Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042153.t1 | XP_003610485.1 | 96.4 | 140 | 5 | 0 | 1 | 140 | 1 | 140 | 4.20E-64 | 254.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042153.t1 | P0DKG3 | 54.5 | 112 | 40 | 1 | 40 | 140 | 296 | 407 | 8.1e-24 | 111.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042153.t1 | G7JKF5 | 96.4 | 140 | 5 | 0 | 1 | 140 | 1 | 140 | 3.0e-64 | 254.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene042153.t1 | TF | OFP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042153.t1 | MTR_4g132740 | 97.857 | 140 | 3 | 0 | 1 | 140 | 1 | 140 | 4.47e-99 | 282 |
| MS.gene042153.t1 | MTR_4g028930 | 50.000 | 62 | 31 | 0 | 79 | 140 | 312 | 373 | 1.09e-14 | 70.9 |
| MS.gene042153.t1 | MTR_7g072875 | 50.000 | 58 | 29 | 0 | 83 | 140 | 221 | 278 | 2.39e-13 | 66.6 |
| MS.gene042153.t1 | MTR_7g072630 | 50.000 | 58 | 29 | 0 | 83 | 140 | 283 | 340 | 4.43e-13 | 66.2 |
| MS.gene042153.t1 | MTR_5g075210 | 48.387 | 62 | 32 | 0 | 79 | 140 | 278 | 339 | 5.94e-13 | 65.9 |
| MS.gene042153.t1 | MTR_2g018030 | 41.538 | 65 | 33 | 1 | 83 | 147 | 279 | 338 | 5.22e-12 | 63.2 |
| MS.gene042153.t1 | MTR_8g087530 | 41.538 | 65 | 33 | 1 | 83 | 147 | 260 | 319 | 3.85e-11 | 60.5 |
| MS.gene042153.t1 | MTR_0907s0020 | 46.552 | 58 | 31 | 0 | 83 | 140 | 104 | 161 | 5.55e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042153.t1 | AT4G04025 | 53.642 | 151 | 56 | 3 | 4 | 140 | 22 | 172 | 2.94e-44 | 144 |
| MS.gene042153.t1 | AT1G06920 | 41.860 | 86 | 45 | 2 | 58 | 138 | 215 | 300 | 3.70e-13 | 66.2 |
| MS.gene042153.t1 | AT2G30400 | 48.387 | 62 | 28 | 1 | 79 | 140 | 254 | 311 | 1.02e-12 | 65.1 |
| MS.gene042153.t1 | AT5G58360 | 48.333 | 60 | 27 | 1 | 79 | 138 | 226 | 281 | 1.20e-12 | 64.7 |
| MS.gene042153.t1 | AT5G01840 | 48.148 | 54 | 28 | 0 | 87 | 140 | 204 | 257 | 1.86e-12 | 63.9 |
| MS.gene042153.t1 | AT4G18830 | 43.103 | 58 | 33 | 0 | 83 | 140 | 284 | 341 | 2.76e-12 | 63.9 |
Find 37 sgRNAs with CRISPR-Local
Find 125 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGGTGGTGGTGGGCGGCGC+TGG | 0.116126 | 8.3:-1316938 | MS.gene042153:CDS |
| CTAGACATGTAGAGAGAAAA+AGG | 0.217537 | 8.3:-1318428 | MS.gene042153:CDS |
| ATGATCCAAGAGAGGATTTC+AGG | 0.230726 | 8.3:-1318347 | MS.gene042153:CDS |
| AAGCTTCAGATCACGGTATT+GGG | 0.302120 | 8.3:-1316904 | MS.gene042153:CDS |
| GAAGATCTTTCGCATCTTGA+AGG | 0.366336 | 8.3:+1318292 | None:intergenic |
