Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042068.t1 | XP_024632961.1 | 84.7 | 793 | 93 | 4 | 1 | 765 | 1 | 793 | 0.00E+00 | 1343.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042068.t1 | Q9SZL8 | 27.0 | 636 | 394 | 11 | 32 | 665 | 70 | 637 | 2.1e-63 | 245.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042068.t1 | D3YBB9 | 76.7 | 774 | 160 | 4 | 1 | 764 | 49 | 812 | 0.0e+00 | 1191.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene042068.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042068.t1 | MTR_0558s0020 | 86.824 | 296 | 38 | 1 | 1 | 295 | 1 | 296 | 0.0 | 546 |
| MS.gene042068.t1 | MTR_1g083640 | 82.394 | 284 | 34 | 1 | 1 | 268 | 1 | 284 | 3.00e-171 | 494 |
| MS.gene042068.t1 | MTR_8g446020 | 73.220 | 295 | 40 | 1 | 1 | 295 | 1 | 256 | 1.24e-151 | 442 |
| MS.gene042068.t1 | MTR_6g090505 | 82.700 | 237 | 41 | 0 | 65 | 301 | 1 | 237 | 1.26e-141 | 421 |
| MS.gene042068.t1 | MTR_6g090505 | 67.647 | 102 | 6 | 2 | 396 | 495 | 230 | 306 | 3.11e-34 | 135 |
| MS.gene042068.t1 | MTR_6g090505 | 77.551 | 49 | 11 | 0 | 567 | 615 | 314 | 362 | 8.91e-12 | 67.8 |
| MS.gene042068.t1 | MTR_2g014100 | 81.224 | 245 | 37 | 1 | 1 | 236 | 1 | 245 | 1.46e-140 | 414 |
| MS.gene042068.t1 | MTR_0337s0040 | 71.538 | 260 | 34 | 2 | 1 | 259 | 1 | 221 | 3.48e-123 | 368 |
| MS.gene042068.t1 | MTR_3g008240 | 83.251 | 203 | 33 | 1 | 1 | 202 | 1 | 203 | 6.24e-117 | 351 |
| MS.gene042068.t1 | MTR_4g040430 | 82.673 | 202 | 31 | 1 | 1 | 202 | 1 | 198 | 2.11e-116 | 350 |
| MS.gene042068.t1 | MTR_0337s0060 | 59.494 | 316 | 28 | 4 | 447 | 759 | 21 | 239 | 1.59e-110 | 336 |
| MS.gene042068.t1 | MTR_5g071590 | 73.333 | 180 | 35 | 2 | 1 | 167 | 1 | 180 | 1.86e-89 | 279 |
| MS.gene042068.t1 | MTR_1g055240 | 86.620 | 142 | 19 | 0 | 91 | 232 | 3 | 144 | 4.42e-86 | 269 |
| MS.gene042068.t1 | MTR_0019s0290 | 80.921 | 152 | 29 | 0 | 82 | 233 | 9 | 160 | 2.30e-85 | 267 |
| MS.gene042068.t1 | MTR_3g028680 | 80.795 | 151 | 26 | 1 | 618 | 765 | 1 | 151 | 4.34e-80 | 254 |
| MS.gene042068.t1 | MTR_2g067090 | 78.378 | 148 | 29 | 1 | 621 | 765 | 99 | 246 | 3.01e-71 | 235 |
| MS.gene042068.t1 | MTR_4g133495 | 64.088 | 181 | 39 | 2 | 576 | 753 | 88 | 245 | 2.58e-68 | 227 |
| MS.gene042068.t1 | MTR_4g133340 | 64.088 | 181 | 39 | 2 | 576 | 753 | 88 | 245 | 2.58e-68 | 227 |
| MS.gene042068.t1 | MTR_1281s0010 | 80.734 | 109 | 21 | 0 | 19 | 127 | 1 | 109 | 2.48e-56 | 188 |
| MS.gene042068.t1 | MTR_6g051425 | 31.761 | 318 | 186 | 6 | 40 | 341 | 22 | 324 | 4.81e-38 | 145 |
| MS.gene042068.t1 | MTR_4g008820 | 70.000 | 100 | 29 | 1 | 1 | 99 | 125 | 224 | 1.51e-31 | 131 |
| MS.gene042068.t1 | MTR_8g046060 | 77.273 | 88 | 11 | 2 | 1 | 79 | 91 | 178 | 3.73e-31 | 122 |
| MS.gene042068.t1 | MTR_1g070355 | 26.543 | 324 | 217 | 6 | 41 | 362 | 80 | 384 | 7.98e-20 | 94.4 |
| MS.gene042068.t1 | MTR_2g067130 | 62.162 | 74 | 22 | 2 | 695 | 765 | 46 | 116 | 2.37e-18 | 83.2 |
| MS.gene042068.t1 | MTR_0402s0040 | 25.946 | 185 | 118 | 4 | 49 | 233 | 40 | 205 | 5.59e-15 | 79.0 |
| MS.gene042068.t1 | MTR_0337s0050 | 75.000 | 36 | 9 | 0 | 259 | 294 | 14 | 49 | 1.70e-13 | 66.6 |
| MS.gene042068.t1 | MTR_4g035820 | 22.069 | 290 | 193 | 7 | 17 | 299 | 61 | 324 | 1.69e-12 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042068.t1 | AT4G38180 | 27.769 | 641 | 383 | 13 | 32 | 665 | 70 | 637 | 1.31e-70 | 247 |
| MS.gene042068.t1 | AT4G15090 | 24.827 | 721 | 448 | 16 | 50 | 753 | 66 | 709 | 8.40e-61 | 220 |
| MS.gene042068.t1 | AT4G15090 | 24.827 | 721 | 448 | 16 | 50 | 753 | 66 | 709 | 8.40e-61 | 220 |
| MS.gene042068.t1 | AT4G15090 | 24.827 | 721 | 448 | 16 | 50 | 753 | 66 | 709 | 8.40e-61 | 220 |
| MS.gene042068.t1 | AT4G15090 | 24.827 | 721 | 448 | 16 | 50 | 753 | 66 | 709 | 8.40e-61 | 220 |
| MS.gene042068.t1 | AT4G15090 | 24.827 | 721 | 448 | 16 | 50 | 753 | 66 | 709 | 8.40e-61 | 220 |
| MS.gene042068.t1 | AT2G27110 | 26.633 | 597 | 364 | 15 | 127 | 719 | 108 | 634 | 1.75e-54 | 202 |
| MS.gene042068.t1 | AT2G27110 | 26.633 | 597 | 364 | 15 | 127 | 719 | 108 | 634 | 1.75e-54 | 202 |
| MS.gene042068.t1 | AT2G27110 | 27.122 | 542 | 324 | 13 | 180 | 719 | 17 | 489 | 1.20e-53 | 198 |
