AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene041777

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041777.t1 MTR_1g095570 94.359 1684 62 6 1 1680 1 1655 0.0 3194
MS.gene041777.t1 MTR_1g095570 93.291 1252 51 6 433 1680 1 1223 0.0 2380
MS.gene041777.t1 MTR_6g033340 49.084 764 336 17 1 736 1 739 0.0 628
MS.gene041777.t1 MTR_6g033350 52.310 606 252 12 721 1303 1 592 1.15e-160 508
MS.gene041777.t1 MTR_6g033350 40.936 171 63 7 1378 1526 595 749 1.63e-18 92.4
MS.gene041777.t1 MTR_6g033345 47.934 242 120 5 894 1130 1 241 3.34e-46 167
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041777.t1 AT3G52250 36.872 1055 579 29 129 1149 228 1229 2.48e-159 529
MS.gene041777.t1 AT3G52250 45.614 171 83 7 1 164 1 168 2.16e-31 135
MS.gene041777.t1 AT3G52250 38.514 148 62 8 1389 1529 1479 1604 5.15e-12 72.0
MS.gene041777.t1 AT3G52250 36.872 1055 579 29 129 1149 228 1229 2.48e-159 529
MS.gene041777.t1 AT3G52250 45.614 171 83 7 1 164 1 168 2.16e-31 135
MS.gene041777.t1 AT3G52250 38.514 148 62 8 1389 1529 1479 1604 5.15e-12 72.0

Find 424 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCAGTCTGTTTGACCTTT+TGG 0.147569 1.1:-68907629 None:intergenic
AAAACGGTTTGAAAGATTTA+AGG 0.182155 1.1:+68904397 MS.gene041777:CDS
ACGGTTTCCGAGGGTTCTTC+TGG 0.182952 1.1:+68907072 MS.gene041777:CDS
TCCTACATCATCTTCCAATT+TGG 0.198327 1.1:+68908016 MS.gene041777:CDS
GAAAGAAGCCTAGGCTTAAT+TGG 0.205176 1.1:+68902076 MS.gene041777:CDS
GAACATCAGCTTCCTCTTTC+CGG 0.208467 1.1:+68907489 MS.gene041777:CDS
CTGCATTTGGAAAAGATTTC+CGG 0.212447 1.1:+68905870 MS.gene041777:CDS
TCTGAAAATCCTGTAACTTT+TGG 0.231138 1.1:-68902234 None:intergenic
TTGAAGAAATTTGCTGCATT+TGG 0.231426 1.1:+68905857 MS.gene041777:CDS
CTTCAGGCTGTATCATCTTT+TGG 0.233706 1.1:+68906493 MS.gene041777:CDS
GTCCTCTACTTGTGATATTC+AGG 0.238661 1.1:+68907425 MS.gene041777:CDS
TCCACAAGTTCAGCCATTTA+TGG 0.251864 1.1:+68908172 MS.gene041777:CDS
CAAATGCCGTTCACTATTCT+TGG 0.252464 1.1:-68908066 None:intergenic
TCAAGGGTTGTTTGAATATA+GGG 0.252482 1.1:-68906375 None:intergenic
AGGCGTGGATGATAAATTAT+TGG 0.260719 1.1:+68903437 MS.gene041777:intron
TTGACTGGAAGCCGCTTAAA+TGG 0.260978 1.1:+68901860 MS.gene041777:CDS
CTGGGGCATCTTCACTGTAT+TGG 0.262238 1.1:-68903907 None:intergenic
CTTCGCTTCGCAGTCAAAAT+AGG 0.263813 1.1:-68907759 None:intergenic
CAGTGATGAGTTATGGTTAT+TGG 0.265739 1.1:+68907898 MS.gene041777:CDS
TGGGGCATCTTCACTGTATT+GGG 0.273880 1.1:-68903906 None:intergenic
TGTTGACTCCTTGAATAGTT+TGG 0.276071 1.1:+68903566 MS.gene041777:CDS
GAAGATGCCTGCATTAATAT+TGG 0.290191 1.1:+68905712 MS.gene041777:CDS
CAAATTGGGCTTTCCTTCAT+AGG 0.299329 1.1:-68901962 None:intergenic
AATGCTTTGTCCGCTGTAAT+AGG 0.300408 1.1:+68904108 MS.gene041777:CDS
GTTGACTCCTTGAATAGTTT+GGG 0.303473 1.1:+68903567 MS.gene041777:CDS
GAAAATAAGCATGTCTCCTT+TGG 0.304458 1.1:+68907291 MS.gene041777:CDS
GTCAAGGGTTGTTTGAATAT+AGG 0.304984 1.1:-68906376 None:intergenic
CTTGATTATCAGATGTTTAG+AGG 0.307171 1.1:+68908140 MS.gene041777:CDS
CTATTAATAAGTTGCTGATA+TGG 0.326043 1.1:+68903661 MS.gene041777:CDS
GAAAATATGGCAGGAGTAGT+AGG 0.326814 1.1:+68901566 MS.gene041777:CDS
CGATCCCAAGGCAATGGTTC+TGG 0.330566 1.1:-68900967 None:intergenic
GGTGTCAATGGGTTGGGAAC+AGG 0.330991 1.1:+68901802 MS.gene041777:CDS
GTCCCTTTGGGCAGAGAGAT+TGG 0.336105 1.1:+68901602 MS.gene041777:CDS
AGAAACGTTTACAATGTTCT+TGG 0.336514 1.1:-68906558 None:intergenic
ATATGCGCCTACTGTCTATT+AGG 0.342728 1.1:+68904471 MS.gene041777:CDS
TCATGTTCAGGATTGAGTTT+TGG 0.342826 1.1:+68907264 MS.gene041777:CDS
ATGTCATTGCAGGTAATAAA+AGG 0.343646 1.1:+68906116 MS.gene041777:CDS
AACATCAGCTTCCTCTTTCC+GGG 0.343768 1.1:+68907490 MS.gene041777:CDS
AGTGATGAGTTATGGTTATT+GGG 0.344144 1.1:+68907899 MS.gene041777:CDS
ATCTTTGTCAACAACACATT+GGG 0.345105 1.1:-68907142 None:intergenic
TGTTGGACATCAACCATAAA+TGG 0.346605 1.1:-68908185 None:intergenic
CGGTTTCCGAGGGTTCTTCT+GGG 0.347689 1.1:+68907073 MS.gene041777:CDS
GGTTTCGTCTGCTGGTAATA+TGG 0.348787 1.1:+68902170 MS.gene041777:CDS
CCTGTGGTCAATTCATGTTC+AGG 0.350434 1.1:+68907252 MS.gene041777:CDS
TCACGGGGTGATGGAAAATA+TGG 0.350524 1.1:+68901553 MS.gene041777:CDS
GGAAGATTCCTTCTGGGATA+TGG 0.350979 1.1:+68906145 MS.gene041777:CDS
AGGAAAGATGTTGGTAAGCT+AGG 0.352515 1.1:+68905986 MS.gene041777:CDS
TCCACCAATTCTGACAAGTA+TGG 0.354865 1.1:+68908383 MS.gene041777:CDS
GATACGAGGAAGATTCCTTC+TGG 0.357872 1.1:+68906138 MS.gene041777:CDS
ACCACCATACTTGTCAGAAT+TGG 0.361162 1.1:-68908387 None:intergenic
GGCGTGGATGATAAATTATT+GGG 0.361765 1.1:+68903438 MS.gene041777:intron
GATAAAAGCCCAAAAGTTAC+AGG 0.362840 1.1:+68902225 MS.gene041777:CDS
ACTGCTGTTGAGTCGCATTC+AGG 0.363531 1.1:+68902000 MS.gene041777:CDS
CAGCAATGGTTCTCCGAATC+TGG 0.364374 1.1:+68901645 MS.gene041777:CDS
GGCTCTGATGTTAGTGGAGT+TGG 0.365232 1.1:+68906925 MS.gene041777:CDS
TCAGTCAATGGAGTTGGCTT+GGG 0.365440 1.1:+68906973 MS.gene041777:CDS
CTTCAGTTTCTCAAAACATT+CGG 0.369777 1.1:-68905963 None:intergenic
