AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene041934

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041934.t1 MTR_4g094982 94.624 279 6 3 1 278 1 271 0.0 522
MS.gene041934.t1 MTR_5g016510 53.191 329 88 9 1 277 1 315 9.95e-105 307
MS.gene041934.t1 MTR_6g015455 79.091 110 23 0 1 110 1 110 3.65e-57 197
MS.gene041934.t1 MTR_3g101290 78.095 105 23 0 1 105 33 137 1.44e-56 181
MS.gene041934.t1 MTR_5g082910 74.257 101 26 0 2 102 16 116 1.08e-49 166
MS.gene041934.t1 MTR_4g019370 70.874 103 30 0 3 105 36 138 2.86e-49 166
MS.gene041934.t1 MTR_3g110028 53.211 109 51 0 4 112 84 192 4.07e-38 142
MS.gene041934.t1 MTR_1g026870 53.211 109 51 0 4 112 84 192 7.63e-38 142
MS.gene041934.t1 MTR_4g082040 58.416 101 42 0 5 105 105 205 1.31e-37 137
MS.gene041934.t1 MTR_5g041570 57.426 101 43 0 5 105 134 234 2.08e-37 137
MS.gene041934.t1 MTR_7g061330 52.294 109 52 0 4 112 76 184 1.20e-36 136
MS.gene041934.t1 MTR_6g027370 51.786 112 54 0 4 115 98 209 1.23e-36 133
MS.gene041934.t1 MTR_7g061330 52.294 109 52 0 4 112 112 220 1.30e-36 137
MS.gene041934.t1 MTR_7g461410 52.294 109 52 0 4 112 112 220 1.30e-36 137
MS.gene041934.t1 MTR_7g086960 55.446 101 45 0 5 105 89 189 6.62e-35 129
MS.gene041934.t1 MTR_3g077650 53.271 107 50 0 1 107 177 283 3.21e-34 129
MS.gene041934.t1 MTR_4g105660 52.885 104 49 0 4 107 179 282 3.39e-34 128
MS.gene041934.t1 MTR_6g074860 53.000 100 47 0 5 104 4 103 1.19e-33 123
MS.gene041934.t1 MTR_5g042030 56.863 102 43 1 5 105 9 110 1.62e-33 124
MS.gene041934.t1 MTR_3g089045 55.446 101 45 0 5 105 16 116 1.75e-33 124
MS.gene041934.t1 MTR_5g049190 41.958 143 70 2 4 133 18 160 2.71e-33 122
MS.gene041934.t1 MTR_7g037260 51.429 105 51 0 1 105 141 245 3.37e-33 124
MS.gene041934.t1 MTR_5g070020 50.962 104 51 0 4 107 121 224 8.05e-33 123
MS.gene041934.t1 MTR_7g037130 50.943 106 50 1 1 106 141 244 1.01e-32 123
MS.gene041934.t1 MTR_7g451170 50.962 104 51 0 2 105 188 291 3.63e-32 122
MS.gene041934.t1 MTR_4g029540 56.863 102 42 2 5 104 12 113 5.03e-32 120
MS.gene041934.t1 MTR_3g463400 50.962 104 51 0 4 107 132 235 1.11e-31 122
MS.gene041934.t1 MTR_3g461490 28.475 295 174 8 5 267 14 303 7.65e-31 117
MS.gene041934.t1 MTR_3g052450 53.922 102 46 1 5 105 42 143 1.04e-30 120
MS.gene041934.t1 MTR_4g088015 50.495 101 50 0 4 104 220 320 1.12e-30 119
MS.gene041934.t1 MTR_8g006470 54.902 102 44 2 5 104 12 113 1.66e-30 115
MS.gene041934.t1 MTR_5g010650 50.000 98 49 0 2 99 107 204 1.18e-29 117
MS.gene041934.t1 MTR_0008s0390 42.143 140 78 2 5 143 15 152 1.21e-29 113
MS.gene041934.t1 MTR_5g029840 50.000 102 50 1 5 105 14 115 1.28e-29 114
MS.gene041934.t1 MTR_5g007370 52.830 106 41 2 5 105 14 115 1.30e-29 114
MS.gene041934.t1 MTR_3g052430 51.961 102 48 1 5 105 43 144 1.46e-29 117
MS.gene041934.t1 MTR_0008s0470 50.000 102 50 1 5 105 15 116 7.46e-29 111
MS.gene041934.t1 MTR_6g012690 41.844 141 72 3 5 140 14 149 1.13e-28 112
MS.gene041934.t1 MTR_2g099740 45.312 128 63 2 5 131 14 135 1.18e-28 113
MS.gene041934.t1 MTR_7g110830 53.922 102 46 1 5 105 14 115 1.21e-28 112
MS.gene041934.t1 MTR_3g028740 54.902 102 45 1 5 105 24 125 1.42e-28 112
MS.gene041934.t1 MTR_1g062940 50.962 104 50 1 5 107 8 111 1.48e-28 108
MS.gene041934.t1 MTR_1g085640 52.941 102 47 1 5 105 14 115 2.08e-28 112
MS.gene041934.t1 MTR_1g085040 52.941 102 47 1 5 105 14 115 2.65e-28 111
MS.gene041934.t1 MTR_7g117730 50.980 102 49 1 5 105 14 115 3.24e-28 108
MS.gene041934.t1 MTR_0251s0050 49.020 102 51 1 5 105 15 116 3.39e-28 109
MS.gene041934.t1 MTR_3g074520 49.057 106 45 2 5 105 14 115 3.43e-28 110
MS.gene041934.t1 MTR_1g100653 47.222 108 56 1 5 111 14 121 3.60e-28 109
MS.gene041934.t1 MTR_7g087130 46.957 115 52 2 5 114 14 124 3.63e-28 110
MS.gene041934.t1 MTR_8g017500 44.776 134 66 3 5 137 14 140 4.00e-28 110
MS.gene041934.t1 MTR_1g017140 46.721 122 60 3 5 124 14 132 4.53e-28 110
MS.gene041934.t1 MTR_2g097910 45.736 129 57 2 5 120 22 150 4.93e-28 110
MS.gene041934.t1 MTR_3g103570 50.485 103 49 2 5 105 14 116 5.30e-28 110
MS.gene041934.t1 MTR_8g095390 49.593 123 52 3 5 123 14 130 5.71e-28 109
MS.gene041934.t1 MTR_4g121460 44.853 136 65 2 5 130 14 149 6.35e-28 110
MS.gene041934.t1 MTR_2g089450 49.505 101 50 1 5 104 14 114 6.42e-28 108
MS.gene041934.t1 MTR_4g057635 51.456 103 48 2 5 105 14 116 6.61e-28 109
MS.gene041934.t1 MTR_7g102110 47.664 107 54 2 5 109 14 120 6.74e-28 108
MS.gene041934.t1 MTR_7g035350 48.515 101 52 0 1 101 221 321 7.08e-28 111
MS.gene041934.t1 MTR_4g105130 52.941 102 47 1 5 105 14 115 1.01e-27 110
MS.gene041934.t1 MTR_2g034790 35.233 193 115 5 5 189 14 204 1.06e-27 109
MS.gene041934.t1 MTR_7g115650 48.182 110 48 2 1 105 10 115 1.13e-27 106
MS.gene041934.t1 MTR_1g112760 50.980 102 49 1 5 105 15 116 1.18e-27 107
MS.gene041934.t1 MTR_8g017440 50.476 105 51 1 5 108 14 118 1.27e-27 109
MS.gene041934.t1 MTR_1g045610 46.667 105 55 1 5 108 23 127 1.34e-27 107
MS.gene041934.t1 MTR_4g478180 50.000 106 44 2 5 105 15 116 1.45e-27 109
MS.gene041934.t1 MTR_1g043080 48.113 106 46 2 5 105 14 115 1.52e-27 107
MS.gene041934.t1 MTR_4g063100 44.660 103 54 2 5 105 9 110 1.60e-27 107
MS.gene041934.t1 MTR_7g450950 46.667 105 53 1 4 105 156 260 1.80e-27 108
MS.gene041934.t1 MTR_4g065017 52.941 102 47 1 5 105 19 120 1.81e-27 108
