Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042055.t1 | Q40359.1 | 99.6 | 257 | 1 | 0 | 1 | 257 | 1 | 257 | 3.20E-140 | 507.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042055.t1 | Q40359 | 99.6 | 257 | 1 | 0 | 1 | 257 | 1 | 257 | 7.7e-143 | 507.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042055.t1 | A0A072UTR5 | 98.8 | 257 | 2 | 1 | 1 | 257 | 1 | 256 | 3.0e-140 | 507.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene042055.t1 | TF | Alfin-like |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042055.t1 | MTR_4g134510 | 99.611 | 257 | 0 | 1 | 1 | 257 | 1 | 256 | 0.0 | 532 |
| MS.gene042055.t1 | MTR_8g019520 | 71.311 | 244 | 70 | 0 | 10 | 253 | 9 | 252 | 4.33e-111 | 320 |
| MS.gene042055.t1 | MTR_8g019520 | 69.796 | 245 | 73 | 1 | 10 | 253 | 9 | 253 | 4.58e-111 | 320 |
| MS.gene042055.t1 | MTR_1g015185 | 67.589 | 253 | 75 | 2 | 10 | 255 | 10 | 262 | 3.77e-105 | 305 |
| MS.gene042055.t1 | MTR_2g040990 | 68.548 | 248 | 69 | 4 | 10 | 255 | 12 | 252 | 2.24e-104 | 303 |
| MS.gene042055.t1 | MTR_2g099500 | 67.194 | 253 | 77 | 2 | 1 | 253 | 1 | 247 | 3.25e-103 | 300 |
| MS.gene042055.t1 | MTR_7g068590 | 62.302 | 252 | 84 | 5 | 4 | 255 | 1 | 241 | 1.73e-93 | 275 |
| MS.gene042055.t1 | MTR_4g015830 | 62.302 | 252 | 82 | 6 | 4 | 255 | 1 | 239 | 7.22e-92 | 271 |
| MS.gene042055.t1 | MTR_1g015185 | 84.444 | 135 | 21 | 0 | 10 | 144 | 10 | 144 | 7.83e-72 | 219 |
| MS.gene042055.t1 | MTR_8g066480 | 41.912 | 136 | 59 | 3 | 121 | 255 | 29 | 145 | 3.73e-19 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042055.t1 | AT2G02470 | 79.151 | 259 | 46 | 5 | 1 | 255 | 1 | 255 | 3.38e-130 | 369 |
| MS.gene042055.t1 | AT1G14510 | 78.656 | 253 | 49 | 3 | 1 | 253 | 1 | 248 | 5.05e-128 | 363 |
| MS.gene042055.t1 | AT2G02470 | 76.744 | 258 | 45 | 5 | 1 | 255 | 1 | 246 | 4.23e-124 | 353 |
| MS.gene042055.t1 | AT5G20510 | 67.568 | 259 | 80 | 3 | 1 | 255 | 1 | 259 | 8.47e-112 | 322 |
| MS.gene042055.t1 | AT3G42790 | 66.275 | 255 | 80 | 3 | 1 | 255 | 1 | 249 | 1.02e-108 | 314 |
| MS.gene042055.t1 | AT5G05610 | 63.347 | 251 | 79 | 5 | 5 | 255 | 3 | 240 | 1.67e-95 | 280 |
| MS.gene042055.t1 | AT5G05610 | 63.347 | 251 | 79 | 5 | 5 | 255 | 3 | 240 | 1.67e-95 | 280 |
| MS.gene042055.t1 | AT5G26210 | 67.331 | 251 | 72 | 3 | 10 | 255 | 9 | 254 | 5.03e-93 | 275 |
| MS.gene042055.t1 | AT3G11200 | 63.137 | 255 | 84 | 4 | 1 | 255 | 1 | 245 | 7.37e-89 | 263 |
| MS.gene042055.t1 | AT5G20510 | 66.512 | 215 | 68 | 3 | 45 | 255 | 4 | 218 | 5.49e-86 | 255 |
| MS.gene042055.t1 | AT2G02470 | 82.927 | 164 | 24 | 3 | 1 | 164 | 1 | 160 | 2.61e-85 | 255 |
| MS.gene042055.t1 | AT5G20510 | 73.171 | 164 | 42 | 2 | 1 | 162 | 1 | 164 | 2.86e-75 | 227 |
| MS.gene042055.t1 | AT3G11200 | 62.844 | 218 | 71 | 4 | 38 | 255 | 25 | 232 | 6.53e-75 | 228 |
Find 75 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCGCTGTTGCTTTCTATTT+TGG | 0.091188 | 8.3:-261548 | MS.gene042055:CDS |
| AAGGAGAATTTGTGCCTCTA+TGG | 0.272744 | 8.3:-261722 | MS.gene042055:CDS |
| GTTCAGAGCTATCCAATTCT+TGG | 0.273239 | 8.3:+259261 | None:intergenic |
| ATTATGGCACCGATGAATTC+TGG | 0.291624 | 8.3:-259395 | MS.gene042055:CDS |
| TTCACTTCCCATGTTTCATT+TGG | 0.302703 | 8.3:+261695 | None:intergenic |
| TTTGGTGCCCGCTTTGGATT+TGG | 0.319624 | 8.3:-261530 | MS.gene042055:CDS |
| TTGGATTTGGTAAGAATGAT+AGG | 0.350809 | 8.3:-261517 | MS.gene042055:intron |
| TCTTCAACAGTTCGAGGTAC+TGG | 0.366061 | 8.3:+262639 | None:intergenic |
| ACATCTTCACACCCTTGGTC+TGG | 0.386000 | 8.3:+259508 | None:intergenic |
| TCAGGAGGCACTTCCTCAAC+AGG | 0.419078 | 8.3:+261668 | None:intergenic |
| ACAGTCTTTGAGCTTGCAAC+AGG | 0.426181 | 8.3:-259725 | MS.gene042055:CDS |
| GGTGCTTGTGGTGATAATTA+TGG | 0.428882 | 8.3:-259411 | MS.gene042055:CDS |
| CATTGGGTATAAACTTTGCT+CGG | 0.446703 | 8.3:-261631 | MS.gene042055:CDS |
| AGTATCAAGAAGCCAAGAAT+TGG | 0.452358 | 8.3:-259273 | MS.gene042055:CDS |
| AAAACTTCTTCAACAGTTCG+AGG | 0.455840 | 8.3:+262633 | None:intergenic |
| AATGCTGGCTCGGGAAGTTC+AGG | 0.456279 | 8.3:+261650 | None:intergenic |
| CTGTCAACCTCTTCTTTGAC+CGG | 0.460633 | 8.3:+259480 | None:intergenic |
| GGCTTCTTGATACTGCAGCC+AGG | 0.465655 | 8.3:+259282 | None:intergenic |
| TGAACTTCCCGAGCCAGCAT+TGG | 0.471886 | 8.3:-261648 | MS.gene042055:CDS |
| GTTTATACCCAATGCTGGCT+CGG | 0.475497 | 8.3:+261640 | None:intergenic |
| CTTTGCTCGGGATGGAATGC+AGG | 0.478727 | 8.3:-261618 | MS.gene042055:CDS |
| GGTTGACAGTGGAGAAGAAG+AGG | 0.483798 | 8.3:-259466 | MS.gene042055:CDS |
