032060 | 38.650 | 163 | 69 | 4 | 3 | 142 | 26 | 180 | 9.37e-25 | 98.2 |
MS.gene04173.t1 | MTR_4g094430 | 38.037 | 163 | 70 | 4 | 3 | 142 | 26 | 180 | 1.61e-24 | 97.8 |
MS.gene04173.t1 | MTR_2g072840 | 44.954 | 109 | 37 | 2 | 48 | 133 | 2 | 110 | 3.93e-24 | 99.0 |
MS.gene04173.t1 | MTR_3g040520 | 36.527 | 167 | 73 | 3 | 1 | 134 | 45 | 211 | 4.24e-22 | 93.2 |
MS.gene04173.t1 | MTR_5g008860 | 37.179 | 156 | 73 | 3 | 1 | 134 | 160 | 312 | 1.93e-21 | 91.7 |
MS.gene04173.t1 | MTR_3g040810 | 35.928 | 167 | 74 | 3 | 1 | 134 | 43 | 209 | 1.99e-21 | 91.3 |
MS.gene04173.t1 | MTR_5g026960 | 38.710 | 155 | 64 | 6 | 2 | 134 | 25 | 170 | 6.49e-21 | 89.7 |
MS.gene04173.t1 | MTR_8g012450 | 37.419 | 155 | 68 | 5 | 1 | 134 | 24 | 170 | 7.07e-21 | 89.4 |
MS.gene04173.t1 | MTR_8g012450 | 37.419 | 155 | 68 | 5 | 1 | 134 | 24 | 170 | 1.68e-20 | 88.2 |
MS.gene04173.t1 | MTR_8g080190 | 37.908 | 153 | 71 | 2 | 3 | 134 | 407 | 556 | 1.92e-20 | 88.6 |
MS.gene04173.t1 | MTR_3g054080 | 36.709 | 158 | 66 | 5 | 3 | 134 | 36 | 185 | 2.09e-20 | 87.8 |
MS.gene04173.t1 | MTR_6g080470 | 37.255 | 153 | 70 | 3 | 3 | 134 | 36 | 183 | 2.38e-20 | 87.8 |
MS.gene04173.t1 | MTR_8g080190 | 37.908 | 153 | 71 | 2 | 3 | 134 | 407 | 556 | 2.93e-20 | 88.2 |
MS.gene04173.t1 | MTR_8g071230 | 39.355 | 155 | 63 | 7 | 2 | 134 | 25 | 170 | 5.82e-20 | 87.0 |
MS.gene04173.t1 | MTR_3g085650 | 37.255 | 153 | 72 | 2 | 3 | 134 | 438 | 587 | 3.27e-19 | 85.1 |
MS.gene04173.t1 | MTR_4g109090 | 36.709 | 158 | 71 | 6 | 1 | 134 | 125 | 277 | 3.63e-19 | 85.1 |
MS.gene04173.t1 | MTR_3g085650 | 37.255 | 153 | 72 | 2 | 3 | 134 | 438 | 587 | 4.06e-19 | 84.7 |
MS.gene04173.t1 | MTR_3g085650 | 37.255 | 153 | 72 | 2 | 3 | 134 | 438 | 587 | 4.22e-19 | 84.7 |
MS.gene04173.t1 | MTR_3g085650 | 37.255 | 153 | 72 | 2 | 3 | 134 | 438 | 587 | 5.90e-19 | 84.3 |
MS.gene04173.t1 | MTR_3g096960 | 36.420 | 162 | 69 | 4 | 4 | 134 | 44 | 202 | 6.83e-19 | 84.0 |
MS.gene04173.t1 | MTR_4g078290 | 37.736 | 159 | 65 | 8 | 3 | 134 | 150 | 301 | 1.16e-18 | 83.6 |
MS.gene04173.t1 | MTR_4g078290 | 37.736 | 159 | 65 | 8 | 3 | 134 | 150 | 301 | 1.18e-18 | 83.6 |
MS.gene04173.t1 | MTR_1g075610 | 37.342 | 158 | 73 | 3 | 3 | 134 | 40 | 197 | 1.85e-18 | 81.6 |
MS.gene04173.t1 | MTR_2g085200 | 36.709 | 158 | 71 | 6 | 1 | 134 | 154 | 306 | 9.45e-18 | 80.9 |
MS.gene04173.t1 | MTR_4g103810 | 35.948 | 153 | 76 | 2 | 3 | 134 | 130 | 281 | 1.03e-17 | 80.5 |
MS.gene04173.t1 | MTR_4g103810 | 35.948 | 153 | 76 | 2 | 3 | 134 | 240 | 391 | 2.13e-17 | 79.7 |
MS.gene04173.t1 | MTR_6g013030 | 34.810 | 158 | 74 | 6 | 1 | 134 | 130 | 282 | 2.22e-17 | 79.7 |
MS.gene04173.t1 | MTR_1g098300 | 36.306 | 157 | 71 | 4 | 2 | 134 | 147 | 298 | 6.59e-17 | 78.6 |
MS.gene04173.t1 | MTR_7g011800 | 37.580 | 157 | 71 | 6 | 1 | 134 | 140 | 292 | 9.16e-17 | 78.2 |
MS.gene04173.t1 | MTR_3g098760 | 37.179 | 156 | 69 | 6 | 3 | 134 | 119 | 269 | 9.53e-17 | 77.8 |
MS.gene04173.t1 | MTR_2g090405 | 38.312 | 154 | 62 | 6 | 7 | 134 | 167 | 313 | 1.34e-16 | 77.4 |
MS.gene04173.t1 | MTR_8g092290 | 33.548 | 155 | 78 | 3 | 2 | 134 | 162 | 313 | 1.57e-16 | 77.4 |
MS.gene04173.t1 | MTR_8g099770 | 37.013 | 154 | 72 | 3 | 3 | 134 | 112 | 262 | 4.43e-16 | 75.9 |
MS.gene04173.t1 | MTR_8g432510 | 35.185 | 162 | 68 | 7 | 1 | 134 | 159 | 311 | 1.00e-15 | 74.7 |
MS.gene04173.t1 | MTR_4g109090 | 37.692 | 130 | 56 | 3 | 27 | 134 | 3 | 129 | 1.42e-15 | 74.3 |
MS.gene04173.t1 | MTR_8g461270 | 31.176 | 170 | 86 | 5 | 1 | 143 | 67 | 232 | 1.45e-15 | 73.9 |
MS.gene04173.t1 | MTR_4g118780 | 36.538 | 156 | 70 | 6 | 3 | 134 | 126 | 276 | 2.75e-15 | 73.6 |
MS.gene04173.t1 | MTR_2g020210 | 35.897 | 156 | 71 | 6 | 3 | 134 | 124 | 274 | 6.83e-15 | 72.4 |
MS.gene04173.t1 | MTR_7g114300 | 36.076 | 158 | 68 | 7 | 3 | 134 | 129 | 279 | 9.41e-15 | 72.0 |
MS.gene04173.t1 | MTR_7g114300 | 36.076 | 158 | 68 | 7 | 3 | 134 | 129 | 279 | 1.00e-14 | 71.6 |
MS.gene04173.t1 | MTR_7g114300 | 36.076 | 158 | 68 | 7 | 3 | 134 | 129 | 279 | 1.14e-14 | 72.0 |
MS.gene04173.t1 | MTR_7g114300 | 36.076 | 158 | 68 | 7 | 3 | 134 | 129 | 279 | 1.16e-14 | 72.0 |
