AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene042058

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene042058.t1 MTR_4g134460 87.613 444 12 7 1 411 1 434 0.0 715
MS.gene042058.t1 MTR_5g040420 41.063 207 78 6 47 213 1 203 5.74e-42 152
MS.gene042058.t1 MTR_4g075980 47.333 150 49 3 59 179 14 162 7.57e-42 149
MS.gene042058.t1 MTR_6g011860 52.593 135 37 1 53 160 8 142 7.58e-42 152
MS.gene042058.t1 MTR_8g467490 46.341 164 47 5 57 179 11 174 2.10e-41 151
MS.gene042058.t1 MTR_5g090970 36.765 272 109 8 49 262 7 273 4.14e-40 145
MS.gene042058.t1 MTR_5g090970 36.996 273 108 9 49 262 7 274 3.28e-39 143
MS.gene042058.t1 MTR_2g080010 43.713 167 51 4 62 185 17 183 1.23e-37 140
MS.gene042058.t1 MTR_2157s0010 45.963 161 45 4 62 180 10 170 1.44e-37 137
MS.gene042058.t1 MTR_6g477900 47.059 153 47 4 62 181 8 159 1.48e-37 136
MS.gene042058.t1 MTR_7g085220 39.604 202 66 6 62 218 10 200 3.03e-37 138
MS.gene042058.t1 MTR_8g059170 48.667 150 43 5 62 178 16 164 3.07e-37 138
MS.gene042058.t1 MTR_3g088110 47.500 160 47 5 62 186 9 166 3.42e-37 137
MS.gene042058.t1 MTR_8g094580 46.104 154 46 3 62 180 9 160 3.49e-37 137
MS.gene042058.t1 MTR_5g041940 44.311 167 50 5 62 186 5 170 4.60e-37 135
MS.gene042058.t1 MTR_2g079990 46.452 155 51 4 62 185 18 171 7.59e-37 137
MS.gene042058.t1 MTR_4g089135 40.761 184 54 4 57 185 12 195 3.04e-36 135
MS.gene042058.t1 MTR_3g096920 47.059 153 45 4 62 180 9 159 7.24e-36 133
MS.gene042058.t1 MTR_4g081870 46.053 152 46 5 62 178 11 161 1.49e-35 132
MS.gene042058.t1 MTR_2g093810 42.077 183 62 6 62 201 16 197 2.71e-35 132
MS.gene042058.t1 MTR_2g068880 43.407 182 45 6 46 178 14 186 6.61e-35 131
MS.gene042058.t1 MTR_2g079990 53.600 125 30 3 62 159 18 141 7.64e-35 133
MS.gene042058.t1 MTR_2g064090 43.421 152 51 3 62 179 8 158 1.04e-34 132
MS.gene042058.t1 MTR_7g100990 43.452 168 55 5 51 180 2 167 1.20e-34 131
MS.gene042058.t1 MTR_5g076850 46.405 153 48 4 62 181 8 159 2.43e-34 135
MS.gene042058.t1 MTR_3g064580 44.805 154 50 4 62 181 8 160 3.19e-34 135
MS.gene042058.t1 MTR_2g068920 43.407 182 44 6 46 178 14 185 4.02e-34 129
MS.gene042058.t1 MTR_6g012670 43.791 153 52 4 62 181 22 173 1.49e-33 128
MS.gene042058.t1 MTR_3g096920 52.800 125 30 3 62 159 9 131 2.86e-33 127
MS.gene042058.t1 MTR_8g094580 53.704 108 40 2 81 180 1 106 6.45e-33 124
MS.gene042058.t1 MTR_2g062730 42.105 152 56 3 59 178 9 160 2.05e-32 125
MS.gene042058.t1 MTR_6g084430 42.949 156 53 5 62 185 7 158 4.17e-32 124
MS.gene042058.t1 MTR_3g116070 38.220 191 74 6 62 213 25 210 7.62e-32 124
MS.gene042058.t1 MTR_2g078700 49.206 126 36 3 62 159 25 150 9.06e-32 124
MS.gene042058.t1 MTR_3g109340 41.935 155 60 4 56 180 18 172 1.05e-31 124
MS.gene042058.t1 MTR_4g108760 40.331 181 63 8 44 186 4 177 1.26e-31 124
MS.gene042058.t1 MTR_3g109340 41.667 156 60 4 56 180 18 173 1.45e-31 123
MS.gene042058.t1 MTR_5g069030 45.638 149 47 4 63 178 28 175 1.72e-31 127
MS.gene042058.t1 MTR_2g064470 39.062 192 76 5 62 213 13 203 2.00e-31 122
MS.gene042058.t1 MTR_1g097300 41.176 153 56 3 61 180 20 171 3.26e-31 125
MS.gene042058.t1 MTR_4g101680 41.722 151 55 4 60 178 7 156 4.65e-31 122
MS.gene042058.t1 MTR_3g435150 41.935 155 54 5 59 179 15 167 5.26e-31 120
MS.gene042058.t1 MTR_5g012080 40.789 152 57 3 60 178 7 158 5.51e-31 121
MS.gene042058.t1 MTR_4g036030 41.722 151 55 4 60 178 7 156 1.39e-30 120
MS.gene042058.t1 MTR_1g069805 36.816 201 83 5 62 218 12 212 1.68e-30 118
MS.gene042058.t1 MTR_1g008740 38.462 169 71 5 51 186 4 172 1.87e-30 120
MS.gene042058.t1 MTR_1g008740 39.634 164 66 5 56 186 23 186 2.13e-30 120
MS.gene042058.t1 MTR_3g093050 43.624 149 50 4 63 178 25 172 2.42e-30 123
MS.gene042058.t1 MTR_3g093050 43.624 149 50 4 63 178 25 172 2.98e-30 123
MS.gene042058.t1 MTR_4g035590 39.216 153 61 3 60 181 8 159 3.27e-30 119
MS.gene042058.t1 MTR_5g014300 43.871 155 47 6 62 178 8 160 3.45e-30 119
MS.gene042058.t1 MTR_7g105170 37.576 165 59 3 58 179 2 165 2.14e-29 115
MS.gene042058.t1 MTR_8g024480 38.889 162 55 4 60 178 15 175 2.63e-29 118
MS.gene042058.t1 MTR_1g096430 40.132 152 58 3 59 178 6 156 3.56e-29 116
MS.gene042058.t1 MTR_4g052620 36.181 199 81 6 57 209 2 200 4.97e-29 114
MS.gene042058.t1 MTR_7g097090 41.958 143 55 2 62 176 12 154 8.69e-29 114
MS.gene042058.t1 MTR_5g021710 39.490 157 62 4 54 178 2 157 1.31e-28 115
MS.gene042058.t1 MTR_3g096140 37.975 158 64 4 56 180 3 159 1.32e-28 113
MS.gene042058.t1 MTR_6g032770 45.600 125 40 3 63 159 21 145 1.66e-28 115
MS.gene042058.t1 MTR_7g005280 41.667 168 67 6 62 200 17 182 2.83e-28 112
MS.gene042058.t1 MTR_1g090720 40.994 161 55 4 60 181 42 201 2.89e-28 116
MS.gene042058.t1 MTR_2g086690 36.508 189 77 5 62 210 6 191 3.70e-28 111
MS.gene042058.t1 MTR_3g096140 37.975 158 64 4 56 180 3 159 3.93e-28 114
MS.gene042058.t1 MTR_3g093040 35.025 197 90 6 16 178 66 258 4.26e-28 113
MS.gene042058.t1 MTR_8g063550 35.714 154 65 4 60 180 6 158 6.22e-28 113
MS.gene042058.t1 MTR_3g070030 35.319 235 82 9 63 242 22 241 6.34e-28 113
