Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene042264.t1 | AES92580.2 | 90.6 | 588 | 44 | 1 | 1 | 577 | 3 | 590 | 3.70E-285 | 990.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene042264.t1 | Q6H805 | 41.6 | 555 | 254 | 14 | 18 | 539 | 25 | 542 | 2.6e-69 | 264.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene042264.t1 | G7JHZ3 | 90.6 | 588 | 44 | 1 | 1 | 577 | 3 | 590 | 2.6e-285 | 990.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene042264.t1 | TF | GARP-ARR-B |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene042264.t1 | MTR_4g131600 | 90.986 | 588 | 42 | 1 | 1 | 577 | 3 | 590 | 0.0 | 1063 |
MS.gene042264.t1 | MTR_4g131570 | 70.451 | 599 | 151 | 4 | 2 | 577 | 1 | 596 | 0.0 | 822 |
MS.gene042264.t1 | MTR_4g131580 | 69.831 | 590 | 159 | 4 | 2 | 572 | 1 | 590 | 0.0 | 799 |
MS.gene042264.t1 | MTR_2g450070 | 40.545 | 661 | 289 | 19 | 1 | 568 | 1 | 650 | 1.71e-123 | 379 |
MS.gene042264.t1 | MTR_2g450070 | 40.545 | 661 | 289 | 19 | 1 | 568 | 1 | 650 | 4.56e-123 | 378 |
MS.gene042264.t1 | MTR_3g106220 | 52.147 | 326 | 140 | 6 | 15 | 324 | 5 | 330 | 1.17e-92 | 298 |
MS.gene042264.t1 | MTR_1g013170 | 48.378 | 339 | 144 | 6 | 14 | 324 | 1 | 336 | 6.48e-92 | 291 |
MS.gene042264.t1 | MTR_1g032570 | 55.200 | 250 | 102 | 5 | 18 | 258 | 11 | 259 | 8.02e-84 | 274 |
MS.gene042264.t1 | MTR_4g121020 | 44.959 | 367 | 166 | 10 | 15 | 351 | 25 | 385 | 4.02e-81 | 268 |
MS.gene042264.t1 | MTR_4g121020 | 44.959 | 367 | 166 | 10 | 15 | 351 | 25 | 385 | 4.19e-81 | 268 |
MS.gene042264.t1 | MTR_1g013180 | 48.000 | 325 | 141 | 6 | 14 | 313 | 152 | 473 | 1.06e-80 | 267 |
MS.gene042264.t1 | MTR_3g086100 | 54.582 | 251 | 101 | 5 | 18 | 259 | 13 | 259 | 2.50e-80 | 263 |
MS.gene042264.t1 | MTR_8g079940 | 49.254 | 268 | 120 | 5 | 16 | 278 | 23 | 279 | 1.05e-77 | 255 |
MS.gene042264.t1 | MTR_7g117705 | 46.254 | 307 | 158 | 4 | 14 | 313 | 1 | 307 | 2.51e-77 | 252 |
MS.gene042264.t1 | MTR_2g034960 | 43.353 | 346 | 184 | 4 | 12 | 351 | 23 | 362 | 7.48e-77 | 255 |
MS.gene042264.t1 | MTR_3g102590 | 50.000 | 236 | 70 | 3 | 18 | 252 | 8 | 196 | 2.59e-60 | 200 |
MS.gene042264.t1 | MTR_1g032570 | 54.974 | 191 | 76 | 5 | 77 | 258 | 1 | 190 | 6.18e-58 | 203 |
MS.gene042264.t1 | MTR_3g102590 | 50.000 | 232 | 68 | 3 | 18 | 248 | 8 | 192 | 1.19e-57 | 192 |
MS.gene042264.t1 | MTR_3g086100 | 51.042 | 192 | 81 | 5 | 77 | 259 | 1 | 188 | 9.99e-51 | 182 |
MS.gene042264.t1 | MTR_4g021760 | 37.872 | 235 | 123 | 4 | 17 | 251 | 10 | 221 | 3.75e-49 | 173 |
MS.gene042264.t1 | MTR_4g021790 | 37.500 | 256 | 131 | 4 | 18 | 273 | 10 | 236 | 2.75e-47 | 167 |
MS.gene042264.t1 | MTR_3g102600 | 60.769 | 130 | 51 | 0 | 12 | 141 | 2 | 131 | 1.43e-46 | 162 |
MS.gene042264.t1 | MTR_3g102600 | 60.377 | 53 | 21 | 0 | 198 | 250 | 131 | 183 | 4.97e-15 | 74.3 |
MS.gene042264.t1 | MTR_3g102600 | 60.769 | 130 | 51 | 0 | 12 | 141 | 2 | 131 | 2.05e-46 | 163 |
MS.gene042264.t1 | MTR_3g102600 | 42.056 | 107 | 45 | 2 | 198 | 304 | 131 | 220 | 7.49e-18 | 83.2 |
MS.gene042264.t1 | MTR_4g021855 | 38.235 | 238 | 124 | 3 | 18 | 255 | 10 | 224 | 1.57e-45 | 163 |
MS.gene042264.t1 | MTR_4g021845 | 38.627 | 233 | 118 | 5 | 17 | 248 | 9 | 217 | 1.33e-44 | 158 |
MS.gene042264.t1 | MTR_6g045327 | 35.000 | 260 | 136 | 6 | 12 | 262 | 8 | 243 | 6.57e-42 | 155 |
MS.gene042264.t1 | MTR_4g121020 | 37.943 | 282 | 142 | 9 | 97 | 351 | 6 | 281 | 1.63e-39 | 152 |
MS.gene042264.t1 | MTR_0450s0040 | 36.364 | 242 | 136 | 6 | 22 | 263 | 8 | 231 | 2.51e-39 | 147 |
MS.gene042264.t1 | MTR_1g013160 | 48.344 | 151 | 73 | 2 | 80 | 225 | 1 | 151 | 4.57e-36 | 132 |
MS.gene042264.t1 | MTR_8g105600 | 35.417 | 240 | 150 | 3 | 14 | 252 | 5 | 240 | 8.70e-34 | 136 |
MS.gene042264.t1 | MTR_5g055260 | 34.043 | 235 | 103 | 8 | 18 | 251 | 10 | 193 | 1.87e-31 | 123 |
MS.gene042264.t1 | MTR_3g102600 | 63.415 | 82 | 30 | 0 | 60 | 141 | 1 | 82 | 1.40e-30 | 117 |