MS.gene04173.t1 | MTR_4g007750 | 33.136 | 169 | 78 | 5 | 1 | 134 | 24 | 192 | 1.20e-14 | 71.2 |
MS.gene04173.t1 | MTR_1g081870 | 37.179 | 156 | 69 | 7 | 3 | 134 | 144 | 294 | 2.12e-14 | 71.2 |
MS.gene04173.t1 | MTR_1g048630 | 30.405 | 148 | 86 | 3 | 3 | 134 | 29 | 175 | 8.27e-14 | 69.7 |
MS.gene04173.t1 | MTR_2g016490 | 30.625 | 160 | 78 | 5 | 1 | 134 | 60 | 212 | 4.67e-13 | 67.0 |
MS.gene04173.t1 | MTR_2g083940 | 32.716 | 162 | 72 | 7 | 1 | 134 | 108 | 260 | 6.71e-13 | 66.6 |
MS.gene04173.t1 | MTR_2g083940 | 32.716 | 162 | 72 | 7 | 1 | 134 | 54 | 206 | 7.05e-13 | 66.2 |
MS.gene04173.t1 | MTR_1g086370 | 30.625 | 160 | 78 | 5 | 1 | 134 | 62 | 214 | 5.54e-12 | 63.9 |
MS.gene04173.t1 | MTR_1g086370 | 30.625 | 160 | 78 | 5 | 1 | 134 | 95 | 247 | 6.39e-12 | 63.9 |
MS.gene04173.t1 | MTR_1g113960 | 29.054 | 148 | 87 | 3 | 4 | 134 | 322 | 468 | 4.69e-11 | 61.2 |
MS.gene04173.t1 | MTR_2g005620 | 30.189 | 159 | 78 | 7 | 2 | 134 | 111 | 262 | 4.76e-11 | 61.2 |
MS.gene04173.t1 | MTR_1g113960 | 29.054 | 148 | 87 | 3 | 4 | 134 | 322 | 468 | 5.22e-11 | 61.2 |
MS.gene04173.t1 | MTR_4g006970 | 30.380 | 158 | 80 | 6 | 1 | 134 | 40 | 191 | 5.69e-11 | 60.8 |
MS.gene04173.t1 | MTR_5g019700 | 31.452 | 124 | 66 | 4 | 27 | 133 | 91 | 212 | 6.04e-11 | 60.8 |
MS.gene04173.t1 | MTR_1g080440 | 29.870 | 154 | 75 | 5 | 7 | 132 | 735 | 883 | 8.73e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene04173.t1 | AT2G18170 | 66.879 | 157 | 32 | 1 | 2 | 138 | 53 | 209 | 4.15e-65 | 204 |
MS.gene04173.t1 | AT2G18170 | 56.452 | 62 | 26 | 1 | 134 | 195 | 308 | 368 | 5.88e-16 | 75.1 |
MS.gene04173.t1 | AT1G10210 | 65.605 | 157 | 34 | 1 | 2 | 138 | 53 | 209 | 4.71e-64 | 202 |
MS.gene04173.t1 | AT1G10210 | 59.677 | 62 | 24 | 1 | 134 | 195 | 308 | 368 | 2.09e-17 | 79.3 |
MS.gene04173.t1 | AT1G10210 | 65.605 | 157 | 34 | 1 | 2 | 138 | 53 | 209 | 4.71e-64 | 202 |
MS.gene04173.t1 | AT1G10210 | 59.677 | 62 | 24 | 1 | 134 | 195 | 308 | 368 | 2.09e-17 | 79.3 |
MS.gene04173.t1 | AT1G10210 | 65.605 | 157 | 34 | 1 | 2 | 138 | 53 | 209 | 4.71e-64 | 202 |
MS.gene04173.t1 | AT1G10210 | 59.677 | 62 | 24 | 1 | 134 | 195 | 308 | 368 | 2.09e-17 | 79.3 |
MS.gene04173.t1 | AT1G59580 | 63.057 | 157 | 38 | 1 | 2 | 138 | 53 | 209 | 3.83e-62 | 197 |
MS.gene04173.t1 | AT1G59580 | 55.556 | 63 | 25 | 2 | 134 | 194 | 308 | 369 | 3.31e-12 | 64.7 |
MS.gene04173.t1 | AT1G59580 | 63.057 | 157 | 38 | 1 | 2 | 138 | 53 | 209 | 3.83e-62 | 197 |
MS.gene04173.t1 | AT1G59580 | 55.556 | 63 | 25 | 2 | 134 | 194 | 308 | 369 | 3.31e-12 | 64.7 |
MS.gene04173.t1 | AT4G36450 | 64.968 | 157 | 32 | 2 | 2 | 138 | 53 | 206 | 5.09e-61 | 194 |
MS.gene04173.t1 | AT2G43790 | 57.516 | 153 | 44 | 2 | 2 | 134 | 84 | 235 | 3.35e-53 | 175 |
MS.gene04173.t1 | AT4G01370 | 57.962 | 157 | 45 | 2 | 2 | 138 | 64 | 219 | 8.38e-53 | 173 |
MS.gene04173.t1 | AT1G07880 | 57.516 | 153 | 44 | 2 | 2 | 134 | 54 | 205 | 4.07e-52 | 168 |
MS.gene04173.t1 | AT3G45640 | 58.170 | 153 | 43 | 2 | 2 | 134 | 59 | 210 | 8.47e-52 | 170 |
MS.gene04173.t1 | AT3G59790 | 56.209 | 153 | 46 | 2 | 2 | 134 | 81 | 232 | 1.96e-51 | 170 |
MS.gene04173.t1 | AT1G07880 | 57.516 | 153 | 44 | 2 | 2 | 134 | 54 | 205 | 5.62e-51 | 168 |
MS.gene04173.t1 | AT2G46070 | 57.051 | 156 | 46 | 2 | 3 | 138 | 63 | 217 | 1.42e-49 | 163 |
MS.gene04173.t1 | AT4G11330 | 54.902 | 153 | 48 | 2 | 2 | 134 | 64 | 215 | 1.64e-49 | 164 |
MS.gene04173.t1 | AT1G01560 | 55.414 | 157 | 49 | 2 | 2 | 138 | 61 | 216 | 2.69e-49 | 161 |
MS.gene04173.t1 | AT1G01560 | 55.414 | 157 | 49 | 2 | 2 | 138 | 61 | 216 | 2.69e-49 | 161 |
MS.gene04173.t1 | AT2G46070 | 57.051 | 156 | 46 | 2 | 3 | 138 | 63 | 217 | 4.05e-49 | 164 |
MS.gene04173.t1 | AT2G46070 | 57.051 | 156 | 46 | 2 | 3 | 138 | 97 | 251 | 6.41e-49 | 164 |
MS.gene04173.t1 | AT1G01560 | 55.414 | 157 | 49 | 2 | 2 | 138 | 61 | 216 | 9.58e-49 | 162 |
MS.gene04173.t1 | AT1G01560 | 55.414 | 157 | 49 | 2 | 2 | 138 | 61 | 216 | 1.92e-48 | 162 |
MS.gene04173.t1 | AT3G14720 | 48.052 | 154 | 57 | 2 | 3 | 133 | 47 | 200 | 2.25e-42 | 150 |
MS.gene04173.t1 | AT3G14720 | 47.500 | 160 | 60 | 3 | 3 | 138 | 47 | 206 | 2.33e-42 | 147 |
MS.gene04173.t1 | AT3G14720 | 47.500 | 160 | 60 | 3 | 3 | 138 | 47 | 206 | 2.33e-42 | 147 |