MS.gene042058.t1 MTR_7g085260 44.615 130 38 3 62 159 19 146 7.31e-28 114
MS.gene042058.t1 MTR_8g063550 35.714 154 65 4 60 180 6 158 7.54e-28 114
MS.gene042058.t1 MTR_8g063550 35.714 154 65 4 60 180 6 158 9.97e-28 114
MS.gene042058.t1 MTR_1g090723 39.216 153 58 5 62 180 10 161 1.75e-27 115
MS.gene042058.t1 MTR_4g098630 44.079 152 50 5 62 178 8 159 1.97e-27 111
MS.gene042058.t1 MTR_1g090723 38.158 152 60 4 62 180 10 160 2.06e-27 114
MS.gene042058.t1 MTR_0036s0150 38.816 152 59 4 62 180 7 157 2.48e-27 114
MS.gene042058.t1 MTR_1g090723 38.158 152 60 4 62 180 10 160 2.49e-27 114
MS.gene042058.t1 MTR_8g076110 41.060 151 56 4 60 178 6 155 2.84e-27 110
MS.gene042058.t1 MTR_8g093580 34.416 154 67 4 60 180 6 158 8.83e-27 112
MS.gene042058.t1 MTR_7g011130 44.355 124 41 2 63 159 22 144 9.63e-27 110
MS.gene042058.t1 MTR_8g099750 41.772 158 55 5 62 182 16 173 1.46e-26 106
MS.gene042058.t1 MTR_7g011120 43.548 124 42 2 63 159 11 133 1.70e-25 105
MS.gene042058.t1 MTR_2g086880 42.857 126 43 3 60 157 18 142 9.01e-25 107
MS.gene042058.t1 MTR_2g086880 42.857 126 43 3 60 157 18 142 1.01e-24 106
MS.gene042058.t1 MTR_8g023840 39.355 155 54 7 55 175 7 155 2.31e-23 101
MS.gene042058.t1 MTR_3g098810 38.272 162 60 5 62 183 16 177 1.14e-22 96.3
MS.gene042058.t1 MTR_3g096140 43.396 106 55 2 79 180 34 138 1.75e-22 97.8
MS.gene042058.t1 MTR_7g070140 57.333 75 31 1 86 159 17 91 4.66e-22 91.7
MS.gene042058.t1 MTR_3g098810 43.651 126 43 3 62 159 16 141 8.03e-22 92.0
MS.gene042058.t1 MTR_8g023860 34.899 149 64 4 58 175 10 156 1.53e-20 93.2
MS.gene042058.t1 MTR_3g070040 39.456 147 56 5 64 178 12 157 2.99e-20 91.3
MS.gene042058.t1 MTR_8g023900 32.278 158 74 5 57 182 9 165 2.03e-18 87.4
MS.gene042058.t1 MTR_8g023900 35.374 147 62 5 63 178 196 340 1.06e-16 82.0
MS.gene042058.t1 MTR_8g023930 33.333 153 69 4 58 179 22 172 1.21e-16 82.0
MS.gene042058.t1 MTR_4g094302 30.323 155 62 4 62 178 13 159 2.78e-14 71.2
MS.gene042058.t1 MTR_4g094302 33.333 126 48 3 62 159 13 130 1.54e-13 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene042058.t1 AT2G02450 73.457 162 14 2 59 191 50 211 2.65e-78 247
MS.gene042058.t1 AT2G02450 73.457 162 14 2 59 191 50 211 3.59e-78 248
MS.gene042058.t1 AT5G39820 53.061 147 39 3 44 160 2 148 5.56e-45 159
MS.gene042058.t1 AT2G17040 47.682 151 49 3 58 179 4 153 1.69e-41 148
MS.gene042058.t1 AT1G26870 52.174 138 38 3 49 158 5 142 6.28e-40 147
MS.gene042058.t1 AT4G27410 48.649 148 44 4 62 178 16 162 4.46e-39 142
MS.gene042058.t1 AT1G61110 45.506 178 53 5 57 191 13 189 1.12e-38 142
MS.gene042058.t1 AT3G04070 36.782 261 104 9 62 279 12 254 1.38e-38 142
MS.gene042058.t1 AT3G15500 49.324 148 43 4 62 178 16 162 3.08e-38 140
MS.gene042058.t1 AT5G08790 47.097 155 44 4 63 181 10 162 6.48e-38 139
MS.gene042058.t1 AT1G52890 49.324 148 43 4 62 178 16 162 7.65e-38 139
MS.gene042058.t1 AT2G43000 40.476 168 67 3 52 187 10 176 1.62e-37 137
MS.gene042058.t1 AT1G69490 45.455 154 48 4 62 180 11 163 4.45e-37 136
MS.gene042058.t1 AT3G04070 34.657 277 104 9 62 279 12 270 6.02e-37 138
MS.gene042058.t1 AT3G03200 45.570 158 51 4 62 185 8 164 1.46e-36 139
MS.gene042058.t1 AT4G27410 43.636 165 44 4 62 178 16 179 2.01e-36 135
MS.gene042058.t1 AT1G01720 46.203 158 48 3 62 184 9 164 2.39e-36 135
MS.gene042058.t1 AT5G63790 46.753 154 44 4 63 180 53 204 3.32e-36 135
MS.gene042058.t1 AT5G63790 46.753 154 44 4 63 180 63 214 3.66e-36 135
MS.gene042058.t1 AT3G17730 45.098 153 50 4 62 181 8 159 4.27e-36 133
MS.gene042058.t1 AT1G77450 46.753 154 46 4 62 181 12 163 7.33e-36 132
MS.gene042058.t1 AT5G17260 44.937 158 52 4 62 185 8 164 1.19e-35 137
MS.gene042058.t1 AT3G10490 45.752 153 48 4 60 178 27 178 1.79e-35 131
MS.gene042058.t1 AT3G15510 42.683 164 51 4 64 184 21 184 2.13e-35 134
MS.gene042058.t1 AT1G76420 43.333 150 54 3 62 180 24 173 3.07e-35 133
MS.gene042058.t1 AT3G10490 44.872 156 51 4 60 181 27 181 1.14e-34 134
MS.gene042058.t1 AT3G10480 44.516 155 52 4 60 181 27 180 1.18e-34 134
MS.gene042058.t1 AT5G39610 42.593 162 53 4 53 178 13 170 1.41e-34 130
MS.gene042058.t1 AT3G10480 44.231 156 52 4 60 181 27 181 1.67e-34 133
MS.gene042058.t1 AT3G29035 45.833 144 43 4 46 159 11 149 7.22e-34 129
MS.gene042058.t1 AT3G15170 44.805 154 51 4 62 181 22 175 7.40e-34 129
MS.gene042058.t1 AT1G65910 45.098 153 50 4 62 181 8 159 1.42e-33 132
MS.gene042058.t1 AT1G34180 41.830 153 55 3 62 181 18 169 1.14e-32 128
MS.gene042058.t1 AT2G24430 40.373 161 65 4 49 178 5 165 1.94e-32 125
MS.gene042058.t1 AT2G24430 40.373 161 65 4 49 178 5 165 1.94e-32 125
MS.gene042058.t1 AT5G07680 43.860 171 54 7 52 185 10 175 3.90e-32 124
MS.gene042058.t1 AT1G34180 42.105 152 54 3 62 180 18 168 4.73e-32 128
MS.gene042058.t1 AT3G18400 43.421 152 47 6 62 179 7 153 7.21e-32 123
MS.gene042058.t1 AT5G61430 43.137 153 51 5 62 180 18 168 1.54e-31 123
MS.gene042058.t1 AT1G34190 41.447 152 55 3 62 180 18 168 2.26e-31 125
MS.gene042058.t1 AT3G04060 42.384 151 52 3 62 178 22 171 2.32e-31 122