MS.gene042264.t1 | MTR_3g102600 | 60.377 | 53 | 21 | 0 | 198 | 250 | 82 | 134 | 2.78e-15 | 73.6 |
MS.gene042264.t1 | MTR_3g102600 | 63.415 | 82 | 30 | 0 | 60 | 141 | 1 | 82 | 1.56e-30 | 118 |
MS.gene042264.t1 | MTR_7g026400 | 35.096 | 208 | 124 | 3 | 48 | 255 | 17 | 213 | 2.89e-30 | 125 |
MS.gene042264.t1 | MTR_8g032710 | 30.502 | 259 | 153 | 7 | 17 | 251 | 16 | 271 | 4.11e-28 | 118 |
MS.gene042264.t1 | MTR_3g092780 | 32.979 | 188 | 105 | 5 | 22 | 195 | 56 | 236 | 4.94e-24 | 107 |
MS.gene042264.t1 | MTR_3g092780 | 32.979 | 188 | 105 | 5 | 22 | 195 | 56 | 236 | 5.13e-24 | 107 |
MS.gene042264.t1 | MTR_8g093040 | 28.926 | 242 | 134 | 3 | 14 | 255 | 10 | 213 | 1.70e-23 | 100 |
MS.gene042264.t1 | MTR_3g092780 | 32.240 | 183 | 112 | 4 | 22 | 195 | 56 | 235 | 3.05e-23 | 104 |
MS.gene042264.t1 | MTR_3g092780 | 32.240 | 183 | 112 | 4 | 22 | 195 | 56 | 235 | 3.29e-23 | 104 |
MS.gene042264.t1 | MTR_4g023980 | 31.875 | 160 | 85 | 3 | 64 | 222 | 35 | 171 | 2.53e-22 | 94.7 |
MS.gene042264.t1 | MTR_7g118260 | 36.090 | 133 | 76 | 2 | 19 | 145 | 11 | 140 | 1.29e-21 | 99.4 |
MS.gene042264.t1 | MTR_6g016850 | 33.121 | 157 | 102 | 2 | 14 | 168 | 5 | 160 | 1.34e-21 | 92.4 |
MS.gene042264.t1 | MTR_7g118260 | 36.719 | 128 | 72 | 2 | 19 | 140 | 11 | 135 | 2.66e-21 | 98.2 |
MS.gene042264.t1 | MTR_4g061360 | 37.705 | 122 | 73 | 1 | 22 | 140 | 89 | 210 | 1.84e-19 | 93.2 |
MS.gene042264.t1 | MTR_4g064730 | 52.381 | 84 | 37 | 2 | 175 | 255 | 104 | 187 | 1.43e-18 | 87.4 |
MS.gene042264.t1 | MTR_1g067110 | 34.426 | 122 | 77 | 1 | 22 | 140 | 85 | 206 | 2.65e-18 | 89.4 |
MS.gene042264.t1 | MTR_1g067110 | 34.426 | 122 | 77 | 1 | 22 | 140 | 85 | 206 | 2.85e-18 | 89.4 |
MS.gene042264.t1 | MTR_3g037390 | 31.579 | 133 | 86 | 2 | 14 | 141 | 14 | 146 | 3.65e-18 | 88.6 |
MS.gene042264.t1 | MTR_8g024260 | 33.600 | 125 | 80 | 1 | 24 | 145 | 38 | 162 | 1.20e-17 | 87.0 |
MS.gene042264.t1 | MTR_4g108880 | 30.303 | 132 | 87 | 2 | 15 | 141 | 24 | 155 | 6.21e-17 | 84.7 |
MS.gene042264.t1 | MTR_7g089010 | 58.621 | 58 | 24 | 0 | 198 | 255 | 90 | 147 | 2.51e-16 | 80.5 |
MS.gene042264.t1 | MTR_5g014040 | 33.553 | 152 | 84 | 3 | 152 | 294 | 264 | 407 | 1.65e-15 | 80.1 |
MS.gene042264.t1 | MTR_5g014040 | 38.400 | 125 | 71 | 3 | 18 | 140 | 14 | 134 | 2.43e-15 | 79.3 |
MS.gene042264.t1 | MTR_4g098870 | 48.750 | 80 | 31 | 1 | 192 | 261 | 303 | 382 | 2.08e-15 | 79.7 |
MS.gene042264.t1 | MTR_4g098870 | 34.677 | 124 | 77 | 2 | 18 | 140 | 14 | 134 | 5.87e-14 | 75.1 |
MS.gene042264.t1 | MTR_4g098870 | 48.750 | 80 | 31 | 1 | 192 | 261 | 323 | 402 | 2.45e-15 | 79.7 |
MS.gene042264.t1 | MTR_4g098870 | 34.677 | 124 | 77 | 2 | 18 | 140 | 34 | 154 | 7.72e-14 | 74.7 |
MS.gene042264.t1 | MTR_4g098870 | 48.750 | 80 | 31 | 1 | 192 | 261 | 303 | 382 | 2.58e-15 | 79.3 |
MS.gene042264.t1 | MTR_4g098870 | 34.677 | 124 | 77 | 2 | 18 | 140 | 14 | 134 | 4.06e-14 | 75.5 |
MS.gene042264.t1 | MTR_5g014040 | 38.400 | 125 | 71 | 3 | 18 | 140 | 14 | 134 | 2.59e-15 | 79.3 |
MS.gene042264.t1 | MTR_5g014040 | 32.484 | 157 | 84 | 4 | 152 | 294 | 264 | 412 | 1.50e-13 | 73.9 |
MS.gene042264.t1 | MTR_4g098870 | 48.750 | 80 | 31 | 1 | 192 | 261 | 323 | 402 | 2.77e-15 | 79.3 |
MS.gene042264.t1 | MTR_4g098870 | 34.677 | 124 | 77 | 2 | 18 | 140 | 34 | 154 | 5.54e-14 | 75.1 |
MS.gene042264.t1 | MTR_4g098870 | 48.750 | 80 | 31 | 1 | 192 | 261 | 342 | 421 | 2.93e-15 | 79.3 |
MS.gene042264.t1 | MTR_4g098870 | 34.677 | 124 | 77 | 2 | 18 | 140 | 53 | 173 | 5.98e-14 | 75.1 |
MS.gene042264.t1 | MTR_7g115530 | 62.500 | 56 | 20 | 1 | 197 | 251 | 216 | 271 | 7.67e-14 | 72.8 |
MS.gene042264.t1 | MTR_5g014040 | 32.484 | 157 | 84 | 4 | 152 | 294 | 224 | 372 | 1.13e-13 | 73.9 |
MS.gene042264.t1 | MTR_7g115530 | 62.500 | 56 | 20 | 1 | 197 | 251 | 216 | 271 | 1.34e-13 | 72.4 |
MS.gene042264.t1 | MTR_7g115530 | 62.500 | 56 | 20 | 1 | 197 | 251 | 216 | 271 | 1.45e-13 | 72.8 |