| GGCAGCGATGGAGGTGGTGG+TGG | 0.392221 | 8.3:-1316948 | MS.gene042153:CDS |
| AGGTGGTGGTGGGCGGCGCT+GGG | 0.397302 | 8.3:-1316937 | MS.gene042153:CDS |
| GAAGCTTCAGATCACGGTAT+TGG | 0.397894 | 8.3:-1316905 | MS.gene042153:CDS |
| GAGAGTTCTTCTTCTGTCTC+TGG | 0.413981 | 8.3:-1318531 | MS.gene042153:CDS |
| TGGTGGTGGGCGGCGCTGGG+AGG | 0.423641 | 8.3:-1316934 | MS.gene042153:CDS |
| AAATCTCAAGTATAAGACTA+TGG | 0.438492 | 8.3:+1318226 | None:intergenic |
| AAAAGGGAGAAGAGGAGAGA+AGG | 0.442296 | 8.3:-1318411 | MS.gene042153:CDS |
| GACTCCCTGAAATCCTCTCT+TGG | 0.457320 | 8.3:+1318342 | None:intergenic |
| AGGGCAGCGACCGGCAGCGA+TGG | 0.463654 | 8.3:-1316960 | MS.gene042153:CDS |
| GTTCTTCTTCTGTCTCTGGT+AGG | 0.472904 | 8.3:-1318527 | MS.gene042153:CDS |
| GGATTTCAGGGAGTCTATGA+TGG | 0.485788 | 8.3:-1318334 | MS.gene042153:CDS |
| ACCGGCAGCGATGGAGGTGG+TGG | 0.504290 | 8.3:-1316951 | MS.gene042153:CDS |
| CTATTATATGTCGATGAACT+CGG | 0.518436 | 8.3:-1318256 | MS.gene042153:CDS |
| TGATCCAAGAGAGGATTTCA+GGG | 0.524133 | 8.3:-1318346 | MS.gene042153:CDS |
| AGATCACGGTATTGGGGAAG+AGG | 0.528372 | 8.3:-1316897 | MS.gene042153:CDS |
| ACCACCACCTCCATCGCTGC+CGG | 0.533103 | 8.3:+1316950 | None:intergenic |
| GCGATGGAGGTGGTGGTGGG+CGG | 0.538292 | 8.3:-1316944 | MS.gene042153:CDS |
| GCAGCGATGGAGGTGGTGGT+GGG | 0.543200 | 8.3:-1316947 | MS.gene042153:CDS |
| AGAAGAGAAGCTTCAGATCA+CGG | 0.552780 | 8.3:-1316911 | MS.gene042153:CDS |
| GCAGCGACCGGCAGCGATGG+AGG | 0.566620 | 8.3:-1316957 | MS.gene042153:CDS |
| ATATAGTGTTTCTTCTTCAG+AGG | 0.569609 | 8.3:-1318559 | MS.gene042153:CDS |
| GTCAAGTCTCTCTTGCACCA+TGG | 0.576800 | 8.3:+1318476 | None:intergenic |
| GCGACCGGCAGCGATGGAGG+TGG | 0.582430 | 8.3:-1316954 | MS.gene042153:CDS |
| TAAACTGAAAGGGCAGCGAC+CGG | 0.594908 | 8.3:-1316969 | MS.gene042153:intron |
| AAAACAACAAAGAGGATGCA+AGG | 0.595456 | 8.3:-1318604 | MS.gene042153:CDS |
| AGCTTCAGATCACGGTATTG+GGG | 0.608716 | 8.3:-1316903 | MS.gene042153:CDS |
| AAAACCTCAAAACAACAAAG+AGG | 0.609556 | 8.3:-1318612 | MS.gene042153:CDS |
| TGTGCTAGTGTAGAAACAGA+AGG | 0.614020 | 8.3:+1318501 | None:intergenic |
| TTCTACACTAGCACATGCCA+TGG | 0.653332 | 8.3:-1318493 | MS.gene042153:CDS |
| GTGTTCTTATGATCCAAGAG+AGG | 0.658417 | 8.3:-1318355 | MS.gene042153:CDS |
| GTGCTAGTGTAGAAACAGAA+GGG | 0.663929 | 8.3:+1318502 | None:intergenic |