| TGCAGACATCTTCACACCCT+TGG | 0.486335 | 8.3:+259503 | None:intergenic |
| CATCTTCACACCCTTGGTCT+GGG | 0.494259 | 8.3:+259509 | None:intergenic |
| AGGAGAATTTGTGCCTCTAT+GGG | 0.495200 | 8.3:-261721 | MS.gene042055:CDS |
| GAACTTCCCGAGCCAGCATT+GGG | 0.495975 | 8.3:-261647 | MS.gene042055:CDS |
| TTGATGTGTTCAGCCTTGGC+AGG | 0.497341 | 8.3:+259318 | None:intergenic |
| CTTCAACAGTTCGAGGTACT+GGG | 0.497593 | 8.3:+262640 | None:intergenic |
| TTGATCAAAGCTCTCACTAC+TGG | 0.498155 | 8.3:-262582 | MS.gene042055:intron |
| GGTATAAACTTTGCTCGGGA+TGG | 0.501826 | 8.3:-261626 | MS.gene042055:CDS |
| TTGCTTGATGTGTTCAGCCT+TGG | 0.502589 | 8.3:+259314 | None:intergenic |
| TTTATACCCAATGCTGGCTC+GGG | 0.504159 | 8.3:+261641 | None:intergenic |
| ATTGGGTATAAACTTTGCTC+GGG | 0.520391 | 8.3:-261630 | MS.gene042055:CDS |
| AGTGAGAGCTTTGATCAAAC+CGG | 0.520678 | 8.3:+262587 | None:intergenic |
| CATTGTTGTGAGCAGTCAGT+TGG | 0.529254 | 8.3:+259681 | None:intergenic |
| GCTTCTTGATACTGCAGCCA+GGG | 0.530817 | 8.3:+259283 | None:intergenic |
| ACTAACCGGGATCGCAGAGC+TGG | 0.531212 | 8.3:+262446 | None:intergenic |
| AAATTGAAATTGAGGATGGA+AGG | 0.531943 | 8.3:-262675 | None:intergenic |
| GAAATTGAGGATGGAAGGAA+TGG | 0.537738 | 8.3:-262670 | None:intergenic |
| CCTTGGTCTGGGATTCAGAC+TGG | 0.538724 | 8.3:+259520 | None:intergenic |
| TTGCAGTTCACAGTGACTCA+TGG | 0.543636 | 8.3:-261574 | MS.gene042055:CDS |
| GTTGTGATATGTGCGAGAAA+TGG | 0.560529 | 8.3:-259368 | MS.gene042055:CDS |
| TTTCATTTGGAAACCCATAG+AGG | 0.561848 | 8.3:+261708 | None:intergenic |
| GCAAAGTTTATACCCAATGC+TGG | 0.563847 | 8.3:+261635 | None:intergenic |
| GGAGAAGGACTGGTTATCAC+TGG | 0.565404 | 8.3:-261597 | MS.gene042055:CDS |
| TCGGGATGGAATGCAGGAGA+AGG | 0.567649 | 8.3:-261612 | MS.gene042055:CDS |
| ATGGGTTTCCAAATGAAACA+TGG | 0.572525 | 8.3:-261703 | MS.gene042055:CDS |
| ATTATCACCACAAGCACCAC+AGG | 0.573675 | 8.3:+259416 | None:intergenic |
| ATCAAGCAATACAAGTGCCC+TGG | 0.578416 | 8.3:-259300 | MS.gene042055:CDS |
| GGTCTGGGATTCAGACTGGC+GGG | 0.580455 | 8.3:+259524 | None:intergenic |
| TGTTAAAATTACTCCTGCCA+AGG | 0.581201 | 8.3:-259331 | MS.gene042055:CDS |
| ATGGAATGCAGGAGAAGGAC+TGG | 0.581252 | 8.3:-261607 | MS.gene042055:CDS |
| CAAATACAAATCAAGTGGAA+AGG | 0.584281 | 8.3:-259648 | MS.gene042055:intron |
| TGTTGCAAGCTCAAAGACTG+TGG | 0.590482 | 8.3:+259727 | None:intergenic |
| ATTCTTACCAAATCCAAAGC+GGG | 0.591224 | 8.3:+261523 | None:intergenic |
| AATAGCAAATACAAATCAAG+TGG | 0.591787 | 8.3:-259653 | MS.gene042055:CDS |
| GTCTGCACCGGTCAAAGAAG+AGG | 0.597402 | 8.3:-259487 | MS.gene042055:CDS |
| TGGTCTGGGATTCAGACTGG+CGG | 0.601563 | 8.3:+259523 | None:intergenic |
| GGGTGTGAAGATGTCTGCAC+CGG | 0.601595 | 8.3:-259499 | MS.gene042055:CDS |
| TGGGTTTCCAAATGAAACAT+GGG | 0.604798 | 8.3:-261702 | MS.gene042055:CDS |
| GATTACAAAGGCAGACGCGC+CGG | 0.610248 | 8.3:-262606 | MS.gene042055:CDS |
| GGTGCAACCTGTGGTGCTTG+TGG | 0.611921 | 8.3:-259423 | MS.gene042055:CDS |
| GTTGCAAGCTCAAAGACTGT+GGG | 0.616342 | 8.3:+259728 | None:intergenic |
| GGAAGTGAACTTGCCTGTTG+AGG | 0.623158 | 8.3:-261681 | MS.gene042055:CDS |
| AGGAACTGCTAAGCAATCAA+AGG | 0.625294 | 8.3:-259705 | MS.gene042055:CDS |
| ATGTGCGAGAAATGGTTCCA+TGG | 0.628526 | 8.3:-259360 | MS.gene042055:CDS |
| CAGTCTGAATCCCAGACCAA+GGG | 0.635249 | 8.3:-259519 | MS.gene042055:CDS |
| ACAACAGATCCAGAATTCAT+CGG | 0.639218 | 8.3:+259386 | None:intergenic |
| CCAGTCTGAATCCCAGACCA+AGG | 0.643258 | 8.3:-259520 | MS.gene042055:CDS |
| CAACTGACTGCTCACAACAA+TGG | 0.646947 | 8.3:-259680 | MS.gene042055:CDS |
| GCTGGCTCGGGAAGTTCAGG+AGG | 0.654216 | 8.3:+261653 | None:intergenic |
| GTCAAAGAAGAGGTTGACAG+TGG | 0.669063 | 8.3:-259477 | MS.gene042055:CDS |
| GAAGAAGATGATGATGAACA+AGG | 0.695245 | 8.3:-259444 | MS.gene042055:CDS |
| GATGAACAAGGTGCAACCTG+TGG | 0.715909 | 8.3:-259432 | MS.gene042055:CDS |
| CATTCTTACCAAATCCAAAG+CGG | 0.722080 | 8.3:+261522 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAGAAAAAAGAAAAAA+AGG | + | chr8.3:259584-259603 | None:intergenic | 10.0% |
| !! | CATAAAATAAAAATATGAAA+TGG | + | chr8.3:262318-262337 | None:intergenic | 10.0% |
| !!! | TTTAAACAATAACTTTTTAT+GGG | + | chr8.3:260142-260161 | None:intergenic | 10.0% |
| !! | TAAGCAAAAAAGTAAAAAAA+TGG | - | chr8.3:260957-260976 | MS.gene042055:intron | 15.0% |
| !!! | CTTTAAACAATAACTTTTTA+TGG | + | chr8.3:260143-260162 | None:intergenic | 15.0% |