MS.gene042058.t1 AT1G79580 42.667 150 55 3 60 178 17 166 2.36e-31 123
MS.gene042058.t1 AT1G79580 42.667 150 55 3 60 178 17 166 2.36e-31 123
MS.gene042058.t1 AT1G79580 42.667 150 55 3 60 178 17 166 2.36e-31 123
MS.gene042058.t1 AT1G79580 42.667 150 55 3 60 178 17 166 2.36e-31 123
MS.gene042058.t1 AT1G79580 42.667 150 55 3 60 178 17 166 2.36e-31 123
MS.gene042058.t1 AT5G07680 44.720 161 48 6 62 185 5 161 3.15e-31 121
MS.gene042058.t1 AT1G34180 39.024 164 54 3 62 180 18 180 6.43e-31 123
MS.gene042058.t1 AT1G33280 39.869 153 60 3 60 181 8 159 8.19e-31 120
MS.gene042058.t1 AT1G52880 45.223 157 44 5 64 178 21 177 9.99e-31 120
MS.gene042058.t1 AT5G46590 43.243 148 50 3 62 175 8 155 1.10e-30 119
MS.gene042058.t1 AT1G62700 42.384 151 54 4 60 178 7 156 1.20e-30 121
MS.gene042058.t1 AT1G62700 42.384 151 54 4 60 178 7 156 1.20e-30 121
MS.gene042058.t1 AT1G12260 42.384 151 54 4 60 178 7 156 1.57e-30 121
MS.gene042058.t1 AT5G24590 37.736 159 66 2 63 188 16 174 1.58e-30 122
MS.gene042058.t1 AT1G12260 42.384 151 54 4 60 178 7 156 1.78e-30 120
MS.gene042058.t1 AT1G34180 39.024 164 54 3 62 180 18 180 1.92e-30 123
MS.gene042058.t1 AT1G56010 42.105 152 52 5 62 178 21 171 2.47e-30 119
MS.gene042058.t1 AT5G04410 39.610 154 59 4 60 180 9 161 3.67e-30 122
MS.gene042058.t1 AT5G18270 47.200 125 39 1 62 159 23 147 4.42e-30 119
MS.gene042058.t1 AT5G46590 45.455 132 43 2 62 164 8 139 4.68e-30 117
MS.gene042058.t1 AT5G18270 47.200 125 39 1 62 159 23 147 4.84e-30 119
MS.gene042058.t1 AT3G10500 38.961 154 60 4 60 180 9 161 7.76e-30 121
MS.gene042058.t1 AT5G53950 47.059 136 42 4 54 159 9 144 9.28e-30 119
MS.gene042058.t1 AT4G17980 42.484 153 52 4 62 178 8 160 1.19e-29 117
MS.gene042058.t1 AT4G17980 42.484 153 52 4 62 178 8 160 1.23e-29 116
MS.gene042058.t1 AT5G13180 47.651 149 48 5 62 180 16 164 1.25e-29 115
MS.gene042058.t1 AT2G46770 36.686 169 59 4 60 181 16 183 1.85e-29 118
MS.gene042058.t1 AT4G10350 43.077 130 43 2 60 159 9 137 1.91e-29 117
MS.gene042058.t1 AT4G36160 28.975 283 152 7 60 306 10 279 2.11e-29 118
MS.gene042058.t1 AT4G36160 28.975 283 152 7 60 306 10 279 2.11e-29 118
MS.gene042058.t1 AT3G61910 45.455 132 41 3 60 161 11 141 2.11e-29 117
MS.gene042058.t1 AT4G36160 28.975 283 152 7 60 306 14 283 2.45e-29 117
MS.gene042058.t1 AT4G35580 50.400 125 32 3 63 158 12 135 2.56e-29 119
MS.gene042058.t1 AT4G35580 50.400 125 32 3 63 158 12 135 2.59e-29 120
MS.gene042058.t1 AT5G62380 37.349 166 63 4 62 191 9 169 2.70e-29 117
MS.gene042058.t1 AT5G62380 37.349 166 63 4 62 191 9 169 2.70e-29 117
MS.gene042058.t1 AT4G35580 50.400 125 32 3 63 158 12 135 2.77e-29 119
MS.gene042058.t1 AT3G12977 42.763 152 48 5 62 178 20 167 3.03e-29 115
MS.gene042058.t1 AT1G54330 44.218 147 51 4 62 178 8 153 9.66e-29 114
MS.gene042058.t1 AT3G12910 44.056 143 50 2 48 160 9 151 1.08e-28 114
MS.gene042058.t1 AT1G33060 40.940 149 54 3 63 178 27 174 1.16e-28 118
MS.gene042058.t1 AT1G33060 40.940 149 54 3 63 178 27 174 1.28e-28 118
MS.gene042058.t1 AT1G32510 40.462 173 59 5 62 194 8 176 1.37e-28 114
MS.gene042058.t1 AT1G71930 40.940 149 55 4 62 178 11 158 1.60e-28 114
MS.gene042058.t1 AT1G71930 40.940 149 55 4 62 178 11 158 1.60e-28 114
MS.gene042058.t1 AT2G33480 44.681 141 51 4 62 176 17 156 2.07e-28 112
MS.gene042058.t1 AT4G28530 38.889 162 55 3 62 179 12 173 2.55e-28 114
MS.gene042058.t1 AT1G32770 43.077 130 43 2 60 159 16 144 3.36e-28 114
MS.gene042058.t1 AT2G18060 40.397 151 57 4 60 178 9 158 4.10e-28 114
MS.gene042058.t1 AT2G18060 40.397 151 57 4 60 178 9 158 4.10e-28 114
MS.gene042058.t1 AT2G33480 46.154 143 48 5 62 176 17 158 5.21e-28 111
MS.gene042058.t1 AT5G22380 39.506 162 59 3 58 180 3 164 9.90e-28 110
MS.gene042058.t1 AT3G10480 47.788 113 53 2 74 181 103 214 6.59e-27 112
MS.gene042058.t1 AT3G49530 37.584 149 60 3 63 178 16 164 7.93e-27 111
MS.gene042058.t1 AT3G49530 37.267 161 64 4 63 186 16 176 9.71e-27 112
MS.gene042058.t1 AT1G56010 47.619 105 47 3 81 178 1 104 1.02e-26 108
MS.gene042058.t1 AT5G61430 49.533 107 45 4 81 180 1 105 1.46e-26 107
MS.gene042058.t1 AT1G32870 40.000 160 58 5 56 180 6 162 3.14e-26 110
MS.gene042058.t1 AT1G32870 40.000 160 58 5 56 180 6 162 3.16e-26 110
MS.gene042058.t1 AT3G44350 34.804 204 75 8 63 212 8 207 3.18e-26 106
MS.gene042058.t1 AT3G12977 48.571 105 42 3 82 178 14 114 4.78e-26 105
MS.gene042058.t1 AT1G32870 40.000 160 58 5 56 180 42 198 5.49e-26 110
MS.gene042058.t1 AT5G66300 39.474 152 58 5 60 178 12 162 1.14e-25 105
MS.gene042058.t1 AT4G10350 43.590 117 56 4 73 181 2 116 2.10e-24 102
MS.gene042058.t1 AT3G44350 41.406 128 43 3 63 158 8 135 7.03e-24 97.4
MS.gene042058.t1 AT5G64060 30.290 241 117 7 60 267 6 228 1.27e-23 101
MS.gene042058.t1 AT5G09330 35.065 154 66 4 60 180 6 158 1.30e-23 103
MS.gene042058.t1 AT5G09330 35.065 154 66 4 60 180 6 158 1.30e-23 103
MS.gene042058.t1 AT5G09330 35.065 154 66 4 60 180 6 158 1.30e-23 103
MS.gene042058.t1 AT5G09330 35.065 154 66 4 60 180 6 158 1.30e-23 103