| TCTGTTGCTACTGCAACACA+AGG | 0.676898 | 8.3:+1318581 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTCAACATGTTTTTTTTTA+AGG | - | chr8.3:1317407-1317426 | MS.gene042153:intron | 15.0% |
| !! | AAAAAGATTCTAGTATTCTA+CGG | + | chr8.3:1317511-1317530 | None:intergenic | 20.0% |
| !! | AATTAAGCGTTTCTTAATTA+CGG | + | chr8.3:1317658-1317677 | None:intergenic | 20.0% |
| !! | AGAATTTATAATCAAGAGAA+AGG | - | chr8.3:1317918-1317937 | MS.gene042153:intron | 20.0% |
| !! | GAATTTATAATCAAGAGAAA+GGG | - | chr8.3:1317919-1317938 | MS.gene042153:intron | 20.0% |
| !! | TCTAAATTAATTTATGTGCA+AGG | + | chr8.3:1317800-1317819 | None:intergenic | 20.0% |
| !! | TGATATCATGATATGAATAT+GGG | - | chr8.3:1317868-1317887 | MS.gene042153:intron | 20.0% |
| !!! | TAGAATACTAGAATCTTTTT+TGG | - | chr8.3:1317511-1317530 | MS.gene042153:intron | 20.0% |
| !!! | TATTTGTTCAATAAAAGTAC+TGG | - | chr8.3:1318122-1318141 | MS.gene042153:intron | 20.0% |
| ! | AAATCTCAAGTATAAGACTA+TGG | + | chr8.3:1317286-1317305 | None:intergenic | 25.0% |
| ! | CTGATATCATGATATGAATA+TGG | - | chr8.3:1317867-1317886 | MS.gene042153:intron | 25.0% |
| ! | TCTTATCATGTAAATGTCAA+TGG | - | chr8.3:1317330-1317349 | MS.gene042153:intron | 25.0% |
| ! | TGTGGCAAAAAAATAATCAA+AGG | - | chr8.3:1318072-1318091 | MS.gene042153:intron | 25.0% |
| ! | TTATGTCAAGTAGTACATTA+TGG | - | chr8.3:1317986-1318005 | MS.gene042153:intron | 25.0% |
| !! | CAAGTTTTTCTCTTATCATT+TGG | + | chr8.3:1317058-1317077 | None:intergenic | 25.0% |
| !! | TATACTTGAGATTTTTCATG+AGG | - | chr8.3:1317292-1317311 | MS.gene042153:intron | 25.0% |
| !!! | AATACTAGAATCTTTTTTGG+TGG | - | chr8.3:1317514-1317533 | MS.gene042153:intron | 25.0% |
| !!! | ATTCAACAGTTTTTTTGCAT+TGG | - | chr8.3:1317430-1317449 | MS.gene042153:intron | 25.0% |
| AAAACCTCAAAACAACAAAG+AGG | - | chr8.3:1316897-1316916 | MS.gene042153:CDS | 30.0% | |
| ACATATATCCAGTAACAACA+GGG | + | chr8.3:1318206-1318225 | None:intergenic | 30.0% | |
| ATATAGTGTTTCTTCTTCAG+AGG | - | chr8.3:1316950-1316969 | MS.gene042153:CDS | 30.0% | |
| CTATTATATGTCGATGAACT+CGG | - | chr8.3:1317253-1317272 | MS.gene042153:intron | 30.0% | |
| TAGACATGTAGAGAGAAAAA+GGG | - | chr8.3:1317082-1317101 | MS.gene042153:intron | 30.0% | |
| TCTTGCATCCAAATACTAAA+TGG | + | chr8.3:1318050-1318069 | None:intergenic | 30.0% | |
| TGTTAGCTCCATTTAGTATT+TGG | - | chr8.3:1318039-1318058 | MS.gene042153:intron | 30.0% | |