MS.gene041934.t1 MTR_3g077110 51.961 102 48 1 5 105 14 115 1.91e-27 108
MS.gene041934.t1 MTR_5g014990 50.485 103 49 2 5 105 14 116 2.25e-27 108
MS.gene041934.t1 MTR_1g043050 49.057 106 45 2 5 105 14 115 2.30e-27 106
MS.gene041934.t1 MTR_1g073170 49.020 102 51 1 5 105 22 123 2.33e-27 107
MS.gene041934.t1 MTR_0063s0090 48.077 104 45 2 5 103 14 113 2.59e-27 105
MS.gene041934.t1 MTR_1g017000 48.544 103 51 2 5 105 14 116 2.69e-27 106
MS.gene041934.t1 MTR_8g017540 49.550 111 53 2 5 112 60 170 3.29e-27 108
MS.gene041934.t1 MTR_2g064160 49.020 102 51 1 5 105 13 114 3.80e-27 107
MS.gene041934.t1 MTR_1g076150 38.728 173 95 4 5 170 14 182 4.01e-27 106
MS.gene041934.t1 MTR_2g089420 48.624 109 55 1 5 112 13 121 4.39e-27 109
MS.gene041934.t1 MTR_4g091490 47.059 102 53 1 5 105 15 116 5.25e-27 108
MS.gene041934.t1 MTR_1g057980 51.042 96 47 0 5 100 80 175 5.70e-27 106
MS.gene041934.t1 MTR_8g027345 50.980 102 49 1 5 105 14 115 6.02e-27 106
MS.gene041934.t1 MTR_4g485530 44.340 106 58 1 1 105 10 115 6.73e-27 103
MS.gene041934.t1 MTR_2g095520 53.061 98 44 2 5 100 14 111 7.85e-27 107
MS.gene041934.t1 MTR_6g027340 32.571 175 107 3 5 179 16 179 1.13e-26 103
MS.gene041934.t1 MTR_7g010210 43.609 133 65 3 5 131 14 142 1.31e-26 105
MS.gene041934.t1 MTR_7g010210 43.609 133 65 3 5 131 14 142 1.44e-26 106
MS.gene041934.t1 MTR_6g009430 45.098 102 55 1 5 105 14 115 1.44e-26 106
MS.gene041934.t1 MTR_2g089620 49.020 102 51 1 5 105 14 115 1.72e-26 105
MS.gene041934.t1 MTR_7g076740 45.455 121 55 4 5 119 14 129 1.74e-26 105
MS.gene041934.t1 MTR_7g096930 48.113 106 46 2 5 105 14 115 1.82e-26 105
MS.gene041934.t1 MTR_2g011660 48.039 102 52 1 5 105 15 116 2.07e-26 106
MS.gene041934.t1 MTR_7g011170 47.115 104 54 1 5 107 14 117 2.24e-26 105
MS.gene041934.t1 MTR_8g098860 50.000 102 50 1 5 105 14 115 2.26e-26 105
MS.gene041934.t1 MTR_0140s0030 45.217 115 54 2 5 114 15 125 2.83e-26 105
MS.gene041934.t1 MTR_0489s0020 45.217 115 54 2 5 114 15 125 2.83e-26 105
MS.gene041934.t1 MTR_4g082230 40.714 140 75 3 5 143 14 146 2.87e-26 106
MS.gene041934.t1 MTR_4g097570 51.020 98 45 2 5 99 14 111 3.16e-26 104
MS.gene041934.t1 MTR_5g079670 47.059 102 53 1 5 105 13 114 3.26e-26 102
MS.gene041934.t1 MTR_8g017340 52.427 103 47 2 5 105 14 116 4.13e-26 107
MS.gene041934.t1 MTR_8g031360 50.485 103 49 2 5 105 15 117 4.14e-26 104
MS.gene041934.t1 MTR_1g100667 47.115 104 54 1 5 107 15 118 6.38e-26 103
MS.gene041934.t1 MTR_3g097450 49.524 105 52 1 5 108 14 118 7.07e-26 103
MS.gene041934.t1 MTR_2g096380 42.308 104 57 2 5 106 8 110 7.74e-26 102
MS.gene041934.t1 MTR_6g055910 48.039 102 52 1 5 105 16 117 1.01e-25 103
MS.gene041934.t1 MTR_6g027360 39.815 108 65 0 5 112 78 185 1.01e-25 103
MS.gene041934.t1 MTR_8g042410 47.059 102 53 1 5 105 39 140 1.04e-25 106
MS.gene041934.t1 MTR_4g082290 40.000 140 76 3 5 143 14 146 1.19e-25 105
MS.gene041934.t1 MTR_1g021230 49.020 102 51 1 5 105 59 160 1.30e-25 105
MS.gene041934.t1 MTR_4g100720 45.192 104 56 1 5 107 15 118 1.35e-25 100
MS.gene041934.t1 MTR_5g010020 51.546 97 46 1 5 100 14 110 1.47e-25 103
MS.gene041934.t1 MTR_5g078140 33.182 220 124 6 5 207 14 227 1.54e-25 103
MS.gene041934.t1 MTR_3g039990 42.735 117 58 2 5 116 15 127 1.81e-25 103
MS.gene041934.t1 MTR_4g097570 50.515 97 46 2 5 99 14 110 2.36e-25 102
MS.gene041934.t1 MTR_4g073420 49.020 102 51 1 5 105 14 115 2.65e-25 102
MS.gene041934.t1 MTR_6g090405 49.515 103 50 2 5 105 14 116 3.04e-25 101
MS.gene041934.t1 MTR_3g065440 47.170 106 47 2 5 105 14 115 3.14e-25 102
MS.gene041934.t1 MTR_5g078930 34.463 177 109 3 5 177 11 184 3.19e-25 100
MS.gene041934.t1 MTR_3g083540 47.059 102 53 1 5 105 43 144 3.48e-25 102
MS.gene041934.t1 MTR_8g017390 48.598 107 53 2 5 109 14 120 3.69e-25 104
MS.gene041934.t1 MTR_2g088170 51.961 102 48 1 5 105 31 132 4.15e-25 103
MS.gene041934.t1 MTR_0008s0280 46.226 106 54 2 5 107 14 119 4.44e-25 100
MS.gene041934.t1 MTR_8g017350 51.456 103 48 2 5 105 14 116 4.64e-25 104
MS.gene041934.t1 MTR_0001s0360 44.762 105 57 1 5 108 9 113 5.84e-25 100
MS.gene041934.t1 MTR_7g111290 53.125 96 44 1 5 99 14 109 6.72e-25 102
MS.gene041934.t1 MTR_2g067420 49.485 97 48 1 5 100 16 112 9.81e-25 101
MS.gene041934.t1 MTR_7g017260 45.794 107 55 2 5 108 27 133 9.92e-25 100
MS.gene041934.t1 MTR_4g128670 50.000 98 47 2 5 100 14 111 1.09e-24 101
MS.gene041934.t1 MTR_7g035075 47.525 101 52 1 5 104 16 116 1.61e-24 98.2
MS.gene041934.t1 MTR_1g110460 40.777 103 60 1 5 106 28 130 1.68e-24 100
MS.gene041934.t1 MTR_8g020490 47.059 102 53 1 5 105 10 111 1.70e-24 99.4
MS.gene041934.t1 MTR_3g011610 44.118 102 56 1 5 105 39 140 1.76e-24 102
MS.gene041934.t1 MTR_6g012180 46.535 101 45 2 5 100 14 110 2.63e-24 100
MS.gene041934.t1 MTR_5g088610 46.364 110 55 3 1 106 7 116 3.36e-24 100
MS.gene041934.t1 MTR_5g078910 43.810 105 58 1 5 108 9 113 4.75e-24 99.0
MS.gene041934.t1 MTR_5g079220 43.810 105 58 1 5 108 23 127 5.53e-24 98.2
MS.gene041934.t1 MTR_4g102380 45.283 106 49 2 5 105 14 115 5.88e-24 98.2
MS.gene041934.t1 MTR_5g078800 44.118 102 56 1 5 105 9 110 6.61e-24 97.8
MS.gene041934.t1 MTR_5g079290 41.905 105 60 1 5 108 19 123 7.81e-24 97.8
MS.gene041934.t1 MTR_5g088080 48.113 106 52 3 2 105 11 115 2.39e-23 96.3