MS.gene04173.t1 | AT1G18150 | 48.701 | 154 | 56 | 2 | 3 | 133 | 126 | 279 | 6.14e-42 | 149 |
MS.gene04173.t1 | AT1G18150 | 48.701 | 154 | 56 | 2 | 3 | 133 | 126 | 279 | 6.14e-42 | 149 |
MS.gene04173.t1 | AT1G18150 | 48.701 | 154 | 56 | 2 | 3 | 133 | 126 | 279 | 6.14e-42 | 149 |
MS.gene04173.t1 | AT2G42880 | 50.000 | 154 | 54 | 3 | 3 | 133 | 47 | 200 | 8.76e-42 | 146 |
MS.gene04173.t1 | AT1G53510 | 47.403 | 154 | 58 | 2 | 3 | 133 | 47 | 200 | 1.49e-41 | 148 |
MS.gene04173.t1 | AT5G19010 | 49.351 | 154 | 55 | 3 | 3 | 133 | 47 | 200 | 2.25e-41 | 147 |
MS.gene04173.t1 | AT2G42880 | 50.000 | 154 | 54 | 3 | 3 | 133 | 47 | 200 | 3.47e-41 | 147 |
MS.gene04173.t1 | AT3G18040 | 47.403 | 154 | 58 | 2 | 3 | 133 | 40 | 193 | 7.35e-41 | 144 |
MS.gene04173.t1 | AT3G18040 | 47.403 | 154 | 58 | 2 | 3 | 133 | 45 | 198 | 8.09e-41 | 144 |
MS.gene04173.t1 | AT3G18040 | 47.403 | 154 | 58 | 2 | 3 | 133 | 154 | 307 | 1.39e-40 | 145 |
MS.gene04173.t1 | AT1G73670 | 48.052 | 154 | 57 | 2 | 3 | 133 | 112 | 265 | 1.53e-40 | 145 |
MS.gene04173.t1 | AT3G18040 | 47.403 | 154 | 58 | 2 | 3 | 133 | 154 | 307 | 1.64e-40 | 145 |
MS.gene04173.t1 | AT2G01450 | 46.753 | 154 | 59 | 2 | 3 | 133 | 38 | 191 | 1.81e-40 | 143 |
MS.gene04173.t1 | AT2G01450 | 46.753 | 154 | 59 | 2 | 3 | 133 | 38 | 191 | 1.81e-40 | 143 |
MS.gene04173.t1 | AT2G01450 | 46.753 | 154 | 59 | 2 | 3 | 133 | 38 | 191 | 1.81e-40 | 143 |
MS.gene04173.t1 | AT2G01450 | 46.753 | 154 | 59 | 2 | 3 | 133 | 38 | 191 | 1.81e-40 | 143 |
MS.gene04173.t1 | AT3G18040 | 45.872 | 109 | 36 | 2 | 48 | 133 | 2 | 110 | 4.96e-25 | 100 |
MS.gene04173.t1 | AT3G48750 | 38.065 | 155 | 68 | 3 | 3 | 134 | 26 | 175 | 8.84e-25 | 98.6 |
MS.gene04173.t1 | AT5G63370 | 37.580 | 157 | 71 | 3 | 3 | 134 | 185 | 339 | 1.70e-23 | 96.7 |
MS.gene04173.t1 | AT5G63370 | 37.580 | 157 | 71 | 3 | 3 | 134 | 185 | 339 | 2.63e-23 | 96.7 |
MS.gene04173.t1 | AT5G63370 | 37.580 | 157 | 71 | 3 | 3 | 134 | 185 | 339 | 2.63e-23 | 96.7 |
MS.gene04173.t1 | AT1G73690 | 37.500 | 152 | 69 | 3 | 4 | 134 | 34 | 180 | 2.90e-23 | 95.9 |
MS.gene04173.t1 | AT5G63370 | 37.580 | 157 | 71 | 3 | 3 | 134 | 319 | 473 | 4.98e-23 | 96.3 |
MS.gene04173.t1 | AT5G63370 | 37.580 | 157 | 71 | 3 | 3 | 134 | 319 | 473 | 4.98e-23 | 96.3 |
MS.gene04173.t1 | AT5G63370 | 37.580 | 157 | 71 | 3 | 3 | 134 | 319 | 473 | 4.98e-23 | 96.3 |
MS.gene04173.t1 | AT5G63370 | 37.580 | 157 | 71 | 3 | 3 | 134 | 319 | 473 | 4.98e-23 | 96.3 |
MS.gene04173.t1 | AT5G63370 | 37.580 | 157 | 71 | 3 | 3 | 134 | 319 | 473 | 4.98e-23 | 96.3 |
MS.gene04173.t1 | AT5G63370 | 37.580 | 157 | 71 | 3 | 3 | 134 | 319 | 473 | 5.65e-23 | 95.9 |
MS.gene04173.t1 | AT5G63370 | 37.580 | 157 | 71 | 3 | 3 | 134 | 319 | 473 | 5.65e-23 | 95.9 |
MS.gene04173.t1 | AT5G10270 | 37.126 | 167 | 72 | 3 | 1 | 134 | 46 | 212 | 3.99e-22 | 93.2 |
MS.gene04173.t1 | AT5G64960 | 37.126 | 167 | 72 | 3 | 1 | 134 | 46 | 212 | 6.07e-22 | 92.8 |
MS.gene04173.t1 | AT1G67580 | 37.908 | 153 | 71 | 2 | 3 | 134 | 428 | 577 | 7.59e-22 | 92.8 |
MS.gene04173.t1 | AT1G67580 | 37.908 | 153 | 71 | 2 | 3 | 134 | 428 | 577 | 7.59e-22 | 92.8 |
MS.gene04173.t1 | AT4G19110 | 38.710 | 155 | 64 | 6 | 2 | 134 | 25 | 170 | 1.19e-21 | 91.7 |
MS.gene04173.t1 | AT4G19110 | 38.710 | 155 | 64 | 6 | 2 | 134 | 25 | 170 | 1.30e-21 | 91.7 |
MS.gene04173.t1 | AT4G13020 | 38.065 | 155 | 67 | 5 | 1 | 134 | 24 | 170 | 4.06e-21 | 90.1 |
MS.gene04173.t1 | AT4G13020 | 38.065 | 155 | 67 | 5 | 1 | 134 | 24 | 170 | 4.30e-21 | 89.7 |
MS.gene04173.t1 | AT4G13020 | 38.065 | 155 | 67 | 5 | 1 | 134 | 32 | 178 | 5.13e-21 | 90.1 |
MS.gene04173.t1 | AT4G13020 | 38.065 | 155 | 67 | 5 | 1 | 134 | 32 | 178 | 5.15e-21 | 90.1 |
MS.gene04173.t1 | AT4G13020 | 38.065 | 155 | 67 | 5 | 1 | 134 | 24 | 170 | 5.24e-21 | 89.7 |
MS.gene04173.t1 | AT4G13020 | 38.065 | 155 | 67 | 5 | 1 | 134 | 24 | 170 | 5.26e-21 | 89.4 |
MS.gene04173.t1 | AT1G18040 | 35.294 | 153 | 73 | 3 | 3 | 134 | 34 | 181 | 2.81e-20 | 87.4 |
MS.gene04173.t1 | AT5G63610 | 37.888 | 161 | 62 | 5 | 7 | 134 | 52 | 207 | 5.98e-20 | 87.0 |