TTGTTGGAACCAAGCTTAGA+TGG 0.371390 1.1:-68905622 None:intergenic
GATCCATGTTCTGACGATTC+TGG 0.371975 1.1:+68903621 MS.gene041777:CDS
TCACCGAGATTTCAATCGTT+GGG 0.372835 1.1:+68901068 MS.gene041777:CDS
GTCATGGTTATGGTGTTTCT+CGG 0.379599 1.1:+68901488 MS.gene041777:CDS
TGCGGCCTCCTCGCCAGATT+CGG 0.380223 1.1:-68901658 None:intergenic
AGCTGACATTTCGAAGGTAT+TGG 0.381521 1.1:+68903686 MS.gene041777:CDS
TGGTGGCTGTTGCTCCAAAT+TGG 0.382082 1.1:-68908030 None:intergenic
CAAATCATTATGGCATTCTT+CGG 0.383357 1.1:+68907659 MS.gene041777:CDS
CTACAGGTAGTTCGCACATT+TGG 0.385695 1.1:-68904527 None:intergenic
GATAATAGAGGAGGTCCCTT+TGG 0.386002 1.1:+68901589 MS.gene041777:CDS
TGCAGCTAAAACTAACTTGA+TGG 0.386341 1.1:+68906018 MS.gene041777:CDS
ATGAATAGCGTTGGAAGGCC+TGG 0.388096 1.1:+68908296 MS.gene041777:CDS
CATTTGCATCATCATTCAAC+GGG 0.388299 1.1:-68906645 None:intergenic
AAAGAAGCCTAGGCTTAATT+GGG 0.388409 1.1:+68902077 MS.gene041777:CDS
GCGAAGCGAAGTGAAGAAAA+TGG 0.390029 1.1:+68907771 MS.gene041777:CDS
AACGGGGATCCGTTAATTCC+AGG 0.391422 1.1:-68906628 None:intergenic
GCAACGGAAGATGGAGTTGC+AGG 0.391696 1.1:-68902267 None:intergenic
ATCTACCAAGTTGGGGCTGA+TGG 0.391811 1.1:-68902205 None:intergenic
CCGCTTAAATGGACCCGATC+TGG 0.394661 1.1:+68901871 MS.gene041777:CDS
TGGTCGGCCGTTGGTTTCAC+GGG 0.394681 1.1:+68901537 MS.gene041777:CDS
AGGTTGGGTGATGTTACCTT+TGG 0.397131 1.1:+68904188 MS.gene041777:CDS
TCAGCATTCTGTGAAATATC+AGG 0.398068 1.1:-68906400 None:intergenic
TGCTGGGAGCCCGATGCTAC+TGG 0.398205 1.1:-68903789 None:intergenic
GCTAAGACGGGTGGTGTCAA+TGG 0.398998 1.1:+68901790 MS.gene041777:CDS
GGAGCAACAGCCACCATTGC+AGG 0.399343 1.1:+68908037 MS.gene041777:CDS
CAAAGTTCATATCTAGTAAT+GGG 0.400546 1.1:+68905756 MS.gene041777:CDS
TTCAGTCAATGGAGTTGGCT+TGG 0.405379 1.1:+68906972 MS.gene041777:CDS
CGTTCACGGTTTACTTTCCC+TGG 0.406845 1.1:+68904578 MS.gene041777:CDS
GAATTCTCTCTATCACATCT+TGG 0.407470 1.1:-68901826 None:intergenic
TCTTTGTTTGATCCTGGATC+AGG 0.408096 1.1:-68902141 None:intergenic
TGTTAGAGATGATGAATCTT+GGG 0.408557 1.1:+68908424 MS.gene041777:CDS
GGAGTGTGGTTCTGTTGCTT+TGG 0.409009 1.1:+68907044 MS.gene041777:CDS
GAAACGTTTACAATGTTCTT+GGG 0.410705 1.1:-68906557 None:intergenic
GAAGAGCCTGGTCATGGTTA+TGG 0.412010 1.1:+68901478 MS.gene041777:CDS
AGGTGTATTGACATCATTAC+AGG 0.412605 1.1:-68904150 None:intergenic
TTCTGAAGGTCATGGTAAGC+AGG 0.412638 1.1:+68901435 MS.gene041777:intron
GATGAATCTTGGGGAGGGAA+AGG 0.415709 1.1:+68908434 MS.gene041777:CDS
AACCCCATACCTGGAATTAA+CGG 0.417746 1.1:+68906619 MS.gene041777:CDS
CCTTCCTTGCTGCTGCAAGC+TGG 0.418008 1.1:-68908261 None:intergenic
GATGGCTCGGTTTCGTCTGC+TGG 0.419173 1.1:+68902162 MS.gene041777:CDS
ACATTCTTTGGGAACTAACT+TGG 0.419764 1.1:-68904300 None:intergenic
ATGGTCGGCCGTTGGTTTCA+CGG 0.422035 1.1:+68901536 MS.gene041777:CDS
GAGCCATCTTTGTTTGATCC+TGG 0.423467 1.1:-68902147 None:intergenic
ATGGTCATTTCAAATCATTA+TGG 0.423776 1.1:+68907649 MS.gene041777:CDS
ACTTGTTCAACTTGGGATGA+TGG 0.425123 1.1:-68907797 None:intergenic
AGCTTGTCTTCTCGAGGCTC+AGG 0.425759 1.1:+68901895 MS.gene041777:CDS
GTTTCCTTGTTACCATCTAC+AGG 0.428077 1.1:-68906334 None:intergenic
TGAGACTGTTAGTGTTCTCC+AGG 0.428385 1.1:+68907521 MS.gene041777:CDS
TTATCTTAACCTTGATAAGT+TGG 0.430042 1.1:+68903542 MS.gene041777:CDS
AATGGTGATGTGAAACTGTT+TGG 0.430857 1.1:+68907702 MS.gene041777:CDS
AAATTAATAATCTCTGTTGT+TGG 0.431752 1.1:-68905638 None:intergenic
ATCAATTGAACTTGTTATGC+AGG 0.433645 1.1:-68906311 None:intergenic
GTGGTTGATGCTGATAAGTC+TGG 0.434207 1.1:+68906715 MS.gene041777:CDS
AGTTCAATTGATCCTGTAGA+TGG 0.436874 1.1:+68906322 MS.gene041777:CDS
AGCAAGACTCGGAAATGTCT+TGG 0.437017 1.1:+68906583 MS.gene041777:CDS
ACCATAAATGGCTGAACTTG+TGG 0.437682 1.1:-68908173 None:intergenic
ATAATAGAGGAGGTCCCTTT+GGG 0.438287 1.1:+68901590 MS.gene041777:CDS
ACCGATCTTCCATTCGTTCA+CGG 0.438862 1.1:+68904564 MS.gene041777:CDS
TGCTGCTGCAGCTGATGTAT+TGG 0.439293 1.1:+68906249 MS.gene041777:CDS
TTGACTGATTCACCTGCTCC+TGG 0.441023 1.1:+68903495 MS.gene041777:CDS
TTGTTAGAGATGATGAATCT+TGG 0.442358 1.1:+68908423 MS.gene041777:CDS
ATGAATCTTGGGGAGGGAAA+GGG 0.443546 1.1:+68908435 MS.gene041777:CDS
CTGCAGTTGTCTTGTGATCA+AGG 0.444878 1.1:-68905907 None:intergenic
GACAAGTCTGGTTCAGTCAA+TGG 0.447114 1.1:+68906961 MS.gene041777:CDS
TCTCAAAACATTCGGATTTG+TGG 0.447544 1.1:-68905955 None:intergenic
ACGGGTGGTGTCAATGGGTT+GGG 0.447912 1.1:+68901796 MS.gene041777:CDS
TGAAGAGCCCAAACTATTCA+AGG 0.448312 1.1:-68903574 None:intergenic
CTGACGATTCTGGTCTAGTT+CGG 0.448966 1.1:+68903631 MS.gene041777:CDS
GATAAATTATTGGGGAAGGC+TGG 0.449258 1.1:+68903447 MS.gene041777:CDS
GAGGGAAAGGGGACTTAGGC+AGG 0.449466 1.1:+68908447 MS.gene041777:CDS
GGAAAGATGTTGGTAAGCTA+GGG 0.450009 1.1:+68905987 MS.gene041777:CDS
GTGGGTGAGAGGAATATGTT+GGG 0.452807 1.1:-68901717 None:intergenic
AGTAGCTCGAGGAGCATGGC+TGG 0.453210 1.1:+68901931 MS.gene041777:CDS
AAAACTAACTTGATGGCATC+AGG 0.454263 1.1:+68906025 MS.gene041777:CDS
GAACTGCAGGCAACGGAAGA+TGG 0.455019 1.1:-68902276 None:intergenic