MS.gene041934.t1 MTR_5g088150 48.113 106 52 3 2 105 11 115 2.39e-23 96.3
MS.gene041934.t1 MTR_5g488210 48.113 106 52 3 2 105 11 115 2.39e-23 96.3
MS.gene041934.t1 MTR_4g125520 38.281 128 78 1 5 131 14 141 2.48e-23 97.1
MS.gene041934.t1 MTR_6g006030 39.167 120 72 1 5 123 16 135 2.50e-23 95.1
MS.gene041934.t1 MTR_5g488170 48.113 106 52 3 2 105 11 115 3.33e-23 95.5
MS.gene041934.t1 MTR_5g088640 48.113 106 52 3 2 105 11 115 3.41e-23 96.3
MS.gene041934.t1 MTR_7g109320 51.304 115 55 1 5 118 14 128 5.23e-23 97.1
MS.gene041934.t1 MTR_5g078860 43.137 102 57 1 5 105 9 110 6.36e-23 95.9
MS.gene041934.t1 MTR_5g079120 42.857 105 59 1 5 108 63 167 8.54e-23 95.5
MS.gene041934.t1 MTR_5g062790 47.664 107 53 3 1 105 7 112 9.07e-23 95.5
MS.gene041934.t1 MTR_0247s0040 44.000 100 55 1 5 103 9 108 1.07e-22 92.4
MS.gene041934.t1 MTR_8g060940 44.444 99 54 1 5 102 9 107 1.26e-22 94.0
MS.gene041934.t1 MTR_0193s0090 42.574 101 57 1 5 104 9 109 1.62e-22 92.8
MS.gene041934.t1 MTR_5g078950 41.000 100 58 1 5 103 9 108 4.79e-22 92.8
MS.gene041934.t1 MTR_0197s0010 40.367 109 64 1 8 115 6 114 7.43e-22 91.7
MS.gene041934.t1 MTR_1g086530 42.157 102 58 1 5 105 35 136 1.78e-21 91.7
MS.gene041934.t1 MTR_1g086510 41.509 106 61 1 5 109 23 128 3.51e-21 90.5
MS.gene041934.t1 MTR_1g083630 44.792 96 52 1 5 99 14 109 6.99e-20 89.7
MS.gene041934.t1 MTR_3g045430 40.594 101 59 1 8 107 18 118 7.63e-20 87.4
MS.gene041934.t1 MTR_4g063100 48.529 68 35 0 38 105 14 81 2.32e-19 84.7
MS.gene041934.t1 MTR_2g033170 40.566 106 62 1 1 105 22 127 3.02e-19 86.3
MS.gene041934.t1 MTR_5g038910 36.735 98 62 0 8 105 29 126 4.21e-19 86.7
MS.gene041934.t1 MTR_5g038910 36.735 98 62 0 8 105 29 126 4.49e-19 87.0
MS.gene041934.t1 MTR_8g468380 33.333 108 72 0 8 115 25 132 1.14e-18 85.5
MS.gene041934.t1 MTR_6g055910 52.941 68 32 0 38 105 21 88 2.16e-18 82.8
MS.gene041934.t1 MTR_5g007300 50.667 75 36 1 5 78 66 140 6.91e-18 78.6
MS.gene041934.t1 MTR_2g096380 44.928 69 38 0 38 106 23 91 6.92e-18 80.5
MS.gene041934.t1 MTR_4g128190 44.954 109 44 4 5 109 13 109 1.35e-17 80.1
MS.gene041934.t1 MTR_4g123040 40.952 105 61 1 1 104 22 126 2.05e-17 80.9
MS.gene041934.t1 MTR_7g111290 59.677 62 25 0 38 99 6 67 3.02e-17 80.9
MS.gene041934.t1 MTR_7g061550 34.783 115 72 1 8 119 10 124 1.17e-15 76.3
MS.gene041934.t1 MTR_1g008970 29.932 147 75 3 2 143 107 230 2.49e-15 74.3
MS.gene041934.t1 MTR_1g085880 43.000 100 54 3 8 105 17 115 7.03e-13 66.2
MS.gene041934.t1 MTR_1g085770 43.000 100 54 3 8 105 17 115 1.26e-12 67.0
MS.gene041934.t1 MTR_0023s0210 40.000 75 44 1 5 78 9 83 1.82e-12 62.4
MS.gene041934.t1 MTR_6g080360 35.106 94 60 1 5 98 530 622 5.42e-11 63.2
MS.gene041934.t1 MTR_6g080360 35.106 94 60 1 5 98 310 402 8.89e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041934.t1 AT4G37260 54.448 281 80 10 1 249 9 273 1.64e-84 256
MS.gene041934.t1 AT5G67300 54.286 280 91 7 2 251 3 275 6.23e-84 254
MS.gene041934.t1 AT2G23290 49.818 275 102 6 1 251 9 271 3.35e-76 234
MS.gene041934.t1 AT3G50060 48.727 275 107 6 2 251 3 268 9.00e-74 228
MS.gene041934.t1 AT3G55730 73.786 103 27 0 3 105 54 156 4.55e-50 170
MS.gene041934.t1 AT3G09230 48.634 183 82 3 2 179 52 227 4.60e-48 164
MS.gene041934.t1 AT2G39880 67.961 103 33 0 3 105 48 150 8.18e-47 160
MS.gene041934.t1 AT3G09370 54.128 109 50 0 2 110 127 235 2.68e-38 140
MS.gene041934.t1 AT3G09370 54.128 109 50 0 2 110 132 240 2.79e-38 140
MS.gene041934.t1 AT3G09370 54.128 109 50 0 2 110 140 248 3.58e-38 140
MS.gene041934.t1 AT1G69560 56.436 101 44 0 5 105 107 207 1.83e-37 135
MS.gene041934.t1 AT1G69560 56.436 101 44 0 5 105 123 223 2.42e-37 135
MS.gene041934.t1 AT1G26780 56.436 101 44 0 5 105 98 198 2.86e-37 133
MS.gene041934.t1 AT5G02320 50.459 109 54 0 4 112 66 174 2.98e-37 137
MS.gene041934.t1 AT3G29020 55.446 101 45 0 5 105 65 165 5.51e-37 131
MS.gene041934.t1 AT5G02320 50.459 109 54 0 4 112 126 234 5.72e-37 137
MS.gene041934.t1 AT5G02320 50.459 109 54 0 4 112 126 234 5.72e-37 137
MS.gene041934.t1 AT5G11510 49.541 109 55 0 4 112 80 188 5.76e-37 139
MS.gene041934.t1 AT5G11510 49.541 109 55 0 4 112 80 188 5.76e-37 139
MS.gene041934.t1 AT5G11510 49.541 109 55 0 4 112 80 188 5.76e-37 139
MS.gene041934.t1 AT5G11510 49.541 109 55 0 4 112 80 188 8.13e-37 139
MS.gene041934.t1 AT1G26780 56.436 101 44 0 5 105 98 198 8.66e-37 134
MS.gene041934.t1 AT5G11510 49.541 109 55 0 4 112 80 188 9.34e-37 139
MS.gene041934.t1 AT4G32730 52.294 109 52 0 4 112 86 194 9.67e-37 139
MS.gene041934.t1 AT4G32730 52.294 109 52 0 4 112 86 194 9.67e-37 139
MS.gene041934.t1 AT4G32730 52.294 109 52 0 4 112 86 194 9.67e-37 139
MS.gene041934.t1 AT4G32730 52.294 109 52 0 4 112 86 194 9.67e-37 139
MS.gene041934.t1 AT4G32730 52.294 109 52 0 4 112 86 194 1.12e-36 138
MS.gene041934.t1 AT5G17800 55.446 101 45 0 5 105 93 193 2.10e-36 132
MS.gene041934.t1 AT3G29020 55.446 101 45 0 5 105 67 167 2.36e-36 131
MS.gene041934.t1 AT1G17950 43.750 128 67 1 5 132 5 127 6.89e-35 126
MS.gene041934.t1 AT4G33450 48.696 115 58 1 5 118 19 133 6.91e-35 126
MS.gene041934.t1 AT3G27785 52.885 104 49 0 4 107 188 291 6.40e-34 128
MS.gene041934.t1 AT4G18770 51.818 110 48 1 4 108 216 325 8.13e-34 127
MS.gene041934.t1 AT1G73410 53.465 101 47 0 5 105 6 106 9.39e-34 122