MS.gene04173.t1 | AT5G45430 | 37.821 | 156 | 64 | 7 | 2 | 134 | 25 | 170 | 7.47e-20 | 86.7 |
MS.gene04173.t1 | AT5G45430 | 37.821 | 156 | 64 | 7 | 2 | 134 | 25 | 170 | 7.73e-20 | 86.7 |
MS.gene04173.t1 | AT1G71530 | 36.538 | 156 | 74 | 3 | 1 | 134 | 167 | 319 | 4.07e-19 | 84.7 |
MS.gene04173.t1 | AT1G66750 | 35.294 | 153 | 73 | 2 | 3 | 134 | 35 | 182 | 6.71e-19 | 83.2 |
MS.gene04173.t1 | AT5G44290 | 35.849 | 159 | 71 | 4 | 1 | 134 | 157 | 309 | 1.36e-18 | 83.2 |
MS.gene04173.t1 | AT4G10010 | 37.179 | 156 | 73 | 3 | 1 | 134 | 176 | 328 | 1.44e-18 | 83.2 |
MS.gene04173.t1 | AT1G71530 | 37.179 | 156 | 73 | 4 | 1 | 134 | 167 | 319 | 1.47e-18 | 82.4 |
MS.gene04173.t1 | AT1G53050 | 36.420 | 162 | 66 | 7 | 1 | 134 | 154 | 306 | 1.58e-18 | 83.2 |
MS.gene04173.t1 | AT1G53050 | 36.420 | 162 | 66 | 7 | 1 | 134 | 154 | 306 | 1.58e-18 | 83.2 |
MS.gene04173.t1 | AT1G18670 | 36.076 | 158 | 71 | 6 | 2 | 134 | 152 | 304 | 1.67e-18 | 83.2 |
MS.gene04173.t1 | AT1G71530 | 37.179 | 156 | 73 | 4 | 1 | 134 | 167 | 319 | 1.82e-18 | 82.8 |
MS.gene04173.t1 | AT1G18670 | 36.076 | 158 | 71 | 6 | 2 | 134 | 152 | 304 | 2.00e-18 | 82.8 |
MS.gene04173.t1 | AT1G71530 | 37.179 | 156 | 73 | 4 | 1 | 134 | 167 | 319 | 2.10e-18 | 82.4 |
MS.gene04173.t1 | AT1G18670 | 36.076 | 158 | 71 | 6 | 2 | 134 | 152 | 304 | 2.55e-18 | 82.4 |
MS.gene04173.t1 | AT4G13020 | 35.976 | 164 | 67 | 6 | 1 | 134 | 24 | 179 | 2.80e-18 | 82.0 |
MS.gene04173.t1 | AT5G44290 | 35.849 | 159 | 71 | 4 | 1 | 134 | 157 | 309 | 3.27e-18 | 82.4 |
MS.gene04173.t1 | AT5G44290 | 35.849 | 159 | 71 | 4 | 1 | 134 | 157 | 309 | 3.27e-18 | 82.4 |
MS.gene04173.t1 | AT5G44290 | 35.849 | 159 | 71 | 4 | 1 | 134 | 157 | 309 | 3.27e-18 | 82.4 |
MS.gene04173.t1 | AT5G44290 | 35.849 | 159 | 71 | 4 | 1 | 134 | 157 | 309 | 3.27e-18 | 82.4 |
MS.gene04173.t1 | AT5G44290 | 35.849 | 159 | 71 | 4 | 1 | 134 | 157 | 309 | 3.27e-18 | 82.4 |
MS.gene04173.t1 | AT5G64960 | 36.552 | 145 | 59 | 3 | 23 | 134 | 15 | 159 | 3.62e-18 | 82.0 |
MS.gene04173.t1 | AT4G13020 | 35.976 | 164 | 67 | 6 | 1 | 134 | 24 | 179 | 4.02e-18 | 81.3 |
MS.gene04173.t1 | AT5G44290 | 35.849 | 159 | 71 | 4 | 1 | 134 | 157 | 309 | 4.67e-18 | 81.6 |
MS.gene04173.t1 | AT1G33770 | 37.179 | 156 | 73 | 3 | 1 | 134 | 161 | 313 | 8.93e-18 | 80.9 |
MS.gene04173.t1 | AT1G03740 | 35.948 | 153 | 73 | 3 | 4 | 134 | 236 | 385 | 1.24e-17 | 80.5 |
MS.gene04173.t1 | AT1G76540 | 35.443 | 158 | 76 | 3 | 3 | 134 | 36 | 193 | 1.39e-17 | 79.3 |
MS.gene04173.t1 | AT4G22940 | 36.709 | 158 | 66 | 7 | 4 | 134 | 126 | 276 | 1.46e-17 | 80.5 |
MS.gene04173.t1 | AT1G03740 | 35.948 | 153 | 73 | 3 | 4 | 134 | 236 | 385 | 1.54e-17 | 80.5 |
MS.gene04173.t1 | AT4G22940 | 35.294 | 153 | 75 | 3 | 4 | 134 | 126 | 276 | 1.73e-17 | 80.1 |
MS.gene04173.t1 | AT5G50860 | 38.158 | 152 | 65 | 7 | 7 | 134 | 140 | 286 | 8.75e-17 | 78.2 |
MS.gene04173.t1 | AT5G50860 | 37.179 | 156 | 69 | 7 | 3 | 134 | 136 | 286 | 9.20e-17 | 77.8 |
MS.gene04173.t1 | AT1G20930 | 34.177 | 158 | 78 | 3 | 3 | 134 | 38 | 195 | 2.33e-16 | 75.9 |
MS.gene04173.t1 | AT5G39420 | 34.356 | 163 | 68 | 7 | 1 | 134 | 125 | 277 | 2.46e-16 | 76.6 |
MS.gene04173.t1 | AT4G10010 | 38.000 | 150 | 68 | 3 | 7 | 134 | 2 | 148 | 2.64e-16 | 76.6 |
MS.gene04173.t1 | AT2G38620 | 33.136 | 169 | 74 | 4 | 3 | 134 | 26 | 192 | 3.49e-16 | 75.5 |
MS.gene04173.t1 | AT1G74330 | 34.591 | 159 | 73 | 7 | 2 | 134 | 142 | 295 | 4.20e-16 | 76.3 |
MS.gene04173.t1 | AT2G38620 | 33.136 | 169 | 74 | 4 | 3 | 134 | 26 | 192 | 4.36e-16 | 74.3 |
MS.gene04173.t1 | AT2G38620 | 33.136 | 169 | 74 | 4 | 3 | 134 | 26 | 192 | 4.36e-16 | 74.3 |
MS.gene04173.t1 | AT1G74330 | 34.591 | 159 | 73 | 7 | 2 | 134 | 142 | 295 | 5.57e-16 | 75.9 |
MS.gene04173.t1 | AT1G74330 | 34.591 | 159 | 73 | 7 | 2 | 134 | 142 | 295 | 5.81e-16 | 75.9 |
MS.gene04173.t1 | AT1G54610 | 36.076 | 158 | 72 | 6 | 1 | 134 | 138 | 290 | 1.44e-15 | 74.7 |
MS.gene04173.t1 | AT1G54610 | 36.076 | 158 | 72 | 6 | 1 | 134 | 138 | 290 | 1.44e-15 | 74.7 |
MS.gene04173.t1 | AT1G54610 | 36.076 | 158 | 72 | 6 | 1 | 134 | 138 | 290 | 1.44e-15 | 74.7 |
MS.gene04173.t1 | AT3G05050 | 35.065 | 154 | 75 | 3 | 3 | 134 | 160 | 310 | 1.45e-15 | 74.7 |
