Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041895.t1 | XP_024638779.1 | 98.4 | 445 | 5 | 1 | 1 | 443 | 25 | 469 | 1.70E-245 | 858.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041895.t1 | Q9SN22 | 56.8 | 440 | 145 | 10 | 12 | 444 | 9 | 410 | 1.9e-133 | 477.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041895.t1 | G7JCU8 | 98.4 | 445 | 5 | 1 | 1 | 443 | 25 | 469 | 1.2e-245 | 858.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene041895.t1 | TF | GRAS |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041895.t1 | MTR_4g095500 | 98.652 | 445 | 4 | 1 | 1 | 443 | 25 | 469 | 0.0 | 914 |
MS.gene041895.t1 | MTR_5g015950 | 68.282 | 454 | 126 | 8 | 1 | 443 | 1 | 447 | 0.0 | 615 |
MS.gene041895.t1 | MTR_3g053270 | 68.282 | 454 | 126 | 8 | 1 | 443 | 1 | 447 | 0.0 | 615 |
MS.gene041895.t1 | MTR_2g089100 | 43.488 | 430 | 199 | 5 | 28 | 443 | 45 | 444 | 1.17e-121 | 362 |
MS.gene041895.t1 | MTR_4g097080 | 29.356 | 419 | 243 | 10 | 33 | 443 | 131 | 504 | 7.18e-55 | 190 |
MS.gene041895.t1 | MTR_5g015490 | 29.469 | 414 | 251 | 8 | 35 | 443 | 114 | 491 | 3.11e-53 | 186 |
MS.gene041895.t1 | MTR_2g099110 | 29.508 | 427 | 237 | 12 | 34 | 443 | 73 | 452 | 1.24e-48 | 172 |
MS.gene041895.t1 | MTR_3g089055 | 27.358 | 424 | 264 | 7 | 19 | 441 | 184 | 564 | 8.37e-43 | 159 |
MS.gene041895.t1 | MTR_3g089055 | 27.358 | 424 | 264 | 7 | 19 | 441 | 189 | 569 | 9.18e-43 | 159 |
MS.gene041895.t1 | MTR_1g029420 | 27.073 | 410 | 257 | 7 | 33 | 441 | 223 | 591 | 7.32e-42 | 156 |
MS.gene041895.t1 | MTR_5g097480 | 27.163 | 416 | 251 | 9 | 32 | 441 | 174 | 543 | 6.57e-39 | 147 |
MS.gene041895.t1 | MTR_4g133660 | 27.381 | 420 | 248 | 10 | 32 | 442 | 172 | 543 | 1.77e-38 | 146 |
MS.gene041895.t1 | MTR_8g442410 | 27.361 | 413 | 249 | 12 | 36 | 441 | 156 | 524 | 2.69e-37 | 143 |
MS.gene041895.t1 | MTR_5g094450 | 25.728 | 412 | 266 | 8 | 32 | 441 | 158 | 531 | 2.67e-36 | 140 |
MS.gene041895.t1 | MTR_3g056110 | 24.703 | 421 | 270 | 9 | 23 | 441 | 166 | 541 | 9.30e-36 | 139 |
MS.gene041895.t1 | MTR_2g082090 | 25.240 | 416 | 259 | 7 | 32 | 441 | 209 | 578 | 5.62e-35 | 137 |
MS.gene041895.t1 | MTR_8g020840 | 28.046 | 435 | 241 | 13 | 28 | 441 | 164 | 547 | 2.25e-34 | 135 |
MS.gene041895.t1 | MTR_7g027190 | 26.316 | 418 | 252 | 9 | 35 | 441 | 300 | 672 | 1.18e-33 | 134 |
MS.gene041895.t1 | MTR_2g026250 | 25.728 | 412 | 263 | 9 | 32 | 441 | 225 | 595 | 3.60e-31 | 126 |