| !!! | TATTTCTTTTGCAAAATAAT+TGG | - | chr8.3:261976-261995 | MS.gene042055:intron | 15.0% |
| !! | AGAATAATGATTAGTGTAAT+TGG | - | chr8.3:261355-261374 | MS.gene042055:intron | 20.0% |
| !! | ATAAAACCAATAATGCTATA+TGG | - | chr8.3:261419-261438 | MS.gene042055:intron | 20.0% |
| !! | TAAAACCAATAATGCTATAT+GGG | - | chr8.3:261420-261439 | MS.gene042055:intron | 20.0% |
| !! | TTTAGGGAAATTTAGTTATA+TGG | - | chr8.3:261707-261726 | MS.gene042055:CDS | 20.0% |
| !! | TTTATCACAAAACAACAAAA+AGG | - | chr8.3:260987-261006 | MS.gene042055:intron | 20.0% |
| !!! | TAATTTTAACACATTTACCA+TGG | + | chr8.3:262589-262608 | None:intergenic | 20.0% |
| !!! | TATAGCATTATTGGTTTTAT+AGG | + | chr8.3:261419-261438 | None:intergenic | 20.0% |
| !!! | TTAGGATTTTCATCTAATTT+TGG | - | chr8.3:262128-262147 | MS.gene042055:intron | 20.0% |
| ! | AAATGGTTATTTACAGGAAA+AGG | - | chr8.3:262154-262173 | MS.gene042055:intron | 25.0% |
| ! | AATAAGAGGACAAAACAAAA+TGG | + | chr8.3:259849-259868 | None:intergenic | 25.0% |
| ! | AATAGCAAATACAAATCAAG+TGG | - | chr8.3:262276-262295 | MS.gene042055:intron | 25.0% |
| ! | AGGGATAAAAGAAAAACTTT+AGG | - | chr8.3:261676-261695 | MS.gene042055:CDS | 25.0% |
| ! | AGTATATATCTCAAAGATGA+CGG | + | chr8.3:261853-261872 | None:intergenic | 25.0% |
| ! | GGTTGAAAATGAAAAAACAA+GGG | + | chr8.3:261013-261032 | None:intergenic | 25.0% |
| ! | TACAACACAAAAATCAACAT+GGG | - | chr8.3:260766-260785 | MS.gene042055:intron | 25.0% |
| ! | TCAAAAAGCCATATTTCTTA+AGG | - | chr8.3:262030-262049 | MS.gene042055:intron | 25.0% |
| ! | TGCACGTGATATTAATATTT+AGG | - | chr8.3:262110-262129 | MS.gene042055:intron | 25.0% |
| ! | TGGTTGAAAATGAAAAAACA+AGG | + | chr8.3:261014-261033 | None:intergenic | 25.0% |
| ! | TGTAGACAAACATGAAAAAT+TGG | - | chr8.3:260623-260642 | MS.gene042055:intron | 25.0% |
| ! | TTACAACACAAAAATCAACA+TGG | - | chr8.3:260765-260784 | MS.gene042055:intron | 25.0% |
| ! | TTTGCAAAATAATTGGCATA+GGG | - | chr8.3:261983-262002 | MS.gene042055:intron | 25.0% |
| !! | AATGAAGGTATATTGGTAAT+AGG | + | chr8.3:259890-259909 | None:intergenic | 25.0% |
| !! | AGCACTGAATTAAAAATAAG+AGG | + | chr8.3:259863-259882 | None:intergenic | 25.0% |
| !! | TTTATGGGTTTTTCCTATTT+GGG | + | chr8.3:260127-260146 | None:intergenic | 25.0% |
| !! | TTTTATGGGTTTTTCCTATT+TGG | + | chr8.3:260128-260147 | None:intergenic | 25.0% |
| !! | TTTTGCAAAATAATTGGCAT+AGG | - | chr8.3:261982-262001 | MS.gene042055:intron | 25.0% |
| !!! | AAAATTGTAGCATTTTAAGG+CGG | + | chr8.3:259776-259795 | None:intergenic | 25.0% |
| !!! | AAAGATGACGGATTAAAATT+GGG | + | chr8.3:261841-261860 | None:intergenic | 25.0% |
| !!! | ATTATCATCTCTAAAACACT+CGG | + | chr8.3:261484-261503 | None:intergenic | 25.0% |
| !!! | TCATCTAATTTTGGTTGAAA+TGG | - | chr8.3:262137-262156 | MS.gene042055:intron | 25.0% |
| AACTTTAGGTCAACTCATTT+AGG | - | chr8.3:261690-261709 | MS.gene042055:CDS | 30.0% | |
| AAGAAAAAAAGGAAAACCCT+AGG | + | chr8.3:259573-259592 | None:intergenic | 30.0% | |
| AATCCATAACTTTCTCAACA+AGG | + | chr8.3:260733-260752 | None:intergenic | 30.0% | |
| AATGCATATTGCTAGAAATC+TGG | - | chr8.3:262067-262086 | MS.gene042055:intron | 30.0% | |
| ACTTTAGGTCAACTCATTTA+GGG | - | chr8.3:261691-261710 | MS.gene042055:CDS | 30.0% | |
| ATCCATAACTTTCTCAACAA+GGG | + | chr8.3:260732-260751 | None:intergenic | 30.0% | |
| ATCGAATGTACAAAATGATG+GGG | - | chr8.3:261284-261303 | MS.gene042055:intron | 30.0% | |
| ATGAGTGGTTACATAAGATT+AGG | - | chr8.3:261513-261532 | MS.gene042055:intron | 30.0% | |
| ATGATAGTCCAATCAAGAAT+TGG | - | chr8.3:261941-261960 | MS.gene042055:intron | 30.0% | |
| ATGATTAGTGTAATTGGCAT+TGG | - | chr8.3:261361-261380 | MS.gene042055:intron | 30.0% | |
| ATGCTTAAAAAATGTGGCAT+GGG | + | chr8.3:259731-259750 | None:intergenic | 30.0% | |
| CAAATACAAATCAAGTGGAA+AGG | - | chr8.3:262281-262300 | MS.gene042055:intron | 30.0% | |
| CAGAAGTCAAAAACTATACA+TGG | + | chr8.3:261034-261053 | None:intergenic | 30.0% | |
| CCAACTTCAAAAGATAACAA+AGG | + | chr8.3:259964-259983 | None:intergenic | 30.0% | |
| CCATGTTATTCAAAACTATG+TGG | + | chr8.3:261264-261283 | None:intergenic | 30.0% | |
| CTTATTCTTTCTCATGACTA+TGG | - | chr8.3:260805-260824 | MS.gene042055:intron | 30.0% | |
| GAGTCATTGTCAATTGTATA+GGG | + | chr8.3:261906-261925 | None:intergenic | 30.0% | |
| GATAATGTTACAATGATGAG+TGG | - | chr8.3:261498-261517 | MS.gene042055:intron | 30.0% | |
| GATCGAATGTACAAAATGAT+GGG | - | chr8.3:261283-261302 | MS.gene042055:intron | 30.0% | |