MS.gene04173.t1 | AT3G05050 | 35.065 | 154 | 75 | 3 | 3 | 134 | 160 | 310 | 1.45e-15 | 74.7 |
MS.gene04173.t1 | AT3G05050 | 35.065 | 154 | 75 | 3 | 3 | 134 | 160 | 310 | 1.45e-15 | 74.7 |
MS.gene04173.t1 | AT1G57700 | 37.342 | 158 | 70 | 4 | 1 | 134 | 166 | 318 | 1.58e-15 | 74.3 |
MS.gene04173.t1 | AT4G19110 | 39.167 | 120 | 43 | 5 | 37 | 134 | 3 | 114 | 3.01e-15 | 73.6 |
MS.gene04173.t1 | AT1G09600 | 38.217 | 157 | 70 | 6 | 1 | 134 | 183 | 335 | 3.52e-15 | 73.6 |
MS.gene04173.t1 | AT3G54180 | 31.325 | 166 | 81 | 4 | 2 | 134 | 25 | 190 | 1.16e-14 | 71.2 |
MS.gene04173.t1 | AT4G18710 | 33.742 | 163 | 69 | 7 | 1 | 134 | 60 | 212 | 3.90e-14 | 70.1 |
MS.gene04173.t1 | AT4G18710 | 33.742 | 163 | 69 | 7 | 1 | 134 | 54 | 206 | 4.27e-14 | 69.3 |
MS.gene04173.t1 | AT1G50240 | 30.357 | 168 | 91 | 6 | 3 | 153 | 28 | 186 | 9.79e-14 | 69.3 |
MS.gene04173.t1 | AT1G50240 | 30.357 | 168 | 91 | 6 | 3 | 153 | 28 | 186 | 9.79e-14 | 69.3 |
MS.gene04173.t1 | AT1G57870 | 32.919 | 161 | 71 | 7 | 2 | 134 | 103 | 254 | 3.74e-13 | 67.4 |
MS.gene04173.t1 | AT1G57870 | 32.919 | 161 | 71 | 7 | 2 | 134 | 103 | 254 | 3.74e-13 | 67.4 |
MS.gene04173.t1 | AT1G57870 | 32.919 | 161 | 71 | 7 | 2 | 134 | 103 | 254 | 3.74e-13 | 67.4 |
MS.gene04173.t1 | AT3G01085 | 31.677 | 161 | 75 | 4 | 1 | 134 | 135 | 287 | 4.42e-13 | 67.4 |
MS.gene04173.t1 | AT3G01085 | 31.677 | 161 | 75 | 4 | 1 | 134 | 135 | 287 | 4.42e-13 | 67.4 |
MS.gene04173.t1 | AT2G25090 | 30.709 | 127 | 70 | 3 | 1 | 109 | 35 | 161 | 4.57e-13 | 67.4 |
MS.gene04173.t1 | AT1G57870 | 32.919 | 161 | 71 | 7 | 2 | 134 | 103 | 254 | 4.99e-13 | 67.0 |
MS.gene04173.t1 | AT3G01085 | 31.677 | 161 | 75 | 4 | 1 | 134 | 135 | 287 | 5.56e-13 | 67.0 |
MS.gene04173.t1 | AT5G25110 | 33.987 | 153 | 81 | 6 | 1 | 134 | 63 | 214 | 5.89e-13 | 67.0 |
MS.gene04173.t1 | AT2G30980 | 31.902 | 163 | 72 | 7 | 1 | 134 | 92 | 244 | 6.95e-13 | 66.6 |
MS.gene04173.t1 | AT1G06390 | 32.099 | 162 | 73 | 7 | 1 | 134 | 90 | 242 | 7.59e-13 | 66.6 |
MS.gene04173.t1 | AT1G06390 | 32.099 | 162 | 73 | 7 | 1 | 134 | 90 | 242 | 7.59e-13 | 66.6 |
MS.gene04173.t1 | AT5G45820 | 32.680 | 153 | 85 | 4 | 1 | 135 | 32 | 184 | 1.10e-12 | 66.2 |
MS.gene04173.t1 | AT3G61160 | 31.481 | 162 | 74 | 7 | 1 | 134 | 122 | 274 | 1.25e-12 | 65.9 |
MS.gene04173.t1 | AT3G61160 | 31.481 | 162 | 74 | 7 | 1 | 134 | 122 | 274 | 1.30e-12 | 65.9 |
MS.gene04173.t1 | AT3G61160 | 31.481 | 162 | 74 | 7 | 1 | 134 | 122 | 274 | 1.37e-12 | 65.5 |
MS.gene04173.t1 | AT3G61160 | 31.481 | 162 | 74 | 7 | 1 | 134 | 129 | 281 | 1.37e-12 | 65.9 |
MS.gene04173.t1 | AT3G61160 | 31.481 | 162 | 74 | 7 | 1 | 134 | 129 | 281 | 1.52e-12 | 65.5 |
MS.gene04173.t1 | AT1G09840 | 32.298 | 161 | 72 | 7 | 2 | 134 | 104 | 255 | 1.54e-12 | 65.5 |
MS.gene04173.t1 | AT1G09840 | 32.298 | 161 | 72 | 7 | 2 | 134 | 104 | 255 | 1.54e-12 | 65.5 |
MS.gene04173.t1 | AT1G09840 | 32.298 | 161 | 72 | 7 | 2 | 134 | 104 | 255 | 1.54e-12 | 65.5 |
MS.gene04173.t1 | AT1G09840 | 32.298 | 161 | 72 | 7 | 2 | 134 | 104 | 255 | 1.54e-12 | 65.5 |
MS.gene04173.t1 | AT1G09840 | 32.298 | 161 | 72 | 7 | 2 | 134 | 104 | 255 | 1.54e-12 | 65.5 |
MS.gene04173.t1 | AT1G09840 | 32.298 | 161 | 72 | 7 | 2 | 134 | 104 | 255 | 1.54e-12 | 65.5 |
MS.gene04173.t1 | AT1G09840 | 32.298 | 161 | 72 | 7 | 2 | 134 | 104 | 255 | 1.54e-12 | 65.5 |
MS.gene04173.t1 | AT1G09840 | 32.298 | 161 | 72 | 7 | 2 | 134 | 104 | 255 | 1.54e-12 | 65.5 |
MS.gene04173.t1 | AT1G09840 | 32.298 | 161 | 72 | 7 | 2 | 134 | 104 | 255 | 1.54e-12 | 65.5 |
MS.gene04173.t1 | AT1G09840 | 32.298 | 161 | 72 | 7 | 2 | 134 | 104 | 255 | 1.54e-12 | 65.5 |
MS.gene04173.t1 | AT3G61160 | 31.481 | 162 | 74 | 7 | 1 | 134 | 122 | 274 | 1.62e-12 | 65.5 |
MS.gene04173.t1 | AT5G39440 | 29.310 | 174 | 86 | 7 | 3 | 153 | 41 | 200 | 4.76e-12 | 64.3 |
MS.gene04173.t1 | AT3G21220 | 32.639 | 144 | 80 | 4 | 3 | 132 | 92 | 232 | 9.01e-12 | 63.2 |
MS.gene04173.t1 | AT3G21220 | 32.639 | 144 | 80 | 4 | 3 | 132 | 92 | 232 | 9.01e-12 | 63.2 |
MS.gene04173.t1 | AT4G18700 | 33.117 | 154 | 83 | 6 | 1 | 135 | 46 | 198 | 1.30e-11 | 63.2 |
MS.gene04173.t1 | AT3G01090 | 31.250 | 160 | 72 | 7 | 3 | 135 | 64 | 212 | 3.45e-11 | 61.6 |