AGAAGACAAGCTTCCAGATC+GGG 0.458937 1.1:-68901884 None:intergenic
ATTCTTTGAGTTCAATTGAC+TGG 0.459365 1.1:+68901845 MS.gene041777:CDS
CGTTGGCTATTGAGAAAGAA+AGG 0.460426 1.1:+68905792 MS.gene041777:CDS
CAGATTCGGAGAACCATTGC+TGG 0.462288 1.1:-68901644 None:intergenic
CTGCTGTTGAGTCGCATTCA+GGG 0.462388 1.1:+68902001 MS.gene041777:CDS
GCTCGTAGCTTCCAGAGGAT+TGG 0.462557 1.1:-68906794 None:intergenic
ACTGTCTATGAGTGATCTTC+AGG 0.462908 1.1:+68907332 MS.gene041777:CDS
GTGATGGCAGATGTCATTGC+AGG 0.463020 1.1:+68906106 MS.gene041777:CDS
GGATCGTAAGGACTTCTTCA+AGG 0.463484 1.1:+68900984 MS.gene041777:CDS
CAGTTTCTTCAAGTGATACC+AGG 0.465844 1.1:+68904033 MS.gene041777:CDS
GCAGCAAGGAAGGGGAATGA+TGG 0.468489 1.1:+68908271 MS.gene041777:CDS
ATTCATTTAATTTAGCAGAC+AGG 0.468724 1.1:-68906816 None:intergenic
AGGATCGTGCAGCGGTGTCT+CGG 0.469170 1.1:+68908331 MS.gene041777:CDS
AATTCTCTCTATCACATCTT+GGG 0.470279 1.1:-68901825 None:intergenic
ATCCCCAACGATTGAAATCT+CGG 0.472130 1.1:-68901071 None:intergenic
TGGAAGGCCTGGGATTCTAG+TGG 0.478834 1.1:+68908307 MS.gene041777:CDS
CCAGCTTGCAGCAGCAAGGA+AGG 0.479058 1.1:+68908261 MS.gene041777:CDS
GACGGGTGGTGTCAATGGGT+TGG 0.479711 1.1:+68901795 MS.gene041777:CDS
CTTGTTCAACTTGGGATGAT+GGG 0.480542 1.1:-68907796 None:intergenic
GACAAGTATGGTGGTCAAAA+CGG 0.480761 1.1:+68908395 MS.gene041777:CDS
AGAATACATCTTGTCGGTGT+TGG 0.482064 1.1:-68908202 None:intergenic
GGATCCGTTAATTCCAGGTA+TGG 0.483446 1.1:-68906623 None:intergenic
CCGTTGGTTTCACGGGGTGA+TGG 0.483991 1.1:+68901544 MS.gene041777:CDS
GCCGCCAGAACCATTGCCTT+GGG 0.484019 1.1:+68900963 MS.gene041777:CDS
CAAACTTATGTTCTAGCTAC+GGG 0.485314 1.1:+68904213 MS.gene041777:CDS
AATTTAGAAGTTGCTGATCC+AGG 0.485527 1.1:-68903984 None:intergenic
ATTAGAAGACTTGTTCAACT+TGG 0.486586 1.1:-68907805 None:intergenic
TTGACACTCTTGGGGATGAA+AGG 0.487394 1.1:+68906221 MS.gene041777:CDS
ATCTCAGTGTCCAGTAGCAT+CGG 0.487814 1.1:+68903779 MS.gene041777:CDS
TTCTGTTGCTTTGGATAGAA+CGG 0.488429 1.1:+68907053 MS.gene041777:CDS
TTCATCATGGAATGTATTCA+AGG 0.488797 1.1:-68906770 None:intergenic
ATGAGTTATGGTTATTGGGA+AGG 0.489537 1.1:+68907903 MS.gene041777:CDS
GTTTCCTCTTCGACCCCAAA+AGG 0.490290 1.1:+68907614 MS.gene041777:CDS
TGCCGCCAGAACCATTGCCT+TGG 0.491813 1.1:+68900962 MS.gene041777:CDS
ACCATACTTGTCAGAATTGG+TGG 0.492167 1.1:-68908384 None:intergenic
GGTTATGGTGTTTCTCGGTC+CGG 0.492761 1.1:+68901493 MS.gene041777:CDS
AGCTAACAAGAAAGAAGAAT+CGG 0.492798 1.1:-68907967 None:intergenic
TGCTACATAAATTAGTTGAC+TGG 0.493083 1.1:-68903926 None:intergenic
ACAAAGTTCATATCTAGTAA+TGG 0.493234 1.1:+68905755 MS.gene041777:CDS
AAGCTAGGCTCTGATGTTAG+TGG 0.494092 1.1:+68906919 MS.gene041777:CDS
TTGAACTGCTATCTGCCTGC+TGG 0.495512 1.1:-68903806 None:intergenic
TGTGGGTGAGAGGAATATGT+TGG 0.496870 1.1:-68901718 None:intergenic
AATAGTGAACGGCATTTGAC+TGG 0.496893 1.1:+68908071 MS.gene041777:CDS
TGACACTCTTGGGGATGAAA+GGG 0.497560 1.1:+68906222 MS.gene041777:CDS
ATCACCGAGATTTCAATCGT+TGG 0.498754 1.1:+68901067 MS.gene041777:CDS
ATACGAGGAAGATTCCTTCT+GGG 0.499616 1.1:+68906139 MS.gene041777:CDS
ATTCTGAGTGGAAGATGGAT+TGG 0.500553 1.1:-68907736 None:intergenic
GTTCTTCATATTACTGCTAC+AGG 0.501063 1.1:-68904543 None:intergenic
AAAGTTGATGTACCTGATCC+AGG 0.501734 1.1:+68902129 MS.gene041777:CDS
GAGATGATGAATCTTGGGGA+GGG 0.502192 1.1:+68908429 MS.gene041777:CDS
TGAATAGCGTTGGAAGGCCT+GGG 0.502795 1.1:+68908297 MS.gene041777:CDS
GATCCGTTAATTCCAGGTAT+GGG 0.503607 1.1:-68906622 None:intergenic
AGTAGCATCGGGCTCCCAGC+AGG 0.503651 1.1:+68903791 MS.gene041777:CDS
TATTAATGCAGGCATCTTCA+AGG 0.504328 1.1:-68905708 None:intergenic
CATCTTTGTCAACAACACAT+TGG 0.504959 1.1:-68907143 None:intergenic
AGGCGGTCGGCTGCGAAACT+CGG 0.504960 1.1:-68901097 None:intergenic
ATGGTAATGTAAAAGCATCA+AGG 0.505302 1.1:+68906164 MS.gene041777:CDS
ATGTGAGAAAACAGTTAGCC+AGG 0.506100 1.1:+68907395 MS.gene041777:CDS
GGTTAAGATAAAACTTCTGC+AGG 0.506275 1.1:-68903530 None:intergenic
CCATGATGAATCCAATCCTC+TGG 0.507935 1.1:+68906783 MS.gene041777:CDS
AGAACATAAGTTTGCTCCAA+AGG 0.508399 1.1:-68904204 None:intergenic
GCTGCAGCTGATGTATTGGC+TGG 0.508616 1.1:+68906253 MS.gene041777:CDS
CTCCAATCTCTCTGCCCAAA+GGG 0.509486 1.1:-68901604 None:intergenic
AATCTTGAAAACCCCATACC+TGG 0.511274 1.1:+68906610 MS.gene041777:CDS
TACAGAAGTAAAGGATAGGT+TGG 0.511708 1.1:+68904172 MS.gene041777:CDS
AAGTCTCTCAGAAGGTCATT+CGG 0.514342 1.1:+68903850 MS.gene041777:CDS
TGGGGAGGGAAAGGGGACTT+AGG 0.514968 1.1:+68908443 MS.gene041777:CDS
TGAATCTTGGGGAGGGAAAG+GGG 0.515480 1.1:+68908436 MS.gene041777:CDS
AACAGTCTCAACATGGCTCC+CGG 0.515507 1.1:-68907508 None:intergenic
TCGGTCCGGCGACAAGATGT+TGG 0.517924 1.1:+68901507 MS.gene041777:CDS
GTTTCCGAGGGTTCTTCTGG+GGG 0.518112 1.1:+68907075 MS.gene041777:CDS
TTGTGCACAACTGACAAGTC+TGG 0.519383 1.1:+68906949 MS.gene041777:CDS
TTCTCGTCCAATATTAATGC+AGG 0.519652 1.1:-68905719 None:intergenic
TCCTCTACTTGTGATATTCA+GGG 0.519734 1.1:+68907426 MS.gene041777:CDS
GTCTCTAAAATCTGAATCTG+TGG 0.520565 1.1:+68903752 MS.gene041777:CDS