MS.gene042264.t1 | MTR_7g115530 | 62.500 | 56 | 20 | 1 | 197 | 251 | 216 | 271 | 2.43e-13 | 72.8 |
MS.gene042264.t1 | MTR_4g078810 | 42.857 | 84 | 46 | 1 | 197 | 280 | 156 | 237 | 2.80e-13 | 72.4 |
MS.gene042264.t1 | MTR_2g090675 | 36.585 | 123 | 52 | 4 | 135 | 257 | 123 | 219 | 3.68e-13 | 72.0 |
MS.gene042264.t1 | MTR_1g080330 | 60.714 | 56 | 21 | 1 | 197 | 251 | 173 | 228 | 4.33e-13 | 70.5 |
MS.gene042264.t1 | MTR_1g080330 | 60.714 | 56 | 21 | 1 | 197 | 251 | 173 | 228 | 6.40e-13 | 71.2 |
MS.gene042264.t1 | MTR_6g088950 | 30.827 | 133 | 82 | 3 | 48 | 176 | 34 | 160 | 2.25e-12 | 67.0 |
MS.gene042264.t1 | MTR_7g115530 | 61.111 | 54 | 20 | 1 | 197 | 249 | 216 | 269 | 4.65e-12 | 67.0 |
MS.gene042264.t1 | MTR_7g098250 | 48.000 | 75 | 37 | 2 | 199 | 271 | 262 | 336 | 5.00e-12 | 68.9 |
MS.gene042264.t1 | MTR_7g490310 | 28.662 | 157 | 89 | 3 | 14 | 149 | 1 | 155 | 5.04e-12 | 66.6 |
MS.gene042264.t1 | MTR_4g081710 | 49.153 | 59 | 29 | 1 | 195 | 252 | 13 | 71 | 5.70e-12 | 67.8 |
MS.gene042264.t1 | MTR_2g027860 | 55.000 | 60 | 25 | 2 | 199 | 257 | 49 | 107 | 6.50e-12 | 67.4 |
MS.gene042264.t1 | MTR_6g032990 | 54.237 | 59 | 26 | 1 | 195 | 252 | 38 | 96 | 8.39e-12 | 67.8 |
MS.gene042264.t1 | MTR_7g115530 | 60.000 | 55 | 21 | 1 | 197 | 250 | 216 | 270 | 1.11e-11 | 66.2 |
MS.gene042264.t1 | MTR_2g023580 | 60.000 | 55 | 21 | 1 | 198 | 251 | 54 | 108 | 1.62e-11 | 65.1 |
MS.gene042264.t1 | MTR_5g041350 | 50.847 | 59 | 28 | 1 | 195 | 252 | 11 | 69 | 1.65e-11 | 66.6 |
MS.gene042264.t1 | MTR_1g093080 | 44.928 | 69 | 36 | 2 | 188 | 255 | 201 | 268 | 2.00e-11 | 66.2 |
MS.gene042264.t1 | MTR_4g086835 | 48.276 | 58 | 30 | 0 | 198 | 255 | 273 | 330 | 2.25e-11 | 66.6 |
MS.gene042264.t1 | MTR_2g086450 | 50.847 | 59 | 28 | 1 | 195 | 252 | 41 | 99 | 4.43e-11 | 65.5 |
MS.gene042264.t1 | MTR_3g450310 | 49.296 | 71 | 29 | 2 | 188 | 251 | 2 | 72 | 5.51e-11 | 62.8 |
MS.gene042264.t1 | MTR_4g113140 | 31.250 | 112 | 70 | 3 | 145 | 255 | 187 | 292 | 5.59e-11 | 65.5 |
MS.gene042264.t1 | MTR_0223s0040 | 54.545 | 66 | 29 | 1 | 198 | 262 | 17 | 82 | 7.86e-11 | 63.5 |
MS.gene042264.t1 | MTR_5g017980 | 46.552 | 58 | 31 | 0 | 198 | 255 | 191 | 248 | 8.44e-11 | 63.9 |
MS.gene042264.t1 | MTR_5g017980 | 46.552 | 58 | 31 | 0 | 198 | 255 | 192 | 249 | 8.82e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene042264.t1 | AT2G25180 | 46.486 | 370 | 170 | 7 | 18 | 362 | 13 | 379 | 1.41e-89 | 288 |
MS.gene042264.t1 | AT4G31920 | 50.000 | 318 | 122 | 7 | 18 | 311 | 13 | 317 | 8.49e-81 | 264 |
MS.gene042264.t1 | AT1G67710 | 55.078 | 256 | 105 | 5 | 17 | 265 | 5 | 257 | 5.43e-80 | 261 |
MS.gene042264.t1 | AT5G58080 | 48.466 | 326 | 144 | 9 | 8 | 314 | 3 | 323 | 6.16e-80 | 264 |
MS.gene042264.t1 | AT3G16857 | 47.039 | 304 | 136 | 3 | 9 | 288 | 24 | 326 | 6.81e-80 | 265 |
MS.gene042264.t1 | AT3G16857 | 44.311 | 334 | 157 | 4 | 9 | 314 | 24 | 356 | 1.30e-79 | 265 |
MS.gene042264.t1 | AT2G01760 | 50.195 | 257 | 112 | 4 | 18 | 260 | 7 | 261 | 1.30e-69 | 229 |
MS.gene042264.t1 | AT2G01760 | 45.263 | 285 | 112 | 5 | 18 | 260 | 7 | 289 | 1.68e-63 | 214 |
MS.gene042264.t1 | AT3G16857 | 43.706 | 286 | 132 | 4 | 57 | 314 | 2 | 286 | 2.93e-63 | 219 |
MS.gene042264.t1 | AT5G49240 | 41.633 | 245 | 131 | 5 | 12 | 248 | 32 | 272 | 8.56e-53 | 182 |
MS.gene042264.t1 | AT1G67710 | 52.308 | 195 | 84 | 4 | 77 | 265 | 1 | 192 | 6.83e-52 | 184 |
MS.gene042264.t1 | AT2G01760 | 48.990 | 198 | 85 | 4 | 77 | 260 | 1 | 196 | 2.20e-46 | 166 |
MS.gene042264.t1 | AT3G62670 | 39.662 | 237 | 125 | 6 | 23 | 251 | 42 | 268 | 2.13e-39 | 149 |
MS.gene042264.t1 | AT1G49190 | 30.667 | 300 | 168 | 8 | 18 | 291 | 30 | 315 | 3.29e-39 | 148 |
MS.gene042264.t1 | AT1G67710 | 47.701 | 174 | 82 | 4 | 98 | 265 | 13 | 183 | 1.38e-37 | 145 |
MS.gene042264.t1 | AT5G07210 | 29.965 | 287 | 155 | 5 | 22 | 267 | 16 | 297 | 8.06e-32 | 130 |