MS.gene04173.t1 | AT3G01090 | 30.818 | 159 | 74 | 6 | 3 | 135 | 41 | 189 | 3.50e-11 | 61.6 |
MS.gene04173.t1 | AT3G01090 | 30.818 | 159 | 74 | 6 | 3 | 135 | 41 | 189 | 3.50e-11 | 61.6 |
MS.gene04173.t1 | AT1G51660 | 35.772 | 123 | 57 | 4 | 27 | 132 | 124 | 241 | 6.99e-11 | 60.8 |
Find 37 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCTTCACATTGATGAAAAT+TGG | 0.148851 | 3.1:-44931455 | MS.gene04173:CDS |
AGAAACTTATTTGATGATTA+TGG | 0.196813 | 3.1:-44932873 | MS.gene04173:CDS |
TATCCTTAAAACTTGTTCTT+TGG | 0.250428 | 3.1:+44932760 | None:intergenic |
GTGATGCTCTGAGAACTTTA+AGG | 0.259738 | 3.1:-44932851 | MS.gene04173:CDS |
GCATTGACGTGCAGATTATC+AGG | 0.298410 | 3.1:+44931955 | None:intergenic |
ATTTGAAGATATGTAATTTC+GGG | 0.298767 | 3.1:-44931924 | MS.gene04173:CDS |
CTTGATTGCCACTTTCTCAT+TGG | 0.318091 | 3.1:+44932902 | None:intergenic |
GATTTGAAGATATGTAATTT+CGG | 0.333198 | 3.1:-44931925 | MS.gene04173:CDS |
TTAAAACTTGTTCTTTGGTC+TGG | 0.350735 | 3.1:+44932765 | None:intergenic |
TCACATAGATCAGCCATATA+TGG | 0.351435 | 3.1:+44931516 | None:intergenic |
CTCTTATTTCAGTTACTTCA+AGG | 0.366635 | 3.1:-44932024 | MS.gene04173:intron |
CGTGCAGATTATCAGGCTTC+AGG | 0.372819 | 3.1:+44931962 | None:intergenic |
TCTTCACATTGATGAAAATT+GGG | 0.390420 | 3.1:-44931454 | MS.gene04173:CDS |
TAACCGTCCTCGTCAAGTTC+CGG | 0.420344 | 3.1:-44931481 | MS.gene04173:CDS |
AGGACTCCGACATCCATATA+TGG | 0.427432 | 3.1:-44931529 | MS.gene04173:CDS |
TGAAGTTGCTTAGACATGTT+AGG | 0.446580 | 3.1:-44932824 | MS.gene04173:CDS |
ATGTAATTTCGGGCTTGCTC+GGG | 0.455061 | 3.1:-44931914 | MS.gene04173:CDS |
TATGTAATTTCGGGCTTGCT+CGG | 0.466231 | 3.1:-44931915 | MS.gene04173:CDS |
GCTCGGGAAAATCAAGTTGA+TGG | 0.468124 | 3.1:-44931898 | MS.gene04173:CDS |
TGATGCTCTGAGAACTTTAA+GGG | 0.469642 | 3.1:-44932850 | MS.gene04173:CDS |
CTACTTGGTCTATGAACTCA+TGG | 0.487653 | 3.1:-44932736 | MS.gene04173:CDS |
GATTATCAGGCTTCAGGTCC+CGG | 0.488143 | 3.1:+44931968 | None:intergenic |
ATTCTGCAAATATTCTTCAC+CGG | 0.491305 | 3.1:-44931987 | MS.gene04173:CDS |
TCATCAATGTGAAGATTGAC+CGG | 0.493486 | 3.1:+44931462 | None:intergenic |
CCACATATCGATAGAAGCTC+TGG | 0.502904 | 3.1:+44931832 | None:intergenic |
GCATTGACAAAAGCAGCGTC+AGG | 0.522223 | 3.1:+44931381 | None:intergenic |
TATGGATACCAATGAGAAAG+TGG | 0.527676 | 3.1:-44932910 | MS.gene04173:CDS |
CAGAGTATGTTGTCACGCGC+TGG | 0.554806 | 3.1:-44931864 | MS.gene04173:CDS |
TGACCGGAACTTGACGAGGA+CGG | 0.572050 | 3.1:+44931478 | None:intergenic |
TTCTGCAAATATTCTTCACC+GGG | 0.580637 | 3.1:-44931986 | MS.gene04173:CDS |
CCAGAGCTTCTATCGATATG+TGG | 0.590202 | 3.1:-44931832 | MS.gene04173:intron |
AGATTGACCGGAACTTGACG+AGG | 0.605348 | 3.1:+44931474 | None:intergenic |
TGACGAGGACGGTTACGCCA+TGG | 0.605495 | 3.1:+44931489 | None:intergenic |
AAATGATTAGAGAAATGATG+TGG | 0.608261 | 3.1:-44931425 | MS.gene04173:CDS |
GATCAGCCATATATGGATGT+CGG | 0.608682 | 3.1:+44931523 | None:intergenic |
CTGATCTATGTGATGATCCA+TGG | 0.617471 | 3.1:-44931506 | MS.gene04173:CDS |
TGACAAAAGCAGCGTCAGGA+TGG | 0.619732 | 3.1:+44931385 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTTGAAGATATGTAATTTC+GGG | - | chr3.1:44932362-44932381 | MS.gene04173:intron | 20.0% |
!! | GATTTGAAGATATGTAATTT+CGG | - | chr3.1:44932361-44932380 | MS.gene04173:intron | 20.0% |
!!! | AGAAACTTATTTGATGATTA+TGG | - | chr3.1:44931413-44931432 | MS.gene04173:CDS | 20.0% |
!!! | ATAAGAAAATTGTTTTGAAC+TGG | + | chr3.1:44932180-44932199 | None:intergenic | 20.0% |
!!! | CATTTTTTGTAACAAATCAA+TGG | + | chr3.1:44932697-44932716 | None:intergenic | 20.0% |
!!! | TGCAGTAATTTTTTTTTAGT+TGG | + | chr3.1:44932732-44932751 | None:intergenic | 20.0% |
! | AAAAAAATTACTGCATCAGA+AGG | - | chr3.1:44932737-44932756 | MS.gene04173:CDS | 25.0% |
! | AAACTAATCATAAGTGTTCT+TGG | - | chr3.1:44932552-44932571 | MS.gene04173:intron | 25.0% |
! | AAATGATTAGAGAAATGATG+TGG | - | chr3.1:44932861-44932880 | MS.gene04173:CDS | 25.0% |
! | AATCATAAAGAAATCTGTAC+AGG | + | chr3.1:44932114-44932133 | None:intergenic | 25.0% |
! | ATCTTCACATTGATGAAAAT+TGG | - | chr3.1:44932831-44932850 | MS.gene04173:CDS | 25.0% |
