AlfalfaGEDB | MS.gene04197

M. sativa cultivar XinJiangDaYe / MS.gene04197

KEGG: K08065
GO: GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0005575 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0046982 GO:0046983 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0110165 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00808.26

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene04197.t1	GAU44342.1	93.7	189	8	2	1	189	1	185	2.50E-89	338.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene04197.t1	Q9FGJ3	83.6	122	20	0	1	122	1	122	1.3e-51	204.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene04197.t1	A0A2Z6P713	93.7	189	8	2	1	189	1	185	1.8e-89	338.2

TFs/TRs:

Gene ID	Type	Classification
MS.gene04197.t1	TF	NF-YB

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene04197.t1	MTR_3g058980	97.895	190	3	1	1	189	1	190	1.42e-135	377
MS.gene04197.t1	MTR_5g095740	77.202	193	31	6	1	189	1	184	8.35e-93	268
MS.gene04197.t1	MTR_2g026710	80.328	122	14	1	1	122	1	112	1.11e-65	199
MS.gene04197.t1	MTR_7g061270	73.684	133	24	3	13	135	9	140	9.55e-63	192
MS.gene04197.t1	MTR_7g100650	73.684	133	24	3	13	135	9	140	2.28e-62	191
MS.gene04197.t1	MTR_8g091720	73.438	128	32	1	23	150	24	149	1.14e-61	190
MS.gene04197.t1	MTR_1g072790	67.939	131	40	1	1	129	1	131	1.11e-60	187
MS.gene04197.t1	MTR_8g093920	84.536	97	15	0	26	122	39	135	1.15e-58	183
MS.gene04197.t1	MTR_4g133938	71.074	121	27	1	1	121	1	113	4.42e-58	179
MS.gene04197.t1	MTR_4g133952	52.532	158	60	4	21	178	52	194	3.29e-50	162
MS.gene04197.t1	MTR_1g088860	71.875	96	27	0	26	121	35	130	5.23e-50	160
MS.gene04197.t1	MTR_0392s0020	62.727	110	38	1	13	122	7	113	1.02e-48	155
MS.gene04197.t1	MTR_4g119500	67.010	97	32	0	26	122	21	117	2.33e-48	154
MS.gene04197.t1	MTR_1g039040	68.421	95	30	0	26	120	5	99	5.16e-47	152
MS.gene04197.t1	MTR_1g083070	61.957	92	35	0	27	118	4	95	5.78e-39	130
MS.gene04197.t1	MTR_1g029070	51.579	95	46	0	26	120	51	145	5.91e-29	105
MS.gene04197.t1	MTR_5g095900	47.368	95	47	1	24	115	10	104	2.46e-23	91.7
MS.gene04197.t1	MTR_1g029100	43.421	76	43	0	32	107	7	82	1.40e-19	79.3
MS.gene04197.t1	MTR_1g028480	53.125	64	30	0	57	120	19	82	5.53e-19	78.6
MS.gene04197.t1	MTR_4g112380	36.250	80	51	0	28	107	12	91	6.41e-16	71.6
MS.gene04197.t1	MTR_2g056000	34.000	100	65	1	28	126	42	141	7.32e-16	72.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene04197.t1	AT4G14540	86.400	125	11	2	1	125	1	119	2.14e-72	216