MS.gene041895.t1 | MTR_4g064150 | 23.831 | 449 | 290 | 11 | 3 | 444 | 332 | 735 | 9.79e-31 | 125 |
MS.gene041895.t1 | MTR_3g022830 | 24.318 | 440 | 269 | 10 | 36 | 441 | 26 | 435 | 1.12e-30 | 123 |
MS.gene041895.t1 | MTR_3g065980 | 25.296 | 423 | 243 | 10 | 36 | 441 | 173 | 539 | 1.23e-30 | 124 |
MS.gene041895.t1 | MTR_2g097410 | 23.741 | 417 | 273 | 10 | 32 | 444 | 368 | 743 | 2.69e-28 | 118 |
MS.gene041895.t1 | MTR_4g064180 | 24.163 | 418 | 267 | 13 | 32 | 442 | 251 | 625 | 5.07e-28 | 117 |
MS.gene041895.t1 | MTR_4g104020 | 26.168 | 428 | 240 | 14 | 34 | 441 | 148 | 519 | 1.51e-27 | 115 |
MS.gene041895.t1 | MTR_4g064160 | 24.762 | 420 | 263 | 12 | 32 | 444 | 313 | 686 | 2.68e-27 | 115 |
MS.gene041895.t1 | MTR_4g064200 | 26.024 | 415 | 254 | 12 | 35 | 443 | 284 | 651 | 2.78e-27 | 115 |
MS.gene041895.t1 | MTR_5g009080 | 23.881 | 469 | 286 | 11 | 15 | 441 | 38 | 477 | 3.33e-27 | 114 |
MS.gene041895.t1 | MTR_4g064120 | 23.981 | 417 | 269 | 12 | 32 | 442 | 251 | 625 | 4.03e-27 | 114 |
MS.gene041895.t1 | MTR_4g076140 | 24.124 | 485 | 286 | 13 | 5 | 441 | 18 | 468 | 4.06e-27 | 113 |
MS.gene041895.t1 | MTR_7g062120 | 23.923 | 418 | 269 | 9 | 32 | 444 | 369 | 742 | 9.05e-27 | 114 |
MS.gene041895.t1 | MTR_2g097310 | 23.684 | 418 | 268 | 10 | 32 | 444 | 269 | 640 | 7.57e-25 | 107 |
MS.gene041895.t1 | MTR_6g047750 | 26.190 | 420 | 252 | 10 | 31 | 441 | 291 | 661 | 1.47e-24 | 107 |
MS.gene041895.t1 | MTR_2g097467 | 22.760 | 413 | 271 | 8 | 35 | 444 | 289 | 656 | 2.79e-23 | 103 |
MS.gene041895.t1 | MTR_2g097390 | 23.326 | 433 | 279 | 11 | 17 | 443 | 257 | 642 | 5.98e-23 | 102 |
MS.gene041895.t1 | MTR_2g097350 | 22.512 | 422 | 268 | 10 | 32 | 444 | 271 | 642 | 7.09e-22 | 99.0 |
MS.gene041895.t1 | MTR_2g097473 | 21.981 | 414 | 273 | 8 | 35 | 444 | 289 | 656 | 1.07e-21 | 98.2 |
MS.gene041895.t1 | MTR_4g077760 | 25.882 | 425 | 244 | 16 | 30 | 441 | 188 | 554 | 2.29e-21 | 97.1 |
MS.gene041895.t1 | MTR_2g097463 | 22.947 | 414 | 269 | 9 | 35 | 444 | 290 | 657 | 2.68e-21 | 97.1 |
MS.gene041895.t1 | MTR_4g102790 | 22.249 | 418 | 272 | 12 | 35 | 444 | 292 | 664 | 3.13e-21 | 97.1 |
MS.gene041895.t1 | MTR_1g069725 | 24.700 | 417 | 241 | 16 | 35 | 441 | 109 | 462 | 9.71e-21 | 94.7 |
MS.gene041895.t1 | MTR_7g057230 | 24.451 | 319 | 199 | 5 | 128 | 441 | 375 | 656 | 8.78e-20 | 92.4 |
MS.gene041895.t1 | MTR_7g074650 | 23.544 | 412 | 250 | 14 | 38 | 443 | 441 | 793 | 3.83e-19 | 90.9 |