MS.gene041934.t1 AT1G73410 53.465 101 47 0 5 105 6 106 1.27e-33 123
MS.gene041934.t1 AT5G11050 50.000 104 52 0 4 107 104 207 2.12e-33 126
MS.gene041934.t1 AT5G58850 45.528 123 60 1 4 119 104 226 2.75e-33 126
MS.gene041934.t1 AT5G60890 52.941 102 47 1 5 105 14 115 8.79e-31 117
MS.gene041934.t1 AT4G01680 54.902 102 45 1 5 105 14 115 1.89e-30 114
MS.gene041934.t1 AT5G10280 50.467 107 44 2 5 106 14 116 2.12e-30 116
MS.gene041934.t1 AT4G26930 53.465 101 46 1 5 104 21 121 2.21e-30 117
MS.gene041934.t1 AT5G39700 44.248 113 63 0 6 118 57 169 3.84e-30 112
MS.gene041934.t1 AT1G16490 40.217 184 91 4 5 175 16 193 4.22e-30 114
MS.gene041934.t1 AT5G56110 49.057 106 53 1 5 109 14 119 4.49e-30 115
MS.gene041934.t1 AT3G60460 53.922 102 45 2 5 104 13 114 8.96e-30 114
MS.gene041934.t1 AT4G01680 54.902 102 45 1 5 105 14 115 1.08e-29 114
MS.gene041934.t1 AT5G57620 52.427 103 47 2 5 105 14 116 5.76e-29 112
MS.gene041934.t1 AT1G09540 53.922 102 46 1 5 105 14 115 1.06e-28 112
MS.gene041934.t1 AT5G65230 50.980 102 49 1 5 105 14 115 1.12e-28 111
MS.gene041934.t1 AT5G40360 48.000 100 52 0 5 104 158 257 1.19e-28 112
MS.gene041934.t1 AT2G31180 45.455 121 55 3 5 118 14 130 1.85e-28 109
MS.gene041934.t1 AT3G61250 44.118 136 65 4 5 135 14 143 2.01e-28 110
MS.gene041934.t1 AT1G57560 52.941 102 47 1 5 105 14 115 2.04e-28 110
MS.gene041934.t1 AT5G26660 39.286 168 91 2 5 161 14 181 2.22e-28 111
MS.gene041934.t1 AT2G32460 50.000 102 50 1 5 105 20 121 2.48e-28 113
MS.gene041934.t1 AT1G57560 52.941 102 47 1 5 105 14 115 2.65e-28 110
MS.gene041934.t1 AT5G54230 50.980 102 49 1 5 105 14 115 2.72e-28 110
MS.gene041934.t1 AT1G18710 49.038 104 52 1 5 107 14 117 2.85e-28 109
MS.gene041934.t1 AT3G13890 50.476 105 51 1 5 108 14 118 2.90e-28 111
MS.gene041934.t1 AT4G28110 50.000 102 50 1 5 105 14 115 3.05e-28 109
MS.gene041934.t1 AT2G32460 50.000 102 50 1 5 105 8 109 3.20e-28 113
MS.gene041934.t1 AT1G34670 49.057 106 45 2 5 105 14 115 3.25e-28 111
MS.gene041934.t1 AT1G74430 49.038 104 52 1 5 107 14 117 3.40e-28 109
MS.gene041934.t1 AT3G11440 49.020 102 51 1 5 105 43 144 3.74e-28 112
MS.gene041934.t1 AT5G06100 49.020 102 51 1 5 105 34 135 4.32e-28 112
MS.gene041934.t1 AT3G48920 50.495 101 49 1 5 104 20 120 4.55e-28 108
MS.gene041934.t1 AT3G11440 49.020 102 51 1 5 105 43 144 5.68e-28 112
MS.gene041934.t1 AT3G11440 49.020 102 51 1 5 105 43 144 5.68e-28 112
MS.gene041934.t1 AT3G11440 49.020 102 51 1 5 105 43 144 5.68e-28 112
MS.gene041934.t1 AT5G12870 51.961 102 48 1 5 105 20 121 6.07e-28 108
MS.gene041934.t1 AT5G06100 49.020 102 51 1 5 105 34 135 6.12e-28 112
MS.gene041934.t1 AT5G06100 49.020 102 51 1 5 105 34 135 6.12e-28 112
MS.gene041934.t1 AT5G06100 49.020 102 51 1 5 105 34 135 6.12e-28 112
MS.gene041934.t1 AT5G06100 49.020 102 51 1 5 105 34 135 6.12e-28 112
MS.gene041934.t1 AT1G79180 46.847 111 58 1 5 114 16 126 7.49e-28 108
MS.gene041934.t1 AT4G17785 51.961 102 48 1 5 105 15 116 8.04e-28 110
MS.gene041934.t1 AT3G24310 46.087 115 61 1 5 118 20 134 8.98e-28 108
MS.gene041934.t1 AT1G56160 50.980 102 49 1 5 105 16 117 9.47e-28 108
MS.gene041934.t1 AT4G17785 51.961 102 48 1 5 105 15 116 1.04e-27 110
MS.gene041934.t1 AT3G30210 42.857 133 64 2 5 125 29 161 1.15e-27 108
MS.gene041934.t1 AT1G08810 47.414 116 51 3 5 115 14 124 1.37e-27 108
MS.gene041934.t1 AT2G36890 51.456 103 48 2 5 105 14 116 1.55e-27 108
MS.gene041934.t1 AT4G01680 49.123 114 45 2 5 105 14 127 1.59e-27 109
MS.gene041934.t1 AT3G12720 50.476 105 51 1 5 108 24 128 1.68e-27 108
MS.gene041934.t1 AT1G22640 35.233 193 105 5 5 188 14 195 2.04e-27 107
MS.gene041934.t1 AT1G63910 51.961 102 48 1 5 105 14 115 2.42e-27 109
MS.gene041934.t1 AT3G47600 44.094 127 53 4 5 117 14 136 2.60e-27 108
MS.gene041934.t1 AT1G18570 49.020 102 51 1 5 105 15 116 2.67e-27 108
MS.gene041934.t1 AT2G36890 51.456 103 48 2 5 105 55 157 2.89e-27 108
MS.gene041934.t1 AT5G52600 48.571 105 53 1 5 108 14 118 3.06e-27 105
MS.gene041934.t1 AT4G13480 48.077 104 53 1 5 107 8 111 3.07e-27 106
MS.gene041934.t1 AT3G02940 47.170 106 47 2 5 105 14 115 3.23e-27 107
MS.gene041934.t1 AT3G13890 47.368 114 50 2 5 108 14 127 3.32e-27 108
MS.gene041934.t1 AT5G65790 51.456 103 48 2 5 105 14 116 3.73e-27 108
MS.gene041934.t1 AT3G08500 51.961 102 48 1 5 105 32 133 3.97e-27 108
MS.gene041934.t1 AT4G05100 49.020 102 51 1 5 105 15 116 4.55e-27 107
MS.gene041934.t1 AT5G23000 51.456 103 48 2 5 105 14 116 4.79e-27 107
MS.gene041934.t1 AT4G25560 50.000 102 50 1 5 105 12 113 4.83e-27 106
MS.gene041934.t1 AT3G02940 48.039 102 52 1 5 105 14 115 5.60e-27 107
MS.gene041934.t1 AT3G02940 48.039 102 52 1 5 105 14 115 5.60e-27 107
MS.gene041934.t1 AT5G15310 48.039 102 52 1 5 105 14 115 6.67e-27 107
MS.gene041934.t1 AT5G59780 43.137 102 57 1 5 105 10 111 6.95e-27 105
MS.gene041934.t1 AT5G15310 48.039 102 52 1 5 105 14 115 7.10e-27 107
MS.gene041934.t1 AT5G15310 48.039 102 52 1 5 105 14 115 9.23e-27 105
MS.gene041934.t1 AT4G00540 48.148 108 53 1 5 109 103 210 9.44e-27 108
MS.gene041934.t1 AT5G55020 50.495 101 49 1 5 104 28 128 9.46e-27 109
MS.gene041934.t1 AT3G53200 50.980 102 49 1 5 105 11 112 1.02e-26 104
MS.gene041934.t1 AT3G01140 48.039 102 52 1 5 105 14 115 1.17e-26 107
MS.gene041934.t1 AT3G46130 44.118 102 56 1 5 105 11 112 1.18e-26 105