MS.gene042058.t1 AT5G09330 35.065 154 66 4 60 180 6 158 1.30e-23 103
MS.gene042058.t1 AT2G27300 37.086 151 57 5 60 179 14 157 2.35e-23 100
MS.gene042058.t1 AT2G43000 45.918 98 47 2 95 187 2 98 8.36e-23 95.5
MS.gene042058.t1 AT2G33480 50.526 95 42 3 86 176 8 101 4.67e-22 94.0
MS.gene042058.t1 AT5G22290 35.333 150 66 4 56 177 17 163 1.15e-21 95.5
MS.gene042058.t1 AT5G04395 35.417 144 51 3 62 163 30 173 5.30e-21 90.5
MS.gene042058.t1 AT3G44290 38.400 125 48 3 61 157 15 138 2.22e-20 89.7
MS.gene042058.t1 AT4G01550 34.161 161 67 5 61 186 5 161 5.05e-20 92.0
MS.gene042058.t1 AT3G44290 38.400 125 48 3 61 157 15 138 7.79e-20 90.1
MS.gene042058.t1 AT3G10490 50.617 81 34 2 106 181 2 81 1.08e-19 90.1
MS.gene042058.t1 AT3G10490 50.617 81 34 2 106 181 2 81 1.08e-19 90.1
MS.gene042058.t1 AT4G01540 35.849 159 61 6 61 182 5 159 1.13e-18 87.8
MS.gene042058.t1 AT4G01520 35.669 157 60 6 63 182 7 159 1.50e-18 85.9
MS.gene042058.t1 AT4G01540 36.306 157 59 6 63 182 7 159 1.85e-18 87.0
MS.gene042058.t1 AT4G01540 36.306 157 59 6 63 182 7 159 2.10e-18 87.4
MS.gene042058.t1 AT4G01540 36.306 157 59 6 63 182 7 159 2.47e-18 87.0
MS.gene042058.t1 AT3G04420 30.263 152 73 3 63 183 6 155 7.78e-15 75.1
MS.gene042058.t1 AT3G04420 30.263 152 73 3 63 183 6 155 1.25e-14 75.1
MS.gene042058.t1 AT1G02250 31.507 146 64 4 63 175 6 148 3.74e-14 73.9
MS.gene042058.t1 AT5G64530 35.433 127 42 5 62 160 5 119 2.23e-13 68.2
MS.gene042058.t1 AT4G28530 35.156 128 35 3 62 143 12 137 3.07e-13 70.5
MS.gene042058.t1 AT1G02230 30.822 146 65 4 63 175 6 148 4.07e-13 70.5
MS.gene042058.t1 AT2G18060 42.857 70 37 2 111 178 2 70 1.37e-12 68.2
MS.gene042058.t1 AT1G02220 29.605 152 71 4 63 183 6 152 5.89e-12 67.4

Find 107 sgRNAs with CRISPR-Local

Find 168 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGTAACAACTTCTGGTTAT+TGG 0.211019 8.3:-289227 MS.gene042058:CDS
GATGATGATGGTCGTGTAAT+TGG 0.239615 8.3:+288200 None:intergenic
TAAGCAGCAAAATGAAATAT+TGG 0.264868 8.3:-288141 MS.gene042058:CDS
ACTGAAAACTTTCGTTCAAT+TGG 0.296485 8.3:-289174 MS.gene042058:CDS
CCTAATCGTGTAACAACTTC+TGG 0.308486 8.3:-289234 MS.gene042058:CDS
CCAGAAGTTGTTACACGATT+AGG 0.317297 8.3:+289234 None:intergenic
ATATCGTTCGGTTTCATGTT+GGG 0.335622 8.3:+289068 None:intergenic
AAGGAGGTTGGAAATTGATT+TGG 0.344511 8.3:+287642 None:intergenic
TGAAGCTGAGACTGGGAAAA+TGG 0.347823 8.3:+287839 None:intergenic
GCTGCCGCTGAAGCTGAGAC+TGG 0.355613 8.3:+287831 None:intergenic
GTAGACAAATGATTGGGATT+TGG 0.373594 8.3:+287687 None:intergenic
CAACTGGTTCGGATGCCTTT+GGG 0.374805 8.3:+289114 None:intergenic
CCAACTGGTTCGGATGCCTT+TGG 0.377419 8.3:+289113 None:intergenic
AAGCAGCAAAATGAAATATT+GGG 0.379687 8.3:-288140 MS.gene042058:CDS
TGATCACATAGTTAACAAAA+TGG 0.392091 8.3:-288078 MS.gene042058:CDS
AAGCTCATGCTGCTCATGTT+AGG 0.402422 8.3:+289923 None:intergenic
TCTTCTGAACGGTAATTAGT+AGG 0.410368 8.3:+287978 None:intergenic
GATCATGTCACAACCACTCT+TGG 0.411521 8.3:-288029 MS.gene042058:CDS
ATGTGATCATCAATTGTCTT+TGG 0.414276 8.3:+288092 None:intergenic
ATGATGATGGTCGTGTAATT+GGG 0.415001 8.3:+288201 None:intergenic
GAGGTGTTGTTACTACTGTT+GGG 0.428986 8.3:+287570 None:intergenic
TGCAGCACTGGTAGCAGTAT+TGG 0.434071 8.3:+287794 None:intergenic
TTGGGGTGATTATGATCCTC+AGG 0.436862 8.3:+287588 None:intergenic
CAGCAATGTAGACAAATGAT+TGG 0.439526 8.3:+287680 None:intergenic
TCTGGTTATTGGAAAGCAAC+AGG 0.440994 8.3:-289216 MS.gene042058:CDS
GATATCGTTCGGTTTCATGT+TGG 0.441960 8.3:+289067 None:intergenic
TTGGGAATGGGATTTGTTGT+TGG 0.446359 8.3:-288122 MS.gene042058:CDS
TGATGATGGATGATCTCAAT+AGG 0.454191 8.3:-287770 MS.gene042058:CDS
GCAAAATGAAATATTGGGAA+TGG 0.458597 8.3:-288135 MS.gene042058:CDS
GGAGGTGTTGTTACTACTGT+TGG 0.465590 8.3:+287569 None:intergenic
CAAAATGAAATATTGGGAAT+GGG 0.469377 8.3:-288134 MS.gene042058:CDS
GAGCATGACGTGGTTATGCC+AGG 0.470442 8.3:-289800 MS.gene042058:CDS
TCTCTGACCGACTGTGGGAC+TGG 0.472209 8.3:-287620 MS.gene042058:CDS
TGATTATGATCCTCAGGGAT+TGG 0.472665 8.3:+287594 None:intergenic
ATACTCATTCATAATCCAAC+TGG 0.474720 8.3:+289098 None:intergenic
CATTCATAATCCAACTGGTT+CGG 0.480582 8.3:+289103 None:intergenic
AGGAGGAGTATTGCTGTACT+TGG 0.484755 8.3:+288001 None:intergenic
CAAGCTCTTCTTCAGTTGGA+TGG 0.486659 8.3:+289768 None:intergenic
AGTAATTAGTGATTACTTGA+AGG 0.490931 8.3:+287548 None:intergenic
ATCATGTCACAACCACTCTT+GGG 0.491534 8.3:-288028 MS.gene042058:CDS
GGCGCTGCCGCCACCACAAG+CGG 0.493139 8.3:+287860 None:intergenic
GATTTGGATGATTGAGATGT+GGG 0.497103 8.3:+287703 None:intergenic
TTCCCTCGACCTTACGGCGA+AGG 0.497938 8.3:+289735 None:intergenic
CTGCCGCTGAAGCTGAGACT+GGG 0.499254 8.3:+287832 None:intergenic
GGAAATTGATTTGGTAACAT+TGG 0.503521 8.3:+287651 None:intergenic
TATCGTTCGGTTTCATGTTG+GGG 0.505358 8.3:+289069 None:intergenic
TTAGTCTCCGCTTGTGGTGG+CGG 0.506486 8.3:-287867 MS.gene042058:CDS
TCTACAAGCTCTTCTTCAGT+TGG 0.506937 8.3:+289764 None:intergenic
TGAAACCGAACGATATCAAA+AGG 0.509230 8.3:-289061 MS.gene042058:intron