| TGAGTCATTGTCAATTGTAT+AGG | + | chr8.3:261907-261926 | None:intergenic | 30.0% | |
| TGATAGTCCAATCAAGAATT+GGG | - | chr8.3:261942-261961 | MS.gene042055:intron | 30.0% | |
| TGGTTACATAAGATTAGGAA+AGG | - | chr8.3:261518-261537 | MS.gene042055:CDS | 30.0% | |
| TGGTTGAAATGGTTATTTAC+AGG | - | chr8.3:262148-262167 | MS.gene042055:intron | 30.0% | |
| TGTCAATTGTATAGGGAAAA+GGG | + | chr8.3:261899-261918 | None:intergenic | 30.0% | |
| TTACATAAGATTAGGAAAGG+TGG | - | chr8.3:261521-261540 | MS.gene042055:CDS | 30.0% | |
| TTGTCAATTGTATAGGGAAA+AGG | + | chr8.3:261900-261919 | None:intergenic | 30.0% | |
| TTTCTCTCTTCAATAGACTT+TGG | - | chr8.3:261188-261207 | MS.gene042055:intron | 30.0% | |
| ! | ATGATTTGCAAACATGGATT+AGG | + | chr8.3:260005-260024 | None:intergenic | 30.0% |
| ! | ATGTATACAAAGAGTGTGTA+TGG | + | chr8.3:259648-259667 | None:intergenic | 30.0% |
| ! | CAAAAGATGATTTGCAAACA+TGG | + | chr8.3:260011-260030 | None:intergenic | 30.0% |
| ! | GCCAAAATTGTAGCATTTTA+AGG | + | chr8.3:259779-259798 | None:intergenic | 30.0% |
| ! | GCCTTAAAATGCTACAATTT+TGG | - | chr8.3:259775-259794 | MS.gene042055:intron | 30.0% |
| ! | TAAGAGCATAGCAGAAAATA+AGG | + | chr8.3:259548-259567 | None:intergenic | 30.0% |
| ! | TTGGATTTGGTAAGAATGAT+AGG | - | chr8.3:260412-260431 | MS.gene042055:intron | 30.0% |
| !! | AAGATGACGGATTAAAATTG+GGG | + | chr8.3:261840-261859 | None:intergenic | 30.0% |
| !! | CAAAGATGACGGATTAAAAT+TGG | + | chr8.3:261842-261861 | None:intergenic | 30.0% |
| !! | GTTGTTTTGTGATAAAAACG+AGG | + | chr8.3:260983-261002 | None:intergenic | 30.0% |
| !!! | CCACATAGTTTTGAATAACA+TGG | - | chr8.3:261261-261280 | MS.gene042055:intron | 30.0% |
| !!! | CCTTTGTTATCTTTTGAAGT+TGG | - | chr8.3:259961-259980 | MS.gene042055:intron | 30.0% |
| !!! | GAAGTTTTTAGCGATTACAA+AGG | - | chr8.3:259311-259330 | MS.gene042055:CDS | 30.0% |
| AAAACTTCTTCAACAGTTCG+AGG | + | chr8.3:259299-259318 | None:intergenic | 35.0% | |
| AATGCTATATGGGACTACAT+AGG | - | chr8.3:261430-261449 | MS.gene042055:intron | 35.0% | |
| ACAACAGATCCAGAATTCAT+CGG | + | chr8.3:262546-262565 | None:intergenic | 35.0% | |
| ACTTTGGTACTATAGCATGT+TGG | - | chr8.3:261204-261223 | MS.gene042055:intron | 35.0% | |
| AGAGAAAGAGAAGAAGAAGA+AGG | + | chr8.3:259442-259461 | None:intergenic | 35.0% | |
| AGCCATTATAGGTCTATTGT+TGG | - | chr8.3:261782-261801 | MS.gene042055:intron | 35.0% | |
| AGTATCAAGAAGCCAAGAAT+TGG | - | chr8.3:262656-262675 | MS.gene042055:CDS | 35.0% | |
| AGTCTATTGAAGAGAGAAAC+AGG | + | chr8.3:261187-261206 | None:intergenic | 35.0% | |
| ATGCTATATGGGACTACATA+GGG | - | chr8.3:261431-261450 | MS.gene042055:intron | 35.0% | |
| ATGGGTTTCCAAATGAAACA+TGG | - | chr8.3:260226-260245 | MS.gene042055:intron | 35.0% | |
| ATTCTTACCAAATCCAAAGC+GGG | + | chr8.3:260409-260428 | None:intergenic | 35.0% | |
| ATTCTTTCTCATGACTATGG+AGG | - | chr8.3:260808-260827 | MS.gene042055:intron | 35.0% | |
| ATTGGGTATAAACTTTGCTC+GGG | - | chr8.3:260299-260318 | MS.gene042055:intron | 35.0% | |
| CAATATGCATTCTCTTGTTG+AGG | + | chr8.3:262058-262077 | None:intergenic | 35.0% | |
| CATGCTTAAAAAATGTGGCA+TGG | + | chr8.3:259732-259751 | None:intergenic | 35.0% | |
| CATTCTTACCAAATCCAAAG+CGG | + | chr8.3:260410-260429 | None:intergenic | 35.0% | |
| CATTGGGTATAAACTTTGCT+CGG | - | chr8.3:260298-260317 | MS.gene042055:intron | 35.0% | |
| CCACAATCAATAACAACCTA+TGG | - | chr8.3:259802-259821 | MS.gene042055:intron | 35.0% | |
| CTCATTGACAATTGCAGAAA+AGG | - | chr8.3:260188-260207 | MS.gene042055:intron | 35.0% | |
| CTTAGTAGCATGCTCATAAA+TGG | - | chr8.3:260668-260687 | MS.gene042055:intron | 35.0% | |
| CTTTGGTACTATAGCATGTT+GGG | - | chr8.3:261205-261224 | MS.gene042055:intron | 35.0% | |
| GATAGTCCAATCAAGAATTG+GGG | - | chr8.3:261943-261962 | MS.gene042055:intron | 35.0% | |
| GGATCGAATGTACAAAATGA+TGG | - | chr8.3:261282-261301 | MS.gene042055:intron | 35.0% | |
| GTAGTCCCATATAGCATTAT+TGG | + | chr8.3:261428-261447 | None:intergenic | 35.0% | |
| GTCTATTGAAGAGAGAAACA+GGG | + | chr8.3:261186-261205 | None:intergenic | 35.0% | |
| TCCATAACTTTCTCAACAAG+GGG | + | chr8.3:260731-260750 | None:intergenic | 35.0% | |
| TCTACACTCAAAACCACTTA+AGG | + | chr8.3:261557-261576 | None:intergenic | 35.0% | |
| TCTATTGAAGAGAGAAACAG+GGG | + | chr8.3:261185-261204 | None:intergenic | 35.0% | |
| TCTGTGCTTCACAAAATGTT+GGG | - | chr8.3:260832-260851 | MS.gene042055:intron | 35.0% | |
| TGAACTTCTTTGATGCATCT+AGG | - | chr8.3:260448-260467 | MS.gene042055:intron | 35.0% | |