MS.gene042264.t1 | AT5G07210 | 29.153 | 295 | 155 | 6 | 22 | 267 | 16 | 305 | 2.08e-29 | 123 |
MS.gene042264.t1 | AT2G27070 | 29.965 | 287 | 158 | 8 | 22 | 267 | 16 | 300 | 1.74e-28 | 120 |
MS.gene042264.t1 | AT1G49190 | 36.800 | 125 | 79 | 0 | 18 | 142 | 30 | 154 | 8.23e-22 | 100 |
MS.gene042264.t1 | AT2G46790 | 38.211 | 123 | 71 | 2 | 22 | 140 | 37 | 158 | 1.27e-21 | 98.2 |
MS.gene042264.t1 | AT2G46790 | 38.211 | 123 | 71 | 2 | 22 | 140 | 37 | 158 | 1.43e-21 | 98.6 |
MS.gene042264.t1 | AT5G24470 | 36.000 | 125 | 75 | 2 | 21 | 141 | 49 | 172 | 1.54e-21 | 99.0 |
MS.gene042264.t1 | AT5G60100 | 38.525 | 122 | 72 | 1 | 22 | 140 | 64 | 185 | 2.34e-19 | 91.3 |
MS.gene042264.t1 | AT5G60100 | 38.525 | 122 | 72 | 1 | 22 | 140 | 64 | 185 | 2.34e-19 | 91.3 |
MS.gene042264.t1 | AT5G60100 | 38.525 | 122 | 72 | 1 | 22 | 140 | 64 | 185 | 2.34e-19 | 91.3 |
MS.gene042264.t1 | AT1G68210 | 24.444 | 270 | 170 | 4 | 22 | 258 | 13 | 281 | 2.41e-19 | 92.8 |
MS.gene042264.t1 | AT5G60100 | 38.525 | 122 | 72 | 1 | 22 | 140 | 64 | 185 | 5.11e-19 | 90.9 |
MS.gene042264.t1 | AT5G60100 | 38.525 | 122 | 72 | 1 | 22 | 140 | 64 | 185 | 5.11e-19 | 90.9 |
MS.gene042264.t1 | AT5G60100 | 38.525 | 122 | 72 | 1 | 22 | 140 | 64 | 185 | 5.11e-19 | 90.9 |
MS.gene042264.t1 | AT5G60100 | 38.525 | 122 | 72 | 1 | 22 | 140 | 64 | 185 | 7.23e-19 | 90.5 |
MS.gene042264.t1 | AT5G05090 | 50.667 | 75 | 37 | 0 | 181 | 255 | 63 | 137 | 1.21e-17 | 83.6 |
MS.gene042264.t1 | AT5G59570 | 39.623 | 106 | 62 | 1 | 152 | 257 | 96 | 199 | 1.47e-17 | 84.0 |
MS.gene042264.t1 | AT5G59570 | 39.623 | 106 | 62 | 1 | 152 | 257 | 96 | 199 | 1.47e-17 | 84.0 |
MS.gene042264.t1 | AT3G46640 | 58.333 | 60 | 25 | 0 | 198 | 257 | 143 | 202 | 2.29e-17 | 84.0 |
MS.gene042264.t1 | AT3G46640 | 58.333 | 60 | 25 | 0 | 198 | 257 | 143 | 202 | 2.29e-17 | 84.0 |
MS.gene042264.t1 | AT3G46640 | 60.345 | 58 | 23 | 0 | 198 | 255 | 143 | 200 | 3.52e-17 | 83.2 |
MS.gene042264.t1 | AT5G02810 | 34.426 | 122 | 77 | 1 | 22 | 140 | 78 | 199 | 3.84e-17 | 85.5 |
MS.gene042264.t1 | AT2G40970 | 58.621 | 58 | 24 | 0 | 198 | 255 | 104 | 161 | 4.77e-17 | 81.6 |
MS.gene042264.t1 | AT3G10760 | 55.385 | 65 | 29 | 0 | 191 | 255 | 97 | 161 | 5.75e-17 | 82.8 |
MS.gene042264.t1 | AT5G61380 | 31.818 | 132 | 85 | 2 | 15 | 141 | 10 | 141 | 8.51e-17 | 84.3 |
MS.gene042264.t1 | AT5G44190 | 61.818 | 55 | 21 | 0 | 197 | 251 | 145 | 199 | 1.67e-15 | 78.6 |
MS.gene042264.t1 | AT5G44190 | 61.818 | 55 | 21 | 0 | 197 | 251 | 145 | 199 | 1.76e-15 | 79.0 |
MS.gene042264.t1 | AT4G18020 | 34.266 | 143 | 85 | 3 | 16 | 151 | 12 | 152 | 1.53e-13 | 73.6 |
MS.gene042264.t1 | AT4G18020 | 34.266 | 143 | 85 | 3 | 16 | 151 | 12 | 152 | 1.53e-13 | 73.6 |
MS.gene042264.t1 | AT4G18020 | 34.266 | 143 | 85 | 3 | 16 | 151 | 12 | 152 | 1.53e-13 | 73.6 |
MS.gene042264.t1 | AT4G18020 | 34.266 | 143 | 85 | 3 | 16 | 151 | 12 | 152 | 1.53e-13 | 73.6 |
MS.gene042264.t1 | AT4G18020 | 34.266 | 143 | 85 | 3 | 16 | 151 | 12 | 152 | 1.53e-13 | 73.6 |
MS.gene042264.t1 | AT4G18020 | 34.266 | 143 | 85 | 3 | 16 | 151 | 12 | 152 | 1.53e-13 | 73.6 |
MS.gene042264.t1 | AT4G18020 | 34.266 | 143 | 85 | 3 | 16 | 151 | 12 | 152 | 2.03e-13 | 73.6 |
MS.gene042264.t1 | AT4G18020 | 34.266 | 143 | 85 | 3 | 16 | 151 | 12 | 152 | 2.03e-13 | 73.6 |
MS.gene042264.t1 | AT4G18020 | 34.266 | 143 | 85 | 3 | 16 | 151 | 12 | 152 | 2.03e-13 | 73.6 |
MS.gene042264.t1 | AT4G18020 | 34.266 | 143 | 85 | 3 | 16 | 151 | 12 | 152 | 2.03e-13 | 73.6 |
MS.gene042264.t1 | AT4G18020 | 34.266 | 143 | 85 | 3 | 16 | 151 | 12 | 152 | 2.03e-13 | 73.6 |
MS.gene042264.t1 | AT2G20570 | 54.098 | 61 | 28 | 0 | 197 | 257 | 151 | 211 | 7.52e-13 | 71.2 |
MS.gene042264.t1 | AT5G45580 | 50.000 | 70 | 32 | 2 | 194 | 262 | 4 | 71 | 1.21e-12 | 68.9 |
MS.gene042264.t1 | AT5G45580 | 50.000 | 70 | 32 | 2 | 194 | 262 | 20 | 87 | 1.25e-12 | 68.9 |