ATCCATCATCATTGCAGCAC+TGG 0.512112 8.3:+287782 None:intergenic
GCAATAGCAGCAGCAGGAGG+AGG 0.514762 8.3:-289962 MS.gene042058:CDS
TTTGGCAGCAATCGGAGAGA+AGG 0.516877 8.3:-289307 MS.gene042058:CDS
GGAAAGCAACAGGAGCAGAT+AGG 0.517048 8.3:-289206 MS.gene042058:CDS
AGCAATGTAGACAAATGATT+GGG 0.519527 8.3:+287681 None:intergenic
TGAGCAGCTTTGGCAGCAAT+CGG 0.520334 8.3:-289315 MS.gene042058:intron
GGGTGAGATATCCCTATGTC+GGG 0.523444 8.3:-288273 MS.gene042058:intron
TACCGTTCAGAAGATGAAGA+AGG 0.528026 8.3:-287969 MS.gene042058:CDS
CCTCCTTCTCTGACCGACTG+TGG 0.530397 8.3:-287626 MS.gene042058:CDS
CCACAGTCGGTCAGAGAAGG+AGG 0.546229 8.3:+287626 None:intergenic
TGGGAGACAACGAGGGAGGG+AGG 0.546963 8.3:+288220 None:intergenic
GCATATTGTACTAGTTGCCT+AGG 0.547334 8.3:+287909 None:intergenic
TGGATGGCAATAGCAGCAGC+AGG 0.551609 8.3:-289968 MS.gene042058:CDS
GTCCCACAGTCGGTCAGAGA+AGG 0.552251 8.3:+287623 None:intergenic
GGGAGACAACGAGGGAGGGA+GGG 0.560158 8.3:+288221 None:intergenic
AGTCGGTCAGAGAAGGAGGT+TGG 0.561135 8.3:+287630 None:intergenic
TACCAGTGCTGCAATGATGA+TGG 0.562350 8.3:-287784 MS.gene042058:CDS
CTCCTTCTCTGACCGACTGT+GGG 0.564074 8.3:-287625 MS.gene042058:CDS
CTAGTACAATATGCAGCTGC+GGG 0.565924 8.3:-287900 MS.gene042058:CDS
ATCCTTCTTCATCTTCTGAA+CGG 0.566170 8.3:+287967 None:intergenic
TGGGGTGATTATGATCCTCA+GGG 0.566445 8.3:+287589 None:intergenic
CACATAGTTAACAAAATGGA+AGG 0.567229 8.3:-288074 MS.gene042058:CDS
GAACGGTAATTAGTAGGAGG+AGG 0.572179 8.3:+287984 None:intergenic
AGGGTGAGATATCCCTATGT+CGG 0.573960 8.3:-288274 MS.gene042058:intron
GGATTTGGATGATTGAGATG+TGG 0.580035 8.3:+287702 None:intergenic
AATTAGTGATTACTTGAAGG+AGG 0.582479 8.3:+287551 None:intergenic
ATGAGCTTGAGTCACGAAGA+TGG 0.587554 8.3:-289908 MS.gene042058:CDS
CTGTTAGTCTCCGCTTGTGG+TGG 0.588546 8.3:-287870 MS.gene042058:CDS
TCTCTTGTATACCCGACATA+GGG 0.588580 8.3:+288262 None:intergenic
CTCTCTTGTATACCCGACAT+AGG 0.590093 8.3:+288261 None:intergenic
CCAAAGGCATCCGAACCAGT+TGG 0.592737 8.3:-289113 MS.gene042058:CDS
CGAGATAGAAAGTATCGAAA+CGG 0.593685 8.3:-289264 MS.gene042058:CDS
AGCATGACGTGGTTATGCCA+GGG 0.596795 8.3:-289799 MS.gene042058:CDS
TGTCGGGTATACAAGAGAGC+AGG 0.602519 8.3:-288257 MS.gene042058:CDS
AATTGGGAGACAACGAGGGA+GGG 0.605068 8.3:+288217 None:intergenic
TTTCGATACTTTCTATCTCG+AGG 0.612931 8.3:+289267 None:intergenic
TCTAACGATAATAGTAACAA+AGG 0.615780 8.3:-289872 MS.gene042058:CDS
TCTCTGTTAGTCTCCGCTTG+TGG 0.618457 8.3:-287873 MS.gene042058:CDS
TTTCCCAGTCTCAGCTTCAG+CGG 0.622682 8.3:-287835 MS.gene042058:CDS
CGACCATCATCATCATCAAG+AGG 0.622961 8.3:-288191 MS.gene042058:CDS
TCTGAACGGTAATTAGTAGG+AGG 0.623921 8.3:+287981 None:intergenic
ACTAGTACAATATGCAGCTG+CGG 0.627166 8.3:-287901 MS.gene042058:CDS
AGGTGTTGTTACTACTGTTG+GGG 0.635388 8.3:+287571 None:intergenic
GCACCTCTTGATGATGATGA+TGG 0.642253 8.3:+288188 None:intergenic
CAGCAATCGGAGAGAAGGAG+TGG 0.646393 8.3:-289302 MS.gene042058:CDS
AGCAGCAGCAACATCAACCT+AGG 0.647554 8.3:-287926 MS.gene042058:CDS
TATTCTGGAAAAGCTCCCAA+AGG 0.650827 8.3:-289129 MS.gene042058:CDS
AAAATGGAAGGAAGCAGTAG+CGG 0.650928 8.3:-288062 MS.gene042058:CDS
GTTGGATGGAAACGAAACCC+TGG 0.652572 8.3:+289782 None:intergenic
TAATTGGGAGACAACGAGGG+AGG 0.654012 8.3:+288216 None:intergenic
CGTGTAATTGGGAGACAACG+AGG 0.654137 8.3:+288212 None:intergenic
TTGGATTCCAGTCCCACAGT+CGG 0.664258 8.3:+287613 None:intergenic
ATGGCAATAGCAGCAGCAGG+AGG 0.668176 8.3:-289965 MS.gene042058:CDS
ATGGAAGGAAGCAGTAGCGG+CGG 0.686399 8.3:-288059 MS.gene042058:CDS
GTACTTGGAAAGCCCAAGAG+TGG 0.699274 8.3:+288016 None:intergenic
GTGTAATTGGGAGACAACGA+GGG 0.701719 8.3:+288213 None:intergenic
TGATGATCACGAGCATGACG+TGG 0.732266 8.3:-289810 MS.gene042058:CDS
GGACTGGAATCCAATCCCTG+AGG 0.753349 8.3:-287604 MS.gene042058:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATAAATAAATATATACC+AGG + chr8.3:287878-287897 None:intergenic 10.0%
!! ATTATATTATTAAATCAAAG+AGG + chr8.3:288010-288029 None:intergenic 10.0%
!! TTATATTATTAAATCAAAGA+GGG + chr8.3:288009-288028 None:intergenic 10.0%
!! TTGAATATATATATACTATA+TGG + chr8.3:288834-288853 None:intergenic 10.0%
!!! TTTTTGATAAATAAATATCT+TGG - chr8.3:288039-288058 MS.gene042058:CDS 10.0%
!! TCAAATTCAAAATTATTGTA+AGG + chr8.3:289216-289235 None:intergenic 15.0%
!! TTGAATTTGAATTTGAATTA+GGG - chr8.3:289232-289251 MS.gene042058:CDS 15.0%
!! TTTGAATTTGAATTTGAATT+AGG - chr8.3:289225-289244 MS.gene042058:CDS 15.0%
!!! TTGTTGTATGAAAATATTTT+AGG + chr8.3:288949-288968 None:intergenic 15.0%
!! AAATATGAAGCAAATAAGTA+AGG + chr8.3:288068-288087 None:intergenic 20.0%
!! AATATGAAGCAAATAAGTAA+GGG + chr8.3:288067-288086 None:intergenic 20.0%
!! ATATATATATACTATATGGC+TGG + chr8.3:288830-288849 None:intergenic 20.0%
!! GTGTGTATACTATATATTTA+TGG + chr8.3:288723-288742 None:intergenic 20.0%
!!! AATATAGCTCTTTAAAACTA+GGG + chr8.3:288659-288678 None:intergenic 20.0%
!!! AATTATGTGATTGAATTTTG+AGG - chr8.3:288156-288175 MS.gene042058:CDS 20.0%
!!! ATATTATGCATCTTGATTTT+GGG - chr8.3:288681-288700 MS.gene042058:intron 20.0%