| MS.gene042068.t1 | AT3G06250 | 25.118 | 633 | 351 | 16 | 34 | 661 | 189 | 703 | 3.09e-51 | 192 |
| MS.gene042068.t1 | AT3G06250 | 25.118 | 633 | 351 | 16 | 34 | 661 | 189 | 703 | 3.09e-51 | 192 |
| MS.gene042068.t1 | AT3G06250 | 25.118 | 633 | 351 | 16 | 34 | 661 | 189 | 703 | 3.09e-51 | 192 |
| MS.gene042068.t1 | AT1G76320 | 24.815 | 677 | 413 | 19 | 50 | 720 | 12 | 598 | 2.98e-50 | 187 |
| MS.gene042068.t1 | AT1G76320 | 24.815 | 677 | 413 | 19 | 50 | 720 | 12 | 598 | 8.22e-50 | 187 |
| MS.gene042068.t1 | AT1G76320 | 24.815 | 677 | 413 | 19 | 50 | 720 | 12 | 598 | 9.23e-50 | 187 |
| MS.gene042068.t1 | AT1G76320 | 24.815 | 677 | 413 | 19 | 50 | 720 | 12 | 598 | 9.23e-50 | 187 |
| MS.gene042068.t1 | AT3G22170 | 23.167 | 682 | 426 | 16 | 34 | 708 | 69 | 659 | 7.46e-49 | 186 |
| MS.gene042068.t1 | AT3G22170 | 23.167 | 682 | 426 | 16 | 34 | 708 | 69 | 659 | 7.46e-49 | 186 |
| MS.gene042068.t1 | AT5G18960 | 24.575 | 647 | 360 | 18 | 24 | 661 | 200 | 727 | 2.30e-45 | 174 |
| MS.gene042068.t1 | AT5G18960 | 24.575 | 647 | 360 | 18 | 24 | 661 | 200 | 727 | 2.30e-45 | 174 |
| MS.gene042068.t1 | AT4G38170 | 25.290 | 431 | 264 | 11 | 235 | 662 | 24 | 399 | 5.90e-44 | 167 |
| MS.gene042068.t1 | AT1G10240 | 24.880 | 623 | 376 | 19 | 49 | 659 | 62 | 604 | 3.59e-42 | 164 |
| MS.gene042068.t1 | AT1G10240 | 24.880 | 623 | 376 | 19 | 49 | 659 | 62 | 604 | 3.59e-42 | 164 |
| MS.gene042068.t1 | AT5G28530 | 24.100 | 639 | 388 | 17 | 40 | 660 | 60 | 619 | 9.48e-42 | 163 |
| MS.gene042068.t1 | AT5G28530 | 23.944 | 639 | 385 | 18 | 40 | 660 | 60 | 615 | 6.15e-41 | 160 |
| MS.gene042068.t1 | AT5G28530 | 23.944 | 639 | 385 | 18 | 40 | 660 | 60 | 615 | 6.15e-41 | 160 |
| MS.gene042068.t1 | AT2G32250 | 24.295 | 745 | 427 | 22 | 4 | 743 | 10 | 622 | 9.88e-41 | 160 |
| MS.gene042068.t1 | AT2G32250 | 24.295 | 745 | 427 | 22 | 4 | 743 | 10 | 622 | 1.24e-40 | 160 |
| MS.gene042068.t1 | AT2G32250 | 24.295 | 745 | 427 | 22 | 4 | 743 | 10 | 622 | 1.24e-40 | 160 |
| MS.gene042068.t1 | AT2G32250 | 24.295 | 745 | 427 | 22 | 4 | 743 | 10 | 622 | 1.60e-40 | 160 |
| MS.gene042068.t1 | AT2G32250 | 24.295 | 745 | 427 | 22 | 4 | 743 | 10 | 622 | 1.60e-40 | 160 |
| MS.gene042068.t1 | AT2G32250 | 24.295 | 745 | 427 | 22 | 4 | 743 | 10 | 622 | 1.60e-40 | 160 |
| MS.gene042068.t1 | AT2G32250 | 24.320 | 699 | 395 | 20 | 50 | 743 | 12 | 581 | 7.59e-40 | 158 |
| MS.gene042068.t1 | AT2G32250 | 24.320 | 699 | 395 | 20 | 50 | 743 | 12 | 581 | 7.71e-40 | 157 |
| MS.gene042068.t1 | AT1G80010 | 24.606 | 634 | 393 | 22 | 41 | 662 | 101 | 661 | 2.25e-37 | 150 |
| MS.gene042068.t1 | AT1G52520 | 21.870 | 631 | 401 | 17 | 41 | 662 | 91 | 638 | 2.49e-33 | 137 |
| MS.gene042068.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 106 | 369 | 1.51e-27 | 119 |
| MS.gene042068.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 438 | 558 | 6.56e-13 | 72.8 |
| MS.gene042068.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 1.59e-27 | 119 |
| MS.gene042068.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 6.86e-13 | 72.8 |
| MS.gene042068.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 1.83e-27 | 119 |
| MS.gene042068.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 6.64e-13 | 72.8 |
| MS.gene042068.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 1.83e-27 | 119 |
| MS.gene042068.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 6.64e-13 | 72.8 |
| MS.gene042068.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 177 | 440 | 1.98e-27 | 119 |
| MS.gene042068.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 509 | 629 | 7.77e-13 | 72.8 |
| MS.gene042068.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 2.05e-27 | 119 |
| MS.gene042068.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 6.82e-13 | 72.8 |
| MS.gene042068.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 2.05e-27 | 119 |
| MS.gene042068.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 6.82e-13 | 72.8 |
| MS.gene042068.t1 | AT5G28530 | 21.781 | 629 | 352 | 20 | 40 | 660 | 60 | 556 | 1.57e-22 | 103 |
| MS.gene042068.t1 | AT5G28530 | 21.622 | 629 | 349 | 21 | 40 | 660 | 60 | 552 | 1.01e-21 | 100 |