AGCTTGCAGCAGCAAGGAAG+GGG 0.521568 1.1:+68908263 MS.gene041777:CDS
TCTCAGAGAATACATCTTGT+CGG 0.522774 1.1:-68908208 None:intergenic
AAGTAGAGGACAGTCGATCC+TGG 0.523476 1.1:-68907413 None:intergenic
CTAGAAGTTGCATCTTCAGA+CGG 0.523948 1.1:-68902054 None:intergenic
TGAGTTATGGTTATTGGGAA+GGG 0.524318 1.1:+68907904 MS.gene041777:CDS
TTAGAAGACTTGTTCAACTT+GGG 0.524646 1.1:-68907804 None:intergenic
GTTGCCTGCAGTTCCTCACC+AGG 0.525585 1.1:+68902285 MS.gene041777:CDS
TGCATTAATATTGGACGAGA+AGG 0.526316 1.1:+68905721 MS.gene041777:CDS
TTCTTTCCACAAGTGATGCA+AGG 0.527030 1.1:-68904447 None:intergenic
CAATACACCTACAGAAGTAA+AGG 0.527076 1.1:+68904163 MS.gene041777:CDS
AGTCAACATCCAACTTATCA+AGG 0.527155 1.1:-68903551 None:intergenic
ATAGACAGTGCTGACGTATG+AGG 0.527339 1.1:-68907318 None:intergenic
GCAACAGAACCACACTCCCT+TGG 0.527610 1.1:-68907039 None:intergenic
GGGGCTATGATAACTTATCA+AGG 0.527951 1.1:+68904054 MS.gene041777:CDS
CAATAACCATAACTCATCAC+TGG 0.528467 1.1:-68907897 None:intergenic
TGCAGGAGATTCTGAAAACC+AGG 0.528559 1.1:-68903513 None:intergenic
ATTAATGTTGAATCTAAGCT+AGG 0.529004 1.1:+68906904 MS.gene041777:CDS
GAGTTTCGCAGCCGACCGCC+TGG 0.529360 1.1:+68901099 MS.gene041777:CDS
GGTTTCCGAGGGTTCTTCTG+GGG 0.530133 1.1:+68907074 MS.gene041777:CDS
CTGTGAAATATCAGGTGTCA+AGG 0.530637 1.1:-68906392 None:intergenic
ACCATTGCCTTGGGATCGTA+AGG 0.532809 1.1:+68900972 MS.gene041777:CDS
GACAAGATGTTGGAGGAAGA+TGG 0.532959 1.1:+68901517 MS.gene041777:CDS
GTCAATGGAGTTGGCTTGGG+AGG 0.533146 1.1:+68906976 MS.gene041777:CDS
TCAAAGCCTTGCATCACTTG+TGG 0.533178 1.1:+68904441 MS.gene041777:CDS
TCTGGTTCAGTCAATGGAGT+TGG 0.533428 1.1:+68906967 MS.gene041777:CDS
GCCTAGGCTTAATTGGGGCG+AGG 0.533789 1.1:+68902083 MS.gene041777:CDS
CAGCAACTTATTAATAGCAC+TGG 0.534289 1.1:-68903655 None:intergenic
CCAGAGGATTGGATTCATCA+TGG 0.534328 1.1:-68906783 None:intergenic
ATAGGATTCTGAGTGGAAGA+TGG 0.534964 1.1:-68907741 None:intergenic
CGGTTGGCTCCGTGGCGAGA+TGG 0.535502 1.1:+68901031 MS.gene041777:CDS
CCGTTCACTATTCTTGGCAA+AGG 0.535805 1.1:-68908060 None:intergenic
AACATTAATTGCACAAACAA+CGG 0.536070 1.1:-68906890 None:intergenic
GTTAAACATATAGCAGATGC+AGG 0.536991 1.1:+68907165 MS.gene041777:CDS
ATTGGACGAGAAGGAGAAGA+TGG 0.537020 1.1:+68905730 MS.gene041777:CDS
GCAAACTTATGTTCTAGCTA+CGG 0.537028 1.1:+68904212 MS.gene041777:CDS
TCTTTCTCTTCTGATGTCCA+AGG 0.537333 1.1:-68905827 None:intergenic
GAAGCACGAAAGGTCTGAAT+CGG 0.537437 1.1:+68901011 MS.gene041777:CDS
ATCCGTTAATTCCAGGTATG+GGG 0.537624 1.1:-68906621 None:intergenic
ACCGTGAACGAATGGAAGAT+CGG 0.538465 1.1:-68904565 None:intergenic
GAAGAGGATATCGATAGTCC+TGG 0.538876 1.1:+68903966 MS.gene041777:CDS
AGCTGGAAACCATCTAAGCT+TGG 0.539705 1.1:+68905613 MS.gene041777:intron
AAAGAAGAATCGGTCAAGGA+TGG 0.539791 1.1:-68907957 None:intergenic
GGAGGAAGATGGTCGGCCGT+TGG 0.540003 1.1:+68901528 MS.gene041777:CDS
GAAAGACCAGCATGCTAAGA+CGG 0.540480 1.1:+68901777 MS.gene041777:CDS
AGGAGTAGTAGGGATAATAG+AGG 0.540574 1.1:+68901577 MS.gene041777:CDS
CAGCAAGGAAGGGGAATGAT+GGG 0.541066 1.1:+68908272 MS.gene041777:CDS
TGAACTGCTATCTGCCTGCT+GGG 0.541534 1.1:-68903805 None:intergenic
GCTGGGACAGATTCCTATGA+AGG 0.541730 1.1:+68901949 MS.gene041777:CDS
TCAACATGGCTCCCGGAAAG+AGG 0.542615 1.1:-68907501 None:intergenic
AAAATATGGCAGGAGTAGTA+GGG 0.544190 1.1:+68901567 MS.gene041777:CDS
TGGTAATGTAAAAGCATCAA+GGG 0.544738 1.1:+68906165 MS.gene041777:CDS
CCATTTGCATCATCATTCAA+CGG 0.545135 1.1:-68906646 None:intergenic
TGCTCATTATTCATATCTTG+CGG 0.545208 1.1:-68901676 None:intergenic
GAGATTGGAGAGGTCATTCG+TGG 0.545466 1.1:+68901617 MS.gene041777:CDS
TTGGCAAAGGCCTGCAATGG+TGG 0.545722 1.1:-68908047 None:intergenic
GTTCATATCTAGTAATGGGC+TGG 0.546102 1.1:+68905760 MS.gene041777:CDS
TTCCTCCAACATCTTGTCGC+CGG 0.549490 1.1:-68901512 None:intergenic
AAACTGAAGAGGAAAGATGT+TGG 0.549660 1.1:+68905977 MS.gene041777:CDS
TATTCAAGGCATCAGAAGGC+AGG 0.549966 1.1:-68906756 None:intergenic
CACCACCCGTCTTAGCATGC+TGG 0.550683 1.1:-68901783 None:intergenic
AAAGGGGTACGATCAATCCT+TGG 0.550923 1.1:+68905810 MS.gene041777:CDS
GTTGGCTATTGAGAAAGAAA+GGG 0.551049 1.1:+68905793 MS.gene041777:CDS
ACAGAAGTAAAGGATAGGTT+GGG 0.552164 1.1:+68904173 MS.gene041777:CDS
AAAGACCAGCATGCTAAGAC+GGG 0.552821 1.1:+68901778 MS.gene041777:CDS
GAAAGTAAACCGTGAACGAA+TGG 0.553046 1.1:-68904573 None:intergenic
GATATGCGGTGTCATAGCTC+TGG 0.553528 1.1:+68907456 MS.gene041777:CDS
TCTCAGTGTCCAGTAGCATC+GGG 0.555774 1.1:+68903780 MS.gene041777:CDS
AGATTCTGAAAACCAGGAGC+AGG 0.555784 1.1:-68903507 None:intergenic
GCACCTGCATGGAATAGCCC+TGG 0.557999 1.1:-68907539 None:intergenic
TAGTTCCATCAGCCCCAACT+TGG 0.558863 1.1:+68902200 MS.gene041777:CDS
ATGATGGGAATGAATAGCGT+TGG 0.559006 1.1:+68908287 MS.gene041777:CDS
CTTTCTTTCTCAATAGCCAA+CGG 0.560032 1.1:-68905791 None:intergenic
TTTACAGCTAGAGACATGAA+TGG 0.560221 1.1:+68908104 MS.gene041777:CDS
TCATGAAAATGACAAGGAAG+AGG 0.560363 1.1:+68903950 MS.gene041777:CDS