!!! GAAAGGAATTAATTAATTTG+TGG + chr8.3:289066-289085 None:intergenic 20.0%
!!! TAATATAGCTCTTTAAAACT+AGG + chr8.3:288660-288679 None:intergenic 20.0%
!!! TATATTATGCATCTTGATTT+TGG - chr8.3:288680-288699 MS.gene042058:intron 20.0%
! AAGCAGCAAAATGAAATATT+GGG - chr8.3:289385-289404 MS.gene042058:intron 25.0%
! ATTATTAAATCAAAGAGGGA+TGG + chr8.3:288005-288024 None:intergenic 25.0%
! CAAAATGAAATATTGGGAAT+GGG - chr8.3:289391-289410 MS.gene042058:intron 25.0%
! TAAGCAGCAAAATGAAATAT+TGG - chr8.3:289384-289403 MS.gene042058:intron 25.0%
! TATTGTAAGGATCCAAAATT+TGG + chr8.3:289203-289222 None:intergenic 25.0%
! TCTAACGATAATAGTAACAA+AGG - chr8.3:287653-287672 MS.gene042058:CDS 25.0%
! TGATCACATAGTTAACAAAA+TGG - chr8.3:289447-289466 MS.gene042058:intron 25.0%
! TTATTAAATCAAAGAGGGAT+GGG + chr8.3:288004-288023 None:intergenic 25.0%
!! ATATACCTTTTGATATCGTT+CGG + chr8.3:288472-288491 None:intergenic 25.0%
!! ATGAAATGTATGCCAAATTT+TGG - chr8.3:289188-289207 MS.gene042058:CDS 25.0%
!! GCAGTTATATTTGGTAATTA+AGG + chr8.3:288542-288561 None:intergenic 25.0%
!! TTTTCCAGAATAGAAAACTA+GGG + chr8.3:288388-288407 None:intergenic 25.0%
!!! CATTACTGATTTTTCTTTCA+TGG - chr8.3:288579-288598 MS.gene042058:intron 25.0%
!!! TTTTAAAACCAACAAAGACA+CGG + chr8.3:288629-288648 None:intergenic 25.0%
ACTGAAAACTTTCGTTCAAT+TGG - chr8.3:288351-288370 MS.gene042058:intron 30.0%
AGCAATGTAGACAAATGATT+GGG + chr8.3:289847-289866 None:intergenic 30.0%
ATACTCATTCATAATCCAAC+TGG + chr8.3:288430-288449 None:intergenic 30.0%
ATGTGATCATCAATTGTCTT+TGG + chr8.3:289436-289455 None:intergenic 30.0%
CACATAGTTAACAAAATGGA+AGG - chr8.3:289451-289470 MS.gene042058:intron 30.0%
GCAAAATGAAATATTGGGAA+TGG - chr8.3:289390-289409 MS.gene042058:intron 30.0%
TATATATACTATATGGCTGG+TGG + chr8.3:288827-288846 None:intergenic 30.0%
! CTTTTCCAGAATAGAAAACT+AGG + chr8.3:288389-288408 None:intergenic 30.0%
!! AAAACCCTAGTTTTCTATTC+TGG - chr8.3:288381-288400 MS.gene042058:intron 30.0%
!! GGAAATTGATTTGGTAACAT+TGG + chr8.3:289877-289896 None:intergenic 30.0%
!! TATGTGATTGAATTTTGAGG+TGG - chr8.3:288159-288178 MS.gene042058:CDS 30.0%
AAATGATCACGAGAGATGAA+AGG + chr8.3:289083-289102 None:intergenic 35.0%
AAGGAGGTTGGAAATTGATT+TGG + chr8.3:289886-289905 None:intergenic 35.0%
AGGGATGGGAACAAAAAAAA+GGG + chr8.3:287990-288009 None:intergenic 35.0%
ATATCGTTCGGTTTCATGTT+GGG + chr8.3:288460-288479 None:intergenic 35.0%
ATCCTTCTTCATCTTCTGAA+CGG + chr8.3:289561-289580 None:intergenic 35.0%
CAGCAATGTAGACAAATGAT+TGG + chr8.3:289848-289867 None:intergenic 35.0%
CATTCATAATCCAACTGGTT+CGG + chr8.3:288425-288444 None:intergenic 35.0%
CCAAATATAACTGCTCTTGA+TGG - chr8.3:288548-288567 MS.gene042058:intron 35.0%
CCATCAAGAGCAGTTATATT+TGG + chr8.3:288551-288570 None:intergenic 35.0%
GAGAGGGAATTAATCACAAA+CGG + chr8.3:288978-288997 None:intergenic 35.0%
GATTTGGATGATTGAGATGT+GGG + chr8.3:289825-289844 None:intergenic 35.0%
GTAGACAAATGATTGGGATT+TGG + chr8.3:289841-289860 None:intergenic 35.0%
TATTGAAACCGTGTCTTTGT+TGG - chr8.3:288618-288637 MS.gene042058:intron 35.0%
TCTTCTGAACGGTAATTAGT+AGG + chr8.3:289550-289569 None:intergenic 35.0%
TGAAACCGAACGATATCAAA+AGG - chr8.3:288464-288483 MS.gene042058:intron 35.0%
TTTCGATACTTTCTATCTCG+AGG + chr8.3:288261-288280 None:intergenic 35.0%
! CTAGCTAGCTACTATTGTTT+TGG + chr8.3:288787-288806 None:intergenic 35.0%
! GTGTAACAACTTCTGGTTAT+TGG - chr8.3:288298-288317 MS.gene042058:intron 35.0%
! TATATGATGATGAGCAGCTT+TGG - chr8.3:288200-288219 MS.gene042058:CDS 35.0%
!! ATGATGATGGTCGTGTAATT+GGG + chr8.3:289327-289346 None:intergenic 35.0%
!! CGAGATAGAAAGTATCGAAA+CGG - chr8.3:288261-288280 MS.gene042058:CDS 35.0%
!! TCCAGAATTGCTTTAGGAAA+GGG + chr8.3:287965-287984 None:intergenic 35.0%
!! TGATGATGGATGATCTCAAT+AGG - chr8.3:289755-289774 MS.gene042058:CDS 35.0%
!! TTCCAGAATTGCTTTAGGAA+AGG + chr8.3:287966-287985 None:intergenic 35.0%
AAAATGGAAGGAAGCAGTAG+CGG - chr8.3:289463-289482 MS.gene042058:intron 40.0%
ACTAGTACAATATGCAGCTG+CGG - chr8.3:289624-289643 MS.gene042058:intron 40.0%
AGGGTTTCCAGAATTGCTTT+AGG + chr8.3:287971-287990 None:intergenic 40.0%
ATATACCAGGAAGTTCCCAA+GGG + chr8.3:287865-287884 None:intergenic 40.0%
ATCATGTCACAACCACTCTT+GGG - chr8.3:289497-289516 MS.gene042058:intron 40.0%
ATCTTTATCGCTATGACCCT+TGG - chr8.3:287846-287865 MS.gene042058:CDS 40.0%
CCAGAAGTTGTTACACGATT+AGG + chr8.3:288294-288313 None:intergenic 40.0%
CCTAATCGTGTAACAACTTC+TGG - chr8.3:288291-288310 MS.gene042058:intron 40.0%
GAGGGATGGGAACAAAAAAA+AGG + chr8.3:287991-288010 None:intergenic 40.0%
GATATCGTTCGGTTTCATGT+TGG + chr8.3:288461-288480 None:intergenic 40.0%
GCATATTGTACTAGTTGCCT+AGG + chr8.3:289619-289638 None:intergenic 40.0%
GGATTTGGATGATTGAGATG+TGG + chr8.3:289826-289845 None:intergenic 40.0%
TACCGTTCAGAAGATGAAGA+AGG - chr8.3:289556-289575 MS.gene042058:intron 40.0%
TAGAAGCCAAGAATGCAAGA+GGG - chr8.3:288860-288879 MS.gene042058:intron 40.0%
TATATACCAGGAAGTTCCCA+AGG + chr8.3:287866-287885 None:intergenic 40.0%