MS.gene04197.t1	AT5G47640	83.607	122	20	0	1	122	1	122	6.09e-68	206
MS.gene04197.t1	AT2G37060	54.974	191	61	6	1	184	1	173	4.47e-60	185
MS.gene04197.t1	AT2G37060	54.974	191	61	6	1	184	1	173	4.47e-60	185
MS.gene04197.t1	AT2G37060	54.974	191	61	6	1	184	1	173	4.47e-60	185
MS.gene04197.t1	AT3G53340	79.592	98	20	0	23	120	25	122	4.92e-57	177
MS.gene04197.t1	AT3G53340	79.592	98	20	0	23	120	25	122	4.92e-57	177
MS.gene04197.t1	AT2G38880	71.667	120	28	2	1	120	1	114	5.57e-57	176
MS.gene04197.t1	AT2G38880	71.667	120	28	2	1	120	1	114	7.64e-57	176
MS.gene04197.t1	AT2G38880	71.667	120	28	2	1	120	1	114	7.64e-57	176
MS.gene04197.t1	AT2G38880	71.667	120	28	2	1	120	1	114	7.64e-57	176
MS.gene04197.t1	AT3G53340	80.208	96	19	0	23	118	25	120	6.65e-56	174
MS.gene04197.t1	AT3G53340	80.208	96	19	0	23	118	25	120	6.65e-56	174
MS.gene04197.t1	AT2G13570	81.443	97	18	0	26	122	35	131	3.22e-55	174
MS.gene04197.t1	AT2G38880	71.795	117	27	2	1	117	1	111	3.31e-55	171
MS.gene04197.t1	AT3G53340	78.947	95	20	0	23	117	25	119	3.37e-55	171
MS.gene04197.t1	AT2G38880	72.414	116	26	2	1	116	1	110	8.21e-55	171
MS.gene04197.t1	AT2G38880	71.795	117	27	2	1	117	1	111	8.92e-55	171
MS.gene04197.t1	AT2G38880	71.795	117	27	2	1	117	1	111	8.92e-55	171
MS.gene04197.t1	AT2G38880	71.795	117	27	2	1	117	1	111	8.92e-55	171
MS.gene04197.t1	AT2G38880	71.795	117	27	2	1	117	1	111	2.46e-54	170
MS.gene04197.t1	AT2G38880	71.795	117	27	2	1	117	1	111	2.46e-54	170
MS.gene04197.t1	AT5G47670	64.545	110	39	0	16	125	18	127	2.02e-50	162
MS.gene04197.t1	AT2G47810	71.717	99	28	0	23	121	47	145	2.28e-50	160
MS.gene04197.t1	AT5G47670	64.545	110	39	0	16	125	47	156	4.73e-50	162
MS.gene04197.t1	AT5G47670	64.545	110	39	0	16	125	47	156	4.73e-50	162
MS.gene04197.t1	AT1G21970	61.386	101	39	0	26	126	58	158	2.06e-45	150
MS.gene04197.t1	AT1G09030	60.417	96	38	0	27	122	3	98	3.88e-42	138
MS.gene04197.t1	AT5G08190	35.354	99	62	2	27	123	11	109	9.74e-18	76.6
MS.gene04197.t1	AT5G23090	33.673	98	63	2	28	123	12	109	3.99e-17	75.1
MS.gene04197.t1	AT5G08190	38.272	81	50	0	27	107	11	91	5.22e-17	74.7
MS.gene04197.t1	AT5G23090	37.179	78	49	0	28	105	12	89	1.66e-16	73.6
MS.gene04197.t1	AT5G23090	37.179	78	49	0	28	105	12	89	1.66e-16	73.6
MS.gene04197.t1	AT5G23090	37.179	78	49	0	28	105	12	89	1.66e-16	73.6
MS.gene04197.t1	AT5G23090	37.097	62	39	0	44	105	15	76	4.05e-12	61.6
MS.gene04197.t1	AT2G27470	34.091	88	53	1	32	114	11	98	1.36e-11	62.0