GGAAGGCCTGGGATTCTAGT+GGG 0.564767 1.1:+68908308 MS.gene041777:CDS
GATGTATTGGCTGGTATATG+TGG 0.564852 1.1:+68906262 MS.gene041777:CDS
CCTAGGCTTAATTGGGGCGA+GGG 0.565007 1.1:+68902084 MS.gene041777:CDS
TCTCCAGGGCTATTCCATGC+AGG 0.565245 1.1:+68907536 MS.gene041777:CDS
CTAAGACGGGTGGTGTCAAT+GGG 0.566536 1.1:+68901791 MS.gene041777:CDS
CCAGATCGGGTCCATTTAAG+CGG 0.567623 1.1:-68901871 None:intergenic
ATTTGTTGAGCCTCTGCCGT+TGG 0.567900 1.1:+68904004 MS.gene041777:CDS
AACGTTTCTTCAGCAAGACT+CGG 0.568747 1.1:+68906572 MS.gene041777:CDS
AATGTTCCAGTGATGAGTTA+TGG 0.569272 1.1:+68907891 MS.gene041777:CDS
TTGGATAGAACGGTTTCCGA+GGG 0.569559 1.1:+68907063 MS.gene041777:CDS
GTCTTGGAAATGAAGTGGAA+AGG 0.569665 1.1:+68907103 MS.gene041777:CDS
GCGTTTACAAAATCAGAATG+TGG 0.570995 1.1:-68901736 None:intergenic
CAGCTTGCAGCAGCAAGGAA+GGG 0.571221 1.1:+68908262 MS.gene041777:CDS
GCTACATAAATTAGTTGACT+GGG 0.571883 1.1:-68903925 None:intergenic
GGATAATTACTAAACGCAGC+AGG 0.572186 1.1:-68907996 None:intergenic
AAAATCAGAATGTGGGTGAG+AGG 0.572324 1.1:-68901728 None:intergenic
CAGATGTTTAGAGGTAGAGA+TGG 0.572342 1.1:+68908149 MS.gene041777:CDS
CATACCTGGTGAGGAACTGC+AGG 0.572791 1.1:-68902289 None:intergenic
GAGAAGACAAGCTTCCAGAT+CGG 0.573380 1.1:-68901885 None:intergenic
TTCAGAAATAATTAAACCAA+GGG 0.573712 1.1:+68907023 MS.gene041777:CDS
CTCAAGTAGCTCGAGGAGCA+TGG 0.574631 1.1:+68901927 MS.gene041777:CDS
CACGAAAGGTCTGAATCGGT+TGG 0.575571 1.1:+68901015 MS.gene041777:CDS
ATCTCCAGCTTGCAGCAGCA+AGG 0.576061 1.1:+68908257 MS.gene041777:CDS
GGATGATAAATTATTGGGGA+AGG 0.576556 1.1:+68903443 MS.gene041777:CDS
GATCCTCCCACTAGAATCCC+AGG 0.576654 1.1:-68908314 None:intergenic
TGATAAGTTATCATAGCCCC+TGG 0.578026 1.1:-68904051 None:intergenic
GATCCAGGATCAAACAAAGA+TGG 0.579395 1.1:+68902144 MS.gene041777:CDS
AAGAAGAATCGGTCAAGGAT+GGG 0.580034 1.1:-68907956 None:intergenic
TGTCATAGCTCTGGTAGTAA+TGG 0.581340 1.1:+68907465 MS.gene041777:CDS
TCTTTGTCTTGGAAATGAAG+TGG 0.581912 1.1:+68907098 MS.gene041777:CDS
CATTCGTGGGAGGCCAGCAA+TGG 0.581955 1.1:+68901631 MS.gene041777:CDS
CGTTTACAAAATCAGAATGT+GGG 0.582506 1.1:-68901735 None:intergenic
CCCTCGCCCCAATTAAGCCT+AGG 0.583891 1.1:-68902084 None:intergenic
GTAGCTCGAGGAGCATGGCT+GGG 0.584317 1.1:+68901932 MS.gene041777:CDS
TTGCACAATCAATGTATGAG+AGG 0.584557 1.1:-68904360 None:intergenic
GTCATGGTAAGCAGGGTGGT+TGG 0.584666 1.1:+68901443 MS.gene041777:CDS
GTCCGGCGACAAGATGTTGG+AGG 0.584756 1.1:+68901510 MS.gene041777:CDS
TCCTTACGATCCCAAGGCAA+TGG 0.584959 1.1:-68900973 None:intergenic
TCAAGGAGAGGAAGCACGAA+AGG 0.585365 1.1:+68901001 MS.gene041777:CDS
TCTCCAATCTCTCTGCCCAA+AGG 0.586606 1.1:-68901605 None:intergenic
TTCTTGGCAAAGGCCTGCAA+TGG 0.587230 1.1:-68908050 None:intergenic
GTCTGAATCGGTTGGCTCCG+TGG 0.588923 1.1:+68901023 MS.gene041777:CDS
CAACTTCTAGAAAGAAGCCT+AGG 0.590054 1.1:+68902067 MS.gene041777:CDS
TTACATTACCATATCCCAGA+AGG 0.590383 1.1:-68906153 None:intergenic
CGGTGTCTCGGATCCTGTGG+CGG 0.590515 1.1:+68908343 MS.gene041777:CDS
GATGCATGTGTTGTTGAGGC+AGG 0.590672 1.1:+68906688 MS.gene041777:CDS
GGGGTGATGGAAAATATGGC+AGG 0.591231 1.1:+68901557 MS.gene041777:CDS
CCATCACCCCGTGAAACCAA+CGG 0.591923 1.1:-68901544 None:intergenic
AGATTGGAGAGGTCATTCGT+GGG 0.591957 1.1:+68901618 MS.gene041777:CDS
CACCGAGATTTCAATCGTTG+GGG 0.593291 1.1:+68901069 MS.gene041777:CDS
AGGATCAAACAAAGATGGCT+CGG 0.595068 1.1:+68902149 MS.gene041777:CDS
AGAGATGATGAATCTTGGGG+AGG 0.596236 1.1:+68908428 MS.gene041777:CDS
TGTAAAAGCATCAAGGGGCG+AGG 0.596661 1.1:+68906171 MS.gene041777:CDS
TCTGAAGGTCATGGTAAGCA+GGG 0.597082 1.1:+68901436 MS.gene041777:intron
AAATGTTTCATTCTCACCTG+TGG 0.598857 1.1:+68907236 MS.gene041777:CDS
AGACCAGAATCGTCAGAACA+TGG 0.599268 1.1:-68903624 None:intergenic
TGGGCTGGTTGAAGATCCGT+TGG 0.599359 1.1:+68905775 MS.gene041777:CDS
TCCCAAGGCAATGGTTCTGG+CGG 0.600227 1.1:-68900964 None:intergenic
CTTCAGAAATAATTAAACCA+AGG 0.600296 1.1:+68907022 MS.gene041777:CDS
AACCTATCCTTTACTTCTGT+AGG 0.600634 1.1:-68904170 None:intergenic
ACTGCATTTACCAACGGCAG+AGG 0.601116 1.1:-68904014 None:intergenic
TTTGGATAGAACGGTTTCCG+AGG 0.601407 1.1:+68907062 MS.gene041777:CDS
TCCCTGAATATCACAAGTAG+AGG 0.605259 1.1:-68907427 None:intergenic
GCGTGTTGAAGTCTCTCAGA+AGG 0.606141 1.1:+68903842 MS.gene041777:CDS
GACAGGCTCGTAGCTTCCAG+AGG 0.607368 1.1:-68906799 None:intergenic
TGTGAAATATCAGGTGTCAA+GGG 0.607676 1.1:-68906391 None:intergenic
TGGTGAGGAACTGCAGGCAA+CGG 0.608204 1.1:-68902283 None:intergenic
CCGTTGAATGATGATGCAAA+TGG 0.612103 1.1:+68906646 MS.gene041777:CDS
AATGTATTCAAGGCATCAGA+AGG 0.612851 1.1:-68906760 None:intergenic
ATAATTAAACCAAGGGAGTG+TGG 0.613524 1.1:+68907030 MS.gene041777:CDS
GCGAAGATATCACAGTGTGT+AGG 0.615357 1.1:+68906526 MS.gene041777:CDS
CAGCGGTGTCTCGGATCCTG+TGG 0.615518 1.1:+68908340 MS.gene041777:CDS
TCTGGAAGCTTGTCTTCTCG+AGG 0.616741 1.1:+68901889 MS.gene041777:CDS
TGCTGTTGAGTCGCATTCAG+GGG 0.617927 1.1:+68902002 MS.gene041777:CDS
TTTGAGTGCTGCTTCAGTGA+TGG 0.619670 1.1:+68906090 MS.gene041777:CDS