MS.gene041934.t1 AT4G21440 49.020 102 51 1 5 105 14 115 1.33e-26 106
MS.gene041934.t1 AT5G14750 46.078 102 54 1 5 105 18 119 1.48e-26 103
MS.gene041934.t1 AT4G00540 48.148 108 53 1 5 109 101 208 1.65e-26 107
MS.gene041934.t1 AT3G28470 50.515 97 47 1 5 100 14 110 1.66e-26 105
MS.gene041934.t1 AT3G01140 48.039 102 52 1 5 105 57 158 1.72e-26 107
MS.gene041934.t1 AT4G37780 50.000 106 51 2 5 108 14 119 1.78e-26 105
MS.gene041934.t1 AT5G16770 47.170 106 47 2 5 105 14 115 1.81e-26 105
MS.gene041934.t1 AT5G16770 47.170 106 47 2 5 105 14 115 1.81e-26 105
MS.gene041934.t1 AT2G16720 49.020 102 51 1 5 105 14 115 1.87e-26 104
MS.gene041934.t1 AT3G23250 38.095 147 78 3 5 142 14 156 1.89e-26 105
MS.gene041934.t1 AT5G07690 50.495 101 49 1 5 104 14 114 2.01e-26 106
MS.gene041934.t1 AT5G61420 50.000 102 50 1 5 105 14 115 2.08e-26 106
MS.gene041934.t1 AT3G49690 50.485 103 49 2 5 105 14 116 2.15e-26 105
MS.gene041934.t1 AT1G35515 37.107 159 88 5 5 162 14 161 2.26e-26 103
MS.gene041934.t1 AT5G40330 46.078 102 54 1 5 105 14 115 2.30e-26 103
MS.gene041934.t1 AT5G16770 47.170 106 47 2 5 105 14 115 2.90e-26 105
MS.gene041934.t1 AT5G16770 47.170 106 47 2 5 105 14 115 2.90e-26 105
MS.gene041934.t1 AT4G09460 50.000 102 50 1 5 105 14 115 3.20e-26 103
MS.gene041934.t1 AT4G38620 50.000 102 50 1 5 105 14 115 3.80e-26 104
MS.gene041934.t1 AT1G74080 50.485 103 49 2 5 106 14 115 3.80e-26 105
MS.gene041934.t1 AT5G62470 43.750 112 63 0 5 116 14 125 4.54e-26 105
MS.gene041934.t1 AT1G74650 47.170 106 47 2 5 105 14 115 4.89e-26 105
MS.gene041934.t1 AT4G34990 50.000 102 50 1 5 105 14 115 5.42e-26 103
MS.gene041934.t1 AT5G62470 43.590 117 57 2 5 116 14 126 7.34e-26 104
MS.gene041934.t1 AT5G07700 49.020 102 51 1 5 105 14 115 8.14e-26 104
MS.gene041934.t1 AT5G07700 49.020 102 51 1 5 105 14 115 8.14e-26 104
MS.gene041934.t1 AT3G28910 47.170 106 47 2 5 105 14 115 8.51e-26 104
MS.gene041934.t1 AT3G27920 47.059 102 53 1 5 105 16 117 9.10e-26 102
MS.gene041934.t1 AT3G13540 46.226 106 56 1 1 105 21 126 1.07e-25 102
MS.gene041934.t1 AT2G26960 49.505 101 50 1 5 104 22 122 1.97e-25 104
MS.gene041934.t1 AT1G66230 34.031 191 99 6 5 181 14 191 2.07e-25 102
MS.gene041934.t1 AT3G27810 33.838 198 107 6 5 199 22 198 3.24e-25 100
MS.gene041934.t1 AT5G14340 45.098 102 55 1 5 105 26 127 5.05e-25 101
MS.gene041934.t1 AT1G06180 47.170 106 47 2 5 105 14 115 5.82e-25 100
MS.gene041934.t1 AT4G22680 47.170 106 47 2 5 105 14 115 8.68e-25 100
MS.gene041934.t1 AT5G49330 43.750 128 67 3 5 127 14 141 9.42e-25 101
MS.gene041934.t1 AT3G12820 49.020 102 51 1 5 105 16 117 1.03e-24 99.4
MS.gene041934.t1 AT3G62610 44.860 107 58 1 5 110 14 120 1.12e-24 101
MS.gene041934.t1 AT2G25230 45.545 101 53 2 5 104 26 125 1.18e-24 99.4
MS.gene041934.t1 AT1G25340 41.176 102 59 1 5 105 20 121 1.93e-24 99.8
MS.gene041934.t1 AT1G25340 41.584 101 55 1 5 105 20 116 1.94e-24 99.8
MS.gene041934.t1 AT1G25340 41.584 101 55 1 5 105 20 116 2.69e-24 99.8
MS.gene041934.t1 AT5G16600 47.170 106 47 2 5 105 14 115 3.74e-24 99.8
MS.gene041934.t1 AT2G47460 44.860 107 58 1 5 110 14 120 5.49e-24 100
MS.gene041934.t1 AT5G40350 42.017 119 63 2 5 117 19 137 5.55e-24 97.1
MS.gene041934.t1 AT4G12350 46.226 106 48 2 5 105 14 115 6.05e-24 98.6
MS.gene041934.t1 AT3G01530 45.545 101 54 1 5 104 27 127 1.40e-23 95.5
MS.gene041934.t1 AT2G47190 43.810 105 58 1 2 105 19 123 1.63e-23 97.1
MS.gene041934.t1 AT5G35550 45.098 102 55 1 5 105 16 117 1.85e-23 96.7
MS.gene041934.t1 AT1G68320 41.176 102 59 1 5 105 21 122 2.67e-23 96.7
MS.gene041934.t1 AT5G52260 48.039 102 52 1 5 105 14 115 3.64e-23 95.9
MS.gene041934.t1 AT1G79180 35.135 148 54 2 5 114 16 159 4.18e-23 97.1
MS.gene041934.t1 AT1G48000 43.564 101 56 1 5 104 34 134 1.04e-22 94.4
MS.gene041934.t1 AT2G02820 40.816 98 58 0 8 105 33 130 1.02e-21 93.2
MS.gene041934.t1 AT5G62320 44.144 111 50 3 5 105 15 123 1.13e-21 91.3
MS.gene041934.t1 AT2G26950 43.564 101 48 2 5 100 18 114 1.14e-21 93.6
MS.gene041934.t1 AT2G02820 40.404 99 59 0 8 106 33 131 1.39e-21 94.0
MS.gene041934.t1 AT2G02820 40.816 98 58 0 8 105 33 130 1.66e-21 94.0
MS.gene041934.t1 AT1G66370 41.176 102 59 1 5 105 10 111 3.75e-21 90.1
MS.gene041934.t1 AT5G14750 52.941 68 32 0 38 105 18 85 7.66e-21 87.4
MS.gene041934.t1 AT5G26660 38.060 134 73 1 38 161 17 150 3.33e-20 89.0
MS.gene041934.t1 AT5G40430 39.806 103 61 1 2 104 51 152 4.93e-20 87.4
MS.gene041934.t1 AT5G49620 39.516 124 70 2 1 123 24 143 6.15e-20 87.8
MS.gene041934.t1 AT3G06490 40.323 124 69 2 1 123 17 136 9.16e-20 87.8
MS.gene041934.t1 AT1G14350 36.036 111 71 0 8 118 28 138 9.79e-20 88.6
MS.gene041934.t1 AT1G14350 36.036 111 71 0 8 118 28 138 9.79e-20 88.6
MS.gene041934.t1 AT3G27810 32.927 164 87 5 38 199 7 149 9.83e-20 84.7
MS.gene041934.t1 AT3G53200 55.882 68 30 0 38 105 12 79 1.55e-19 84.7
MS.gene041934.t1 AT5G59780 48.529 68 35 0 38 105 23 90 2.10e-19 84.7
MS.gene041934.t1 AT3G46130 48.529 68 35 0 38 105 13 80 4.71e-19 84.0
MS.gene041934.t1 AT3G46130 48.529 68 35 0 38 105 23 90 4.85e-19 84.0
MS.gene041934.t1 AT1G66380 43.137 102 57 1 5 105 10 111 6.73e-19 81.3
MS.gene041934.t1 AT5G35550 54.412 68 31 0 38 105 53 120 7.78e-19 84.0
MS.gene041934.t1 AT1G56650 40.496 121 67 3 5 121 10 129 1.68e-18 82.8