Find 73 sgRNAs with CRISPR-Local

Find 71 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAGGGTGGGCCTGGGTATCC+TGG	0.171258	3.3:+48303481	MS.gene04197:CDS
CCCCTTAAGAAATGTCTATC+TGG	0.241386	3.3:-48303527	None:intergenic
GGGCCTGGGTATCCTGGGCC+TGG	0.280888	3.3:+48303487	MS.gene04197:CDS
AAGGTTATCTTCAGAGGTTT+AGG	0.283842	3.3:+48303287	MS.gene04197:CDS
CTTTGGGCGATGACGACGTT+GGG	0.306849	3.3:+48303238	MS.gene04197:CDS
ATCCTGCTTACGTTTGCTAT+TGG	0.314552	3.3:-48303061	None:intergenic
CAACGGCGATGATTTGCTTT+GGG	0.342319	3.3:+48303222	MS.gene04197:CDS
CAGGGACACGTGTATGGTTC+TGG	0.350044	3.3:+48303430	MS.gene04197:CDS
CTTCTCTCGCTGACACTTAT+CGG	0.356219	3.3:-48303188	None:intergenic
TGGTGGGTTTCATCAAGTTA+TGG	0.357962	3.3:+48303456	MS.gene04197:CDS
GAGAGTGGTGGTTGTGGTGG+TGG	0.377791	3.3:+48303391	MS.gene04197:CDS
TCAACGGCGATGATTTGCTT+TGG	0.384468	3.3:+48303221	MS.gene04197:CDS
AGGGTGGGCCTGGGTATCCT+GGG	0.386249	3.3:+48303482	MS.gene04197:CDS
AGTGGTGGTTGTGGTGGTGG+TGG	0.388204	3.3:+48303394	MS.gene04197:CDS
AGGTTATCTTCAGAGGTTTA+GGG	0.388502	3.3:+48303288	MS.gene04197:CDS
GGTGGGTTTCATCAAGTTAT+GGG	0.401138	3.3:+48303457	MS.gene04197:CDS
GGCCTGGGTATCCTGGGCCT+GGG	0.402305	3.3:+48303488	MS.gene04197:CDS
GTTATGGGTAAGGGTGGGCC+TGG	0.416967	3.3:+48303472	MS.gene04197:CDS
TTTGAGATCTTCGCGTTCGC+TGG	0.427710	3.3:-48303100	None:intergenic
GTGTATGGTTCTGGTGGTGG+TGG	0.434372	3.3:+48303439	MS.gene04197:CDS
CACGTGTATGGTTCTGGTGG+TGG	0.446845	3.3:+48303436	MS.gene04197:CDS
TCCTCCACCGTGTGGTCCGC+CGG	0.453036	3.3:-48302987	None:intergenic
ATGCATCAGGGACACGTGTA+TGG	0.456937	3.3:+48303424	MS.gene04197:CDS
CCTGGGCCTGGGTCTAATAC+TGG	0.461983	3.3:+48303499	MS.gene04197:CDS
GGAGATGGAAGGAGAGAAGA+CGG	0.462758	3.3:+48303309	MS.gene04197:CDS
TCTTCAGAGGTTTAGGGAGA+TGG	0.465400	3.3:+48303294	MS.gene04197:CDS
TGGTCCGCCGGAGTCGTTGT+CGG	0.473319	3.3:-48302975	None:intergenic
TTCCAATAGCAAACGTAAGC+AGG	0.483654	3.3:+48303059	MS.gene04197:CDS
TCTTATGAGAGTGGTGGTTG+TGG	0.483921	3.3:+48303385	MS.gene04197:CDS
TGGTGGAGTTATGATGCATC+AGG	0.485483	3.3:+48303411	MS.gene04197:CDS
TGCTTACGTTTGCTATTGGA+AGG	0.497410	3.3:-48303057	None:intergenic
CCCTTAAGAAATGTCTATCT+GGG	0.498089	3.3:-48303526	None:intergenic
GTTTCATCAAGTTATGGGTA+AGG	0.498474	3.3:+48303462	MS.gene04197:CDS
TTATGGGTAAGGGTGGGCCT+GGG	0.517687	3.3:+48303473	MS.gene04197:CDS
CGTTTGCTATTGGAAGGAAT+CGG	0.519562	3.3:-48303051	None:intergenic
GATGACGACGTTGGGGTTCG+AGG	0.521900	3.3:+48303246	MS.gene04197:CDS
CGTGATAAAGACGCGCCGCA+AGG	0.530875	3.3:+48303340	MS.gene04197:CDS
CCAGTATTAGACCCAGGCCC+AGG	0.531565	3.3:-48303499	None:intergenic
CTTTGAAAGGTTATCTTCAG+AGG	0.533426	3.3:+48303281	MS.gene04197:CDS
AATAATAGTTCTTATGAGAG+TGG	0.535058	3.3:+48303376	MS.gene04197:CDS