Find 114 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATGCTGAGTTGGACTTTA+AGG | 0.133287 | 8.3:-413373 | MS.gene042068:CDS |
| TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 8.3:-413682 | MS.gene042068:CDS |
| AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 8.3:+412547 | None:intergenic |
| CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 8.3:-413415 | MS.gene042068:CDS |
| CAACAAGATTATGCTCTATT+TGG | 0.198611 | 8.3:-414466 | MS.gene042068:CDS |
| TTCATTTCAGCTGCCTTTCT+TGG | 0.201003 | 8.3:-413963 | MS.gene042068:intron |
| CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 8.3:-413930 | MS.gene042068:CDS |
| TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 8.3:+413836 | None:intergenic |
| TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 8.3:+412553 | None:intergenic |
| AATCAGATTTCGACTACAAT+TGG | 0.318540 | 8.3:-413641 | MS.gene042068:CDS |
| TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 8.3:-412701 | MS.gene042068:CDS |
| GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 8.3:+414416 | None:intergenic |
| GGTTTCGAATGTTGATGTTT+TGG | 0.354913 | 8.3:-413118 | MS.gene042068:CDS |
| ACTAGCCTGGTCTGTGTATA+TGG | 0.360230 | 8.3:+413818 | None:intergenic |
| TATGCATTGGTCTTCAGTTT+GGG | 0.370760 | 8.3:-413541 | MS.gene042068:CDS |
| CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 8.3:-412709 | MS.gene042068:CDS |
| AACAATAAATATCGGCCATT+AGG | 0.388497 | 8.3:-414409 | MS.gene042068:intron |
| ACCGAACAAACAATAAATAT+CGG | 0.389395 | 8.3:-414417 | MS.gene042068:CDS |
| GTATGCATTGGTCTTCAGTT+TGG | 0.392120 | 8.3:-413542 | MS.gene042068:CDS |
| GTCTTTAGTGCCAACATTCA+TGG | 0.395146 | 8.3:+412825 | None:intergenic |
| TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 8.3:+414946 | None:intergenic |
| AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 8.3:-412561 | MS.gene042068:intron |
| TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 8.3:+412571 | None:intergenic |
| TTCCTTCAAATACTATTATG+AGG | 0.399583 | 8.3:-413241 | MS.gene042068:CDS |
| GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 8.3:-412676 | MS.gene042068:CDS |
| TAAAGAATCATGGAAGTCTT+TGG | 0.408500 | 8.3:-415175 | MS.gene042068:CDS |
| CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 8.3:-412993 | MS.gene042068:CDS |
| GATTATGATCTTCAAACCTT+GGG | 0.413114 | 8.3:+413070 | None:intergenic |
| ATAACACTGGATTCTCTGTT+AGG | 0.417808 | 8.3:-415104 | MS.gene042068:CDS |
| GGGTTGTCACAGTCGACATT+AGG | 0.419786 | 8.3:-413035 | MS.gene042068:CDS |
| CGATTATGATCTTCAAACCT+TGG | 0.425681 | 8.3:+413069 | None:intergenic |
| CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 8.3:-414769 | MS.gene042068:CDS |
| AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 8.3:-414887 | MS.gene042068:CDS |
| TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 8.3:+413825 | None:intergenic |
| GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 8.3:-414904 | MS.gene042068:CDS |
| CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 8.3:+412892 | None:intergenic |
| CGTTATGCTTGTAACAAAGA+AGG | 0.449439 | 8.3:-415021 | MS.gene042068:CDS |
| GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 8.3:-414739 | MS.gene042068:CDS |
| ATCTGAGAGTGGACAATTGA+CGG | 0.452529 | 8.3:-415250 | MS.gene042068:CDS |
| TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 8.3:-413751 | MS.gene042068:CDS |
| GGCCTACTTCGGACTTTAAG+TGG | 0.458978 | 8.3:-413587 | MS.gene042068:CDS |
| ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 8.3:-412992 | MS.gene042068:CDS |
| GAAGCGATGGGTCAAGGAGC+TGG | 0.466940 | 8.3:-414694 | MS.gene042068:CDS |
| ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 8.3:-415055 | MS.gene042068:CDS |
| CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 8.3:+413239 | None:intergenic |
| TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 8.3:+414910 | None:intergenic |
| TTTAATTATGCATATAACAC+TGG | 0.485542 | 8.3:-415117 | MS.gene042068:CDS |
| TCTAATGACAACTCGTCAAA+AGG | 0.488137 | 8.3:-414626 | MS.gene042068:CDS |
| CTCAAGTAGCACAAATGCTC+TGG | 0.489977 | 8.3:+414799 | None:intergenic |
| CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 8.3:-415061 | MS.gene042068:CDS |