| ! | CATTATGGTTTTTATGAGTC+TGG | - | chr8.3:1318001-1318020 | MS.gene042153:intron | 30.0% |
| !! | AGTATTTTGCTGCTTAACTA+GGG | + | chr8.3:1317570-1317589 | None:intergenic | 30.0% |
| !! | ATCGATGAAATTGTTTCTGA+AGG | - | chr8.3:1318431-1318450 | MS.gene042153:CDS | 30.0% |
| !! | TAGTATTTTGCTGCTTAACT+AGG | + | chr8.3:1317571-1317590 | None:intergenic | 30.0% |
| AAAACAACAAAGAGGATGCA+AGG | - | chr8.3:1316905-1316924 | MS.gene042153:CDS | 35.0% | |
| AAAGGAATATGGGAGAATGA+CGG | - | chr8.3:1318509-1318528 | MS.gene042153:CDS | 35.0% | |
| AAGATTCTAGTATTCTACGG+TGG | + | chr8.3:1317508-1317527 | None:intergenic | 35.0% | |
| ATCAAGAGAAAGGGATAGAA+TGG | - | chr8.3:1317928-1317947 | MS.gene042153:intron | 35.0% | |
| CATATATCCAGTAACAACAG+GGG | + | chr8.3:1318205-1318224 | None:intergenic | 35.0% | |
| CTAGACATGTAGAGAGAAAA+AGG | - | chr8.3:1317081-1317100 | MS.gene042153:intron | 35.0% | |
| GAAAATGTTCACATTTGTGC+AGG | + | chr8.3:1317383-1317402 | None:intergenic | 35.0% | |
| GACAATGCATAGTATATGCA+TGG | + | chr8.3:1317548-1317567 | None:intergenic | 35.0% | |
| GACATATATCCAGTAACAAC+AGG | + | chr8.3:1318207-1318226 | None:intergenic | 35.0% | |
| GTTTGTGACGAAAGGAATAT+GGG | - | chr8.3:1318499-1318518 | MS.gene042153:CDS | 35.0% | |
| TGTTTGTGACGAAAGGAATA+TGG | - | chr8.3:1318498-1318517 | MS.gene042153:CDS | 35.0% | |
| ! | ATGGATTTGTTTGTGACGAA+AGG | - | chr8.3:1318491-1318510 | MS.gene042153:CDS | 35.0% |
| !!! | TTTCTGGTTACTGTTTTCAG+CGG | - | chr8.3:1318466-1318485 | MS.gene042153:CDS | 35.0% |
| AAGCTTCAGATCACGGTATT+GGG | - | chr8.3:1318605-1318624 | MS.gene042153:CDS | 40.0% | |
| AGAAGAGAAGCTTCAGATCA+CGG | - | chr8.3:1318598-1318617 | MS.gene042153:CDS | 40.0% | |
| ATGATCCAAGAGAGGATTTC+AGG | - | chr8.3:1317162-1317181 | MS.gene042153:intron | 40.0% | |
| ATGATTGACTGAGAAAGCAG+CGG | + | chr8.3:1318304-1318323 | None:intergenic | 40.0% | |
| ATTATAGCACGCACAGAAAC+AGG | + | chr8.3:1317745-1317764 | None:intergenic | 40.0% | |
| CATGTCTATTTCCTTAGACG+TGG | + | chr8.3:1317831-1317850 | None:intergenic | 40.0% | |
| GAAGATCTTTCGCATCTTGA+AGG | + | chr8.3:1317220-1317239 | None:intergenic | 40.0% | |
| GGCGTTGTGATAAACTGAAA+GGG | - | chr8.3:1318530-1318549 | MS.gene042153:CDS | 40.0% | |
| GTATTTGGATGCAAGACATG+TGG | - | chr8.3:1318054-1318073 | MS.gene042153:intron | 40.0% | |
| GTGCTAGTGTAGAAACAGAA+GGG | + | chr8.3:1317010-1317029 | None:intergenic | 40.0% | |