MS.gene041934.t1 AT3G12820 52.941 68 32 0 38 105 2 69 2.52e-18 81.3
MS.gene041934.t1 AT5G40350 43.529 85 43 1 38 117 8 92 3.12e-18 80.5
MS.gene041934.t1 AT1G66390 43.137 102 57 1 5 105 10 111 5.85e-18 81.3
MS.gene041934.t1 AT3G47600 46.067 89 39 2 38 117 42 130 1.04e-17 82.0
MS.gene041934.t1 AT3G18100 41.489 94 55 0 5 98 546 639 8.57e-17 80.5
MS.gene041934.t1 AT3G18100 41.489 94 55 0 5 98 498 591 8.82e-17 80.5
MS.gene041934.t1 AT3G18100 41.489 94 55 0 5 98 385 478 1.16e-16 80.1
MS.gene041934.t1 AT3G18100 41.489 94 55 0 5 98 333 426 1.18e-16 80.1
MS.gene041934.t1 AT1G71030 50.769 65 32 0 41 105 5 69 1.97e-16 75.9
MS.gene041934.t1 AT1G71030 50.769 65 32 0 41 105 19 83 1.98e-16 76.3
MS.gene041934.t1 AT5G49620 35.507 138 70 3 1 123 24 157 2.40e-16 78.2
MS.gene041934.t1 AT1G22640 32.432 148 81 4 49 188 2 138 2.25e-14 70.5
MS.gene041934.t1 AT1G18960 35.849 106 64 3 3 107 8 110 7.50e-14 70.9
MS.gene041934.t1 AT2G37630 38.298 94 55 1 8 98 7 100 8.71e-14 70.9
MS.gene041934.t1 AT5G14750 46.552 58 31 0 49 106 2 59 3.43e-13 65.9
MS.gene041934.t1 AT5G14750 46.552 58 31 0 49 106 2 59 3.43e-13 65.9
MS.gene041934.t1 AT1G66380 44.156 77 43 0 29 105 2 78 1.41e-12 63.2

Find 87 sgRNAs with CRISPR-Local

Find 91 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATTTGAGTGGTGAATTTA+TGG 0.181948 8.4:-25754822 MS.gene041934:CDS
GGTTCTGATTTAAGTGATTC+TGG 0.192097 8.4:-25755097 MS.gene041934:CDS
ACTATAGCCCGTTTGTTATC+TGG 0.242963 8.4:-25755262 MS.gene041934:CDS
CTAAGCCAATTGGGATTAAC+AGG 0.244446 8.4:-25754700 MS.gene041934:CDS
GTTAAGGATTCGTCTTCTTC+GGG 0.287725 8.4:+25755475 None:intergenic
TGTTAAGGATTCGTCTTCTT+CGG 0.294025 8.4:+25755474 None:intergenic
CTCTGCTTCCGTCGGTGCTC+CGG 0.310058 8.4:-25755131 MS.gene041934:CDS
GAAAGCGACAGCGAAGTTAA+AGG 0.313723 8.4:+25754965 None:intergenic
ATAATGATGTTATCTTCTTC+AGG 0.320050 8.4:+25755319 None:intergenic
ATCGTTACGGTCCTCGTAAC+TGG 0.325319 8.4:-25755441 MS.gene041934:CDS
GGTGCTCCGGGGAGTCCTTC+TGG 0.325422 8.4:-25755118 MS.gene041934:CDS
CTCATCAGCCGTGCTATTCC+TGG 0.326073 8.4:-25755415 MS.gene041934:CDS
GCAGAAGTGGTAAATCTTGC+AGG 0.345819 8.4:-25755393 MS.gene041934:CDS
GTTTCTGAAGAAGCTGGAAT+TGG 0.358307 8.4:-25754851 MS.gene041934:CDS
TCTGCTTCCGTCGGTGCTCC+GGG 0.359058 8.4:-25755130 MS.gene041934:CDS
AATGTTTCTGCTAAGCCAAT+TGG 0.360539 8.4:-25754710 MS.gene041934:CDS
GAATGAAGTGAGGAGTTATA+TGG 0.362886 8.4:-25754777 MS.gene041934:CDS
ATTGGGATTAACAGGGTTGA+TGG 0.384025 8.4:-25754692 MS.gene041934:CDS
GGTTACGGTGCCGGAGGCAG+TGG 0.397430 8.4:-25755002 MS.gene041934:CDS
ATGCTCAGTTCGGTAACAAA+TGG 0.411906 8.4:-25755288 MS.gene041934:CDS
CGCCGCCACTGAAGCCGTTA+CGG 0.422898 8.4:+25754877 None:intergenic
ACAGGCAAACGAATCGGAAC+AGG 0.431816 8.4:+25755055 None:intergenic
GGCTCCGATGTAGTTTCAAC+AGG 0.447468 8.4:+25755037 None:intergenic
ATGTTTCTGCTAAGCCAATT+GGG 0.449436 8.4:-25754709 MS.gene041934:CDS
TCGTCTTCTTCGGGGCTCCA+TGG 0.449510 8.4:+25755484 None:intergenic
AGTTATATGGAAGAGAGAAA+TGG 0.450100 8.4:-25754764 MS.gene041934:CDS
TCAACCCTGTTAATCCCAAT+TGG 0.450454 8.4:+25754695 None:intergenic
TCGCTGTCGCTTTCTCTACC+AGG 0.454968 8.4:-25754956 MS.gene041934:CDS
GGCGATGGAGGTTACGGTGC+CGG 0.456055 8.4:-25755011 MS.gene041934:CDS
GCCGGAGGCGATGGAGGTTA+CGG 0.475996 8.4:-25755017 MS.gene041934:CDS
TACATCGGAGCCGGAGGCGA+TGG 0.477002 8.4:-25755026 MS.gene041934:CDS
TGCTCAGTTCGGTAACAAAT+GGG 0.477514 8.4:-25755287 MS.gene041934:CDS
GGATGCTGCTATGGCGGTGC+CGG 0.490839 8.4:-25754930 MS.gene041934:CDS
ATCAGAGCCCATGCTCAGTT+CGG 0.492188 8.4:-25755298 MS.gene041934:CDS
ACAAAACTCGTTGATCGTTA+CGG 0.493663 8.4:-25755454 MS.gene041934:CDS
GGTGCCGGAGGCAGTGGAGG+AGG 0.494219 8.4:-25754996 MS.gene041934:CDS
GTTGTTGGAGGAGCACTAAC+CGG 0.494691 8.4:+25754911 None:intergenic
CGGTTCGGCCAGATAACAAA+CGG 0.495375 8.4:+25755254 None:intergenic
ACCAGGTGTGGATGCTGCTA+TGG 0.501396 8.4:-25754939 MS.gene041934:CDS
ATTTGTTACCGAACTGAGCA+TGG 0.503627 8.4:+25755290 None:intergenic
ACGGCAGTTACAGCGGTTGT+TGG 0.506684 8.4:+25754896 None:intergenic
TACGGTGCCGGAGGCAGTGG+AGG 0.513406 8.4:-25754999 MS.gene041934:CDS
CGGAAGTGTTCGTCTTTCAT+CGG 0.515164 8.4:-25755193 MS.gene041934:CDS
GTTTCAACAGGCAAACGAAT+CGG 0.515533 8.4:+25755049 None:intergenic
CACAAAATGGATCGGATCAA+AGG 0.516697 8.4:-25755508 None:intergenic
ACCGTAACCTCCATCGCCTC+CGG 0.524352 8.4:+25755016 None:intergenic
TCATCCTCCTCCACTGCCTC+CGG 0.526186 8.4:+25754992 None:intergenic
AGGACTCCCCGGAGCACCGA+CGG 0.528402 8.4:+25755123 None:intergenic
CAAGATTTACCACTTCTGCC+AGG 0.532045 8.4:+25755397 None:intergenic
CTTAAACGCTCTGCTTCCGT+CGG 0.532792 8.4:-25755139 MS.gene041934:CDS
GCGAAAGTTTCTGAAGAAGC+TGG 0.536187 8.4:-25754857 MS.gene041934:CDS
GCAGTTACAGCGGTTGTTGG+AGG 0.537888 8.4:+25754899 None:intergenic
ACTGGAATTCGACACTGAAA+CGG 0.538291 8.4:-25755213 MS.gene041934:CDS
TCAGAACCAGAAGGACTCCC+CGG 0.552415 8.4:+25755112 None:intergenic
GCAGAGCGTTTAAGCGGCTG+AGG 0.554004 8.4:+25755148 None:intergenic
TGCCGTAACGGCTTCAGTGG+CGG 0.554136 8.4:-25754879 MS.gene041934:CDS
AGGATTGAAATCACGATCAT+CGG 0.558324 8.4:+25755168 None:intergenic
AACCGCTGTAACTGCCGTAA+CGG 0.559234 8.4:-25754891 MS.gene041934:CDS
TGTTGAAACTACATCGGAGC+CGG 0.564862 8.4:-25755035 MS.gene041934:CDS
GTAAATCTTGCAGGCTGAGA+TGG 0.565392 8.4:-25755384 MS.gene041934:CDS