| TGCCAACAATAGACCTATAA+TGG | + | chr8.3:261787-261806 | None:intergenic | 35.0% | |
| TGGGTTTCCAAATGAAACAT+GGG | - | chr8.3:260227-260246 | MS.gene042055:intron | 35.0% | |
| TGTTAAAATTACTCCTGCCA+AGG | - | chr8.3:262598-262617 | MS.gene042055:CDS | 35.0% | |
| TTCACTTCCCATGTTTCATT+TGG | + | chr8.3:260237-260256 | None:intergenic | 35.0% | |
| TTCTGTGCTTCACAAAATGT+TGG | - | chr8.3:260831-260850 | MS.gene042055:intron | 35.0% | |
| TTGAGGCTCCTTAAGAAATA+TGG | + | chr8.3:262041-262060 | None:intergenic | 35.0% | |
| TTTAATTGGATACGGTGAGA+AGG | + | chr8.3:259914-259933 | None:intergenic | 35.0% | |
| TTTCATTTGGAAACCCATAG+AGG | + | chr8.3:260224-260243 | None:intergenic | 35.0% | |
| ! | AGAAGGCAATGAAGGTATAT+TGG | + | chr8.3:259897-259916 | None:intergenic | 35.0% |
| ! | AGGTTGTTATTGATTGTGGA+TGG | + | chr8.3:259801-259820 | None:intergenic | 35.0% |
| ! | ATTTTGTCACACAGAGTACA+GGG | + | chr8.3:261152-261171 | None:intergenic | 35.0% |
| ! | CCATAGGTTGTTATTGATTG+TGG | + | chr8.3:259805-259824 | None:intergenic | 35.0% |
| ! | GAAGAAGATGATGATGAACA+AGG | - | chr8.3:262485-262504 | MS.gene042055:intron | 35.0% |
| !! | TTAAAAGGAAGCATCCAAAC+AGG | + | chr8.3:262381-262400 | None:intergenic | 35.0% |
| AAGGAGAATTTGTGCCTCTA+TGG | - | chr8.3:260207-260226 | MS.gene042055:intron | 40.0% | |
| AATCTGCTTCTTGCAAATGC+AGG | + | chr8.3:261817-261836 | None:intergenic | 40.0% | |
| ACATCTCCCCAATTCTTGAT+TGG | + | chr8.3:261952-261971 | None:intergenic | 40.0% | |
| ACGAGTGAATTCCATATGCA+TGG | + | chr8.3:262353-262372 | None:intergenic | 40.0% | |
| AGAGAAATTGCGGAGAAGAT+GGG | - | chr8.3:260920-260939 | MS.gene042055:intron | 40.0% | |
| AGGAACTGCTAAGCAATCAA+AGG | - | chr8.3:262224-262243 | MS.gene042055:intron | 40.0% | |
| AGGAGAATTTGTGCCTCTAT+GGG | - | chr8.3:260208-260227 | MS.gene042055:intron | 40.0% | |
| AGTTGCAGTTGATCATCCAT+AGG | + | chr8.3:259821-259840 | None:intergenic | 40.0% | |
| ATAGGGAAAAGGGATCCAAT+GGG | + | chr8.3:261889-261908 | None:intergenic | 40.0% | |
| ATCACAGGATCTTTGTAGGA+TGG | - | chr8.3:261325-261344 | MS.gene042055:intron | 40.0% | |
| ATTCTGATGCTCAAGGTAGA+GGG | - | chr8.3:261657-261676 | MS.gene042055:CDS | 40.0% | |
| ATTCTTGCCTCAAGTGCTTT+GGG | - | chr8.3:261588-261607 | MS.gene042055:CDS | 40.0% | |
| CAAAACTATGTGGCCAATGA+TGG | + | chr8.3:261254-261273 | None:intergenic | 40.0% | |
| CAAAATAATTGGCATAGGGC+AGG | - | chr8.3:261987-262006 | MS.gene042055:intron | 40.0% | |
| CAAAGAGAAAAACGACAGAC+CGG | + | chr8.3:259941-259960 | None:intergenic | 40.0% | |
| CCATAACTTTCTCAACAAGG+GGG | + | chr8.3:260730-260749 | None:intergenic | 40.0% | |
| CCGGTGAGTTTAATTGGATA+CGG | + | chr8.3:259922-259941 | None:intergenic | 40.0% | |
| CCGTATCCAATTAAACTCAC+CGG | - | chr8.3:259919-259938 | MS.gene042055:intron | 40.0% | |
| CTGTGCTTCACAAAATGTTG+GGG | - | chr8.3:260833-260852 | MS.gene042055:intron | 40.0% | |
| CTTCTTGCAAATGCAGGATA+AGG | + | chr8.3:261811-261830 | None:intergenic | 40.0% | |
| GAGGAATGGTAGAGAAATTG+CGG | - | chr8.3:260910-260929 | MS.gene042055:intron | 40.0% | |
| GCAAAGTTTATACCCAATGC+TGG | + | chr8.3:260297-260316 | None:intergenic | 40.0% | |
| GCCAGCATGCTTAAAAAATG+TGG | + | chr8.3:259737-259756 | None:intergenic | 40.0% | |
| GGTGCTTGTGGTGATAATTA+TGG | - | chr8.3:262518-262537 | MS.gene042055:intron | 40.0% | |
| GTCAATCACAGGATCTTTGT+AGG | - | chr8.3:261321-261340 | MS.gene042055:intron | 40.0% | |
| GTGAAGAACAGAGAACTAAC+CGG | + | chr8.3:259500-259519 | None:intergenic | 40.0% | |
| GTTGTGATATGTGCGAGAAA+TGG | - | chr8.3:262561-262580 | MS.gene042055:intron | 40.0% | |
| TAGAGAAATTGCGGAGAAGA+TGG | - | chr8.3:260919-260938 | MS.gene042055:intron | 40.0% | |
| TAGCTAAAATCACGGAGGAA+TGG | - | chr8.3:260896-260915 | MS.gene042055:intron | 40.0% | |
| TATAGGGAAAAGGGATCCAA+TGG | + | chr8.3:261890-261909 | None:intergenic | 40.0% | |
| TATGCTACGCTAACCATCAT+TGG | - | chr8.3:261238-261257 | MS.gene042055:intron | 40.0% | |
| TGAAGAACAGAGAACTAACC+GGG | + | chr8.3:259499-259518 | None:intergenic | 40.0% | |
| TGATGGTTAGCGTAGCATAA+TGG | + | chr8.3:261237-261256 | None:intergenic | 40.0% | |
| TGCTATATGGGACTACATAG+GGG | - | chr8.3:261432-261451 | MS.gene042055:intron | 40.0% | |
| TTCTATCACTGCCATGCATA+TGG | - | chr8.3:262339-262358 | MS.gene042055:intron | 40.0% | |
| TTGATCAAAGCTCTCACTAC+TGG | - | chr8.3:259347-259366 | MS.gene042055:CDS | 40.0% | |
| ! | AGTGAGAGCTTTGATCAAAC+CGG | + | chr8.3:259345-259364 | None:intergenic | 40.0% |