MS.gene041895.t1 | MTR_2g097380 | 22.660 | 406 | 236 | 10 | 42 | 443 | 231 | 562 | 2.24e-18 | 87.8 |
MS.gene041895.t1 | MTR_1g096030 | 23.918 | 439 | 242 | 17 | 35 | 441 | 80 | 458 | 1.30e-17 | 85.1 |
MS.gene041895.t1 | MTR_4g076020 | 22.439 | 410 | 248 | 14 | 38 | 443 | 87 | 430 | 2.30e-16 | 81.3 |
MS.gene041895.t1 | MTR_5g058860 | 24.941 | 421 | 261 | 16 | 34 | 441 | 118 | 496 | 5.34e-16 | 80.5 |
MS.gene041895.t1 | MTR_8g093070 | 22.912 | 419 | 253 | 14 | 35 | 443 | 139 | 497 | 1.14e-15 | 79.3 |
MS.gene041895.t1 | MTR_3g072710 | 23.515 | 421 | 269 | 14 | 34 | 441 | 119 | 499 | 1.22e-15 | 79.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041895.t1 | AT3G49950 | 56.818 | 440 | 145 | 10 | 12 | 444 | 9 | 410 | 6.89e-172 | 488 |
MS.gene041895.t1 | AT5G67411 | 56.388 | 227 | 72 | 4 | 159 | 383 | 1 | 202 | 2.56e-77 | 239 |
MS.gene041895.t1 | AT4G37650 | 29.621 | 422 | 251 | 8 | 33 | 443 | 144 | 530 | 2.65e-52 | 184 |
MS.gene041895.t1 | AT1G21450 | 25.791 | 411 | 262 | 7 | 33 | 441 | 223 | 592 | 3.54e-39 | 149 |
MS.gene041895.t1 | AT2G04890 | 26.034 | 411 | 255 | 8 | 32 | 441 | 50 | 412 | 2.53e-38 | 144 |
MS.gene041895.t1 | AT1G50600 | 25.000 | 424 | 271 | 8 | 20 | 441 | 147 | 525 | 6.44e-38 | 145 |
MS.gene041895.t1 | AT1G50600 | 25.000 | 424 | 271 | 8 | 20 | 441 | 222 | 600 | 1.20e-37 | 145 |
MS.gene041895.t1 | AT1G50600 | 25.000 | 424 | 271 | 8 | 20 | 441 | 218 | 596 | 1.28e-37 | 145 |
MS.gene041895.t1 | AT5G48150 | 26.988 | 415 | 246 | 10 | 36 | 441 | 123 | 489 | 2.62e-37 | 142 |
MS.gene041895.t1 | AT5G48150 | 26.988 | 415 | 246 | 10 | 36 | 441 | 123 | 489 | 2.62e-37 | 142 |
MS.gene041895.t1 | AT5G48150 | 26.988 | 415 | 246 | 10 | 36 | 441 | 123 | 489 | 2.62e-37 | 142 |
MS.gene041895.t1 | AT5G48150 | 26.988 | 415 | 246 | 10 | 36 | 441 | 123 | 489 | 2.62e-37 | 142 |
MS.gene041895.t1 | AT4G17230 | 26.988 | 415 | 257 | 8 | 32 | 443 | 155 | 526 | 5.32e-34 | 134 |
MS.gene041895.t1 | AT4G17230 | 26.988 | 415 | 257 | 8 | 32 | 443 | 155 | 526 | 5.32e-34 | 134 |
MS.gene041895.t1 | AT1G50420 | 25.835 | 449 | 264 | 11 | 35 | 441 | 57 | 478 | 7.62e-32 | 127 |
MS.gene041895.t1 | AT3G03450 | 25.362 | 414 | 248 | 9 | 36 | 441 | 184 | 544 | 9.94e-31 | 124 |
MS.gene041895.t1 | AT5G17490 | 24.390 | 410 | 255 | 7 | 34 | 441 | 159 | 515 | 1.69e-30 | 124 |
MS.gene041895.t1 | AT2G29065 | 26.555 | 418 | 260 | 11 | 35 | 444 | 252 | 630 | 3.58e-30 | 124 |