GCGGACTCCGACAACGACTC+CGG	0.535824	3.3:+48302968	MS.gene04197:CDS
ACACTTATCGGAGGCTTCGC+CGG	0.538515	3.3:-48303176	None:intergenic
TATGAGAGTGGTGGTTGTGG+TGG	0.545135	3.3:+48303388	MS.gene04197:CDS
GAGTATGTTGAGCCTTTGAA+AGG	0.547673	3.3:+48303268	MS.gene04197:CDS
GACCCAGGCCCAGGATACCC+AGG	0.548272	3.3:-48303490	None:intergenic
TCCGGCGGACCACACGGTGG+AGG	0.550895	3.3:+48302986	MS.gene04197:CDS
TGTATGGTTCTGGTGGTGGT+GGG	0.552197	3.3:+48303440	MS.gene04197:CDS
GAGTTCATCAGCTTCATCAC+CGG	0.553474	3.3:+48303157	MS.gene04197:CDS
GCTTTGGGCGATGACGACGT+TGG	0.557062	3.3:+48303237	MS.gene04197:CDS
GAGAAGCGGAAGACGATCAA+CGG	0.557275	3.3:+48303205	MS.gene04197:CDS
CAGAGGTTTAGGGAGATGGA+AGG	0.558997	3.3:+48303298	MS.gene04197:CDS
AACGACTCCGGCGGACCACA+CGG	0.560333	3.3:+48302980	MS.gene04197:CDS
CATCAAGTTATGGGTAAGGG+TGG	0.563450	3.3:+48303466	MS.gene04197:CDS
ATAAGTGTCAGCGAGAGAAG+CGG	0.570892	3.3:+48303191	MS.gene04197:CDS
CTCTGAAGATAACCTTTCAA+AGG	0.578661	3.3:-48303280	None:intergenic
GATGGAAGGAGAGAAGACGG+TGG	0.584396	3.3:+48303312	MS.gene04197:CDS
TTTCATCAAGTTATGGGTAA+GGG	0.591667	3.3:+48303463	MS.gene04197:CDS
ATCAAGTTATGGGTAAGGGT+GGG	0.596245	3.3:+48303467	MS.gene04197:CDS
ATGGAAGGAGAGAAGACGGT+GGG	0.602363	3.3:+48303313	MS.gene04197:CDS
AGGAATCGGTCTTGTTCTCG+TGG	0.605753	3.3:-48303037	None:intergenic
GGCCTGGGTCTAATACTGGT+AGG	0.607014	3.3:+48303503	MS.gene04197:CDS
AATAGTTCTTATGAGAGTGG+TGG	0.624003	3.3:+48303379	MS.gene04197:CDS
TTTGGGCGATGACGACGTTG+GGG	0.632604	3.3:+48303239	MS.gene04197:CDS
GAAGATCTCAAAAGACGCAA+AGG	0.638772	3.3:+48303111	MS.gene04197:CDS
GACTCCGACAACGACTCCGG+CGG	0.639609	3.3:+48302971	MS.gene04197:CDS
CTCTCGCTGACACTTATCGG+AGG	0.641421	3.3:-48303185	None:intergenic
GGTGGAGGATCAAACGCACA+TGG	0.660348	3.3:+48303001	MS.gene04197:CDS
TTAACACTATTAGAACCTTG+CGG	0.662763	3.3:-48303355	None:intergenic
GGACACGTGTATGGTTCTGG+TGG	0.663222	3.3:+48303433	MS.gene04197:CDS
GGCCTACCAGTATTAGACCC+AGG	0.676497	3.3:-48303505	None:intergenic
GACTCCGGCGGACCACACGG+TGG	0.713555	3.3:+48302983	MS.gene04197:CDS
GGTGGAGTTATGATGCATCA+GGG	0.718962	3.3:+48303412	MS.gene04197:CDS
GCGTTTGATCCTCCACCGTG+TGG	0.738876	3.3:-48302995	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	AATAATAGTTCTTATGAGAG+TGG	+	chr3.3:48303376-48303395	MS.gene04197:CDS	25.0%
	TTAACACTATTAGAACCTTG+CGG	-	chr3.3:48303358-48303377	None:intergenic	30.0%
	TTTCATCAAGTTATGGGTAA+GGG	+	chr3.3:48303463-48303482	MS.gene04197:CDS	30.0%
	AAGGTTATCTTCAGAGGTTT+AGG	+	chr3.3:48303287-48303306	MS.gene04197:CDS	35.0%
	AATAGTTCTTATGAGAGTGG+TGG	+	chr3.3:48303379-48303398	MS.gene04197:CDS	35.0%
	AGGTTATCTTCAGAGGTTTA+GGG	+	chr3.3:48303288-48303307	MS.gene04197:CDS	35.0%