| ! | ATTAAAAGCGCAGAGACAGA+CGG | + | chr8.3:259522-259541 | None:intergenic | 40.0% |
| ! | GATTTTGTCACACAGAGTAC+AGG | + | chr8.3:261153-261172 | None:intergenic | 40.0% |
| ! | TTCACTCGTGTTTTCCTGTT+TGG | - | chr8.3:262364-262383 | MS.gene042055:intron | 40.0% |
| ! | TTCCTATTTGGGATAGGCTA+CGG | + | chr8.3:260116-260135 | None:intergenic | 40.0% |
| ! | TTTTGTCACACAGAGTACAG+GGG | + | chr8.3:261151-261170 | None:intergenic | 40.0% |
| !! | ATTATGGCACCGATGAATTC+TGG | - | chr8.3:262534-262553 | MS.gene042055:intron | 40.0% |
| !! | GGGTTTTTCCTATTTGGGAT+AGG | + | chr8.3:260122-260141 | None:intergenic | 40.0% |
| !!! | CTCGCTGTTGCTTTCTATTT+TGG | - | chr8.3:260381-260400 | MS.gene042055:intron | 40.0% |
| !!! | GCCACATTTTTTAAGCATGC+TGG | - | chr8.3:259733-259752 | MS.gene042055:CDS | 40.0% |
| AATCAGACCATCCTCCGATT+GGG | + | chr8.3:261640-261659 | None:intergenic | 45.0% | |
| ACAGTCTTTGAGCTTGCAAC+AGG | - | chr8.3:262204-262223 | MS.gene042055:intron | 45.0% | |
| ATACGGTGAGAAGGCAATGA+AGG | + | chr8.3:259905-259924 | None:intergenic | 45.0% | |
| ATCAACATGGGACGTGACTA+TGG | - | chr8.3:260778-260797 | MS.gene042055:intron | 45.0% | |
| ATCAAGCAATACAAGTGCCC+TGG | - | chr8.3:262629-262648 | MS.gene042055:CDS | 45.0% | |
| ATGTGCGAGAAATGGTTCCA+TGG | - | chr8.3:262569-262588 | MS.gene042055:intron | 45.0% | |
| ATTATCACCACAAGCACCAC+AGG | + | chr8.3:262516-262535 | None:intergenic | 45.0% | |
| CAAAGATCCTGTGATTGACG+TGG | + | chr8.3:261320-261339 | None:intergenic | 45.0% | |
| CAACTGACTGCTCACAACAA+TGG | - | chr8.3:262249-262268 | MS.gene042055:intron | 45.0% | |
| CATTGTTGTGAGCAGTCAGT+TGG | + | chr8.3:262251-262270 | None:intergenic | 45.0% | |
| CCCCCTTGTTGAGAAAGTTA+TGG | - | chr8.3:260727-260746 | MS.gene042055:intron | 45.0% | |
| CTGCTATGCTCTTACTCCTA+GGG | - | chr8.3:259554-259573 | MS.gene042055:intron | 45.0% | |
| CTGTCAACCTCTTCTTTGAC+CGG | + | chr8.3:262452-262471 | None:intergenic | 45.0% | |
| GACAGACCGGTGAGTTTAAT+TGG | + | chr8.3:259928-259947 | None:intergenic | 45.0% | |
| GAGAAATTGCGGAGAAGATG+GGG | - | chr8.3:260921-260940 | MS.gene042055:intron | 45.0% | |
| GATTCTGATGCTCAAGGTAG+AGG | - | chr8.3:261656-261675 | MS.gene042055:CDS | 45.0% | |
| GATTCTTGCCTCAAGTGCTT+TGG | - | chr8.3:261587-261606 | MS.gene042055:CDS | 45.0% | |
| GGTATAAACTTTGCTCGGGA+TGG | - | chr8.3:260303-260322 | MS.gene042055:intron | 45.0% | |
| GTCAAAGAAGAGGTTGACAG+TGG | - | chr8.3:262452-262471 | MS.gene042055:CDS | 45.0% | |
| GTTGCAAGCTCAAAGACTGT+GGG | + | chr8.3:262204-262223 | None:intergenic | 45.0% | |
| TAGATGACCACGTCAATCAC+AGG | - | chr8.3:261310-261329 | MS.gene042055:intron | 45.0% | |
| TCAACATGGGACGTGACTAT+GGG | - | chr8.3:260779-260798 | MS.gene042055:intron | 45.0% | |
| TCTGCTATGCTCTTACTCCT+AGG | - | chr8.3:259553-259572 | MS.gene042055:intron | 45.0% | |
| TCTTCAACAGTTCGAGGTAC+TGG | + | chr8.3:259293-259312 | None:intergenic | 45.0% | |
| TGCTTCACAAAATGTTGGGG+TGG | - | chr8.3:260836-260855 | MS.gene042055:intron | 45.0% | |
| TGGTCTGATTCTGATGCTCA+AGG | - | chr8.3:261650-261669 | MS.gene042055:CDS | 45.0% | |
| TGGTTGAGTCTTGCCTTAAG+TGG | - | chr8.3:261541-261560 | MS.gene042055:CDS | 45.0% | |
| TGTGACCTTTGTTGGACATG+CGG | - | chr8.3:261087-261106 | MS.gene042055:intron | 45.0% | |
| TGTTGCAAGCTCAAAGACTG+TGG | + | chr8.3:262205-262224 | None:intergenic | 45.0% | |
| TTCTTGCCTCAAGTGCTTTG+GGG | - | chr8.3:261589-261608 | MS.gene042055:CDS | 45.0% | |
| TTGCAGTTCACAGTGACTCA+TGG | - | chr8.3:260355-260374 | MS.gene042055:intron | 45.0% | |
| TTGCTTGATGTGTTCAGCCT+TGG | + | chr8.3:262618-262637 | None:intergenic | 45.0% | |
| ! | ACAACTTTTCTGCTGCAGTG+CGG | - | chr8.3:259675-259694 | MS.gene042055:CDS | 45.0% |
| ! | AGAACCAAGGTATCCCCAAT+CGG | - | chr8.3:261623-261642 | MS.gene042055:CDS | 45.0% |
| ! | CTTCAACAGTTCGAGGTACT+GGG | + | chr8.3:259292-259311 | None:intergenic | 45.0% |
| ! | GTTTATACCCAATGCTGGCT+CGG | + | chr8.3:260292-260311 | None:intergenic | 45.0% |
| !! | TTTATACCCAATGCTGGCTC+GGG | + | chr8.3:260291-260310 | None:intergenic | 45.0% |
| !!! | TTCTATTTTGGTGCCCGCTT+TGG | - | chr8.3:260393-260412 | MS.gene042055:intron | 45.0% |
| !! | TTATATTATAAATATTTGAA+TGG | - | chr8.3:260055-260074 | MS.gene042055:intron | 5.0% |
| AAAAGGGATCCAATGGGAGG+GGG | + | chr8.3:261883-261902 | None:intergenic | 50.0% | |
| ACAAAGCTCCTGTCATGGCA+GGG | - | chr8.3:261743-261762 | MS.gene042055:intron | 50.0% | |