MS.gene041895.t1 | AT3G46600 | 25.298 | 419 | 259 | 9 | 32 | 443 | 1 | 372 | 4.03e-29 | 117 |
MS.gene041895.t1 | AT3G46600 | 25.238 | 420 | 260 | 9 | 32 | 444 | 209 | 581 | 1.77e-28 | 118 |
MS.gene041895.t1 | AT3G46600 | 25.298 | 419 | 259 | 9 | 32 | 443 | 177 | 548 | 2.35e-28 | 117 |
MS.gene041895.t1 | AT5G52510 | 23.278 | 421 | 268 | 7 | 31 | 441 | 264 | 639 | 3.83e-28 | 117 |
MS.gene041895.t1 | AT1G07530 | 23.776 | 429 | 281 | 10 | 19 | 443 | 380 | 766 | 2.06e-26 | 112 |
MS.gene041895.t1 | AT2G29060 | 24.709 | 429 | 263 | 12 | 28 | 444 | 314 | 694 | 2.48e-26 | 112 |
MS.gene041895.t1 | AT2G29060 | 24.709 | 429 | 263 | 12 | 28 | 444 | 277 | 657 | 2.56e-26 | 112 |
MS.gene041895.t1 | AT2G01570 | 24.146 | 410 | 253 | 12 | 36 | 441 | 225 | 580 | 6.09e-26 | 110 |
MS.gene041895.t1 | AT3G13840 | 26.730 | 419 | 242 | 15 | 33 | 441 | 146 | 509 | 1.10e-25 | 109 |
MS.gene041895.t1 | AT5G59450 | 23.714 | 447 | 289 | 10 | 6 | 444 | 198 | 600 | 1.48e-25 | 110 |
MS.gene041895.t1 | AT2G37650 | 23.558 | 416 | 269 | 11 | 32 | 443 | 332 | 702 | 3.21e-24 | 106 |
MS.gene041895.t1 | AT2G37650 | 23.558 | 416 | 269 | 11 | 32 | 443 | 344 | 714 | 3.29e-24 | 106 |
MS.gene041895.t1 | AT1G14920 | 23.659 | 410 | 255 | 11 | 36 | 441 | 173 | 528 | 4.92e-24 | 105 |
MS.gene041895.t1 | AT5G41920 | 25.542 | 415 | 243 | 15 | 35 | 441 | 43 | 399 | 4.89e-21 | 95.1 |
MS.gene041895.t1 | AT3G54220 | 24.455 | 413 | 248 | 15 | 38 | 443 | 296 | 651 | 2.49e-20 | 94.4 |
MS.gene041895.t1 | AT1G55580 | 22.273 | 440 | 276 | 11 | 32 | 441 | 41 | 444 | 1.08e-19 | 91.7 |
MS.gene041895.t1 | AT1G63100 | 22.642 | 424 | 264 | 13 | 35 | 441 | 277 | 653 | 6.00e-19 | 90.1 |
MS.gene041895.t1 | AT1G63100 | 22.642 | 424 | 264 | 13 | 35 | 441 | 252 | 628 | 7.80e-19 | 89.7 |
MS.gene041895.t1 | AT5G66770 | 24.084 | 382 | 234 | 12 | 34 | 410 | 219 | 549 | 9.66e-19 | 89.4 |
MS.gene041895.t1 | AT4G08250 | 24.645 | 422 | 253 | 20 | 34 | 441 | 106 | 476 | 1.78e-13 | 72.8 |
MS.gene041895.t1 | AT3G50650 | 23.393 | 389 | 236 | 12 | 64 | 441 | 204 | 541 | 2.96e-11 | 65.9 |
Find 0 sgRNAs with CRISPR-Local
Find 82 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATGAGTTTGAATTTGATA+GGG | - | 32647:29861-29880 | MS.gene041895:intergenic | 20.0% |
! | CATATGAGTTTGAATTTGAT+AGG | - | 32647:29862-29881 | MS.gene041895:intergenic | 25.0% |