ATGAATCAAGAGAAATCAGT+GGG 0.621536 1.1:+68906833 MS.gene041777:CDS
CAAAAGGTCAAACAGACTGA+TGG 0.622931 1.1:+68907630 MS.gene041777:CDS
AGTAGTAGGGATAATAGAGG+AGG 0.623417 1.1:+68901580 MS.gene041777:CDS
CAAGAAAGAAGAATCGGTCA+AGG 0.624330 1.1:-68907961 None:intergenic
GGCATTTCCTAATAGACAGT+AGG 0.627767 1.1:-68904478 None:intergenic
AAGAAGTCCTTACGATCCCA+AGG 0.628497 1.1:-68900979 None:intergenic
GAGACTGTTAGTGTTCTCCA+GGG 0.628665 1.1:+68907522 MS.gene041777:CDS
TCCAAATTGGAAGATGATGT+AGG 0.628761 1.1:-68908017 None:intergenic
GAAGAAACTGCATTTACCAA+CGG 0.629023 1.1:-68904020 None:intergenic
AGTTTCTTCAAGTGATACCA+GGG 0.630530 1.1:+68904034 MS.gene041777:CDS
TGATCCTGTAGATGGTAACA+AGG 0.631294 1.1:+68906330 MS.gene041777:CDS
ATGGAAAGCTGACATTTCGA+AGG 0.635530 1.1:+68903680 MS.gene041777:CDS
CACCTACAGAAGTAAAGGAT+AGG 0.637651 1.1:+68904168 MS.gene041777:CDS
CCTGAACATGAATTGACCAC+AGG 0.638814 1.1:-68907252 None:intergenic
GTAAGGACTTCTTCAAGGAG+AGG 0.639071 1.1:+68900989 MS.gene041777:CDS
TGGGAATGAATAGCGTTGGA+AGG 0.639308 1.1:+68908291 MS.gene041777:CDS
ATGGTTCTCCGAATCTGGCG+AGG 0.639536 1.1:+68901650 MS.gene041777:CDS
GGGCTATGATAACTTATCAA+GGG 0.641049 1.1:+68904055 MS.gene041777:CDS
AGAATCTCTCCATCTCGCCA+CGG 0.641414 1.1:-68901040 None:intergenic
GCTACACAACATACCTGGTG+AGG 0.641555 1.1:-68902298 None:intergenic
GTTAGAGATGATGAATCTTG+GGG 0.642876 1.1:+68908425 MS.gene041777:CDS
CCGGAAACTAACCAGGCGGT+CGG 0.644361 1.1:-68901110 None:intergenic
AGAAGATGTCACACATGCAG+TGG 0.646177 1.1:-68902028 None:intergenic
TTGGGGCTGATGGAACTACA+AGG 0.647188 1.1:-68902195 None:intergenic
AGTGGAAAGGCAAAGAGTGT+CGG 0.648218 1.1:+68907116 MS.gene041777:CDS
AGATGTTGGAGGAAGATGGT+CGG 0.648607 1.1:+68901521 MS.gene041777:CDS
GGTCGGCCGTTGGTTTCACG+GGG 0.649865 1.1:+68901538 MS.gene041777:CDS
TGTTGTTGAGGCAGGCTCAG+TGG 0.652601 1.1:+68906696 MS.gene041777:CDS
CGGTCGGCTGCGAAACTCGG+CGG 0.653759 1.1:-68901094 None:intergenic
TAAGTCACTCAAGTAGCTCG+AGG 0.655086 1.1:+68901920 MS.gene041777:CDS
GAAACACCATAACCATGACC+AGG 0.655883 1.1:-68901484 None:intergenic
GTTCTCCGAATCTGGCGAGG+AGG 0.658080 1.1:+68901653 MS.gene041777:CDS
TTGGAGAGGTCATTCGTGGG+AGG 0.658095 1.1:+68901621 MS.gene041777:CDS
ACCAATTCTGACAAGTATGG+TGG 0.661106 1.1:+68908386 MS.gene041777:CDS
ATGTCTTGAAAATGTAGATG+TGG 0.663001 1.1:+68906864 MS.gene041777:CDS
AAGATATGAATAATGAGCAG+AGG 0.665208 1.1:+68901680 MS.gene041777:CDS
TGACGTATGAGGCTTTCCAA+AGG 0.666473 1.1:-68907307 None:intergenic
AGATGATGCATGTGTTGTTG+AGG 0.666528 1.1:+68906684 MS.gene041777:CDS
TTGGCTATTGAGAAAGAAAG+GGG 0.666838 1.1:+68905794 MS.gene041777:CDS
GTATTGACATCATTACAGGC+AGG 0.667009 1.1:-68904146 None:intergenic
AATGAATCAAGAGAAATCAG+TGG 0.670379 1.1:+68906832 MS.gene041777:CDS
AAGAAGCCTAGGCTTAATTG+GGG 0.672278 1.1:+68902078 MS.gene041777:CDS
GAACACTAACAGTCTCAACA+TGG 0.675115 1.1:-68907515 None:intergenic
GACCAGCATGCTAAGACGGG+TGG 0.676227 1.1:+68901781 MS.gene041777:CDS
GTCTGGAAATAAAACAGACG+AGG 0.684383 1.1:+68906732 MS.gene041777:CDS
GCGTGGATGATAAATTATTG+GGG 0.684514 1.1:+68903439 MS.gene041777:CDS
CTACATAAATTAGTTGACTG+GGG 0.688710 1.1:-68903924 None:intergenic
ACTTGTTCAGATGAGAGCTG+CGG 0.689285 1.1:+68906430 MS.gene041777:CDS
GAAGGTCATGGTAAGCAGGG+TGG 0.689827 1.1:+68901439 MS.gene041777:intron
TCTTTGTCAACAACACATTG+GGG 0.691202 1.1:-68907141 None:intergenic
CCTTTGCCAAGAATAGTGAA+CGG 0.691999 1.1:+68908060 MS.gene041777:CDS
TAGCATTCATGAAAATGACA+AGG 0.692115 1.1:+68903944 MS.gene041777:CDS
CTAGTGGGAGGATCGTGCAG+CGG 0.694460 1.1:+68908323 MS.gene041777:CDS
TTCAGGGAGGTAGAGATATG+CGG 0.697830 1.1:+68907442 MS.gene041777:CDS
GTTTCTTCAAGTGATACCAG+GGG 0.700136 1.1:+68904035 MS.gene041777:CDS
GCAGGTAATAAAAGGATACG+AGG 0.700512 1.1:+68906124 MS.gene041777:CDS
AGGCCTGGGATTCTAGTGGG+AGG 0.700557 1.1:+68908311 MS.gene041777:CDS
GGTAATGTAAAAGCATCAAG+GGG 0.700735 1.1:+68906166 MS.gene041777:CDS
GCAATACAAAGTAGACAGTG+TGG 0.701084 1.1:+68907930 MS.gene041777:CDS
AAGTATGGTGGTCAAAACGG+AGG 0.720416 1.1:+68908398 MS.gene041777:CDS
GCTGCGGCGAAGCTACTGAG+TGG 0.721566 1.1:+68906446 MS.gene041777:CDS
TCTACTTGTGATATTCAGGG+AGG 0.726623 1.1:+68907429 MS.gene041777:CDS
AAACTTATGTTCTAGCTACG+GGG 0.733759 1.1:+68904214 MS.gene041777:CDS
TTTGGGCAGAGAGATTGGAG+AGG 0.734229 1.1:+68901607 MS.gene041777:CDS
TTGAATGATGATGCAAATGG+CGG 0.738271 1.1:+68906649 MS.gene041777:CDS
TGGGTGAGAGGAATATGTTG+GGG 0.738277 1.1:-68901716 None:intergenic
AGTCAAAATAGGATTCTGAG+TGG 0.758621 1.1:-68907748 None:intergenic
ATTTGCATCATCATTCAACG+GGG 0.778394 1.1:-68906644 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr1.1 gene 68900961 68908472 68900961 ID=MS.gene041777
chr1.1 mRNA 68900961 68908472 68900961 ID=MS.gene041777.t1;Parent=MS.gene041777
chr1.1 exon 68900961 68901120 68900961 ID=MS.gene041777.t1.exon1;Parent=MS.gene041777.t1
chr1.1 CDS 68900961 68901120 68900961 ID=cds.MS.gene041777.t1;Parent=MS.gene041777.t1
chr1.1 exon 68901443 68902306 68901443 ID=MS.gene041777.t1.exon2;Parent=MS.gene041777.t1