| TATGAGGAGGACACAACAAA+AGG | 0.490908 | 8.3:-413225 | MS.gene042068:CDS |
| ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 8.3:+413950 | None:intergenic |
| CTGTCTATGAACCATCTGTT+GGG | 0.491412 | 8.3:-412600 | MS.gene042068:CDS |
| ATCAGATTTCGACTACAATT+GGG | 0.491708 | 8.3:-413640 | MS.gene042068:CDS |
| CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 8.3:-414613 | MS.gene042068:CDS |
| ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 8.3:-413401 | MS.gene042068:CDS |
| GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 8.3:+413321 | None:intergenic |
| TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 8.3:+414521 | None:intergenic |
| AAATGCTCTGGTTTATGTAA+TGG | 0.504865 | 8.3:+414811 | None:intergenic |
| CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 8.3:-413554 | MS.gene042068:CDS |
| ATCATAATCGACTTGATGAA+AGG | 0.507955 | 8.3:-413056 | MS.gene042068:CDS |
| TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 8.3:+414655 | None:intergenic |
| GAGGGATAATCATGCTGAGT+TGG | 0.508852 | 8.3:-413382 | MS.gene042068:CDS |
| ATTGGTCTTCAGTTTGGGTG+AGG | 0.509410 | 8.3:-413536 | MS.gene042068:CDS |
| TGTCTATAAGATATATAAGT+GGG | 0.514682 | 8.3:-414851 | MS.gene042068:CDS |
| GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 8.3:+413076 | None:intergenic |
| TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 8.3:+413433 | None:intergenic |
| TCATAATCGACTTGATGAAA+GGG | 0.526860 | 8.3:-413055 | MS.gene042068:CDS |
| CATAATAGTATTTGAAGGAA+AGG | 0.529686 | 8.3:+413244 | None:intergenic |
| ACTTCAACAACGCACTAGCC+TGG | 0.534735 | 8.3:+413805 | None:intergenic |
| GAGAACATCTTATGAAGCGA+TGG | 0.538371 | 8.3:-414707 | MS.gene042068:CDS |
| TAACAAAGAAGGTTTCAAGA+AGG | 0.538422 | 8.3:-415010 | MS.gene042068:CDS |
| AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 8.3:+413438 | None:intergenic |
| ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 8.3:-413224 | MS.gene042068:CDS |
| AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 8.3:-415009 | MS.gene042068:CDS |
| TCTTATGAAGCGATGGGTCA+AGG | 0.545849 | 8.3:-414700 | MS.gene042068:CDS |
| CATTTAGTGATAAAGAATCA+TGG | 0.546005 | 8.3:-415185 | MS.gene042068:CDS |
| CTGAAATCCACCATGAATGT+TGG | 0.557140 | 8.3:-412835 | MS.gene042068:CDS |
| AATGAAGCTCTCTCGAAACC+AGG | 0.565261 | 8.3:-414559 | MS.gene042068:CDS |
| TGAAAATTCAGTTATTGATG+CGG | 0.565546 | 8.3:-415226 | MS.gene042068:CDS |
| GCTGTCTATGAACCATCTGT+TGG | 0.568181 | 8.3:-412601 | MS.gene042068:CDS |
| TACACGTGTTTGCGCAGATG+CGG | 0.571672 | 8.3:-412749 | MS.gene042068:CDS |
| ATGTCTATAAGATATATAAG+TGG | 0.572287 | 8.3:-414852 | MS.gene042068:CDS |
| GGGTCAAGGAGCTGGAGGCA+CGG | 0.578030 | 8.3:-414686 | MS.gene042068:CDS |
| GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 8.3:+413320 | None:intergenic |
| TTTGGTGCAGTCCCAACAGA+TGG | 0.581566 | 8.3:+412589 | None:intergenic |
| TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 8.3:+413299 | None:intergenic |
| ATATTAACTTCATCTGAGAG+TGG | 0.588105 | 8.3:-415261 | MS.gene042068:CDS |
| TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 8.3:-412708 | MS.gene042068:CDS |
| ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 8.3:-412713 | MS.gene042068:CDS |
| TTGAAGAAAACCTTTCCCCA+AGG | 0.594796 | 8.3:-413086 | MS.gene042068:CDS |
| TGAAGACTTAGAAGGCGTAA+CGG | 0.598405 | 8.3:+412633 | None:intergenic |
| GACAACTCGTCAAAAGGAGA+TGG | 0.599038 | 8.3:-414620 | MS.gene042068:CDS |
| TTGATATCGTTGTGCTTGAG+TGG | 0.601464 | 8.3:+412801 | None:intergenic |
| AACTCGTCAAAAGGAGATGG+TGG | 0.603142 | 8.3:-414617 | MS.gene042068:CDS |
| ACGTGTTTGCGCAGATGCGG+AGG | 0.605934 | 8.3:-412746 | MS.gene042068:CDS |
| ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 8.3:-413323 | MS.gene042068:CDS |
| CTTCAAATACTATTATGAGG+AGG | 0.607664 | 8.3:-413238 | MS.gene042068:CDS |
| AGAACTGGACTGTCACATGT+TGG | 0.620791 | 8.3:+414961 | None:intergenic |
| AGAACATCTTATGAAGCGAT+GGG | 0.621635 | 8.3:-414706 | MS.gene042068:CDS |
| AGCCACTTAAAGTCCGAAGT+AGG | 0.621799 | 8.3:+413585 | None:intergenic |
| ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 8.3:+413071 | None:intergenic |
| GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 8.3:-413750 | MS.gene042068:CDS |
| TTTAGTGCCAACATTCATGG+TGG | 0.641441 | 8.3:+412828 | None:intergenic |
| CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 8.3:-413400 | MS.gene042068:CDS |
| GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 8.3:+412850 | None:intergenic |
| TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 8.3:+413279 | None:intergenic |
| GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 8.3:-412724 | MS.gene042068:CDS |
| CATGTCGACATAAGAAACCC+CGG | 0.663279 | 8.3:+412974 | None:intergenic |
| TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 8.3:-412991 | MS.gene042068:CDS |
| GCGATGGGTCAAGGAGCTGG+AGG | 0.680061 | 8.3:-414691 | MS.gene042068:CDS |
| ATGTTGATAATGATAATGAG+AGG | 0.683310 | 8.3:-413140 | MS.gene042068:CDS |
| TCAAACCATATACACAGACC+AGG | 0.683597 | 8.3:-413823 | MS.gene042068:CDS |
| TGTTGATAATGATAATGAGA+GGG | 0.689129 | 8.3:-413139 | MS.gene042068:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTCTATAAGATATATAAG+TGG | - | chr8.3:412863-412882 | MS.gene042068:CDS | 20.0% |
| !! | CAATTCACAAAATAAGAAAT+CGG | - | chr8.3:412654-412673 | MS.gene042068:CDS | 20.0% |
| !! | TGTCTATAAGATATATAAGT+GGG | - | chr8.3:412864-412883 | MS.gene042068:CDS | 20.0% |
| !! | TTTAATTATGCATATAACAC+TGG | - | chr8.3:412598-412617 | MS.gene042068:CDS | 20.0% |
| !!! | AATTTAATGTTCTGGTTTAT+GGG | - | chr8.3:413481-413500 | MS.gene042068:CDS | 20.0% |
| !!! | ATGATGAAAAACTGTTTTAA+TGG | - | chr8.3:414103-414122 | MS.gene042068:intron | 20.0% |
| !!! | TGAATGTTTATATTGATTGA+AGG | - | chr8.3:413453-413472 | MS.gene042068:CDS | 20.0% |
| ! | AAAACACCTTGAAAAACATT+CGG | + | chr8.3:413941-413960 | None:intergenic | 25.0% |
| ! | ACAAAATAAGAAATCGGATA+AGG | - | chr8.3:412660-412679 | MS.gene042068:CDS | 25.0% |
| ! | ACCGAACAAACAATAAATAT+CGG | - | chr8.3:413298-413317 | MS.gene042068:CDS | 25.0% |
| ! | AGTACAAAATACTAACCTAA+TGG | + | chr8.3:413324-413343 | None:intergenic | 25.0% |
| ! | CATAATAGTATTTGAAGGAA+AGG | + | chr8.3:414474-414493 | None:intergenic | 25.0% |
| ! | CATTTAGTGATAAAGAATCA+TGG | - | chr8.3:412530-412549 | MS.gene042068:intron | 25.0% |
| ! | CTTTAGTCATTTCAACATTA+TGG | - | chr8.3:414300-414319 | MS.gene042068:intron | 25.0% |
| ! | TGAAAATTCAGTTATTGATG+CGG | - | chr8.3:412489-412508 | MS.gene042068:intron | 25.0% |
| ! | TGAAATTTGAATGAATGTTC+TGG | - | chr8.3:413371-413390 | MS.gene042068:CDS | 25.0% |
| ! | TGAATAAATGAAAAGCAAGA+TGG | + | chr8.3:414439-414458 | None:intergenic | 25.0% |
| ! | TTCCTTCAAATACTATTATG+AGG | - | chr8.3:414474-414493 | MS.gene042068:CDS | 25.0% |
| ! | TTTCGATGAGTTAACTAATT+TGG | - | chr8.3:414033-414052 | MS.gene042068:intron | 25.0% |
| !! | AGGTTTAGAATTTAATGTTC+TGG | - | chr8.3:413473-413492 | MS.gene042068:CDS | 25.0% |
| !! | CAAAGTTTTCACAATTGAAA+AGG | - | chr8.3:414534-414553 | MS.gene042068:CDS | 25.0% |
| !! | TGTTGTATTTTGTTCTGATT+TGG | - | chr8.3:413729-413748 | MS.gene042068:CDS | 25.0% |
| !!! | ATGTTGATAATGATAATGAG+AGG | - | chr8.3:414575-414594 | MS.gene042068:CDS | 25.0% |
| !!! | CTTATTTTGTGAATTGTTCT+TGG | + | chr8.3:412650-412669 | None:intergenic | 25.0% |
| !!! | GAATTTAATGTTCTGGTTTA+TGG | - | chr8.3:413480-413499 | MS.gene042068:CDS | 25.0% |
| !!! | GCTTTAATAAATTCTAAAGC+TGG | - | chr8.3:412976-412995 | MS.gene042068:CDS | 25.0% |
| !!! | TGAAAAACTGTTTTAATGGA+AGG | - | chr8.3:414107-414126 | MS.gene042068:intron | 25.0% |
| !!! | TGTTGATAATGATAATGAGA+GGG | - | chr8.3:414576-414595 | MS.gene042068:CDS | 25.0% |
| AAACACATATGATCTTTCCA+TGG | + | chr8.3:413544-413563 | None:intergenic | 30.0% | |
| AACAAAGAAGGTTTCAAGAA+GGG | - | chr8.3:412706-412725 | MS.gene042068:CDS | 30.0% | |
| AACAATAAATATCGGCCATT+AGG | - | chr8.3:413306-413325 | MS.gene042068:CDS | 30.0% | |
| AAGAAAGACCAAATCCAATT+AGG | - | chr8.3:415154-415173 | MS.gene042068:CDS | 30.0% | |
| AATCAGATTTCGACTACAAT+TGG | - | chr8.3:414074-414093 | MS.gene042068:intron | 30.0% | |
| ATATTAACTTCATCTGAGAG+TGG | - | chr8.3:412454-412473 | MS.gene042068:intron | 30.0% | |
| ATCAGATTTCGACTACAATT+GGG | - | chr8.3:414075-414094 | MS.gene042068:intron | 30.0% | |
| ATGATTGTCAAAACCAAGAA+AGG | + | chr8.3:413768-413787 | None:intergenic | 30.0% | |