! | GATCTTTCTTATGAAGAATT+AGG | + | 32647:29653-29672 | MS.gene041895:CDS | 25.0% |
! | TCATAAGAAAGATCAAGTTT+AGG | - | 32647:29647-29666 | MS.gene041895:intergenic | 25.0% |
! | TCTACTAAAATAACAAGTGT+TGG | - | 32647:29977-29996 | MS.gene041895:intergenic | 25.0% |
!! | ATGAGAAATGCTAATTTTCA+AGG | + | 32647:30220-30239 | MS.gene041895:CDS | 25.0% |
!! | TGAGAAATGCTAATTTTCAA+GGG | + | 32647:30221-30240 | MS.gene041895:CDS | 25.0% |
!! | TGATTTAACTTCAAACAACT+TGG | + | 32647:30006-30025 | MS.gene041895:CDS | 25.0% |
ACAACTTGGTTAGTAGATTA+AGG | + | 32647:30020-30039 | MS.gene041895:CDS | 30.0% | |
ATGAACATATTGTGCTTACT+TGG | + | 32647:30326-30345 | MS.gene041895:CDS | 30.0% | |
GGTCTGCATTTAATTATCTA+TGG | + | 32647:30041-30060 | MS.gene041895:CDS | 30.0% | |
TAAGAAAGATCAAGTTTAGG+TGG | - | 32647:29644-29663 | MS.gene041895:intergenic | 30.0% | |
! | GTTTCTTCAAGTTACACAAA+TGG | + | 32647:29731-29750 | MS.gene041895:CDS | 30.0% |
! | TTGTTCTACTAGCATTTTAC+AGG | - | 32647:29327-29346 | MS.gene041895:intergenic | 30.0% |
!! | AATGCTAATTTTCAAGGGAT+TGG | + | 32647:30226-30245 | MS.gene041895:CDS | 30.0% |
!! | AATTTTCAAGGGATTGGATT+TGG | + | 32647:30232-30251 | MS.gene041895:CDS | 30.0% |
!! | TAGTTAAAGCTTTGGATGTT+GGG | - | 32647:29112-29131 | MS.gene041895:intergenic | 30.0% |
!! | TGAAGAATTAGGTTCTAAGT+TGG | + | 32647:29664-29683 | MS.gene041895:CDS | 30.0% |
AATGTGTCCACAGTATCATA+AGG | - | 32647:30070-30089 | MS.gene041895:intergenic | 35.0% | |
ACATTTGAGAGTTCAACGTT+TGG | + | 32647:29772-29791 | MS.gene041895:CDS | 35.0% | |
ACCAAAGGTAGTTAAAGCTT+TGG | - | 32647:29120-29139 | MS.gene041895:intergenic | 35.0% | |
AGTTGAACCTATAGGCAAAT+GGG | + | 32647:30189-30208 | MS.gene041895:CDS | 35.0% | |
ATGGATACCTTATGATACTG+TGG | + | 32647:30060-30079 | MS.gene041895:CDS | 35.0% | |
CATATTGTGCTTACTTGGAA+AGG | + | 32647:30331-30350 | MS.gene041895:CDS | 35.0% | |
GAAACAGTGAGTTTGATCAA+AGG | - | 32647:29587-29606 | MS.gene041895:intergenic | 35.0% | |
GAATTTGATAGGGTTTCATC+TGG | - | 32647:29851-29870 | MS.gene041895:intergenic | 35.0% | |
GGTATGAAGCAGATATTTGT+TGG | + | 32647:30119-30138 | MS.gene041895:CDS | 35.0% | |
TGAGAATCTGTGTGTATCTA+TGG | - | 32647:29378-29397 | MS.gene041895:intergenic | 35.0% | |
! | GTTCAACGTTTGGTTTATTC+AGG | + | 32647:29782-29801 | MS.gene041895:CDS | 35.0% |
! | TACTAGCATTTTACAGGTAC+CGG | - | 32647:29321-29340 | MS.gene041895:intergenic | 35.0% |