TATCGTTCGGTTTCATGTTG+GGG + chr8.3:288459-288478 None:intergenic 40.0%
TCTACAAGCTCTTCTTCAGT+TGG + chr8.3:287764-287783 None:intergenic 40.0%
TCTCTTGTATACCCGACATA+GGG + chr8.3:289266-289285 None:intergenic 40.0%
TCTGAACGGTAATTAGTAGG+AGG + chr8.3:289547-289566 None:intergenic 40.0%
TCTGGTTATTGGAAAGCAAC+AGG - chr8.3:288309-288328 MS.gene042058:intron 40.0%
TCTTTATCGCTATGACCCTT+GGG - chr8.3:287847-287866 MS.gene042058:CDS 40.0%
TGATTATGATCCTCAGGGAT+TGG + chr8.3:289934-289953 None:intergenic 40.0%
TTAGAAGCCAAGAATGCAAG+AGG - chr8.3:288859-288878 MS.gene042058:intron 40.0%
! TATTCTGGAAAAGCTCCCAA+AGG - chr8.3:288396-288415 MS.gene042058:intron 40.0%
!! AGGTGTTGTTACTACTGTTG+GGG + chr8.3:289957-289976 None:intergenic 40.0%
!! CCAGAATTGCTTTAGGAAAG+GGG + chr8.3:287964-287983 None:intergenic 40.0%
!! GAGGTGTTGTTACTACTGTT+GGG + chr8.3:289958-289977 None:intergenic 40.0%
!! GATGATGATGGTCGTGTAAT+TGG + chr8.3:289328-289347 None:intergenic 40.0%
!! GTTTTGGTGTGCTATAGCTT+TGG + chr8.3:288771-288790 None:intergenic 40.0%
!! TCATTTTGATAGTCCAGTGC+AGG - chr8.3:289097-289116 MS.gene042058:CDS 40.0%
!! TTGGGAATGGGATTTGTTGT+TGG - chr8.3:289403-289422 MS.gene042058:intron 40.0%
AAGCTCATGCTGCTCATGTT+AGG + chr8.3:287605-287624 None:intergenic 45.0%
AGGGTGAGATATCCCTATGT+CGG - chr8.3:289251-289270 MS.gene042058:CDS 45.0%
ATCCATCATCATTGCAGCAC+TGG + chr8.3:289746-289765 None:intergenic 45.0%
ATGAGCTTGAGTCACGAAGA+TGG - chr8.3:287617-287636 MS.gene042058:CDS 45.0%
CAAGCTCTTCTTCAGTTGGA+TGG + chr8.3:287760-287779 None:intergenic 45.0%
CCCCTTTCCTAAAGCAATTC+TGG - chr8.3:287961-287980 MS.gene042058:CDS 45.0%
CGACCATCATCATCATCAAG+AGG - chr8.3:289334-289353 MS.gene042058:intron 45.0%
CTAGTACAATATGCAGCTGC+GGG - chr8.3:289625-289644 MS.gene042058:intron 45.0%
CTCTCTTGTATACCCGACAT+AGG + chr8.3:289267-289286 None:intergenic 45.0%
GAACGGTAATTAGTAGGAGG+AGG + chr8.3:289544-289563 None:intergenic 45.0%
GATCATGTCACAACCACTCT+TGG - chr8.3:289496-289515 MS.gene042058:intron 45.0%
GTGTAATTGGGAGACAACGA+GGG + chr8.3:289315-289334 None:intergenic 45.0%
TACCAGTGCTGCAATGATGA+TGG - chr8.3:289741-289760 MS.gene042058:intron 45.0%
TGAAGCTGAGACTGGGAAAA+TGG + chr8.3:289689-289708 None:intergenic 45.0%
TGGGGTGATTATGATCCTCA+GGG + chr8.3:289939-289958 None:intergenic 45.0%
TTGGGGTGATTATGATCCTC+AGG + chr8.3:289940-289959 None:intergenic 45.0%
! AACGTTTTCCCTCGACCTTA+CGG + chr8.3:287799-287818 None:intergenic 45.0%
!! AGGAGGAGTATTGCTGTACT+TGG + chr8.3:289527-289546 None:intergenic 45.0%
!! GCACCTCTTGATGATGATGA+TGG + chr8.3:289340-289359 None:intergenic 45.0%
!! GGAGGTGTTGTTACTACTGT+TGG + chr8.3:289959-289978 None:intergenic 45.0%
AATTGGGAGACAACGAGGGA+GGG + chr8.3:289311-289330 None:intergenic 50.0%
AGAGTTCTACCTTCGCCGTA+AGG - chr8.3:287781-287800 MS.gene042058:CDS 50.0%
AGCAGCAGCAACATCAACCT+AGG - chr8.3:289599-289618 MS.gene042058:intron 50.0%
AGCATGACGTGGTTATGCCA+GGG - chr8.3:287726-287745 MS.gene042058:CDS 50.0%
AGCTAGCTGCGTGAAACTTG+CGG - chr8.3:288801-288820 MS.gene042058:intron 50.0%
CGTGTAATTGGGAGACAACG+AGG + chr8.3:289316-289335 None:intergenic 50.0%
CTCTCTCCCTCTTGCATTCT+TGG + chr8.3:288869-288888 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGAGA+GGG + chr8.3:288994-289013 None:intergenic 50.0%
GGAAAGCAACAGGAGCAGAT+AGG - chr8.3:288319-288338 MS.gene042058:intron 50.0%
GGGTGAGATATCCCTATGTC+GGG - chr8.3:289252-289271 MS.gene042058:CDS 50.0%
GTACAGTAGTCTACCTGCAC+TGG + chr8.3:289113-289132 None:intergenic 50.0%
GTACTTGGAAAGCCCAAGAG+TGG + chr8.3:289512-289531 None:intergenic 50.0%
GTTGGATGGAAACGAAACCC+TGG + chr8.3:287746-287765 None:intergenic 50.0%
TAATTGGGAGACAACGAGGG+AGG + chr8.3:289312-289331 None:intergenic 50.0%
TATGACCCTTGGGAACTTCC+TGG - chr8.3:287857-287876 MS.gene042058:CDS 50.0%
TGAGAGAGAGAGAGAGAGAG+AGG + chr8.3:288995-289014 None:intergenic 50.0%
TGATGATCACGAGCATGACG+TGG - chr8.3:287715-287734 MS.gene042058:CDS 50.0%
TGTCGGGTATACAAGAGAGC+AGG - chr8.3:289268-289287 MS.gene042058:CDS 50.0%
TTGGATTCCAGTCCCACAGT+CGG + chr8.3:289915-289934 None:intergenic 50.0%
TTTCCCAGTCTCAGCTTCAG+CGG - chr8.3:289690-289709 MS.gene042058:intron 50.0%
TTTGGCAGCAATCGGAGAGA+AGG - chr8.3:288218-288237 MS.gene042058:CDS 50.0%
! TCTCTGTTAGTCTCCGCTTG+TGG - chr8.3:289652-289671 MS.gene042058:intron 50.0%
! TGAGCAGCTTTGGCAGCAAT+CGG - chr8.3:288210-288229 MS.gene042058:CDS 50.0%
!! CAACTGGTTCGGATGCCTTT+GGG + chr8.3:288414-288433 None:intergenic 50.0%
!! TGCAGCACTGGTAGCAGTAT+TGG + chr8.3:289734-289753 None:intergenic 50.0%
AGTCGGTCAGAGAAGGAGGT+TGG + chr8.3:289898-289917 None:intergenic 55.0%
ATGGAAGGAAGCAGTAGCGG+CGG - chr8.3:289466-289485 MS.gene042058:intron 55.0%
ATGGCAATAGCAGCAGCAGG+AGG - chr8.3:287560-287579 MS.gene042058:CDS 55.0%
CAGCAATCGGAGAGAAGGAG+TGG - chr8.3:288223-288242 MS.gene042058:CDS 55.0%
CTCCTTCTCTGACCGACTGT+GGG - chr8.3:289900-289919 MS.gene042058:CDS 55.0%
GAGCATGACGTGGTTATGCC+AGG - chr8.3:287725-287744 MS.gene042058:CDS 55.0%