| ACATCTTCACACCCTTGGTC+TGG | + | chr8.3:262424-262443 | None:intergenic | 50.0% | |
| AGACTGGCGGGACTGTTAAA+AGG | + | chr8.3:262396-262415 | None:intergenic | 50.0% | |
| AGAGAGAAACAGGGGAGAAG+AGG | + | chr8.3:261177-261196 | None:intergenic | 50.0% | |
| ATCAGACCATCCTCCGATTG+GGG | + | chr8.3:261639-261658 | None:intergenic | 50.0% | |
| ATGGAATGCAGGAGAAGGAC+TGG | - | chr8.3:260322-260341 | MS.gene042055:intron | 50.0% | |
| CACAAAATGTTGGGGTGGAG+TGG | - | chr8.3:260841-260860 | MS.gene042055:intron | 50.0% | |
| CACCTCTCTGTGACCTTTGT+TGG | - | chr8.3:261079-261098 | MS.gene042055:intron | 50.0% | |
| CACTCGGCTCACTTTCTTGA+TGG | + | chr8.3:261468-261487 | None:intergenic | 50.0% | |
| CAGTCTGAATCCCAGACCAA+GGG | - | chr8.3:262410-262429 | MS.gene042055:intron | 50.0% | |
| CATCTTCACACCCTTGGTCT+GGG | + | chr8.3:262423-262442 | None:intergenic | 50.0% | |
| CTCCGTAGCCTATCCCAAAT+AGG | - | chr8.3:260111-260130 | MS.gene042055:intron | 50.0% | |
| GAAAAGGGATCCAATGGGAG+GGG | + | chr8.3:261884-261903 | None:intergenic | 50.0% | |
| GAATCAGACCATCCTCCGAT+TGG | + | chr8.3:261641-261660 | None:intergenic | 50.0% | |
| GATGAACAAGGTGCAACCTG+TGG | - | chr8.3:262497-262516 | MS.gene042055:intron | 50.0% | |
| GCTTCTTGATACTGCAGCCA+GGG | + | chr8.3:262649-262668 | None:intergenic | 50.0% | |
| GGAAAAGGGATCCAATGGGA+GGG | + | chr8.3:261885-261904 | None:intergenic | 50.0% | |
| GGAAGGGTTGGAGCCATTAT+AGG | - | chr8.3:261771-261790 | MS.gene042055:intron | 50.0% | |
| GGAAGTGAACTTGCCTGTTG+AGG | - | chr8.3:260248-260267 | MS.gene042055:intron | 50.0% | |
| GGTTGACAGTGGAGAAGAAG+AGG | - | chr8.3:262463-262482 | MS.gene042055:CDS | 50.0% | |
| GTCCAACAAAGGTCACAGAG+AGG | + | chr8.3:261084-261103 | None:intergenic | 50.0% | |
| GTGCTACAAAGCTCCTGTCA+TGG | - | chr8.3:261738-261757 | MS.gene042055:intron | 50.0% | |
| TACAAAGCTCCTGTCATGGC+AGG | - | chr8.3:261742-261761 | MS.gene042055:intron | 50.0% | |
| TGCAGACATCTTCACACCCT+TGG | + | chr8.3:262429-262448 | None:intergenic | 50.0% | |
| TGCGGGGGTAGCTAAAATCA+CGG | - | chr8.3:260888-260907 | MS.gene042055:intron | 50.0% | |
| TTGATGTGTTCAGCCTTGGC+AGG | + | chr8.3:262614-262633 | None:intergenic | 50.0% | |
| ! | AACTTTTCTGCTGCAGTGCG+GGG | - | chr8.3:259677-259696 | MS.gene042055:CDS | 50.0% |
| ! | CAACTTTTCTGCTGCAGTGC+GGG | - | chr8.3:259676-259695 | MS.gene042055:CDS | 50.0% |
| ! | CTATTTGGGATAGGCTACGG+AGG | + | chr8.3:260113-260132 | None:intergenic | 50.0% |
| ! | GACAGGAGCTTTGTAGCACA+AGG | + | chr8.3:261737-261756 | None:intergenic | 50.0% |
| ! | TTTTACCAGCTCTGCGATCC+CGG | - | chr8.3:259478-259497 | MS.gene042055:CDS | 50.0% |
| !! | CTCAAGTGCTTTGGGGATGT+GGG | - | chr8.3:261596-261615 | MS.gene042055:CDS | 50.0% |
| !! | GGAGAAGGACTGGTTATCAC+TGG | - | chr8.3:260332-260351 | MS.gene042055:intron | 50.0% |
| !! | TCAAGTGCTTTGGGGATGTG+GGG | - | chr8.3:261597-261616 | MS.gene042055:CDS | 50.0% |
| !! | TTTGGTGCCCGCTTTGGATT+TGG | - | chr8.3:260399-260418 | MS.gene042055:intron | 50.0% |
| AAGGCGGCAGAAAACAGCAC+AGG | + | chr8.3:259760-259779 | None:intergenic | 55.0% | |
| AGGCGGCAGAAAACAGCACA+GGG | + | chr8.3:259759-259778 | None:intergenic | 55.0% | |
| AGGTATCCCCAATCGGAGGA+TGG | - | chr8.3:261630-261649 | MS.gene042055:CDS | 55.0% | |
| CACAGAGTACAGGGGAGAGA+AGG | + | chr8.3:261143-261162 | None:intergenic | 55.0% | |
| CCAGTCTGAATCCCAGACCA+AGG | - | chr8.3:262409-262428 | MS.gene042055:intron | 55.0% | |
| CTTTGCTCGGGATGGAATGC+AGG | - | chr8.3:260311-260330 | MS.gene042055:intron | 55.0% | |
| CTTTGTTGGACATGCGGCTC+CGG | - | chr8.3:261093-261112 | MS.gene042055:intron | 55.0% | |
| GAACTTCCCGAGCCAGCATT+GGG | - | chr8.3:260282-260301 | MS.gene042055:intron | 55.0% | |
| GAGATCGTGGAAGCGAAGAG+CGG | + | chr8.3:261060-261079 | None:intergenic | 55.0% | |
| GATTACAAAGGCAGACGCGC+CGG | - | chr8.3:259323-259342 | MS.gene042055:CDS | 55.0% | |
| GGATGTGGGGAGAAGAACCA+AGG | - | chr8.3:261610-261629 | MS.gene042055:CDS | 55.0% | |
| GGCTTCTTGATACTGCAGCC+AGG | + | chr8.3:262650-262669 | None:intergenic | 55.0% | |
| GGGAAAAGGGATCCAATGGG+AGG | + | chr8.3:261886-261905 | None:intergenic | 55.0% | |
| GGGGGTAGCTAAAATCACGG+AGG | - | chr8.3:260891-260910 | MS.gene042055:intron | 55.0% | |
| GGGTGTGAAGATGTCTGCAC+CGG | - | chr8.3:262430-262449 | MS.gene042055:intron | 55.0% | |
| GTCACAGAGAGGTGAGATCG+TGG | + | chr8.3:261073-261092 | None:intergenic | 55.0% | |
| TAATGGCTCCAACCCTTCCC+TGG | + | chr8.3:261770-261789 | None:intergenic | 55.0% | |