| ATTATGATCTTCAAACCTTG+GGG | + | chr8.3:414647-414666 | None:intergenic | 30.0% | |
| CAACAAGATTATGCTCTATT+TGG | - | chr8.3:413249-413268 | MS.gene042068:CDS | 30.0% | |
| CTCCTCATAATAGTATTTGA+AGG | + | chr8.3:414479-414498 | None:intergenic | 30.0% | |
| CTGGTATATGTGTGTTAATT+TGG | - | chr8.3:413410-413429 | MS.gene042068:CDS | 30.0% | |
| CTTCAAATACTATTATGAGG+AGG | - | chr8.3:414477-414496 | MS.gene042068:CDS | 30.0% | |
| GAGAATGCAAAGAAAAATCT+CGG | - | chr8.3:413989-414008 | MS.gene042068:intron | 30.0% | |
| GATTATGATCTTCAAACCTT+GGG | + | chr8.3:414648-414667 | None:intergenic | 30.0% | |
| GCCGATATTTATTGTTTGTT+CGG | + | chr8.3:413302-413321 | None:intergenic | 30.0% | |
| TAAAGAAAAACCAGAGGAAA+GGG | - | chr8.3:412795-412814 | MS.gene042068:CDS | 30.0% | |
| TAAAGAATCATGGAAGTCTT+TGG | - | chr8.3:412540-412559 | MS.gene042068:intron | 30.0% | |
| TAAAGAATCGAACAAGTGAA+TGG | + | chr8.3:414285-414304 | None:intergenic | 30.0% | |
| TAACAAAGAAGGTTTCAAGA+AGG | - | chr8.3:412705-412724 | MS.gene042068:CDS | 30.0% | |
| TGGATATCATAGTAAAAACC+TGG | + | chr8.3:413177-413196 | None:intergenic | 30.0% | |
| TGGTGTATACTTGTTTACTA+CGG | + | chr8.3:414419-414438 | None:intergenic | 30.0% | |
| TTCTTTGACCTAATTGGATT+TGG | + | chr8.3:415165-415184 | None:intergenic | 30.0% | |
| TTTAAGTCCGAAAATCGAAA+AGG | + | chr8.3:413063-413082 | None:intergenic | 30.0% | |
| TTTCTATTTACACAGCACAA+TGG | - | chr8.3:413688-413707 | MS.gene042068:CDS | 30.0% | |
| ! | AAATGCTCTGGTTTATGTAA+TGG | + | chr8.3:412907-412926 | None:intergenic | 30.0% |
| ! | AGCTGGAATATATTTGAAGT+TGG | - | chr8.3:412828-412847 | MS.gene042068:CDS | 30.0% |
| ! | GAATCTTCCTTTTCGATTTT+CGG | - | chr8.3:413053-413072 | MS.gene042068:CDS | 30.0% |
| ! | GCATCTGAAATATTTCTCAA+CGG | - | chr8.3:414991-415010 | MS.gene042068:CDS | 30.0% |
| ! | TATGGTTTGAGGTTTCTTAT+TGG | + | chr8.3:413882-413901 | None:intergenic | 30.0% |
| ! | TCAATTCCGAATGTTTTTCA+AGG | - | chr8.3:413932-413951 | MS.gene042068:CDS | 30.0% |
| ! | TGAGGCTTTAACAATTTAAG+CGG | - | chr8.3:415263-415282 | MS.gene042068:CDS | 30.0% |
| ! | TTTGGTCTTTCTTTGAACTT+TGG | + | chr8.3:415147-415166 | None:intergenic | 30.0% |
| !! | ACATGTTTTCAAGATTTTGG+AGG | - | chr8.3:414759-414778 | MS.gene042068:CDS | 30.0% |
| !! | ATCATAATCGACTTGATGAA+AGG | - | chr8.3:414659-414678 | MS.gene042068:CDS | 30.0% |
| !! | ATGTTCTGGTTTAGAATTGA+AGG | - | chr8.3:413385-413404 | MS.gene042068:CDS | 30.0% |
| !! | GAGGAGTTTCTTATTTCTAA+AGG | - | chr8.3:415039-415058 | MS.gene042068:CDS | 30.0% |
| !! | TCATAATCGACTTGATGAAA+GGG | - | chr8.3:414660-414679 | MS.gene042068:CDS | 30.0% |
| !! | TCGACATGTTTTCAAGATTT+TGG | - | chr8.3:414756-414775 | MS.gene042068:CDS | 30.0% |
| !!! | AAGACATAGCCAGTATTTTT+TGG | - | chr8.3:413211-413230 | MS.gene042068:CDS | 30.0% |
| !!! | AGACATAGCCAGTATTTTTT+GGG | - | chr8.3:413212-413231 | MS.gene042068:CDS | 30.0% |
| !!! | CTGCACAATATGTTTTAAAG+CGG | - | chr8.3:414824-414843 | MS.gene042068:CDS | 30.0% |
| !!! | GTTTTTCAAGGTGTTTTTCA+TGG | - | chr8.3:413944-413963 | MS.gene042068:CDS | 30.0% |
| ACATTATGGTTCAGAGAATG+AGG | - | chr8.3:414314-414333 | MS.gene042068:intron | 35.0% | |
| AGAACATCTTATGAAGCGAT+GGG | - | chr8.3:413009-413028 | MS.gene042068:CDS | 35.0% | |
| ATAACACTGGATTCTCTGTT+AGG | - | chr8.3:412611-412630 | MS.gene042068:CDS | 35.0% | |
| CATAAATTCCAAGGCAAGAT+AGG | + | chr8.3:413511-413530 | None:intergenic | 35.0% | |
| CATTATGGTTCAGAGAATGA+GGG | - | chr8.3:414315-414334 | MS.gene042068:intron | 35.0% | |
| CGAGAAGTAAATGAAGTTCA+AGG | - | chr8.3:412946-412965 | MS.gene042068:CDS | 35.0% | |
| CGATTATGATCTTCAAACCT+TGG | + | chr8.3:414649-414668 | None:intergenic | 35.0% | |
| CGTTATGCTTGTAACAAAGA+AGG | - | chr8.3:412694-412713 | MS.gene042068:CDS | 35.0% | |
| CTAAAGAAAAACCAGAGGAA+AGG | - | chr8.3:412794-412813 | MS.gene042068:CDS | 35.0% | |
| CTCATTCAAATCGTATGCAT+TGG | - | chr8.3:414161-414180 | MS.gene042068:intron | 35.0% | |
| GAAAGCTAAAGAAAAACCAG+AGG | - | chr8.3:412789-412808 | MS.gene042068:CDS | 35.0% | |
| GAAGCAAAAGAAAGATGATG+AGG | - | chr8.3:415245-415264 | MS.gene042068:CDS | 35.0% | |