AGATGATTAAGAATGAAGTG+AGG 0.584929 8.4:-25754787 MS.gene041934:CDS
TTTGTTACCGAACTGAGCAT+GGG 0.585042 8.4:+25755291 None:intergenic
GTCGCTTTCTCTACCAGGTG+TGG 0.586924 8.4:-25754951 MS.gene041934:CDS
GCCATAGCAGCATCCACACC+TGG 0.588348 8.4:+25754938 None:intergenic
GGTTCGGCCAGATAACAAAC+GGG 0.592402 8.4:+25755255 None:intergenic
ATCGGAGCCGGAGGCGATGG+AGG 0.592565 8.4:-25755023 MS.gene041934:CDS
AACTGCCGTAACGGCTTCAG+TGG 0.600528 8.4:-25754882 MS.gene041934:CDS
TGGATCGGATCAAAGGTCCA+TGG 0.602703 8.4:-25755501 MS.gene041934:CDS
GAGGCAGTGGAGGAGGATGA+CGG 0.602949 8.4:-25754989 MS.gene041934:CDS
TCATCACTCACAAAATGGAT+CGG 0.604942 8.4:-25755516 None:intergenic
TTTGAGTGGTGAATTTATGG+CGG 0.605749 8.4:-25754819 MS.gene041934:CDS
CGTGCTATTCCTGGCAGAAG+TGG 0.606057 8.4:-25755406 MS.gene041934:CDS
GTTTCAGTGTCGAATTCCAG+TGG 0.610246 8.4:+25755215 None:intergenic
AAAGCACGATGCTCAACTTG+AGG 0.613981 8.4:+25755346 None:intergenic
TTAAGGATTCGTCTTCTTCG+GGG 0.616493 8.4:+25755476 None:intergenic
TTTGCCTGTTGAAACTACAT+CGG 0.619768 8.4:-25755041 MS.gene041934:CDS
CACTTCTGCCAGGAATAGCA+CGG 0.635899 8.4:+25755407 None:intergenic
CTGCTTCCGTCGGTGCTCCG+GGG 0.641525 8.4:-25755129 MS.gene041934:CDS
ACGGAAGCAGAGCGTTTAAG+CGG 0.643836 8.4:+25755142 None:intergenic
GATGGAGGTTACGGTGCCGG+AGG 0.646652 8.4:-25755008 MS.gene041934:CDS
ATTGGAGCGTTAAATTTGAG+TGG 0.650281 8.4:-25754833 MS.gene041934:CDS
AGCCGTTACGGCAGTTACAG+CGG 0.654298 8.4:+25754889 None:intergenic
AGGTGTGGATGCTGCTATGG+CGG 0.655299 8.4:-25754936 MS.gene041934:CDS
TGAAACTACATCGGAGCCGG+AGG 0.656246 8.4:-25755032 MS.gene041934:CDS
TCACTTAAATCAGAACCAGA+AGG 0.658744 8.4:+25755103 None:intergenic
TAAGCCAATTGGGATTAACA+GGG 0.674454 8.4:-25754699 MS.gene041934:CDS
CTGATGAGTGACCAGTTACG+AGG 0.676012 8.4:+25755430 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AAATTTGAGTGGTGAATTTA+TGG - chr8.4:25755368-25755387 MS.gene041934:CDS 25.0%
! ATAATGATGTTATCTTCTTC+AGG + chr8.4:25754874-25754893 None:intergenic 25.0%
AGATGATTAAGAATGAAGTG+AGG - chr8.4:25755403-25755422 MS.gene041934:CDS 30.0%
AGTTATATGGAAGAGAGAAA+TGG - chr8.4:25755426-25755445 MS.gene041934:CDS 30.0%
! AGAAATGGAATGTGTTTTCA+AGG - chr8.4:25755441-25755460 MS.gene041934:CDS 30.0%
ACAAAACTCGTTGATCGTTA+CGG - chr8.4:25754736-25754755 MS.gene041934:CDS 35.0%
AGGATTGAAATCACGATCAT+CGG + chr8.4:25755025-25755044 None:intergenic 35.0%
ATAACGCTATCAAAAACCAC+TGG - chr8.4:25754959-25754978 MS.gene041934:CDS 35.0%
GAATGAAGTGAGGAGTTATA+TGG - chr8.4:25755413-25755432 MS.gene041934:CDS 35.0%
TAAGCCAATTGGGATTAACA+GGG - chr8.4:25755491-25755510 MS.gene041934:CDS 35.0%
TCACTTAAATCAGAACCAGA+AGG + chr8.4:25755090-25755109 None:intergenic 35.0%
TGTTAAGGATTCGTCTTCTT+CGG + chr8.4:25754719-25754738 None:intergenic 35.0%
TTTGAGTGGTGAATTTATGG+CGG - chr8.4:25755371-25755390 MS.gene041934:CDS 35.0%
TTTGCCTGTTGAAACTACAT+CGG - chr8.4:25755149-25755168 MS.gene041934:CDS 35.0%
! AATGTTTCTGCTAAGCCAAT+TGG - chr8.4:25755480-25755499 MS.gene041934:CDS 35.0%
! ATGTTTCTGCTAAGCCAATT+GGG - chr8.4:25755481-25755500 MS.gene041934:CDS 35.0%
! ATTGGAGCGTTAAATTTGAG+TGG - chr8.4:25755357-25755376 MS.gene041934:CDS 35.0%
! GGTTCTGATTTAAGTGATTC+TGG - chr8.4:25755093-25755112 MS.gene041934:CDS 35.0%
!! TGTGTTTTCAAGGAGTTGAT+AGG - chr8.4:25755451-25755470 MS.gene041934:CDS 35.0%
!!! ACGATCAACGAGTTTTGTTA+AGG + chr8.4:25754734-25754753 None:intergenic 35.0%
!!! GTGGTTTTTGATAGCGTTAT+CGG + chr8.4:25754959-25754978 None:intergenic 35.0%
!!! TTTTGATAGCGTTATCGGTT+CGG + chr8.4:25754954-25754973 None:intergenic 35.0%
ACTGGAATTCGACACTGAAA+CGG - chr8.4:25754977-25754996 MS.gene041934:CDS 40.0%
ATGCTCAGTTCGGTAACAAA+TGG - chr8.4:25754902-25754921 MS.gene041934:CDS 40.0%
ATTGGGATTAACAGGGTTGA+TGG - chr8.4:25755498-25755517 MS.gene041934:CDS 40.0%
CTAAGCCAATTGGGATTAAC+AGG - chr8.4:25755490-25755509 MS.gene041934:CDS 40.0%
GTTAAGGATTCGTCTTCTTC+GGG + chr8.4:25754718-25754737 None:intergenic 40.0%
GTTTCAACAGGCAAACGAAT+CGG + chr8.4:25755144-25755163 None:intergenic 40.0%
TCAACCCTGTTAATCCCAAT+TGG + chr8.4:25755498-25755517 None:intergenic 40.0%
TGCTCAGTTCGGTAACAAAT+GGG - chr8.4:25754903-25754922 MS.gene041934:CDS 40.0%
TTAAGGATTCGTCTTCTTCG+GGG + chr8.4:25754717-25754736 None:intergenic 40.0%
TTTGTTACCGAACTGAGCAT+GGG + chr8.4:25754902-25754921 None:intergenic 40.0%
! ATTTGTTACCGAACTGAGCA+TGG + chr8.4:25754903-25754922 None:intergenic 40.0%
! GTTTCTGAAGAAGCTGGAAT+TGG - chr8.4:25755339-25755358 MS.gene041934:CDS 40.0%
!! ACTATAGCCCGTTTGTTATC+TGG - chr8.4:25754928-25754947 MS.gene041934:CDS 40.0%
AAAGCACGATGCTCAACTTG+AGG + chr8.4:25754847-25754866 None:intergenic 45.0%
CAAGATTTACCACTTCTGCC+AGG + chr8.4:25754796-25754815 None:intergenic 45.0%
GAAAGCGACAGCGAAGTTAA+AGG + chr8.4:25755228-25755247 None:intergenic 45.0%
GCAGAAGTGGTAAATCTTGC+AGG - chr8.4:25754797-25754816 MS.gene041934:CDS 45.0%
GTAAATCTTGCAGGCTGAGA+TGG - chr8.4:25754806-25754825 MS.gene041934:CDS 45.0%
TGTTGAAACTACATCGGAGC+CGG - chr8.4:25755155-25755174 MS.gene041934:CDS 45.0%
! GCGAAAGTTTCTGAAGAAGC+TGG - chr8.4:25755333-25755352 MS.gene041934:CDS 45.0%
! GTTTCAGTGTCGAATTCCAG+TGG + chr8.4:25754978-25754997 None:intergenic 45.0%
!! CGGAAGTGTTCGTCTTTCAT+CGG - chr8.4:25754997-25755016 MS.gene041934:CDS 45.0%