| GTGTTCTTATGATCCAAGAG+AGG | - | chr8.3:1317154-1317173 | MS.gene042153:intron | 40.0% | |
| TAGAGAGAAAAAGGGAGAAG+AGG | - | chr8.3:1317090-1317109 | MS.gene042153:intron | 40.0% | |
| TGATCCAAGAGAGGATTTCA+GGG | - | chr8.3:1317163-1317182 | MS.gene042153:intron | 40.0% | |
| TGCATAGTATATGCATGGTC+CGG | + | chr8.3:1317543-1317562 | None:intergenic | 40.0% | |
| TGTGCTAGTGTAGAAACAGA+AGG | + | chr8.3:1317011-1317030 | None:intergenic | 40.0% | |
| TTTCTGTGCGTGCTATAATG+TGG | - | chr8.3:1317746-1317765 | MS.gene042153:intron | 40.0% | |
| !! | AAGGCGATGGATTTGTTTTC+TGG | - | chr8.3:1318450-1318469 | MS.gene042153:CDS | 40.0% |
| !! | GAAATTGTTTCTGAAGGCGA+TGG | - | chr8.3:1318437-1318456 | MS.gene042153:CDS | 40.0% |
| !!! | GAATCTTTTTTGGTGGTGAC+CGG | - | chr8.3:1317521-1317540 | MS.gene042153:intron | 40.0% |
| !!! | GCATCCTCTTTGTTGTTTTG+AGG | + | chr8.3:1316904-1316923 | None:intergenic | 40.0% |
| AAAAGGGAGAAGAGGAGAGA+AGG | - | chr8.3:1317098-1317117 | MS.gene042153:intron | 45.0% | |
| AATGAGGGGAAAGAGAAGAG+GGG | + | chr8.3:1318170-1318189 | None:intergenic | 45.0% | |
| AGCTTCAGATCACGGTATTG+GGG | - | chr8.3:1318606-1318625 | MS.gene042153:CDS | 45.0% | |
| ATCCAGTAACAACAGGGGAA+GGG | + | chr8.3:1318200-1318219 | None:intergenic | 45.0% | |
| CGGCGTTGTGATAAACTGAA+AGG | - | chr8.3:1318529-1318548 | MS.gene042153:CDS | 45.0% | |
| GAAGCTTCAGATCACGGTAT+TGG | - | chr8.3:1318604-1318623 | MS.gene042153:CDS | 45.0% | |
| GAATGAGGGGAAAGAGAAGA+GGG | + | chr8.3:1318171-1318190 | None:intergenic | 45.0% | |
| GAGAGTTCTTCTTCTGTCTC+TGG | - | chr8.3:1316978-1316997 | MS.gene042153:intron | 45.0% | |
| GGATTTCAGGGAGTCTATGA+TGG | - | chr8.3:1317175-1317194 | MS.gene042153:intron | 45.0% | |
| GTTCTTCTTCTGTCTCTGGT+AGG | - | chr8.3:1316982-1317001 | MS.gene042153:intron | 45.0% | |
| TATCCAGTAACAACAGGGGA+AGG | + | chr8.3:1318201-1318220 | None:intergenic | 45.0% | |
| TCTGTTGCTACTGCAACACA+AGG | + | chr8.3:1316931-1316950 | None:intergenic | 45.0% | |
| TTCTACACTAGCACATGCCA+TGG | - | chr8.3:1317016-1317035 | MS.gene042153:intron | 45.0% | |
| TTTCCTTAGACGTGGAAGCT+TGG | + | chr8.3:1317823-1317842 | None:intergenic | 45.0% | |
| ! | GTTACTGTTTTCAGCGGTGA+TGG | - | chr8.3:1318472-1318491 | MS.gene042153:CDS | 45.0% |
| !! | TATAATAAGAAATTATATTA+AGG | - | chr8.3:1317472-1317491 | MS.gene042153:intron | 5.0% |