! | CTTATAGATTAGTGAATTCT+AGG | - | chr3.1:44931831-44931850 | MS.gene04173:intron | 25.0% |
! | TATGATTAGTAACAAACAGA+AGG | + | chr3.1:44932240-44932259 | None:intergenic | 25.0% |
! | TCTTCACATTGATGAAAATT+GGG | - | chr3.1:44932832-44932851 | MS.gene04173:CDS | 25.0% |
!! | TATCCTTAAAACTTGTTCTT+TGG | + | chr3.1:44931529-44931548 | None:intergenic | 25.0% |
!! | TGTGAACTTACATTGATTAT+TGG | - | chr3.1:44932023-44932042 | MS.gene04173:intron | 25.0% |
!!! | AAGTTTTAAGGATATCTACT+TGG | - | chr3.1:44931535-44931554 | MS.gene04173:intron | 25.0% |
!!! | CACTTATGATTAGTTTCATT+TGG | + | chr3.1:44932548-44932567 | None:intergenic | 25.0% |
AAATCACTTCCCTATACAAA+GGG | - | chr3.1:44932630-44932649 | MS.gene04173:intron | 30.0% | |
ATTCTGCAAATATTCTTCAC+CGG | - | chr3.1:44932299-44932318 | MS.gene04173:intron | 30.0% | |
GGAAAATTGTAGTTCGTAAT+AGG | + | chr3.1:44932093-44932112 | None:intergenic | 30.0% | |
GTAGTTACGTTGTATAAATG+AGG | - | chr3.1:44931860-44931879 | MS.gene04173:CDS | 30.0% | |
TCACATTAATTTCCCAACTT+GGG | + | chr3.1:44932008-44932027 | None:intergenic | 30.0% | |
TGTAACAAATCAATGGCTAA+TGG | + | chr3.1:44932690-44932709 | None:intergenic | 30.0% | |
TGTAGTTAATCCAAAAACCA+AGG | - | chr3.1:44932599-44932618 | MS.gene04173:intron | 30.0% | |
TTCACATTAATTTCCCAACT+TGG | + | chr3.1:44932009-44932028 | None:intergenic | 30.0% | |
! | AACTCTTACAGTGTTTTATG+TGG | - | chr3.1:44931686-44931705 | MS.gene04173:intron | 30.0% |
! | AGACCAAAGAACAAGTTTTA+AGG | - | chr3.1:44931523-44931542 | MS.gene04173:CDS | 30.0% |
! | AGATTAGTGAATTCTAGGAA+AGG | - | chr3.1:44931836-44931855 | MS.gene04173:CDS | 30.0% |
! | CTCTTATTTCAGTTACTTCA+AGG | - | chr3.1:44932262-44932281 | MS.gene04173:intron | 30.0% |
! | GAATTGGGAAATTTGAGTTT+AGG | - | chr3.1:44931732-44931751 | MS.gene04173:intron | 30.0% |
! | TTAAAACTTGTTCTTTGGTC+TGG | + | chr3.1:44931524-44931543 | None:intergenic | 30.0% |
AAGTGATTTGATGAACTCCT+TGG | + | chr3.1:44932619-44932638 | None:intergenic | 35.0% | |
AATCACTTCCCTATACAAAG+GGG | - | chr3.1:44932631-44932650 | MS.gene04173:intron | 35.0% | |
ACCAATCACAGACAAACTAA+AGG | + | chr3.1:44931896-44931915 | None:intergenic | 35.0% | |
CAAATCACTTCCCTATACAA+AGG | - | chr3.1:44932629-44932648 | MS.gene04173:intron | 35.0% | |
GAAAACAATTGTCCCAAGTT+GGG | - | chr3.1:44931993-44932012 | MS.gene04173:CDS | 35.0% | |
GTAGAGTTTGCAATGATCAT+TGG | + | chr3.1:44931607-44931626 | None:intergenic | 35.0% | |
TCACATAGATCAGCCATATA+TGG | + | chr3.1:44932773-44932792 | None:intergenic | 35.0% | |
TCATCAATGTGAAGATTGAC+CGG | + | chr3.1:44932827-44932846 | None:intergenic | 35.0% | |
TGAAAACAATTGTCCCAAGT+TGG | - | chr3.1:44931992-44932011 | MS.gene04173:CDS | 35.0% | |
TGAAGTTGCTTAGACATGTT+AGG | - | chr3.1:44931462-44931481 | MS.gene04173:CDS | 35.0% | |
TTCTGCAAATATTCTTCACC+GGG | - | chr3.1:44932300-44932319 | MS.gene04173:intron | 35.0% | |
TTGCAATGATCATTGGAAAG+TGG | + | chr3.1:44931600-44931619 | None:intergenic | 35.0% | |
! | ACAGTGTTTTATGTGGCATT+AGG | - | chr3.1:44931693-44931712 | MS.gene04173:intron | 35.0% |
! | CAGTGTTTTATGTGGCATTA+GGG | - | chr3.1:44931694-44931713 | MS.gene04173:intron | 35.0% |
! | GGAAGAACTTAGTGTTGAAT+TGG | - | chr3.1:44931794-44931813 | MS.gene04173:intron | 35.0% |
!! | GATTAGTTTCATTTGGTGCA+TGG | + | chr3.1:44932541-44932560 | None:intergenic | 35.0% |
!! | TCCTTTAGTTTGTCTGTGAT+TGG | - | chr3.1:44931892-44931911 | MS.gene04173:CDS | 35.0% |
!! | TGATGCTCTGAGAACTTTAA+GGG | - | chr3.1:44931436-44931455 | MS.gene04173:CDS | 35.0% |
!! | TTGATGAACTCCTTGGTTTT+TGG | + | chr3.1:44932612-44932631 | None:intergenic | 35.0% |
AAGAGTCCAACTATGTCAGT+AGG | + | chr3.1:44931934-44931953 | None:intergenic | 40.0% | |
AAGTGTGTCCCCTTTGTATA+GGG | + | chr3.1:44932642-44932661 | None:intergenic | 40.0% | |
ATCATTGGAAAGTGGCTTAG+AGG | + | chr3.1:44931592-44931611 | None:intergenic | 40.0% | |
CAAACTCAAGATCAGACTCT+TGG | + | chr3.1:44932581-44932600 | None:intergenic | 40.0% | |
CTACTTGGTCTATGAACTCA+TGG | - | chr3.1:44931550-44931569 | MS.gene04173:intron | 40.0% | |
CTCAGCAAAAATGCATCCAA+CGG | + | chr3.1:44932481-44932500 | None:intergenic | 40.0% | |