AACCGCTGTAACTGCCGTAA+CGG - chr8.4:25755299-25755318 MS.gene041934:CDS 50.0%
ACAGGCAAACGAATCGGAAC+AGG + chr8.4:25755138-25755157 None:intergenic 50.0%
ATCAGAGCCCATGCTCAGTT+CGG - chr8.4:25754892-25754911 MS.gene041934:CDS 50.0%
ATCGTTACGGTCCTCGTAAC+TGG - chr8.4:25754749-25754768 MS.gene041934:CDS 50.0%
CACTTCTGCCAGGAATAGCA+CGG + chr8.4:25754786-25754805 None:intergenic 50.0%
CTGATGAGTGACCAGTTACG+AGG + chr8.4:25754763-25754782 None:intergenic 50.0%
CTTAAACGCTCTGCTTCCGT+CGG - chr8.4:25755051-25755070 MS.gene041934:CDS 50.0%
GGCTCCGATGTAGTTTCAAC+AGG + chr8.4:25755156-25755175 None:intergenic 50.0%
GGTTCGGCCAGATAACAAAC+GGG + chr8.4:25754938-25754957 None:intergenic 50.0%
TGGATCGGATCAAAGGTCCA+TGG - chr8.4:25754689-25754708 MS.gene041934:CDS 50.0%
! ACGGAAGCAGAGCGTTTAAG+CGG + chr8.4:25755051-25755070 None:intergenic 50.0%
! CGGTTCGGCCAGATAACAAA+CGG + chr8.4:25754939-25754958 None:intergenic 50.0%
!! GTTGTTGGAGGAGCACTAAC+CGG + chr8.4:25755282-25755301 None:intergenic 50.0%
AACTGCCGTAACGGCTTCAG+TGG - chr8.4:25755308-25755327 MS.gene041934:CDS 55.0%
ACCAGGTGTGGATGCTGCTA+TGG - chr8.4:25755251-25755270 MS.gene041934:CDS 55.0%
ACGGCAGTTACAGCGGTTGT+TGG + chr8.4:25755297-25755316 None:intergenic 55.0%
AGCCGTTACGGCAGTTACAG+CGG + chr8.4:25755304-25755323 None:intergenic 55.0%
AGGTGTGGATGCTGCTATGG+CGG - chr8.4:25755254-25755273 MS.gene041934:CDS 55.0%
GCAGTTACAGCGGTTGTTGG+AGG + chr8.4:25755294-25755313 None:intergenic 55.0%
TCAGAACCAGAAGGACTCCC+CGG + chr8.4:25755081-25755100 None:intergenic 55.0%
TGAAACTACATCGGAGCCGG+AGG - chr8.4:25755158-25755177 MS.gene041934:CDS 55.0%
! CGTGCTATTCCTGGCAGAAG+TGG - chr8.4:25754784-25754803 MS.gene041934:CDS 55.0%
! CTCATCAGCCGTGCTATTCC+TGG - chr8.4:25754775-25754794 MS.gene041934:CDS 55.0%
! GTCGCTTTCTCTACCAGGTG+TGG - chr8.4:25755239-25755258 MS.gene041934:CDS 55.0%
!! TCGCTGTCGCTTTCTCTACC+AGG - chr8.4:25755234-25755253 MS.gene041934:CDS 55.0%
ACCGTAACCTCCATCGCCTC+CGG + chr8.4:25755177-25755196 None:intergenic 60.0%
GAGGCAGTGGAGGAGGATGA+CGG - chr8.4:25755201-25755220 MS.gene041934:CDS 60.0%
GCCATAGCAGCATCCACACC+TGG + chr8.4:25755255-25755274 None:intergenic 60.0%
TCATCCTCCTCCACTGCCTC+CGG + chr8.4:25755201-25755220 None:intergenic 60.0%
TCGTCTTCTTCGGGGCTCCA+TGG + chr8.4:25754709-25754728 None:intergenic 60.0%
TGCCGTAACGGCTTCAGTGG+CGG - chr8.4:25755311-25755330 MS.gene041934:CDS 60.0%
! GCAGAGCGTTTAAGCGGCTG+AGG + chr8.4:25755045-25755064 None:intergenic 60.0%
CGCCGCCACTGAAGCCGTTA+CGG + chr8.4:25755316-25755335 None:intergenic 65.0%
GCCGGAGGCGATGGAGGTTA+CGG - chr8.4:25755173-25755192 MS.gene041934:CDS 65.0%
GGATGCTGCTATGGCGGTGC+CGG - chr8.4:25755260-25755279 MS.gene041934:CDS 65.0%
GGCGATGGAGGTTACGGTGC+CGG - chr8.4:25755179-25755198 MS.gene041934:CDS 65.0%
TACATCGGAGCCGGAGGCGA+TGG - chr8.4:25755164-25755183 MS.gene041934:CDS 65.0%
! CTCTGCTTCCGTCGGTGCTC+CGG - chr8.4:25755059-25755078 MS.gene041934:CDS 65.0%
! GATGGAGGTTACGGTGCCGG+AGG - chr8.4:25755182-25755201 MS.gene041934:CDS 65.0%
! TCTGCTTCCGTCGGTGCTCC+GGG - chr8.4:25755060-25755079 MS.gene041934:CDS 65.0%
ATCGGAGCCGGAGGCGATGG+AGG - chr8.4:25755167-25755186 MS.gene041934:CDS 70.0%
GGTGCTCCGGGGAGTCCTTC+TGG - chr8.4:25755072-25755091 MS.gene041934:CDS 70.0%
! CTGCTTCCGTCGGTGCTCCG+GGG - chr8.4:25755061-25755080 MS.gene041934:CDS 70.0%
! GGTTACGGTGCCGGAGGCAG+TGG - chr8.4:25755188-25755207 MS.gene041934:CDS 70.0%
! TACGGTGCCGGAGGCAGTGG+AGG - chr8.4:25755191-25755210 MS.gene041934:CDS 70.0%
!! AGGACTCCCCGGAGCACCGA+CGG + chr8.4:25755070-25755089 None:intergenic 70.0%
! GGTGCCGGAGGCAGTGGAGG+AGG - chr8.4:25755194-25755213 MS.gene041934:CDS 75.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 25754688 25755524 25754688 ID=MS.gene041934
chr8.4 mRNA 25754688 25755524 25754688 ID=MS.gene041934.t1;Parent=MS.gene041934
chr8.4 exon 25754688 25755524 25754688 ID=MS.gene041934.t1.exon1;Parent=MS.gene041934.t1
chr8.4 CDS 25754688 25755524 25754688 ID=cds.MS.gene041934.t1;Parent=MS.gene041934.t1
Gene Sequence

>MS.gene041934

ATGGATCGGATCAAAGGTCCATGGAGCCCCGAAGAAGACGAATCCTTAACAAAACTCGTTGATCGTTACGGTCCTCGTAACTGGTCACTCATCAGCCGTGCTATTCCTGGCAGAAGTGGTAAATCTTGCAGGCTGAGATGGTGTAATCAGCTTTCTCCTCAAGTTGAGCATCGTGCTTTTTCTCCTGAAGAAGATAACATCATTATCAGAGCCCATGCTCAGTTCGGTAACAAATGGGCTACTATAGCCCGTTTGTTATCTGGCCGAACCGATAACGCTATCAAAAACCACTGGAATTCGACACTGAAACGGAAGTGTTCGTCTTTCATCGGTTCCGATGATCGTGATTTCAATCCTCAGCCGCTTAAACGCTCTGCTTCCGTCGGTGCTCCGGGGAGTCCTTCTGGTTCTGATTTAAGTGATTCTGGTGTTCAAACTGTTTTTCGTCCTGTTCCGATTCGTTTGCCTGTTGAAACTACATCGGAGCCGGAGGCGATGGAGGTTACGGTGCCGGAGGCAGTGGAGGAGGATGACGGTCCTTTAACTTCGCTGTCGCTTTCTCTACCAGGTGTGGATGCTGCTATGGCGGTGCCGGTTAGTGCTCCTCCAACAACCGCTGTAACTGCCGTAACGGCTTCAGTGGCGGCGAAAGTTTCTGAAGAAGCTGGAATTGGAGCGTTAAATTTGAGTGGTGAATTTATGGCGGTTATGCAAGAGATGATTAAGAATGAAGTGAGGAGTTATATGGAAGAGAGAAATGGAATGTGTTTTCAAGGAGTTGATAGGCTTAGAAATGTTTCTGCTAAGCCAATTGGGATTAACAGGGTTGATGGATGA
Protein sequence

>MS.gene041934.t1

MDRIKGPWSPEEDESLTKLVDRYGPRNWSLISRAIPGRSGKSCRLRWCNQLSPQVEHRAFSPEEDNIIIRAHAQFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSFIGSDDRDFNPQPLKRSASVGAPGSPSGSDLSDSGVQTVFRPVPIRLPVETTSEPEAMEVTVPEAVEEDDGPLTSLSLSLPGVDAAMAVPVSAPPTTAVTAVTASVAAKVSEEAGIGALNLSGEFMAVMQEMIKNEVRSYMEERNGMCFQGVDRLRNVSAKPIGINRVDG