MS.gene042264.t1 | AT2G20570 | 59.259 | 54 | 22 | 0 | 204 | 257 | 174 | 227 | 3.03e-12 | 69.3 |
MS.gene042264.t1 | AT2G01060 | 55.000 | 60 | 25 | 2 | 199 | 257 | 15 | 73 | 5.23e-12 | 67.4 |
MS.gene042264.t1 | AT4G37180 | 51.667 | 60 | 28 | 1 | 197 | 255 | 208 | 267 | 3.04e-11 | 65.9 |
MS.gene042264.t1 | AT3G04030 | 52.727 | 55 | 25 | 1 | 199 | 252 | 45 | 99 | 3.18e-11 | 65.9 |
MS.gene042264.t1 | AT3G04030 | 52.727 | 55 | 25 | 1 | 199 | 252 | 45 | 99 | 3.70e-11 | 65.9 |
MS.gene042264.t1 | AT4G37180 | 51.667 | 60 | 28 | 1 | 197 | 255 | 215 | 274 | 3.72e-11 | 65.5 |
MS.gene042264.t1 | AT5G06800 | 50.000 | 66 | 31 | 2 | 199 | 263 | 192 | 256 | 4.86e-11 | 64.3 |
MS.gene042264.t1 | AT5G18240 | 54.545 | 55 | 24 | 1 | 199 | 252 | 45 | 99 | 5.47e-11 | 65.1 |
MS.gene042264.t1 | AT5G18240 | 54.545 | 55 | 24 | 1 | 199 | 252 | 45 | 99 | 5.47e-11 | 65.1 |
MS.gene042264.t1 | AT5G18240 | 54.545 | 55 | 24 | 1 | 199 | 252 | 45 | 99 | 5.81e-11 | 65.1 |
MS.gene042264.t1 | AT5G18240 | 54.545 | 55 | 24 | 1 | 199 | 252 | 45 | 99 | 5.81e-11 | 65.1 |
MS.gene042264.t1 | AT5G18240 | 54.545 | 55 | 24 | 1 | 199 | 252 | 45 | 99 | 6.18e-11 | 65.1 |
Find 0 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TAAAAAAATCTAAAACAAAA+GGG | + | 33368:6579-6598 | MS.gene042264:intron | 10.0% |
!!! | TTAAAAAAATCTAAAACAAA+AGG | + | 33368:6578-6597 | MS.gene042264:intron | 10.0% |
!!! | TTTTTATGATAGTAAATAAA+TGG | - | 33368:6347-6366 | None:intergenic | 10.0% |
!!! | TTTTTTTCTTTTTTTTTTTG+AGG | - | 33368:6136-6155 | None:intergenic | 10.0% |
!! | AAATAAATGGAAATTATCTT+CGG | - | 33368:6334-6353 | None:intergenic | 15.0% |
!! | CAATTTACTAAAAAAAACTA+AGG | - | 33368:5264-5283 | None:intergenic | 15.0% |
!!! | CTTAGTTTTTTTTAGTAAAT+TGG | + | 33368:5262-5281 | MS.gene042264:intron | 15.0% |
!! | AAATATCCGAATATAAGAAA+TGG | - | 33368:7078-7097 | None:intergenic | 20.0% |
!! | AATGATTATTACTGCTTTAT+TGG | + | 33368:6645-6664 | MS.gene042264:intron | 20.0% |
!! | ATAAGAAATGGATCTTAATT+AGG | - | 33368:7066-7085 | None:intergenic | 20.0% |
!! | GAAGAGACATTTAAATAAAA+AGG | - | 33368:6811-6830 | None:intergenic | 20.0% |
!! | TAAGATCCATTTCTTATATT+CGG | + | 33368:7069-7088 | MS.gene042264:intron | 20.0% |
!! | TGATGAATGATTCTTAAATA+TGG | + | 33368:7532-7551 | MS.gene042264:intron | 20.0% |
!! | TGATTAATGAACTATTAGTT+TGG | - | 33368:8676-8695 | None:intergenic | 20.0% |
!!! | AAACCTTTTTTTTTTCTTTG+AGG | + | 33368:5223-5242 | MS.gene042264:intron | 20.0% |
!!! | AGATGTGTTACAATTTTTTA+GGG | - | 33368:5776-5795 | None:intergenic | 20.0% |
!!! | ATGATTATTACTGCTTTATT+GGG | + | 33368:6646-6665 | MS.gene042264:intron | 20.0% |
!!! | ATTCTTGTTAGCAATATTTT+CGG | - | 33368:7311-7330 | None:intergenic | 20.0% |
!!! | GATTAATGAACTATTAGTTT+GGG | - | 33368:8675-8694 | None:intergenic | 20.0% |
!!! | TTTGAGATTTTTTGACAAAA+GGG | - | 33368:7700-7719 | None:intergenic | 20.0% |
!!! | TTTTTAGTAAATTGGTGATT+AGG | + | 33368:5270-5289 | MS.gene042264:intron | 20.0% |
! | AAAAAAATCACTAACATGTC+AGG | - | 33368:6672-6691 | None:intergenic | 25.0% |
! | AACTACAACCTATTTATCAT+AGG | + | 33368:5985-6004 | MS.gene042264:intron | 25.0% |
! | AAGTTACTCAATAGTTATAG+TGG | - | 33368:5513-5532 | None:intergenic | 25.0% |
! | ACACCAATAAAACTTATTTG+TGG | + | 33368:5336-5355 | MS.gene042264:intron | 25.0% |
! | AGTGTATATTTATGCTTCAT+AGG | + | 33368:6075-6094 | MS.gene042264:intron | 25.0% |
! | AGTTGAAGAAACTACATATT+AGG | - | 33368:7569-7588 | None:intergenic | 25.0% |
! | ATTGAATGAACGAAAAAGAA+AGG | - | 33368:5115-5134 | None:intergenic | 25.0% |
! | CTTAAATTAATGTTATCAGG+CGG | - | 33368:8167-8186 | None:intergenic | 25.0% |
! | GATACAGAATTGATATCAAA+TGG | + | 33368:7841-7860 | MS.gene042264:CDS | 25.0% |
! | GGACTTAAATTAATGTTATC+AGG | - | 33368:8170-8189 | None:intergenic | 25.0% |
! | GTTCTAGTATGATTTAAACA+TGG | - | 33368:5962-5981 | None:intergenic | 25.0% |