	GTTTCATCAAGTTATGGGTA+AGG	+	chr3.3:48303462-48303481	MS.gene04197:CDS	35.0%
!	CTCTGAAGATAACCTTTCAA+AGG	-	chr3.3:48303283-48303302	None:intergenic	35.0%
!	CTTTGAAAGGTTATCTTCAG+AGG	+	chr3.3:48303281-48303300	MS.gene04197:CDS	35.0%
	ATCAAGTTATGGGTAAGGGT+GGG	+	chr3.3:48303467-48303486	MS.gene04197:CDS	40.0%
	GAAGATCTCAAAAGACGCAA+AGG	+	chr3.3:48303111-48303130	MS.gene04197:CDS	40.0%
	GAGTATGTTGAGCCTTTGAA+AGG	+	chr3.3:48303268-48303287	MS.gene04197:CDS	40.0%
	TTCCAATAGCAAACGTAAGC+AGG	+	chr3.3:48303059-48303078	MS.gene04197:CDS	40.0%
!	GGTGGGTTTCATCAAGTTAT+GGG	+	chr3.3:48303457-48303476	MS.gene04197:CDS	40.0%
!!	ATCCTGCTTACGTTTGCTAT+TGG	-	chr3.3:48303064-48303083	None:intergenic	40.0%
!!	CGTTTGCTATTGGAAGGAAT+CGG	-	chr3.3:48303054-48303073	None:intergenic	40.0%
!!	TGCTTACGTTTGCTATTGGA+AGG	-	chr3.3:48303060-48303079	None:intergenic	40.0%
!!	TGGTGGGTTTCATCAAGTTA+TGG	+	chr3.3:48303456-48303475	MS.gene04197:CDS	40.0%
	ATAAGTGTCAGCGAGAGAAG+CGG	+	chr3.3:48303191-48303210	MS.gene04197:CDS	45.0%
	CATCAAGTTATGGGTAAGGG+TGG	+	chr3.3:48303466-48303485	MS.gene04197:CDS	45.0%
	CTTCTCTCGCTGACACTTAT+CGG	-	chr3.3:48303191-48303210	None:intergenic	45.0%
	GAGTTCATCAGCTTCATCAC+CGG	+	chr3.3:48303157-48303176	MS.gene04197:CDS	45.0%
	GGTGGAGTTATGATGCATCA+GGG	+	chr3.3:48303412-48303431	MS.gene04197:CDS	45.0%
	TCTTATGAGAGTGGTGGTTG+TGG	+	chr3.3:48303385-48303404	MS.gene04197:CDS	45.0%
	TCTTCAGAGGTTTAGGGAGA+TGG	+	chr3.3:48303294-48303313	MS.gene04197:CDS	45.0%
	TGGTGGAGTTATGATGCATC+AGG	+	chr3.3:48303411-48303430	MS.gene04197:CDS	45.0%
!!	CAACGGCGATGATTTGCTTT+GGG	+	chr3.3:48303222-48303241	MS.gene04197:CDS	45.0%
!!	TCAACGGCGATGATTTGCTT+TGG	+	chr3.3:48303221-48303240	MS.gene04197:CDS	45.0%
	ATGCATCAGGGACACGTGTA+TGG	+	chr3.3:48303424-48303443	MS.gene04197:CDS	50.0%
	ATGGAAGGAGAGAAGACGGT+GGG	+	chr3.3:48303313-48303332	MS.gene04197:CDS	50.0%
	CAGAGGTTTAGGGAGATGGA+AGG	+	chr3.3:48303298-48303317	MS.gene04197:CDS	50.0%
	GAGAAGCGGAAGACGATCAA+CGG	+	chr3.3:48303205-48303224	MS.gene04197:CDS	50.0%
	GGAGATGGAAGGAGAGAAGA+CGG	+	chr3.3:48303309-48303328	MS.gene04197:CDS	50.0%
	TATGAGAGTGGTGGTTGTGG+TGG	+	chr3.3:48303388-48303407	MS.gene04197:CDS	50.0%
!	TTTGAGATCTTCGCGTTCGC+TGG	-	chr3.3:48303103-48303122	None:intergenic	50.0%
!!	AGGAATCGGTCTTGTTCTCG+TGG	-	chr3.3:48303040-48303059	None:intergenic	50.0%
!!	TGTATGGTTCTGGTGGTGGT+GGG	+	chr3.3:48303440-48303459	MS.gene04197:CDS	50.0%
	ACACTTATCGGAGGCTTCGC+CGG	-	chr3.3:48303179-48303198	None:intergenic	55.0%
	CAGGGACACGTGTATGGTTC+TGG	+	chr3.3:48303430-48303449	MS.gene04197:CDS	55.0%
	CTCTCGCTGACACTTATCGG+AGG	-	chr3.3:48303188-48303207	None:intergenic	55.0%
	CTTTGGGCGATGACGACGTT+GGG	+	chr3.3:48303238-48303257	MS.gene04197:CDS	55.0%