! | TCCAAAGCTTTAACTACCTT+TGG | + | 32647:29116-29135 | MS.gene041895:CDS | 35.0% |
!! | GTAGTTAAAGCTTTGGATGT+TGG | - | 32647:29113-29132 | MS.gene041895:intergenic | 35.0% |
!!! | ATGTTGTTTTTGCTTCTGCT+TGG | + | 32647:30359-30378 | MS.gene041895:CDS | 35.0% |
AACAACATAGCACCACAAGA+TGG | + | 32647:29233-29252 | MS.gene041895:CDS | 40.0% | |
ACTTCGTGGATTTAACACCT+TGG | + | 32647:29414-29433 | MS.gene041895:CDS | 40.0% | |
ACTTGCTCAACAAATCCTGT+GGG | + | 32647:29205-29224 | MS.gene041895:CDS | 40.0% | |
AGTAGTAACAGTAGTAGCAG+TGG | - | 32647:29909-29928 | MS.gene041895:intergenic | 40.0% | |
CTGTTACTACTACGTCTCTT+AGG | + | 32647:29918-29937 | MS.gene041895:CDS | 40.0% | |
CTTTGTTCCCATTTGCCTAT+AGG | - | 32647:30199-30218 | MS.gene041895:intergenic | 40.0% | |
GAGAATGTGATAGCTCATGA+AGG | + | 32647:30148-30167 | MS.gene041895:CDS | 40.0% | |
GAGTTGAACCTATAGGCAAA+TGG | + | 32647:30188-30207 | MS.gene041895:CDS | 40.0% | |
GGTTTATTCAGGTGAAGCTT+TGG | + | 32647:29793-29812 | MS.gene041895:CDS | 40.0% | |
GTGGAAGTAAACAAAGGCAA+TGG | + | 32647:30098-30117 | MS.gene041895:CDS | 40.0% | |
GTTGAGAGAGTTGAACCTAT+AGG | + | 32647:30181-30200 | MS.gene041895:CDS | 40.0% | |
TAGGTCAAGAAACGTGACAT+TGG | + | 32647:29697-29716 | MS.gene041895:CDS | 40.0% | |
TGATTTGAGTCACCATCTTG+TGG | - | 32647:29248-29267 | MS.gene041895:intergenic | 40.0% | |
TTAACACCTTGGCATCGTTT+CGG | + | 32647:29425-29444 | MS.gene041895:CDS | 40.0% | |
TTGAGCAAGTGTTACATCGT+TGG | - | 32647:29195-29214 | MS.gene041895:intergenic | 40.0% | |
!! | CTAAGTTGGTGAATTTCGCT+AGG | + | 32647:29678-29697 | MS.gene041895:CDS | 40.0% |
!! | GCGATAGCATCGATTAATGT+AGG | - | 32647:29545-29564 | MS.gene041895:intergenic | 40.0% |
ACAAATCGTGCAGCGAAAAC+CGG | + | 32647:29299-29318 | MS.gene041895:CDS | 45.0% | |
AGCTGCTAATGCAGCAATTC+TGG | + | 32647:29454-29473 | MS.gene041895:CDS | 45.0% | |
AGTAGTAGCAGTGGTAGTAG+AGG | - | 32647:29900-29919 | MS.gene041895:intergenic | 45.0% | |
ATGCTTGATGAACATGCTGC+TGG | + | 32647:30283-30302 | MS.gene041895:CDS | 45.0% | |
CACTTGCTCAACAAATCCTG+TGG | + | 32647:29204-29223 | MS.gene041895:CDS | 45.0% | |
CAGATAAGCCTACCAAACCA+TGG | + | 32647:29084-29103 | MS.gene041895:CDS | 45.0% | |
CATGCAGTTTGTGTCACCAA+AGG | - | 32647:29135-29154 | MS.gene041895:intergenic | 45.0% | |
CTATGTTGTTGAGAACCCAC+AGG | - | 32647:29223-29242 | MS.gene041895:intergenic | 45.0% | |
TAACACCTTGGCATCGTTTC+GGG | + | 32647:29426-29445 | MS.gene041895:CDS | 45.0% | |