CTGATCTATGTGATGATCCA+TGG | - | chr3.1:44932780-44932799 | MS.gene04173:CDS | 40.0% | |
GATCAGCCATATATGGATGT+CGG | + | chr3.1:44932766-44932785 | None:intergenic | 40.0% | |
TAGCATCCTACTGACATAGT+TGG | - | chr3.1:44931925-44931944 | MS.gene04173:CDS | 40.0% | |
TTGCAAACTCTACTTAGCTC+AGG | - | chr3.1:44931614-44931633 | MS.gene04173:intron | 40.0% | |
! | TATGTAATTTCGGGCTTGCT+CGG | - | chr3.1:44932371-44932390 | MS.gene04173:intron | 40.0% |
! | TGCATTTTTGCTGAGATGCT+TGG | - | chr3.1:44932486-44932505 | MS.gene04173:intron | 40.0% |
!! | CTTGATTGCCACTTTCTCAT+TGG | + | chr3.1:44931387-44931406 | None:intergenic | 40.0% |
!! | GTGATGCTCTGAGAACTTTA+AGG | - | chr3.1:44931435-44931454 | MS.gene04173:CDS | 40.0% |
!!! | GGTGCATGGAATTTTTTCCA+GGG | + | chr3.1:44932527-44932546 | None:intergenic | 40.0% |
!!! | TGGTGCATGGAATTTTTTCC+AGG | + | chr3.1:44932528-44932547 | None:intergenic | 40.0% |
AGGACTCCGACATCCATATA+TGG | - | chr3.1:44932757-44932776 | MS.gene04173:CDS | 45.0% | |
CCACATATCGATAGAAGCTC+TGG | + | chr3.1:44932457-44932476 | None:intergenic | 45.0% | |
CCAGAGCTTCTATCGATATG+TGG | - | chr3.1:44932454-44932473 | MS.gene04173:intron | 45.0% | |
GAAGTGTGTCCCCTTTGTAT+AGG | + | chr3.1:44932643-44932662 | None:intergenic | 45.0% | |
GGTAGAAAGCAAATCTTCCC+TGG | - | chr3.1:44932507-44932526 | MS.gene04173:intron | 45.0% | |
TCTATCGATATGTGGTCCGT+TGG | - | chr3.1:44932462-44932481 | MS.gene04173:intron | 45.0% | |
! | ATGGCTAATGGATCTGCTTG+TGG | + | chr3.1:44932678-44932697 | None:intergenic | 45.0% |
! | ATGTAATTTCGGGCTTGCTC+GGG | - | chr3.1:44932372-44932391 | MS.gene04173:intron | 45.0% |
! | CAGGTGGGTTTCAAGGAATT+GGG | - | chr3.1:44931717-44931736 | MS.gene04173:intron | 45.0% |
! | GCATTGACGTGCAGATTATC+AGG | + | chr3.1:44932334-44932353 | None:intergenic | 45.0% |
! | GTTTTATGTGGCATTAGGGC+AGG | - | chr3.1:44931698-44931717 | MS.gene04173:intron | 45.0% |
! | TGGCTAATGGATCTGCTTGT+GGG | + | chr3.1:44932677-44932696 | None:intergenic | 45.0% |
!! | GCTCGGGAAAATCAAGTTGA+TGG | - | chr3.1:44932388-44932407 | MS.gene04173:intron | 45.0% |
AGATTGACCGGAACTTGACG+AGG | + | chr3.1:44932815-44932834 | None:intergenic | 50.0% | |
CGTGCAGATTATCAGGCTTC+AGG | + | chr3.1:44932327-44932346 | None:intergenic | 50.0% | |
GATTATCAGGCTTCAGGTCC+CGG | + | chr3.1:44932321-44932340 | None:intergenic | 50.0% | |
TAACCGTCCTCGTCAAGTTC+CGG | - | chr3.1:44932805-44932824 | MS.gene04173:CDS | 50.0% | |
TATGTGGCATTAGGGCAGGT+GGG | - | chr3.1:44931702-44931721 | MS.gene04173:intron | 50.0% | |
TGACAAAAGCAGCGTCAGGA+TGG | + | chr3.1:44932904-44932923 | None:intergenic | 50.0% | |
TTATGTGGCATTAGGGCAGG+TGG | - | chr3.1:44931701-44931720 | MS.gene04173:intron | 50.0% | |
! | ATTAGGGCAGGTGGGTTTCA+AGG | - | chr3.1:44931710-44931729 | MS.gene04173:intron | 50.0% |
! | GCAGGTGGGTTTCAAGGAAT+TGG | - | chr3.1:44931716-44931735 | MS.gene04173:intron | 50.0% |
! | GCATTGACAAAAGCAGCGTC+AGG | + | chr3.1:44932908-44932927 | None:intergenic | 50.0% |
!! | GAGTGCATGAAGTGCTGAGT+CGG | - | chr3.1:44931773-44931792 | MS.gene04173:intron | 50.0% |
CAGAGTATGTTGTCACGCGC+TGG | - | chr3.1:44932422-44932441 | MS.gene04173:intron | 55.0% | |
TGACCGGAACTTGACGAGGA+CGG | + | chr3.1:44932811-44932830 | None:intergenic | 55.0% | |
TGACGAGGACGGTTACGCCA+TGG | + | chr3.1:44932800-44932819 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 44931377 | 44932931 | 44931377 | ID=MS.gene04173 |
chr3.1 | mRNA | 44931377 | 44932931 | 44931377 | ID=MS.gene04173.t1;Parent=MS.gene04173 |
chr3.1 | exon | 44932722 | 44932931 | 44932722 | ID=MS.gene04173.t1.exon1;Parent=MS.gene04173.t1 |
chr3.1 | CDS | 44932722 | 44932931 | 44932722 | ID=cds.MS.gene04173.t1;Parent=MS.gene04173.t1 |
chr3.1 | exon | 44931833 | 44932034 | 44931833 | ID=MS.gene04173.t1.exon2;Parent=MS.gene04173.t1 |
chr3.1 | CDS | 44931833 | 44932034 | 44931833 | ID=cds.MS.gene04173.t1;Parent=MS.gene04173.t1 |
chr3.1 | exon | 44931377 | 44931552 | 44931377 | ID=MS.gene04173.t1.exon3;Parent=MS.gene04173.t1 |
chr3.1 | CDS | 44931377 | 44931552 | 44931377 | ID=cds.MS.gene04173.t1;Parent=MS.gene04173.t1 |
Gene Sequence |
Protein sequence |