	GATGGAAGGAGAGAAGACGG+TGG	+	chr3.3:48303312-48303331	MS.gene04197:CDS	55.0%
	GGCCTACCAGTATTAGACCC+AGG	-	chr3.3:48303508-48303527	None:intergenic	55.0%
	GGCCTGGGTCTAATACTGGT+AGG	+	chr3.3:48303503-48303522	MS.gene04197:CDS	55.0%
	GGTGGAGGATCAAACGCACA+TGG	+	chr3.3:48303001-48303020	MS.gene04197:CDS	55.0%
	TTATGGGTAAGGGTGGGCCT+GGG	+	chr3.3:48303473-48303492	MS.gene04197:CDS	55.0%
	TTTGGGCGATGACGACGTTG+GGG	+	chr3.3:48303239-48303258	MS.gene04197:CDS	55.0%
!!	CACGTGTATGGTTCTGGTGG+TGG	+	chr3.3:48303436-48303455	MS.gene04197:CDS	55.0%
!!	GGACACGTGTATGGTTCTGG+TGG	+	chr3.3:48303433-48303452	MS.gene04197:CDS	55.0%
!!	GTGTATGGTTCTGGTGGTGG+TGG	+	chr3.3:48303439-48303458	MS.gene04197:CDS	55.0%
	CCAGTATTAGACCCAGGCCC+AGG	-	chr3.3:48303502-48303521	None:intergenic	60.0%
	CCTGGGCCTGGGTCTAATAC+TGG	+	chr3.3:48303499-48303518	MS.gene04197:CDS	60.0%
	CGTGATAAAGACGCGCCGCA+AGG	+	chr3.3:48303340-48303359	MS.gene04197:CDS	60.0%
	GAGAGTGGTGGTTGTGGTGG+TGG	+	chr3.3:48303391-48303410	MS.gene04197:CDS	60.0%
	GATGACGACGTTGGGGTTCG+AGG	+	chr3.3:48303246-48303265	MS.gene04197:CDS	60.0%
	GCGTTTGATCCTCCACCGTG+TGG	-	chr3.3:48302998-48303017	None:intergenic	60.0%
	GTTATGGGTAAGGGTGGGCC+TGG	+	chr3.3:48303472-48303491	MS.gene04197:CDS	60.0%
!	GCTTTGGGCGATGACGACGT+TGG	+	chr3.3:48303237-48303256	MS.gene04197:CDS	60.0%
!!	AGTGGTGGTTGTGGTGGTGG+TGG	+	chr3.3:48303394-48303413	MS.gene04197:CDS	60.0%
	AACGACTCCGGCGGACCACA+CGG	+	chr3.3:48302980-48302999	MS.gene04197:CDS	65.0%
	AAGGGTGGGCCTGGGTATCC+TGG	+	chr3.3:48303481-48303500	MS.gene04197:CDS	65.0%
	AGGGTGGGCCTGGGTATCCT+GGG	+	chr3.3:48303482-48303501	MS.gene04197:CDS	65.0%
	GACTCCGACAACGACTCCGG+CGG	+	chr3.3:48302971-48302990	MS.gene04197:CDS	65.0%
	GCGGACTCCGACAACGACTC+CGG	+	chr3.3:48302968-48302987	MS.gene04197:CDS	65.0%
	TGGTCCGCCGGAGTCGTTGT+CGG	-	chr3.3:48302978-48302997	None:intergenic	65.0%
	GACCCAGGCCCAGGATACCC+AGG	-	chr3.3:48303493-48303512	None:intergenic	70.0%
	GGCCTGGGTATCCTGGGCCT+GGG	+	chr3.3:48303488-48303507	MS.gene04197:CDS	70.0%
	TCCTCCACCGTGTGGTCCGC+CGG	-	chr3.3:48302990-48303009	None:intergenic	70.0%
	GACTCCGGCGGACCACACGG+TGG	+	chr3.3:48302983-48303002	MS.gene04197:CDS	75.0%
	GGGCCTGGGTATCCTGGGCC+TGG	+	chr3.3:48303487-48303506	MS.gene04197:CDS	75.0%
	TCCGGCGGACCACACGGTGG+AGG	+	chr3.3:48302986-48303005	MS.gene04197:CDS	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.3	gene	48302965	48303534	48302965	ID=MS.gene04197
chr3.3	mRNA	48302965	48303534	48302965	ID=MS.gene04197.t1;Parent=MS.gene04197
chr3.3	exon	48302965	48303534	48302965	ID=MS.gene04197.t1.exon1;Parent=MS.gene04197.t1
chr3.3	CDS	48302965	48303534	48302965	ID=cds.MS.gene04197.t1;Parent=MS.gene04197.t1