| GACAGAAATTCCTTATAGCT+CGG | - | chr8.3:415220-415239 | MS.gene042068:CDS | 35.0% | |
| GTCTGCTTAATCCTAAAAAC+AGG | - | chr8.3:412731-412750 | MS.gene042068:CDS | 35.0% | |
| TCTAATGACAACTCGTCAAA+AGG | - | chr8.3:413089-413108 | MS.gene042068:CDS | 35.0% | |
| TGTACAGAGCATAAATTCCA+AGG | + | chr8.3:413520-413539 | None:intergenic | 35.0% | |
| TTCTCATACTCAACAAGAAC+TGG | + | chr8.3:412772-412791 | None:intergenic | 35.0% | |
| ! | CATCGTAAGAGTGTGTTATT+TGG | - | chr8.3:413785-413804 | MS.gene042068:CDS | 35.0% |
| ! | GAGGCTTTAACAATTTAAGC+GGG | - | chr8.3:415264-415283 | MS.gene042068:CDS | 35.0% |
| ! | GGTTTCGAATGTTGATGTTT+TGG | - | chr8.3:414597-414616 | MS.gene042068:CDS | 35.0% |
| ! | TCTTTCAATGCTTTTCTTCG+TGG | - | chr8.3:414244-414263 | MS.gene042068:intron | 35.0% |
| ! | TGGTTTAGAATTGAAGGTTC+TGG | - | chr8.3:413391-413410 | MS.gene042068:CDS | 35.0% |
| ! | TTTTAATGGAAGGCCTACTT+CGG | - | chr8.3:414117-414136 | MS.gene042068:intron | 35.0% |
| ! | TTTTTCATGGTCTTTGCTCA+TGG | - | chr8.3:413957-413976 | MS.gene042068:intron | 35.0% |
| !! | ACTGCTTTTGAAGACTTAGA+AGG | + | chr8.3:415093-415112 | None:intergenic | 35.0% |
| !! | CGCTTTAAAACATATTGTGC+AGG | + | chr8.3:414826-414845 | None:intergenic | 35.0% |
| !! | TATGCATTGGTCTTCAGTTT+GGG | - | chr8.3:414174-414193 | MS.gene042068:intron | 35.0% |
| !! | TTCAAGATTTTGGAGGTCTT+AGG | - | chr8.3:414766-414785 | MS.gene042068:CDS | 35.0% |
| !!! | AGACATCAGCTACTTTTGAT+TGG | - | chr8.3:413828-413847 | MS.gene042068:CDS | 35.0% |
| !!! | CACAATATGTTTTAAAGCGG+TGG | - | chr8.3:414827-414846 | MS.gene042068:CDS | 35.0% |
| AATCGAACAAGTGAATGGTC+TGG | + | chr8.3:414280-414299 | None:intergenic | 40.0% | |
| ACCTATGATCTTTGCATAGC+TGG | + | chr8.3:413638-413657 | None:intergenic | 40.0% | |
| AGTCGCTTCTTTGACCTAAT+TGG | + | chr8.3:415171-415190 | None:intergenic | 40.0% | |
| ATCTGAGAGTGGACAATTGA+CGG | - | chr8.3:412465-412484 | MS.gene042068:intron | 40.0% | |
| ATGAGGAGGACACAACAAAA+GGG | - | chr8.3:414491-414510 | MS.gene042068:CDS | 40.0% | |
| ATGTCGTATGTTTGAGAACC+GGG | - | chr8.3:414723-414742 | MS.gene042068:CDS | 40.0% | |
| ATTTATGCTCTGTACAGCCA+TGG | - | chr8.3:413524-413543 | MS.gene042068:CDS | 40.0% | |
| ATTTCTCAACGGTGTTCTTG+AGG | - | chr8.3:415002-415021 | MS.gene042068:CDS | 40.0% | |
| CATGTCGTATGTTTGAGAAC+CGG | - | chr8.3:414722-414741 | MS.gene042068:CDS | 40.0% | |
| CTGAAATCCACCATGAATGT+TGG | - | chr8.3:414880-414899 | MS.gene042068:CDS | 40.0% | |
| CTGTCTATGAACCATCTGTT+GGG | - | chr8.3:415115-415134 | MS.gene042068:CDS | 40.0% | |
| GAGAACATCTTATGAAGCGA+TGG | - | chr8.3:413008-413027 | MS.gene042068:CDS | 40.0% | |
| GATTTCAGCTTATCGACAGA+CGG | + | chr8.3:414868-414887 | None:intergenic | 40.0% | |
| GTCTTTAGTGCCAACATTCA+TGG | + | chr8.3:414893-414912 | None:intergenic | 40.0% | |
| TATGAGGAGGACACAACAAA+AGG | - | chr8.3:414490-414509 | MS.gene042068:CDS | 40.0% | |
| TCAAACCATATACACAGACC+AGG | - | chr8.3:413892-413911 | MS.gene042068:CDS | 40.0% | |
| TCCAGCTATGCAAAGATCAT+AGG | - | chr8.3:413634-413653 | MS.gene042068:CDS | 40.0% | |
| TCCATCTGCCCAAAAAATAC+TGG | + | chr8.3:413223-413242 | None:intergenic | 40.0% | |
| TGGTCTGTGTATATGGTTTG+AGG | + | chr8.3:413893-413912 | None:intergenic | 40.0% | |
| TTCATTTCAGCTGCCTTTCT+TGG | - | chr8.3:413752-413771 | MS.gene042068:CDS | 40.0% | |
| TTGAAGAAAACCTTTCCCCA+AGG | - | chr8.3:414629-414648 | MS.gene042068:CDS | 40.0% | |
| TTGATATCGTTGTGCTTGAG+TGG | + | chr8.3:414917-414936 | None:intergenic | 40.0% | |
| TTTAGTGCCAACATTCATGG+TGG | + | chr8.3:414890-414909 | None:intergenic | 40.0% | |
| TTTGCTTCTTCCGAGCTATA+AGG | + | chr8.3:415233-415252 | None:intergenic | 40.0% | |
| ! | TCATGCTGAGTTGGACTTTA+AGG | - | chr8.3:414342-414361 | MS.gene042068:intron | 40.0% |
| ! | TGAAGACTTAGAAGGCGTAA+CGG | + | chr8.3:415085-415104 | None:intergenic | 40.0% |
| !! | AAGATTTTGGAGGTCTTAGG+TGG | - | chr8.3:414769-414788 | MS.gene042068:CDS | 40.0% |
| !! | GTATGCATTGGTCTTCAGTT+TGG | - | chr8.3:414173-414192 | MS.gene042068:intron | 40.0% |
| !! | TCACATGTTGGCCTGTTTTT+AGG | + | chr8.3:412745-412764 | None:intergenic | 40.0% |
| AACTCGTCAAAAGGAGATGG+TGG | - | chr8.3:413098-413117 | MS.gene042068:CDS | 45.0% | |