! | TTACATAGCCTATGATAAAT+AGG | - | 33368:5996-6015 | None:intergenic | 25.0% |
!! | AAAAATTTGTTTGTTCCGTT+CGG | + | 33368:5445-5464 | MS.gene042264:intron | 25.0% |
!! | AATTTTCATATGAGAATTGC+TGG | + | 33368:6761-6780 | MS.gene042264:intron | 25.0% |
!! | ATATAATTTGTACCTGCAAA+TGG | - | 33368:7669-7688 | None:intergenic | 25.0% |
!! | ATCAAGTCAAGTATTTTCTT+AGG | - | 33368:7610-7629 | None:intergenic | 25.0% |
!! | GGTCTTTTATATAATAATGC+TGG | + | 33368:6782-6801 | MS.gene042264:intron | 25.0% |
!! | TTTTTCCTTCTTTTTCTGAA+TGG | + | 33368:6691-6710 | MS.gene042264:intron | 25.0% |
!!! | CAAAACAGATTTTAAGAGAA+AGG | - | 33368:7039-7058 | None:intergenic | 25.0% |
!!! | GAGATGTGTTACAATTTTTT+AGG | - | 33368:5777-5796 | None:intergenic | 25.0% |
!!! | GTTTGAGATTTTTTGACAAA+AGG | - | 33368:7701-7720 | None:intergenic | 25.0% |
!!! | TTGAATAACTTTTCGATTTG+AGG | + | 33368:6444-6463 | MS.gene042264:intron | 25.0% |
AACATTTGCATTATTGACAG+TGG | - | 33368:8246-8265 | None:intergenic | 30.0% | |
ACGCCTCAAAGAAAAAAAAA+AGG | - | 33368:5229-5248 | None:intergenic | 30.0% | |
ACTCAATAGTTATAGTGGTA+CGG | - | 33368:5508-5527 | None:intergenic | 30.0% | |
ACTGCATTTGAATCATCAAT+TGG | - | 33368:8191-8210 | None:intergenic | 30.0% | |
ATAGGCTATGTAAATGTATC+CGG | + | 33368:6003-6022 | MS.gene042264:intron | 30.0% | |
ATCCTAATAGTGTTTCTCTA+AGG | + | 33368:5594-5613 | MS.gene042264:intron | 30.0% | |
ATGTAGAGAGTAGAAAAACA+AGG | - | 33368:5706-5725 | None:intergenic | 30.0% | |
CTTTCACTTTCAGAAAACAT+TGG | - | 33368:8080-8099 | None:intergenic | 30.0% | |
CTTTGGCAAAAGAATGAATT+AGG | - | 33368:5542-5561 | None:intergenic | 30.0% | |
GATAAATATTCTGCTGAAAC+TGG | - | 33368:8145-8164 | None:intergenic | 30.0% | |
GATTATCTTGCTTCTTCTAA+TGG | + | 33368:8620-8639 | MS.gene042264:CDS | 30.0% | |
GGTAAATGATGATATAGAGA+AGG | + | 33368:7123-7142 | MS.gene042264:CDS | 30.0% | |
TAAACCTTGTATCAGATGAA+AGG | - | 33368:5735-5754 | None:intergenic | 30.0% | |
TAGAAACCACAACAAAACTA+GGG | - | 33368:5680-5699 | None:intergenic | 30.0% | |
TAGAAAGAAGATTGAAAGCA+AGG | + | 33368:7234-7253 | MS.gene042264:CDS | 30.0% | |
TATCAAATGGCTATCTAAAC+AGG | + | 33368:7854-7873 | MS.gene042264:CDS | 30.0% | |
TCAAAACCACACCTAAAATT+GGG | + | 33368:5889-5908 | MS.gene042264:intron | 30.0% | |
TGAATTGTTGAGAGAAAAGA+AGG | + | 33368:6901-6920 | MS.gene042264:CDS | 30.0% | |
TGATTTAAACATGGTGTTTC+TGG | - | 33368:5953-5972 | None:intergenic | 30.0% | |
TGCAATCGAAAATGAAAATG+AGG | - | 33368:7819-7838 | None:intergenic | 30.0% | |
TGCTAACATCACTAATTACA+AGG | - | 33368:6937-6956 | None:intergenic | 30.0% | |
TGTAGAGAGTAGAAAAACAA+GGG | - | 33368:5705-5724 | None:intergenic | 30.0% | |
TGTGTGATTTATAGTGTTGT+CGG | + | 33368:7102-7121 | MS.gene042264:intron | 30.0% | |
TTAGAAACCACAACAAAACT+AGG | - | 33368:5681-5700 | None:intergenic | 30.0% | |
TTCTTCAACTATTATTGCAG+AGG | + | 33368:7579-7598 | MS.gene042264:intron | 30.0% | |
TTGTTAAAATCCTCACTCAA+TGG | - | 33368:8416-8435 | None:intergenic | 30.0% | |
TTTCAACCGTATTTGCAAAA+AGG | - | 33368:7749-7768 | None:intergenic | 30.0% | |
! | AAAAAGAAAGGTACAAAGTG+AGG | + | 33368:7345-7364 | MS.gene042264:CDS | 30.0% |
! | AATCAAGGTATCATTAGTGA+TGG | + | 33368:7262-7281 | MS.gene042264:CDS | 30.0% |
! | ATCAAGGTATCATTAGTGAT+GGG | + | 33368:7263-7282 | MS.gene042264:CDS | 30.0% |
! | TAAATCACTAGCTTGATTCT+TGG | + | 33368:6833-6852 | MS.gene042264:intron | 30.0% |
! | TTGACTTGATGAATGTTGAA+GGG | + | 33368:7620-7639 | MS.gene042264:CDS | 30.0% |
! | TTTTGATGTTGTGAGTAACA+TGG | - | 33368:8572-8591 | None:intergenic | 30.0% |
! | TTTTGCCATTCAGAAAAAGA+AGG | - | 33368:6699-6718 | None:intergenic | 30.0% |
!! | ATAATCCAAGGTATTGTTGA+AGG | - | 33368:8606-8625 | None:intergenic | 30.0% |
!! | GCTCCACAAATAAGTTTTAT+TGG | - | 33368:5342-5361 | None:intergenic | 30.0% |