Gene Sequence

>MS.gene04197

ATGGCGGACTCCGACAACGACTCCGGCGGACCACACGGTGGAGGATCAAACGCACATGGAAGCGAGATGTCACCACGAGAACAAGACCGATTCCTTCCAATAGCAAACGTAAGCAGGATCATGAAAAAAGCACTACCAGCGAACGCGAAGATCTCAAAAGACGCAAAGGAAACAGTTCAAGAGTGTGTTTCAGAGTTCATCAGCTTCATCACCGGCGAAGCCTCCGATAAGTGTCAGCGAGAGAAGCGGAAGACGATCAACGGCGATGATTTGCTTTGGGCGATGACGACGTTGGGGTTCGAGGAGTATGTTGAGCCTTTGAAAGGTTATCTTCAGAGGTTTAGGGAGATGGAAGGAGAGAAGACGGTGGGAGCGCGTGATAAAGACGCGCCGCAAGGTTCTAATAGTGTTAATAATAGTTCTTATGAGAGTGGTGGTTGTGGTGGTGGTGGAGTTATGATGCATCAGGGACACGTGTATGGTTCTGGTGGTGGTGGGTTTCATCAAGTTATGGGTAAGGGTGGGCCTGGGTATCCTGGGCCTGGGTCTAATACTGGTAGGCCCAGATAG

Protein sequence

>MS.gene04197.t1

MADSDNDSGGPHGGGSNAHGSEMSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKGYLQRFREMEGEKTVGARDKDAPQGSNSVNNSSYESGGCGGGGVMMHQGHVYGSGGGGFHQVMGKGGPGYPGPGSNTGRPR