chr1.1 CDS 68901443 68902306 68901443 ID=cds.MS.gene041777.t1;Parent=MS.gene041777.t1
chr1.1 exon 68903439 68904599 68903439 ID=MS.gene041777.t1.exon3;Parent=MS.gene041777.t1
chr1.1 CDS 68903439 68904599 68903439 ID=cds.MS.gene041777.t1;Parent=MS.gene041777.t1
chr1.1 exon 68905615 68908472 68905615 ID=MS.gene041777.t1.exon4;Parent=MS.gene041777.t1
chr1.1 CDS 68905615 68908472 68905615 ID=cds.MS.gene041777.t1;Parent=MS.gene041777.t1
Gene Sequence

>MS.gene041777

ATGCCGCCAGAACCATTGCCTTGGGATCGTAAGGACTTCTTCAAGGAGAGGAAGCACGAAAGGTCTGAATCGGTTGGCTCCGTGGCGAGATGGAGAGATTCTTCTCATCACCGAGATTTCAATCGTTGGGGATCCGCCGAGTTTCGCAGCCGACCGCCTGGTTAGTTTCCGGTTCTCCGCTCTCTTCCGATTCGTTATCTATGCTTTTGTTTAGTTTTTGCAGAAATTTGTTATTAGGTTTTGTTATTCTCTGCGTATTTGATATATTGTTGAAAATTTGAAACTGAAACCTGCGTTTAATTTTGAAGATCTGTGGCTATAGTTGTTTTCTTTAAGCTTTTTAAGAGAGGAGAGAATTTTTTGCAAGATTTCTTTGTTCTATTTTGTGTTTTTTTTTTCTTCTCTTTTTTGTGGGTAGGAATATATACTTTGCTTGTGTTAATTTTTTTCTGTTTTCCTTTTTGTTCAAATATTTTCTGAAGGTCATGGTAAGCAGGGTGGTTGGCACATGTTTTCTGAAGAGCCTGGTCATGGTTATGGTGTTTCTCGGTCCGGCGACAAGATGTTGGAGGAAGATGGTCGGCCGTTGGTTTCACGGGGTGATGGAAAATATGGCAGGAGTAGTAGGGATAATAGAGGAGGTCCCTTTGGGCAGAGAGATTGGAGAGGTCATTCGTGGGAGGCCAGCAATGGTTCTCCGAATCTGGCGAGGAGGCCGCAAGATATGAATAATGAGCAGAGGTCAGTTGATGATTCCCCAACATATTCCTCTCACCCACATTCTGATTTTGTAAACGCTTGGGAGCAGCATAACTTGAAAGACCAGCATGCTAAGACGGGTGGTGTCAATGGGTTGGGAACAGGCCCAAGATGTGATAGAGAGAATTCTTTGAGTTCAATTGACTGGAAGCCGCTTAAATGGACCCGATCTGGAAGCTTGTCTTCTCGAGGCTCAGGTTTAAGTCACTCAAGTAGCTCGAGGAGCATGGCTGGGACAGATTCCTATGAAGGAAAGCCCAATTTGAAACACAAAAATGTCACTGCTGTTGAGTCGCATTCAGGGGAAGCCACTGCATGTGTGACATCTTCTATGCCGTCTGAAGATGCAACTTCTAGAAAGAAGCCTAGGCTTAATTGGGGCGAGGGACTCGCAAAGTACGAGAAGAAAAAAGTTGATGTACCTGATCCAGGATCAAACAAAGATGGCTCGGTTTCGTCTGCTGGTAATATGGAGCCTTGTAGTTCCATCAGCCCCAACTTGGTAGATAAAAGCCCAAAAGTTACAGGATTTTCAGACTGTGCATCTCCTGCAACTCCATCTTCCGTTGCCTGCAGTTCCTCACCAGGTATGTTGTGTAGCTTTCTTTACTACTGTGTCAGATCCTTCTGTTGTAAGAGCAAAATGACAATTTAACTTATAGAATTTACTACTAACATCTGTTTGTGCAATGATTAATGTCTTGTTGTATCACATATAGGACTGTGGTGAATCCTATTTTGCGACATTGTATTGTTTATCTTGGTGTTCGTGAATAATTGTCTGAAAGAGTAGTCAGATATTAATTGCAATACTCTTTAGTTTTCACCACTGCTTTTTTTAGTTGCAATTTTAAGATTGGATTAGGTGTCTTTTGCTTCATTGATGTTTTCCTTTAACCGTAGTGATTTTCTCTTACCCTGTTATCTATTTCTAATCATCTTCCCTTCTTAATATGTTTCTTCCATTAATAAAAAACGATTTCTTTCGTTGATGTTTCATTGTCCAGTTATCTTCGATTTTTGTTTCCATTAATTTTCACTTTTAGGATGATACGGTCTCTCAACATGCGTACTCTTAATATGCATCATTTCTTTGGCTTAATGAATTTCTTCTTTTATTGAAGAAGAGCAGGTTTGCTATGCTATTTTGTTTGAAAATGTTTTTTAGGTGTATTATTCATTTAATAAGGAAAAAAACACTTTGAGGAGTCTAAGTTGAGTGGAAATCTGTTTTGGGCATATTTAATTGATTTATGGTGTTCACTTGAACAGTTTTATTGCTGCCTTCAGTTTTCAAGTGATATTTAGATGCTGATCCTTGAACATGTATTGTGTCCCGACCTCTGCTTTTAAAACTAGGTAGTTTGAATAGGAAAATTGTACCTCAGGATATATCTTCTACAAACGGATTTCTATTTCGAGATAACTTGTCGAATAGAATGGTTGAACAAGGTCAATCTACTGACAGTTATTAGACTATTTGTTCTTAATTGTAAATATGGTTTGACATGATCTCCTATAATTATTAAAACTATTGTTTTGGTCTCTTTATACTCTTACTTTGGCACAATAATTTTTCCCCGAGCTTAGACGAGAGATGATAATTTTGATTTCTCATTTGATTTTCCTGTCATAGCAATTGATGTATTACATGTACTGCTTGTGTTTACCCTGCATATATTATTTTTATGCCAAAACCTAACTTCAACCTTATTGCAGGCGTGGATGATAAATTATTGGGGAAGGCTGGAAATGCAGACAATGATGTCAGTAATTTGACTGATTCACCTGCTCCTGGTTTTCAGAATCTCCTGCAGAAGTTTTATCTTAACCTTGATAAGTTGGATGTTGACTCCTTGAATAGTTTGGGCTCTTCAATTGTTGAGTTAGTACAGTCTGATGATCCATGTTCTGACGATTCTGGTCTAGTTCGGACCAGTGCTATTAATAAGTTGCTGATATGGAAAGCTGACATTTCGAAGGTATTGGAGATGACTGAATCTGAAATTGATTTGCTTGAAAATGAACTGAAGTCTCTAAAATCTGAATCTGTGGATAGATCTCAGTGTCCAGTAGCATCGGGCTCCCAGCAGGCAGATAGCAGTTCAAAGTTTTACGAACAGCGTGTTGAAGTCTCTCAGAAGGTCATTCGGCCAGTACCATTGAAAATTATTTCTTCTGATGAACCCAATACAGTGAAGATGCCCCAGTCAACTAATTTATGTAGCATTCATGAAAATGACAAGGAAGAGGATATCGATAGTCCTGGATCAGCAACTTCTAAATTTGTTGAGCCTCTGCCGTTGGTAAATGCAGTTTCTTCAAGTGATACCAGGGGCTATGATAACTTATCAAGGGACATGAATGCTGTTCAATCTACTATGATGAAATGCTTTGTCCGCTGTAATAGGAAAAATACTAGTGTACCTGCCTGTAATGATGTCAATACACCTACAGAAGTAAAGGATAGGTTGGGTGATGTTACCTTTGGAGCAAACTTATGTTCTAGCTACGGGGATACTTATAAGTCAATTATTGCTTCAAATAAAGAATCTGCAAACAGAGCGCACAAAGTATTTACCAAGTTAGTTCCCAAAGAATGTAAAAAGCATGGTAACATGGGAGTCAGCAATGATTCGTCCTCTCATACATTGATTGTGCAAAAATTTGCCGAGAAAAAACGGTTTGAAAGATTTAAGGAGAGAGTTATTGCACTCAAGTTCAAAGCCTTGCATCACTTGTGGAAAGAAGATATGCGCCTACTGTCTATTAGGAAATGCCGCCCAAGATCGCATAAGAAAAATGAACCAAATGTGCGAACTACCTGTAGCAGTAATATGAAGAACCGATCTTCCATTCGTTCACGGTTTACTTTCCCTGGTATAGATCTTTCCCCCGAATCTTTTGCTTAACTTATTCCAGTGAATGTGATTTTGCATTGTCTTTCAATTTGATGCAGTTCAGTTATGTCATGTAGTTTACGAATGAGAATAAAAGAAATAATGACAGGGTGGTTGTTGATGTACTGAAATAGGTTTGTTTATATTAAGTTTACCTAAATACTCTGTCTTAAGAGTATAAGAGCTTTGCAAAACCTTTTCAATTTGATTTTAAGACCTTTGAGAGTCGGTAAATTCTTTTAATACTTATAGTGTAAAATTGTTTACATGATTATGTGGCATATTATTTTTTGGTAAAAACAGCATAGTTAAATTATTTTCCTGTGTTTGATGTGTTGATATTATTTGGCTTTCCGTTAATTGTTATGGTGTACAGTTATTTCCGCAATTGGTTTTCATTACAACATTCTTTTGCATATTACTTTTTGGTAAATTGCCATAGTTAAATTATATTTTTGCTGTTTGATGTGATGAGGATCTATGACTCCGTAGTTGCTTTTTTGTTGTCAAATTCTGATAGAAATAATTAAATACGATCAAGTGGCTCTGTGATGCTGAGATCTCTGTCACAAGATGTGACTGTCTGTTTTTCTTTACCATGCAGCTTTTATTTTTCGTATGAAAAAAAGATTCTTTCAATTCTAATGTTCATTTTAATGCTATTTATACCTTCGACATAATATAGGGTAGATACTACTCCCTCCGGTCCTATTTATAAGAGAAATTTGGGTCAACAAAAGTGGATGTATTTGGTCCAATTTTTTAACCAGATACATTAACTTTTGTTGACCAAAATTTCTCTTATAAATAGGACCGGAGGGAGTATTATTTGACCCGGGCTTGTACAAGATGATTGTATGTAATTTTAGAGTGGTGATACCTGTGATGATGATGTTTTATTTTATAGTTGTTTGTTGAGTTCCTAAAATATCTAATCTTTTTGTTGTGATGATTACTAAGTATTTTTCTCATTCTTCATTTTCCAATGAATGCAGCTGGAAACCATCTAAGCTTGGTTCCAACAACAGAGATTATTAATTTCACAAGCAAACTTCTGTCAGAATCTCAAGCACAACTTCAGAGAAACACCTTGAAGATGCCTGCATTAATATTGGACGAGAAGGAGAAGATGGTTACAAAGTTCATATCTAGTAATGGGCTGGTTGAAGATCCGTTGGCTATTGAGAAAGAAAGGGGTACGATCAATCCTTGGACATCAGAAGAGAAAGAATTATTCTTGAAGAAATTTGCTGCATTTGGAAAAGATTTCCGGAAAATTGCTTCTTTCCTTGATCACAAGACAACTGCAGACTGCGTTGAGTTCTACTACAAGAACCACAAATCCGAATGTTTTGAGAAACTGAAGAGGAAAGATGTTGGTAAGCTAGGGAAGTCATATGCAGCTAAAACTAACTTGATGGCATCAGGTAAAAAATGGAATCATGAAGTTAATGTTTCTTCACTTGATATTTTGAGTGCTGCTTCAGTGATGGCAGATGTCATTGCAGGTAATAAAAGGATACGAGGAAGATTCCTTCTGGGATATGGTAATGTAAAAGCATCAAGGGGCGAGGACAGCATTATAGAGAGATCAAACAGTTTTGACACTCTTGGGGATGAAAGGGAGACTGCTGCTGCAGCTGATGTATTGGCTGGTATATGTGGTTCATTTTCATCTGAGGCTATGAGTTCCTGCATAACAAGTTCAATTGATCCTGTAGATGGTAACAAGGAAACGAAGTTCTTGAAAGCAAACCCTATATTCAAACAACCCTTGACACCTGATATTTCACAGAATGCTGATGATGAGACTTGTTCAGATGAGAGCTGCGGCGAAGCTACTGAGTGGACAGATGATGAGACAGCAGCTTTTCTTCAGGCTGTATCATCTTTTGGTAAGGATTTTGCGAAGATATCACAGTGTGTAGGTACAAAGACCCAAGAACATTGTAAACGTTTCTTCAGCAAGACTCGGAAATGTCTTGGATTGAATCTTGAAAACCCCATACCTGGAATTAACGGATCCCCGTTGAATGATGATGCAAATGGCGGTGAGAGTGATACAGATGATGCATGTGTTGTTGAGGCAGGCTCAGTGGTTGATGCTGATAAGTCTGGAAATAAAACAGACGAGGACCTGCCTTCTGATGCCTTGAATACATTCCATGATGAATCCAATCCTCTGGAAGCTACGAGCCTGTCTGCTAAATTAAATGAATCAAGAGAAATCAGTGGGACCGAAGTATGTCTTGAAAATGTAGATGTGGCTTCCGTTGTTTGTGCAATTAATGTTGAATCTAAGCTAGGCTCTGATGTTAGTGGAGTTGGCTTGTGCACAACTGACAAGTCTGGTTCAGTCAATGGAGTTGGCTTGGGAGGTACAGTTAGAGAATCTATTTCTGCTTCAGAAATAATTAAACCAAGGGAGTGTGGTTCTGTTGCTTTGGATAGAACGGTTTCCGAGGGTTCTTCTGGGGGTCTTTGTCTTGGAAATGAAGTGGAAAGGCAAAGAGTGTCGGCACCCCAATGTGTTGTTGACAAAGATGTTAAACATATAGCAGATGCAGGTGTTGTAGTTGAGTTGAAAAGCTGTGTCTTAGAATCGAGCACTGCAGCAAATGTTTCATTCTCACCTGTGGTCAATTCATGTTCAGGATTGAGTTTTGGTTCTGAAAATAAGCATGTCTCCTTTGGAAAGCCTCATACGTCAGCACTGTCTATGAGTGATCTTCAGGCAACTGCAAATTCATTGTTGCTAAAAACTGCCGCTGCTCAATGTGAGAAAACAGTTAGCCAGGATCGACTGTCCTCTACTTGTGATATTCAGGGAGGTAGAGATATGCGGTGTCATAGCTCTGGTAGTAATGGTGAACATCAGCTTCCTCTTTCCGGGAGCCATGTTGAGACTGTTAGTGTTCTCCAGGGCTATTCCATGCAGGTGCCCATAAAAAAAGAAGTGGATGGGGATGTGAATTGCAGCAGTTCAGCAGCTGAGTTTCCTCTTCGACCCCAAAAGGTCAAACAGACTGATGGTCATTTCAAATCATTATGGCATTCTTCGGATTCAGAAAAAACATCCAAAAATGGTGATGTGAAACTGTTTGGAAAGATATTAACCAATCCATCTTCCACTCAGAATCCTATTTTGACTGCGAAGCGAAGTGAAGAAAATGGTTCCCATCATCCCAAGTTGAACAAGTCTTCTAATCTGAATTTTACTGGCCATCAAAATTCTGATGAAAATTTAAAATTTTTGAAGTTTGGCCTTGAAAATGTTCCAGTGATGAGTTATGGTTATTGGGAAGGGAATGCAATACAAAGTAGACAGTGTGGTCTCCCATCCTTGACCGATTCTTCTTTCTTGTTAGCTAAATATCCTGCTGCGTTTAGTAATTATCCTACATCATCTTCCAATTTGGAGCAACAGCCACCATTGCAGGCCTTTGCCAAGAATAGTGAACGGCATTTGACTGGTGCATCTACTTTTACAGCTAGAGACATGAATGGCAGCAATGCGATGCTTGATTATCAGATGTTTAGAGGTAGAGATGGTCCACAAGTTCAGCCATTTATGGTTGATGTCCAACACCGACAAGATGTATTCTCTGAGATGCAGAGAAGAAACAGTTTTGAAGCAATCTCCAGCTTGCAGCAGCAAGGAAGGGGAATGATGGGAATGAATAGCGTTGGAAGGCCTGGGATTCTAGTGGGAGGATCGTGCAGCGGTGTCTCGGATCCTGTGGCGGCAATTAAAATGCATTATTCCACCAATTCTGACAAGTATGGTGGTCAAAACGGAGGTGTTGTTAGAGATGATGAATCTTGGGGAGGGAAAGGGGACTTAGGCAGGTAG
Protein sequence

>MS.gene041777.t1

MPPEPLPWDRKDFFKERKHERSESVGSVARWRDSSHHRDFNRWGSAEFRSRPPGHGKQGGWHMFSEEPGHGYGVSRSGDKMLEEDGRPLVSRGDGKYGRSSRDNRGGPFGQRDWRGHSWEASNGSPNLARRPQDMNNEQRSVDDSPTYSSHPHSDFVNAWEQHNLKDQHAKTGGVNGLGTGPRCDRENSLSSIDWKPLKWTRSGSLSSRGSGLSHSSSSRSMAGTDSYEGKPNLKHKNVTAVESHSGEATACVTSSMPSEDATSRKKPRLNWGEGLAKYEKKKVDVPDPGSNKDGSVSSAGNMEPCSSISPNLVDKSPKVTGFSDCASPATPSSVACSSSPGVDDKLLGKAGNADNDVSNLTDSPAPGFQNLLQKFYLNLDKLDVDSLNSLGSSIVELVQSDDPCSDDSGLVRTSAINKLLIWKADISKVLEMTESEIDLLENELKSLKSESVDRSQCPVASGSQQADSSSKFYEQRVEVSQKVIRPVPLKIISSDEPNTVKMPQSTNLCSIHENDKEEDIDSPGSATSKFVEPLPLVNAVSSSDTRGYDNLSRDMNAVQSTMMKCFVRCNRKNTSVPACNDVNTPTEVKDRLGDVTFGANLCSSYGDTYKSIIASNKESANRAHKVFTKLVPKECKKHGNMGVSNDSSSHTLIVQKFAEKKRFERFKERVIALKFKALHHLWKEDMRLLSIRKCRPRSHKKNEPNVRTTCSSNMKNRSSIRSRFTFPAGNHLSLVPTTEIINFTSKLLSESQAQLQRNTLKMPALILDEKEKMVTKFISSNGLVEDPLAIEKERGTINPWTSEEKELFLKKFAAFGKDFRKIASFLDHKTTADCVEFYYKNHKSECFEKLKRKDVGKLGKSYAAKTNLMASGKKWNHEVNVSSLDILSAASVMADVIAGNKRIRGRFLLGYGNVKASRGEDSIIERSNSFDTLGDERETAAAADVLAGICGSFSSEAMSSCITSSIDPVDGNKETKFLKANPIFKQPLTPDISQNADDETCSDESCGEATEWTDDETAAFLQAVSSFGKDFAKISQCVGTKTQEHCKRFFSKTRKCLGLNLENPIPGINGSPLNDDANGGESDTDDACVVEAGSVVDADKSGNKTDEDLPSDALNTFHDESNPLEATSLSAKLNESREISGTEVCLENVDVASVVCAINVESKLGSDVSGVGLCTTDKSGSVNGVGLGGTVRESISASEIIKPRECGSVALDRTVSEGSSGGLCLGNEVERQRVSAPQCVVDKDVKHIADAGVVVELKSCVLESSTAANVSFSPVVNSCSGLSFGSENKHVSFGKPHTSALSMSDLQATANSLLLKTAAAQCEKTVSQDRLSSTCDIQGGRDMRCHSSGSNGEHQLPLSGSHVETVSVLQGYSMQVPIKKEVDGDVNCSSSAAEFPLRPQKVKQTDGHFKSLWHSSDSEKTSKNGDVKLFGKILTNPSSTQNPILTAKRSEENGSHHPKLNKSSNLNFTGHQNSDENLKFLKFGLENVPVMSYGYWEGNAIQSRQCGLPSLTDSSFLLAKYPAAFSNYPTSSSNLEQQPPLQAFAKNSERHLTGASTFTARDMNGSNAMLDYQMFRGRDGPQVQPFMVDVQHRQDVFSEMQRRNSFEAISSLQQQGRGMMGMNSVGRPGILVGGSCSGVSDPVAAIKMHYSTNSDKYGGQNGGVVRDDESWGGKGDLGR