!! | TCAAGTTGAGAAGTTCTATT+CGG | + | 33368:8706-8725 | MS.gene042264:CDS | 30.0% |
!! | TTGGAAGTAGCTTTGATATA+AGG | + | 33368:5200-5219 | MS.gene042264:intron | 30.0% |
AAAAGAAGCCTCGTTTAGTT+TGG | + | 33368:7410-7429 | MS.gene042264:CDS | 35.0% | |
AACGCATGGACAAAAAAGAA+AGG | + | 33368:7333-7352 | MS.gene042264:CDS | 35.0% | |
AATGTCAAGATGGCTTACTT+GGG | + | 33368:8531-8550 | MS.gene042264:CDS | 35.0% | |
ACTATTAGGATTGAGTCTCT+TGG | - | 33368:5585-5604 | None:intergenic | 35.0% | |
AGAAGAAGCAAGATAATCCA+AGG | - | 33368:8618-8637 | None:intergenic | 35.0% | |
AGAATTGGAAGCAAAGTTAG+AGG | - | 33368:8390-8409 | None:intergenic | 35.0% | |
ATAAATCACTCTCCTGTTGA+AGG | + | 33368:8320-8339 | MS.gene042264:CDS | 35.0% | |
CAAGGAATCATGGAATCAAA+TGG | + | 33368:8731-8750 | MS.gene042264:CDS | 35.0% | |
CACCTTAGAGAAACACTATT+AGG | - | 33368:5599-5618 | None:intergenic | 35.0% | |
CACTAATACATATCAGACTC+CGG | - | 33368:6025-6044 | None:intergenic | 35.0% | |
CTCAAAACCACACCTAAAAT+TGG | + | 33368:5888-5907 | MS.gene042264:intron | 35.0% | |
CTTCTCACATGCAACTATAA+TGG | + | 33368:5082-5101 | MS.gene042264:CDS | 35.0% | |
GAAAGCAAGGATCAAAATCA+AGG | + | 33368:7247-7266 | MS.gene042264:CDS | 35.0% | |
GAATAGAACTTCTCAACTTG+AGG | - | 33368:8707-8726 | None:intergenic | 35.0% | |
GAGCAATTGCTTAATGTAGA+TGG | + | 33368:8767-8786 | MS.gene042264:CDS | 35.0% | |
GCAACGGTGTAAACATATAT+TGG | + | 33368:5181-5200 | MS.gene042264:intron | 35.0% | |
GCTAACAAGAATAAAACGCA+TGG | + | 33368:7319-7338 | MS.gene042264:CDS | 35.0% | |
GTCGAAGAAAAATGAGAACT+GGG | - | 33368:8476-8495 | None:intergenic | 35.0% | |
GTTTCTGCAGTTAATCTTGT+CGG | + | 33368:7457-7476 | MS.gene042264:CDS | 35.0% | |
TACTACAACTACGAAGTCAT+TGG | + | 33368:6871-6890 | MS.gene042264:CDS | 35.0% | |
TCTCTTTGCAACAAACACTA+GGG | - | 33368:5645-5664 | None:intergenic | 35.0% | |
TGTCGAAGAAAAATGAGAAC+TGG | - | 33368:8477-8496 | None:intergenic | 35.0% | |
TTAAGCTCTTCCATTCGAAT+CGG | - | 33368:7193-7212 | None:intergenic | 35.0% | |
TTCTCTTTGCAACAAACACT+AGG | - | 33368:5646-5665 | None:intergenic | 35.0% | |
! | AAACATTGGTGTCTCGAAAT+TGG | - | 33368:8066-8085 | None:intergenic | 35.0% |
! | AAAGAAGCCTCGTTTAGTTT+GGG | + | 33368:7411-7430 | MS.gene042264:CDS | 35.0% |
! | AACATTGGTGTCTCGAAATT+GGG | - | 33368:8065-8084 | None:intergenic | 35.0% |
! | ATCATTAGTGATGGGGTATA+TGG | + | 33368:7271-7290 | MS.gene042264:CDS | 35.0% |
! | CATCCAATGACATGTTTTGT+CGG | + | 33368:7961-7980 | MS.gene042264:CDS | 35.0% |
! | CTTGACTTGATGAATGTTGA+AGG | + | 33368:7619-7638 | MS.gene042264:CDS | 35.0% |
! | GAAAGTTCGAGTTCTTTACA+TGG | + | 33368:8095-8114 | MS.gene042264:CDS | 35.0% |
! | GTTAGCAATATTTTCGGATG+AGG | - | 33368:7305-7324 | None:intergenic | 35.0% |
! | TCAAGGTATCATTAGTGATG+GGG | + | 33368:7264-7283 | MS.gene042264:CDS | 35.0% |
! | TCACCTCCTTTTTGCAAATA+CGG | + | 33368:7740-7759 | MS.gene042264:intron | 35.0% |
! | TTTGAGGTAGCTTAGACATT+CGG | - | 33368:6120-6139 | None:intergenic | 35.0% |
!!! | GGTGATTAGGTTAGTTTTCA+CGG | + | 33368:5283-5302 | MS.gene042264:intron | 35.0% |
!!! | GTTAGTTTTCACGGTTTGAA+CGG | + | 33368:5292-5311 | MS.gene042264:intron | 35.0% |
!!! | TACAAACCCTAGTTTTGTTG+TGG | + | 33368:5671-5690 | MS.gene042264:intron | 35.0% |
AAATGTATCCAGCCATTTGC+AGG | + | 33368:7654-7673 | MS.gene042264:CDS | 40.0% | |
AATGCAGTTACAGATTCCTC+TGG | + | 33368:8203-8222 | MS.gene042264:CDS | 40.0% | |
AATTTGTACCTGCAAATGGC+TGG | - | 33368:7665-7684 | None:intergenic | 40.0% | |
ACATGGCATTCAAACGTCAA+TGG | + | 33368:8112-8131 | MS.gene042264:CDS | 40.0% | |
ACTATTCTCCTCTCATGCAA+CGG | + | 33368:5165-5184 | MS.gene042264:intron | 40.0% | |
ATCAAGCAACCAAAACAACG+TGG | + | 33368:5368-5387 | MS.gene042264:intron | 40.0% | |
ATGGTTGTGGAGGATAGTTT+CGG | + | 33368:4965-4984 | MS.gene042264:CDS | 40.0% | |
ATGTCATTGGATGCATATGC+TGG | - | 33368:7954-7973 | None:intergenic | 40.0% | |