TGATCAAAGGAGCAACTTCG+TGG | - | 32647:29574-29593 | MS.gene041895:intergenic | 45.0% | |
TGATGAACATGCTGCTGGAT+GGG | + | 32647:30288-30307 | MS.gene041895:CDS | 45.0% | |
TGCCACGTGGAAGTAAACAA+AGG | + | 32647:30092-30111 | MS.gene041895:CDS | 45.0% | |
TTGATGAACATGCTGCTGGA+TGG | + | 32647:30287-30306 | MS.gene041895:CDS | 45.0% | |
TTTCGCTGCACGATTTGTGA+GGG | - | 32647:29297-29316 | MS.gene041895:intergenic | 45.0% | |
! | CTTTGGTGACACAAACTGCA+TGG | + | 32647:29133-29152 | MS.gene041895:CDS | 45.0% |
! | GCAATTCTGGAAGCAACAGA+AGG | + | 32647:29467-29486 | MS.gene041895:CDS | 45.0% |
! | TGCCTTTGTTTACTTCCACG+TGG | - | 32647:30097-30116 | MS.gene041895:intergenic | 45.0% |
! | TTGTTTCTTAACGCGCTTCG+AGG | + | 32647:29944-29963 | MS.gene041895:CDS | 45.0% |
! | TTTTCGCTGCACGATTTGTG+AGG | - | 32647:29298-29317 | MS.gene041895:intergenic | 45.0% |
!! | CATGGTTTGGTAGGCTTATC+TGG | - | 32647:29086-29105 | MS.gene041895:intergenic | 45.0% |
!! | GGATTTGGTGAGGAATGTGT+TGG | + | 32647:30247-30266 | MS.gene041895:CDS | 45.0% |
!! | TCAAGGGATTGGATTTGGTG+AGG | + | 32647:30237-30256 | MS.gene041895:CDS | 45.0% |
CACGATTTGTGAGGGCTCTA+AGG | - | 32647:29289-29308 | MS.gene041895:intergenic | 50.0% | |
CATCGAGCTAGCTAACTTCG+TGG | + | 32647:29400-29419 | MS.gene041895:CDS | 50.0% | |
GATGAACATGCTGCTGGATG+GGG | + | 32647:30289-30308 | MS.gene041895:CDS | 50.0% | |
GGATGTTGGGAACCATGGTT+TGG | - | 32647:29099-29118 | MS.gene041895:intergenic | 50.0% | |
! | GCTTTGGATGTTGGGAACCA+TGG | - | 32647:29104-29123 | MS.gene041895:intergenic | 50.0% |
! | GGTTTGGTAGGCTTATCTGG+TGG | - | 32647:29083-29102 | MS.gene041895:intergenic | 50.0% |
! | TGGTGAGGAATGTGTTGGTG+AGG | + | 32647:30252-30271 | MS.gene041895:CDS | 50.0% |
!! | GTTGGGAACCATGGTTTGGT+AGG | - | 32647:29095-29114 | MS.gene041895:intergenic | 50.0% |
GTGGACACATTTCTGCCACG+TGG | + | 32647:30079-30098 | MS.gene041895:CDS | 55.0% | |
GCGTACCCGAAACGATGCCA+AGG | - | 32647:29434-29453 | MS.gene041895:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
32647 | gene | 29059 | 30393 | 29059 | ID=MS.gene041895 |
32647 | mRNA | 29059 | 30393 | 29059 | ID=MS.gene041895.t1;Parent=MS.gene041895 |
32647 | exon | 29059 | 30393 | 29059 | ID=MS.gene041895.t1.exon1;Parent=MS.gene041895.t1 |
32647 | CDS | 29059 | 30393 | 29059 | ID=cds.MS.gene041895.t1;Parent=MS.gene041895.t1 |
Gene Sequence |
Protein sequence |