GGACTGGAATCCAATCCCTG+AGG - chr8.3:289921-289940 MS.gene042058:CDS 55.0%
TACCTTCGCCGTAAGGTCGA+GGG - chr8.3:287788-287807 MS.gene042058:CDS 55.0%
TTAGTCTCCGCTTGTGGTGG+CGG - chr8.3:289658-289677 MS.gene042058:intron 55.0%
! CTGTTAGTCTCCGCTTGTGG+TGG - chr8.3:289655-289674 MS.gene042058:intron 55.0%
!! CCAAAGGCATCCGAACCAGT+TGG - chr8.3:288412-288431 MS.gene042058:intron 55.0%
!! CCAACTGGTTCGGATGCCTT+TGG + chr8.3:288415-288434 None:intergenic 55.0%
CCACAGTCGGTCAGAGAAGG+AGG + chr8.3:289902-289921 None:intergenic 60.0%
CCTCCTTCTCTGACCGACTG+TGG - chr8.3:289899-289918 MS.gene042058:CDS 60.0%
CTACCTTCGCCGTAAGGTCG+AGG - chr8.3:287787-287806 MS.gene042058:CDS 60.0%
CTGCCGCTGAAGCTGAGACT+GGG + chr8.3:289696-289715 None:intergenic 60.0%
GCAATAGCAGCAGCAGGAGG+AGG - chr8.3:287563-287582 MS.gene042058:CDS 60.0%
GTCCCACAGTCGGTCAGAGA+AGG + chr8.3:289905-289924 None:intergenic 60.0%
TCTCTGACCGACTGTGGGAC+TGG - chr8.3:289905-289924 MS.gene042058:CDS 60.0%
TTCCCTCGACCTTACGGCGA+AGG + chr8.3:287793-287812 None:intergenic 60.0%
GCTGCCGCTGAAGCTGAGAC+TGG + chr8.3:289697-289716 None:intergenic 65.0%
GGGAGACAACGAGGGAGGGA+GGG + chr8.3:289307-289326 None:intergenic 65.0%
TGGGAGACAACGAGGGAGGG+AGG + chr8.3:289308-289327 None:intergenic 65.0%
GGCGCTGCCGCCACCACAAG+CGG + chr8.3:289668-289687 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 287560 289987 287560 ID=MS.gene042058
chr8.3 mRNA 287560 289987 287560 ID=MS.gene042058.t1;Parent=MS.gene042058
chr8.3 exon 289750 289987 289750 ID=MS.gene042058.t1.exon1;Parent=MS.gene042058.t1
chr8.3 CDS 289750 289987 289750 ID=cds.MS.gene042058.t1;Parent=MS.gene042058.t1
chr8.3 exon 289062 289330 289062 ID=MS.gene042058.t1.exon2;Parent=MS.gene042058.t1
chr8.3 CDS 289062 289330 289062 ID=cds.MS.gene042058.t1;Parent=MS.gene042058.t1
chr8.3 exon 287560 288288 287560 ID=MS.gene042058.t1.exon3;Parent=MS.gene042058.t1
chr8.3 CDS 287560 288288 287560 ID=cds.MS.gene042058.t1;Parent=MS.gene042058.t1
Gene Sequence

>MS.gene042058

ATGGCAATAGCAGCAGCAGGAGGAGGAGCAGCAACATCATCACCTAACATGAGCAGCATGAGCTTGAGTCACGAAGATGGAACTGCTACTACTTCTAACGATAATAGTAACAAAGGAGCTACAGCTACAGTTACAGTAGTAGATGATGATGATGATGATGATCACGAGCATGACGTGGTTATGCCAGGGTTTCGTTTCCATCCAACTGAAGAAGAGCTTGTAGAGTTCTACCTTCGCCGTAAGGTCGAGGGAAAACGTTTCAACGTTGAGCTTATTACTTTTCTCGATCTTTATCGCTATGACCCTTGGGAACTTCCTGGTATATATTTATTTATATTTATAGTCATGCTCACACTCATCACATATTTATATAATAATTATAATTATATATATGAGAACTTCCCCTTTCCTAAAGCAATTCTGGAAACCCTTTTTTTTGTTCCCATCCCTCTTTGATTTAATAATATAATAATACTTCTTTTTTGATAAATAAATATCTTGGCTCCCTTACTTATTTGCTTCATATTTATTTGCATACAAATTAAGAGAAACGTGCGTGAGTCTATTTAATTTAATAATTCACTTCACATATATTTAATTATGTGATTGAATTTTGAGGTGGAATTTGATATTTGAATTGTATATGATGATGAGCAGCTTTGGCAGCAATCGGAGAGAAGGAGTGGTACTTTTATGTGCCTCGAGATAGAAAGTATCGAAACGGTGATCGTCCTAATCGTGTAACAACTTCTGGTTATTGGAAAGCAACAGGAGCAGATAGGATGATTCGAACTGAAAACTTTCGTTCAATTGGACTCAAGAAAACCCTAGTTTTCTATTCTGGAAAAGCTCCCAAAGGCATCCGAACCAGTTGGATTATGAATGAGTATAGATTACCCCAACATGAAACCGAACGATATCAAAAGGTATATAATATTTCAGATTCTTTATACTTTAAATAATATGAATAATTACTTCTCCTTAATTACCAAATATAACTGCTCTTGATGGAGTTAATTCATTACTGATTTTTCTTTCATGGTGTATATGAATGAATATATTGAAACCGTGTCTTTGTTGGTTTTAAAAAACTCAACCCTAGTTTTAAAGAGCTATATTATATATTATGCATCTTGATTTTGGGTCGTCTTTTTCAGAATCCATAAATATATAGTATACACACGCTTGATTTCTAACTAATCATAGATCCAAAGCTATAGCACACCAAAACAATAGTAGCTAGCTAGCTGCGTGAAACTTGCGGCCACCAGCCATATAGTATATATATATTCAAATTAGTTAGAAGCCAAGAATGCAAGAGGGAGAGAGTGAGCAATTAATTATTACGTGATAGAAATTAAAGAAAGAAAGAGAGTACAAACAGTGCCTAAAATATTTTCATACAACAACTATCACCGTTTGTGATTAATTCCCTCTCTCTCTCTCTCTCTCTCATACATACATACACATGTACTATTTCATGCATGAATTTCAAAATTCTGACCACAAATTAATTAATTCCTTTCATCTCTCGTGATCATTTTGATAGTCCAGTGCAGGTAGACTACTGTACGTTTTATTTTCAAATTTCTTTCAACAATTTAATTAGTGTATATGTTCATTCAAATATGAAATGTATGCCAAATTTTGGATCCTTACAATAATTTTGAATTTGAATTTGAATTTGAATTAGGGTGAGATATCCCTATGTCGGGTATACAAGAGAGCAGGAGTAGAAGATCATCCCTCCCTCCCTCGTTGTCTCCCAATTACACGACCATCATCATCATCAAGAGGTGCTACTGCTTCACATTCAGACAAGAATAAGCAGCAAAATGAAATATTGGGAATGGGATTTGTTGTTGGACAATCACCAAAGACAATTGATGATCACATAGTTAACAAAATGGAAGGAAGCAGTAGCGGCGGTAATTCAGATCATGTCACAACCACTCTTGGGCTTTCCAAGTACAGCAATACTCCTCCTCCTACTAATTACCGTTCAGAAGATGAAGAAGGATTGATGATGATGCAGCAGCAGCAGCAGCAACATCAACCTAGGCAACTAGTACAATATGCAGCTGCGGGAAACTCTCTGTTAGTCTCCGCTTGTGGTGGCGGCAGCGCCATTTTCCCAGTCTCAGCTTCAGCGGCAGCAGCAGTGAGCTGTTCCAATACTGCTACCAGTGCTGCAATGATGATGGATGATCTCAATAGGCTTGTAAGTTATCAACAACAGCAATATTGTTACAATGTTCAAAACCCACATCTCAATCATCCAAATCCCAATCATTTGTCTACATTGCTGATGCAACCAATGTTACCAAATCAATTTCCAACCTCCTTCTCTGACCGACTGTGGGACTGGAATCCAATCCCTGAGGATCATAATCACCCCAACAGTAGTAACAACACCTCCTTCAAGTAA
Protein sequence

>MS.gene042058.t1

MAIAAAGGGAATSSPNMSSMSLSHEDGTATTSNDNSNKGATATVTVVDDDDDDDHEHDVVMPGFRFHPTEEELVEFYLRPLAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTENFRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKISLCRVYKRAGVEDHPSLPRCLPITRPSSSSRGATASHSDKNKQQNEILGMGFVVGQSPKTIDDHIVNKMEGSSSGGNSDHVTTTLGLSKYSNTPPPTNYRSEDEEGLMMMQQQQQQHQPRQLVQYAAAGNSLLVSACGGGSAIFPVSASAAAAVSCSNTATSAAMMMDDLNRLVSYQQQQYCYNVQNPHLNHPNPNHLSTLLMQPMLPNQFPTSFSDRLWDWNPIPEDHNHPNSSNNTSFK