| AGACCAAGCTTCCACGTCTA+AGG | - | chr8.3:1317817-1317836 | MS.gene042153:intron | 50.0% | |
| AGCACGCACAGAAACAGGAA+AGG | + | chr8.3:1317740-1317759 | None:intergenic | 50.0% | |
| CGAATGAGGGGAAAGAGAAG+AGG | + | chr8.3:1318172-1318191 | None:intergenic | 50.0% | |
| GAAGAGAGGAGAAAGAGGAG+AGG | + | chr8.3:1318238-1318257 | None:intergenic | 50.0% | |
| GACTCCCTGAAATCCTCTCT+TGG | + | chr8.3:1317170-1317189 | None:intergenic | 50.0% | |
| GAGGAGAAGAGAGGAGAAAG+AGG | + | chr8.3:1318243-1318262 | None:intergenic | 50.0% | |
| GTCAAGTCTCTCTTGCACCA+TGG | + | chr8.3:1317036-1317055 | None:intergenic | 50.0% | |
| TAAACTGAAAGGGCAGCGAC+CGG | - | chr8.3:1318540-1318559 | MS.gene042153:CDS | 50.0% | |
| TCCAGTAACAACAGGGGAAG+GGG | + | chr8.3:1318199-1318218 | None:intergenic | 50.0% | |
| ! | AGATCACGGTATTGGGGAAG+AGG | - | chr8.3:1318612-1318631 | MS.gene042153:CDS | 50.0% |
| !! | CAAACCCCAAGAGTGCTTCT+GGG | + | chr8.3:1317716-1317735 | None:intergenic | 50.0% |
| CAAGGTAAGCAGCGTGTGGA+AGG | + | chr8.3:1317782-1317801 | None:intergenic | 55.0% | |
| CCAGTAACAACAGGGGAAGG+GGG | + | chr8.3:1318198-1318217 | None:intergenic | 55.0% | |
| TGTGCAAGGTAAGCAGCGTG+TGG | + | chr8.3:1317786-1317805 | None:intergenic | 55.0% | |
| !! | CCAAACCCCAAGAGTGCTTC+TGG | + | chr8.3:1317717-1317736 | None:intergenic | 55.0% |
| !! | CCAGAAGCACTCTTGGGGTT+TGG | - | chr8.3:1317714-1317733 | MS.gene042153:intron | 55.0% |
| !! | CCATCCCAGAAGCACTCTTG+GGG | - | chr8.3:1317709-1317728 | MS.gene042153:intron | 55.0% |
| !! | CCCAAGAGTGCTTCTGGGAT+GGG | + | chr8.3:1317711-1317730 | None:intergenic | 55.0% |
| !! | CCCATCCCAGAAGCACTCTT+GGG | - | chr8.3:1317708-1317727 | MS.gene042153:intron | 55.0% |
| !! | TCCCATCCCAGAAGCACTCT+TGG | - | chr8.3:1317707-1317726 | MS.gene042153:intron | 55.0% |
| AAAGCAGCGGCAGACGACGT+AGG | + | chr8.3:1318291-1318310 | None:intergenic | 60.0% | |
| CCCCCTTCCCCTGTTGTTAC+TGG | - | chr8.3:1318195-1318214 | MS.gene042153:intron | 60.0% | |
| GACGACGTAGGAGGTGGTGA+CGG | + | chr8.3:1318279-1318298 | None:intergenic | 60.0% | |
| GGAAGGGGGAAGCGAATGAG+GGG | + | chr8.3:1318184-1318203 | None:intergenic | 60.0% | |
| GGGAAGGGGGAAGCGAATGA+GGG | + | chr8.3:1318185-1318204 | None:intergenic | 60.0% | |
| !! | ACGTAGGAGGTGGTGACGGT+GGG | + | chr8.3:1318275-1318294 | None:intergenic | 60.0% |
| !! | CCCCAAGAGTGCTTCTGGGA+TGG | + | chr8.3:1317712-1317731 | None:intergenic | 60.0% |