| AATGAAGCTCTCTCGAAACC+AGG | - | chr8.3:413156-413175 | MS.gene042068:CDS | 45.0% | |
| AGAACTGGACTGTCACATGT+TGG | + | chr8.3:412757-412776 | None:intergenic | 45.0% | |
| AGCCACTTAAAGTCCGAAGT+AGG | + | chr8.3:414133-414152 | None:intergenic | 45.0% | |
| ATCCCAACAGTCAGCTTATG+CGG | - | chr8.3:414392-414411 | MS.gene042068:intron | 45.0% | |
| CATGTCGACATAAGAAACCC+CGG | + | chr8.3:414744-414763 | None:intergenic | 45.0% | |
| CTCAAGTAGCACAAATGCTC+TGG | + | chr8.3:412919-412938 | None:intergenic | 45.0% | |
| GAAAAACCAGAGGAAAGGGT+TGG | - | chr8.3:412799-412818 | MS.gene042068:CDS | 45.0% | |
| GACAACTCGTCAAAAGGAGA+TGG | - | chr8.3:413095-413114 | MS.gene042068:CDS | 45.0% | |
| GAGGGATAATCATGCTGAGT+TGG | - | chr8.3:414333-414352 | MS.gene042068:intron | 45.0% | |
| GATCTTCAAACCTTGGGGAA+AGG | + | chr8.3:414642-414661 | None:intergenic | 45.0% | |
| GCTGTCTATGAACCATCTGT+TGG | - | chr8.3:415114-415133 | MS.gene042068:CDS | 45.0% | |
| TCTTATGAAGCGATGGGTCA+AGG | - | chr8.3:413015-413034 | MS.gene042068:CDS | 45.0% | |
| TGTCGTATGTTTGAGAACCG+GGG | - | chr8.3:414724-414743 | MS.gene042068:CDS | 45.0% | |
| TGTCTTCTGCAGCATCAACT+TGG | + | chr8.3:413197-413216 | None:intergenic | 45.0% | |
| TGTTCTTGAGGCAGGGAAAA+AGG | - | chr8.3:415014-415033 | MS.gene042068:CDS | 45.0% | |
| TTACAACCAACCCTTTCCTC+TGG | + | chr8.3:412808-412827 | None:intergenic | 45.0% | |
| ! | ACTAGCCTGGTCTGTGTATA+TGG | + | chr8.3:413900-413919 | None:intergenic | 45.0% |
| ! | GTGAGGTCACATTTTACAGC+TGG | - | chr8.3:414196-414215 | MS.gene042068:intron | 45.0% |
| !! | ATTGGTCTTCAGTTTGGGTG+AGG | - | chr8.3:414179-414198 | MS.gene042068:intron | 45.0% |
| !! | GAAAGGGTTGGTTGTAAAGC+TGG | - | chr8.3:412811-412830 | MS.gene042068:CDS | 45.0% |
| !!! | GCCAGTATTTTTTGGGCAGA+TGG | - | chr8.3:413219-413238 | MS.gene042068:CDS | 45.0% |
| ACTTCAACAACGCACTAGCC+TGG | + | chr8.3:413913-413932 | None:intergenic | 50.0% | |
| GACCGCATAAGCTGACTGTT+GGG | + | chr8.3:414397-414416 | None:intergenic | 50.0% | |
| GGCCTACTTCGGACTTTAAG+TGG | - | chr8.3:414128-414147 | MS.gene042068:intron | 50.0% | |
| GGGTTGTCACAGTCGACATT+AGG | - | chr8.3:414680-414699 | MS.gene042068:CDS | 50.0% | |
| GGTCTTTGCTCATGGCACAT+GGG | - | chr8.3:413965-413984 | MS.gene042068:intron | 50.0% | |
| TACACGTGTTTGCGCAGATG+CGG | - | chr8.3:414966-414985 | MS.gene042068:CDS | 50.0% | |
| TCAACGGTGTTCTTGAGGCA+GGG | - | chr8.3:415007-415026 | MS.gene042068:CDS | 50.0% | |
| TGGGTGATCCTATCTTGCCT+TGG | - | chr8.3:413500-413519 | MS.gene042068:CDS | 50.0% | |
| TGGTCTTTGCTCATGGCACA+TGG | - | chr8.3:413964-413983 | MS.gene042068:intron | 50.0% | |
| ! | TTTGGTGCAGTCCCAACAGA+TGG | + | chr8.3:415129-415148 | None:intergenic | 50.0% |
| CTCAACGGTGTTCTTGAGGC+AGG | - | chr8.3:415006-415025 | MS.gene042068:CDS | 55.0% | |
| GGACCGCATAAGCTGACTGT+TGG | + | chr8.3:414398-414417 | None:intergenic | 55.0% | |
| TGAGGCAGGGAAAAAGGCAG+AGG | - | chr8.3:415020-415039 | MS.gene042068:CDS | 55.0% | |
| ! | CGTCAAAAGGAGATGGTGGC+TGG | - | chr8.3:413102-413121 | MS.gene042068:CDS | 55.0% |
| ACGTGTTTGCGCAGATGCGG+AGG | - | chr8.3:414969-414988 | MS.gene042068:CDS | 60.0% | |
| GAAGCGATGGGTCAAGGAGC+TGG | - | chr8.3:413021-413040 | MS.gene042068:CDS | 60.0% | |
| GCGATGGGTCAAGGAGCTGG+AGG | - | chr8.3:413024-413043 | MS.gene042068:CDS | 65.0% | |
| GGGTCAAGGAGCTGGAGGCA+CGG | - | chr8.3:413029-413048 | MS.gene042068:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 412445 | 415292 | 412445 | ID=MS.gene042068 |
| chr8.3 | mRNA | 412445 | 415292 | 412445 | ID=MS.gene042068.t1;Parent=MS.gene042068 |
| chr8.3 | exon | 414410 | 415292 | 414410 | ID=MS.gene042068.t1.exon1;Parent=MS.gene042068.t1 |
| chr8.3 | CDS | 414410 | 415292 | 414410 | ID=cds.MS.gene042068.t1;Parent=MS.gene042068.t1 |
| chr8.3 | exon | 412562 | 413975 | 412562 | ID=MS.gene042068.t1.exon2;Parent=MS.gene042068.t1 |
| chr8.3 | CDS | 412562 | 413975 | 412562 | ID=cds.MS.gene042068.t1;Parent=MS.gene042068.t1 |
| chr8.3 | exon | 412445 | 412454 | 412445 | ID=MS.gene042068.t1.exon3;Parent=MS.gene042068.t1 |
| chr8.3 | CDS | 412445 | 412454 | 412445 | ID=cds.MS.gene042068.t1;Parent=MS.gene042068.t1 |
| Gene Sequence |
| Protein sequence |