| TCCTCCGATTGGGGATACCT+TGG | + | chr8.3:261630-261649 | None:intergenic | 55.0% | |
| TCGGGATGGAATGCAGGAGA+AGG | - | chr8.3:260317-260336 | MS.gene042055:intron | 55.0% | |
| TGAACTTCCCGAGCCAGCAT+TGG | - | chr8.3:260281-260300 | MS.gene042055:intron | 55.0% | |
| ! | ACCAAGGTATCCCCAATCGG+AGG | - | chr8.3:261626-261645 | MS.gene042055:CDS | 55.0% |
| ! | CCACATCCCCAAAGCACTTG+AGG | + | chr8.3:261598-261617 | None:intergenic | 55.0% |
| ! | CCTTGGTCTGGGATTCAGAC+TGG | + | chr8.3:262412-262431 | None:intergenic | 55.0% |
| ! | GTCTGCACCGGTCAAAGAAG+AGG | - | chr8.3:262442-262461 | MS.gene042055:intron | 55.0% |
| ! | TGGTCTGGGATTCAGACTGG+CGG | + | chr8.3:262409-262428 | None:intergenic | 55.0% |
| !! | AATGCTGGCTCGGGAAGTTC+AGG | + | chr8.3:260282-260301 | None:intergenic | 55.0% |
| !! | CCTCAAGTGCTTTGGGGATG+TGG | - | chr8.3:261595-261614 | MS.gene042055:CDS | 55.0% |
| !! | TCAGGAGGCACTTCCTCAAC+AGG | + | chr8.3:260264-260283 | None:intergenic | 55.0% |
| ACTAACCGGGATCGCAGAGC+TGG | + | chr8.3:259486-259505 | None:intergenic | 60.0% | |
| CGGAGCCGCATGTCCAACAA+AGG | + | chr8.3:261095-261114 | None:intergenic | 60.0% | |
| CTGCAGTGCGGGGTGAATTG+GGG | - | chr8.3:259687-259706 | MS.gene042055:CDS | 60.0% | |
| CTTGAGTCACCCCCTCCCAT+TGG | - | chr8.3:261871-261890 | MS.gene042055:intron | 60.0% | |
| GCTGCAGTGCGGGGTGAATT+GGG | - | chr8.3:259686-259705 | MS.gene042055:CDS | 60.0% | |
| GGTGCAACCTGTGGTGCTTG+TGG | - | chr8.3:262506-262525 | MS.gene042055:intron | 60.0% | |
| GGTGGAGTGGATCTGCGTTG+CGG | - | chr8.3:260854-260873 | MS.gene042055:intron | 60.0% | |
| GTTGCGGCCATAGTGCTGTG+CGG | - | chr8.3:260870-260889 | MS.gene042055:intron | 60.0% | |
| TACAGGGGAGAGAAGGTCGC+CGG | + | chr8.3:261136-261155 | None:intergenic | 60.0% | |
| TCATGGCAGGGTCCAGGGAA+GGG | - | chr8.3:261755-261774 | MS.gene042055:intron | 60.0% | |
| TCCTGTCATGGCAGGGTCCA+GGG | - | chr8.3:261750-261769 | MS.gene042055:intron | 60.0% | |
| TGCTGCAGTGCGGGGTGAAT+TGG | - | chr8.3:259685-259704 | MS.gene042055:CDS | 60.0% | |
| TTGCGGCCATAGTGCTGTGC+GGG | - | chr8.3:260871-260890 | MS.gene042055:intron | 60.0% | |
| ! | GGTCTGGGATTCAGACTGGC+GGG | + | chr8.3:262408-262427 | None:intergenic | 60.0% |
| CTCCTGTCATGGCAGGGTCC+AGG | - | chr8.3:261749-261768 | MS.gene042055:intron | 65.0% | |
| GCTACCCCCGCACAGCACTA+TGG | + | chr8.3:260880-260899 | None:intergenic | 65.0% | |
| GTCATGGCAGGGTCCAGGGA+AGG | - | chr8.3:261754-261773 | MS.gene042055:intron | 65.0% | |
| TCCCTGGACCCTGCCATGAC+AGG | + | chr8.3:261754-261773 | None:intergenic | 65.0% | |
| TGCGGCCATAGTGCTGTGCG+GGG | - | chr8.3:260872-260891 | MS.gene042055:intron | 65.0% | |
| !! | GCTGGCTCGGGAAGTTCAGG+AGG | + | chr8.3:260279-260298 | None:intergenic | 65.0% |
| GCGGCCATAGTGCTGTGCGG+GGG | - | chr8.3:260873-260892 | MS.gene042055:intron | 70.0% | |
| GGCAGGGTCCAGGGAAGGGT+TGG | - | chr8.3:261759-261778 | MS.gene042055:intron | 70.0% | |
| TTGGACATGCGGCTCCGGCG+CGG | - | chr8.3:261098-261117 | MS.gene042055:intron | 70.0% | |
| GGAGTCAGCACCAGCCGCGC+CGG | + | chr8.3:261115-261134 | None:intergenic | 75.0% | |
| !! | GGCGCGGCTGGTGCTGACTC+CGG | - | chr8.3:261114-261133 | MS.gene042055:intron | 75.0% |
| ! | ACATGCGGCTCCGGCGCGGC+TGG | - | chr8.3:261102-261121 | MS.gene042055:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 259269 | 262682 | 259269 | ID=MS.gene042055 |
| chr8.3 | mRNA | 259269 | 262682 | 259269 | ID=MS.gene042055.t1;Parent=MS.gene042055 |
| chr8.3 | exon | 262583 | 262682 | 262583 | ID=MS.gene042055.t1.exon1;Parent=MS.gene042055.t1 |
| chr8.3 | CDS | 262583 | 262682 | 262583 | ID=cds.MS.gene042055.t1;Parent=MS.gene042055.t1 |
| chr8.3 | exon | 262452 | 262484 | 262452 | ID=MS.gene042055.t1.exon2;Parent=MS.gene042055.t1 |
| chr8.3 | CDS | 262452 | 262484 | 262452 | ID=cds.MS.gene042055.t1;Parent=MS.gene042055.t1 |
| chr8.3 | exon | 261518 | 261746 | 261518 | ID=MS.gene042055.t1.exon3;Parent=MS.gene042055.t1 |
| chr8.3 | CDS | 261518 | 261746 | 261518 | ID=cds.MS.gene042055.t1;Parent=MS.gene042055.t1 |
| chr8.3 | exon | 259649 | 259781 | 259649 | ID=MS.gene042055.t1.exon4;Parent=MS.gene042055.t1 |
| chr8.3 | CDS | 259649 | 259781 | 259649 | ID=cds.MS.gene042055.t1;Parent=MS.gene042055.t1 |
| chr8.3 | exon | 259269 | 259547 | 259269 | ID=MS.gene042055.t1.exon5;Parent=MS.gene042055.t1 |
| chr8.3 | CDS | 259269 | 259547 | 259269 | ID=cds.MS.gene042055.t1;Parent=MS.gene042055.t1 |
| Gene Sequence |
| Protein sequence |