| ACCACCACCTCCATCGCTGC+CGG | + | chr8.3:1318562-1318581 | None:intergenic | 65.0% | |
| CGGCGATGGGAGGAGAAGAG+AGG | + | chr8.3:1318252-1318271 | None:intergenic | 65.0% | |
| GGGGAAGGGGGAAGCGAATG+AGG | + | chr8.3:1318186-1318205 | None:intergenic | 65.0% | |
| ! | GCAGCGATGGAGGTGGTGGT+GGG | - | chr8.3:1318562-1318581 | MS.gene042153:CDS | 65.0% |
| !! | GACGTAGGAGGTGGTGACGG+TGG | + | chr8.3:1318276-1318295 | None:intergenic | 65.0% |
| !! | TAGGAGGTGGTGACGGTGGG+CGG | + | chr8.3:1318272-1318291 | None:intergenic | 65.0% |
| ACCGGCAGCGATGGAGGTGG+TGG | - | chr8.3:1318558-1318577 | MS.gene042153:CDS | 70.0% | |
| GCAGCGGCAGACGACGTAGG+AGG | + | chr8.3:1318288-1318307 | None:intergenic | 70.0% | |
| GCGGCAGACGACGTAGGAGG+TGG | + | chr8.3:1318285-1318304 | None:intergenic | 70.0% | |
| ! | GGCAGCGATGGAGGTGGTGG+TGG | - | chr8.3:1318561-1318580 | MS.gene042153:CDS | 70.0% |
| !! | GCGATGGAGGTGGTGGTGGG+CGG | - | chr8.3:1318565-1318584 | MS.gene042153:CDS | 70.0% |
| !! | TGGTGACGGTGGGCGGCGAT+GGG | + | chr8.3:1318265-1318284 | None:intergenic | 70.0% |
| AGGGCAGCGACCGGCAGCGA+TGG | - | chr8.3:1318549-1318568 | MS.gene042153:CDS | 75.0% | |
| GCAGCGACCGGCAGCGATGG+AGG | - | chr8.3:1318552-1318571 | MS.gene042153:CDS | 75.0% | |
| GCGACCGGCAGCGATGGAGG+TGG | - | chr8.3:1318555-1318574 | MS.gene042153:CDS | 75.0% | |
| TGACGGTGGGCGGCGATGGG+AGG | + | chr8.3:1318262-1318281 | None:intergenic | 75.0% | |
| !! | AGGTGGTGGTGGGCGGCGCT+GGG | - | chr8.3:1318572-1318591 | MS.gene042153:CDS | 75.0% |
| !! | GTGGTGACGGTGGGCGGCGA+TGG | + | chr8.3:1318266-1318285 | None:intergenic | 75.0% |
| !!! | GAGGTGGTGGTGGGCGGCGC+TGG | - | chr8.3:1318571-1318590 | MS.gene042153:CDS | 80.0% |
| !!! | TGGTGGTGGGCGGCGCTGGG+AGG | - | chr8.3:1318575-1318594 | MS.gene042153:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 1316894 | 1318637 | 1316894 | ID=MS.gene042153 |
| chr8.3 | mRNA | 1316894 | 1318637 | 1316894 | ID=MS.gene042153.t1;Parent=MS.gene042153 |
| chr8.3 | exon | 1318218 | 1318637 | 1318218 | ID=MS.gene042153.t1.exon1;Parent=MS.gene042153.t1 |
| chr8.3 | CDS | 1318218 | 1318637 | 1318218 | ID=cds.MS.gene042153.t1;Parent=MS.gene042153.t1 |
| chr8.3 | exon | 1316894 | 1316980 | 1316894 | ID=MS.gene042153.t1.exon2;Parent=MS.gene042153.t1 |
| chr8.3 | CDS | 1316894 | 1316980 | 1316894 | ID=cds.MS.gene042153.t1;Parent=MS.gene042153.t1 |
| Gene Sequence |
| Protein sequence |