ATGTTATGAGACTGAAGTGG+AGG | - | 33368:8041-8060 | None:intergenic | 40.0% | |
CAACCGTATTTGCAAAAAGG+AGG | - | 33368:7746-7765 | None:intergenic | 40.0% | |
CAACTGATATGTGTGTGAGT+AGG | - | 33368:6174-6193 | None:intergenic | 40.0% | |
CAATGTCAAGATGGCTTACT+TGG | + | 33368:8530-8549 | MS.gene042264:CDS | 40.0% | |
CAATTCTGTTCCATTGAGTG+AGG | + | 33368:8403-8422 | MS.gene042264:CDS | 40.0% | |
CATTCCTTCCAAGTTCAAAC+TGG | - | 33368:8000-8019 | None:intergenic | 40.0% | |
CTATTCGGATCAAGGAATCA+TGG | + | 33368:8721-8740 | MS.gene042264:CDS | 40.0% | |
CTCACCTTTCATCTGATACA+AGG | + | 33368:5728-5747 | MS.gene042264:intron | 40.0% | |
CTCACTCAATGGAACAGAAT+TGG | - | 33368:8405-8424 | None:intergenic | 40.0% | |
GAAACGATGCAATGTCAAGA+TGG | + | 33368:8521-8540 | MS.gene042264:CDS | 40.0% | |
GAATGTTGAAGGGCTTACAA+GGG | + | 33368:7630-7649 | MS.gene042264:CDS | 40.0% | |
GAGAAGTTCTATTCGGATCA+AGG | + | 33368:8713-8732 | MS.gene042264:CDS | 40.0% | |
GGAATGTTATGAGACTGAAG+TGG | - | 33368:8044-8063 | None:intergenic | 40.0% | |
GTCACATAAACTCACTGTCA+AGG | - | 33368:7483-7502 | None:intergenic | 40.0% | |
TAATGGAGACACTAGTTCCA+TGG | + | 33368:8637-8656 | MS.gene042264:CDS | 40.0% | |
TCAAGCAACCAAAACAACGT+GGG | + | 33368:5369-5388 | MS.gene042264:intron | 40.0% | |
TCATGATCCCAAACTAAACG+AGG | - | 33368:7421-7440 | None:intergenic | 40.0% | |
TCCAACTTATCTCAAAGTGC+TGG | + | 33368:5051-5070 | MS.gene042264:CDS | 40.0% | |
TGAATGTTGAAGGGCTTACA+AGG | + | 33368:7629-7648 | MS.gene042264:CDS | 40.0% | |
TGAGCTTACTGATGAAAGGT+AGG | - | 33368:7012-7031 | None:intergenic | 40.0% | |
TGGCTATCTAAACAGGATAG+AGG | + | 33368:7861-7880 | MS.gene042264:CDS | 40.0% | |
TGTGTGAGCTTACTGATGAA+AGG | - | 33368:7016-7035 | None:intergenic | 40.0% | |
TGTTATGAGACTGAAGTGGA+GGG | - | 33368:8040-8059 | None:intergenic | 40.0% | |
TTCCTCCTTCAACAATACCT+TGG | + | 33368:8598-8617 | MS.gene042264:CDS | 40.0% | |
TTGAGGTAGCTTAGACATTC+GGG | - | 33368:6119-6138 | None:intergenic | 40.0% | |
TTGCAACAAACACTAGGGTT+GGG | - | 33368:5640-5659 | None:intergenic | 40.0% | |
TTGGGCTAAACTTTGTACCA+TGG | - | 33368:8657-8676 | None:intergenic | 40.0% | |
TTTGCAACAAACACTAGGGT+TGG | - | 33368:5641-5660 | None:intergenic | 40.0% | |
! | AAGAAAGGTACAAAGTGAGG+AGG | + | 33368:7348-7367 | MS.gene042264:CDS | 40.0% |
! | ACTAAACGAGGCTTCTTTTG+AGG | - | 33368:7409-7428 | None:intergenic | 40.0% |
! | AGACTCCGATTTTCTCACTT+CGG | + | 33368:5840-5859 | MS.gene042264:intron | 40.0% |
! | GTGATGAAGAGTGTGATACA+TGG | + | 33368:7145-7164 | MS.gene042264:CDS | 40.0% |
! | TCTTTTGCCAAGACTGTTGT+GGG | + | 33368:6227-6246 | MS.gene042264:intron | 40.0% |
! | TGGAAGAGCTTAAGAGCATA+TGG | + | 33368:7200-7219 | MS.gene042264:CDS | 40.0% |
! | TGTTGTGGGTGTGTTTGTTT+TGG | + | 33368:6241-6260 | MS.gene042264:intron | 40.0% |
! | TTCTTTTGCCAAGACTGTTG+TGG | + | 33368:6226-6245 | MS.gene042264:intron | 40.0% |
!! | ATCCAAGGTATTGTTGAAGG+AGG | - | 33368:8603-8622 | None:intergenic | 40.0% |
!! | TCCAGCACTTTGAGATAAGT+TGG | - | 33368:5055-5074 | None:intergenic | 40.0% |
!! | TCTAGTGAAACCGATTCGAA+TGG | + | 33368:7180-7199 | MS.gene042264:CDS | 40.0% |
!!! | GTTGACGATGTTTTAGGAGA+AGG | + | 33368:4989-5008 | MS.gene042264:CDS | 40.0% |
!!! | TGTTTTAGGAGAAGGTTTCC+CGG | + | 33368:4997-5016 | MS.gene042264:CDS | 40.0% |
!!! | TTCGGTGTTGACGATGTTTT+AGG | + | 33368:4983-5002 | MS.gene042264:CDS | 40.0% |
AAACACACCCACAACAGTCT+TGG | - | 33368:6237-6256 | None:intergenic | 45.0% | |
AAGGGTTCAGTAGGTGGATA+TGG | + | 33368:7912-7931 | MS.gene042264:CDS | 45.0% | |
AGGATTGAGTCTCTTGGTCA+CGG | - | 33368:5579-5598 | None:intergenic | 45.0% | |
AGGGTTCAGTAGGTGGATAT+GGG | + | 33368:7913-7932 | MS.gene042264:CDS | 45.0% | |
CACACCATCCAGTTTGAACT+TGG | + | 33368:7989-8008 | MS.gene042264:CDS | 45.0% | |
CAGCCGACAAAACATGTCAT+TGG | - | 33368:7967-7986 | None:intergenic | 45.0% | |
CATTGCATCGTTTCCTCCAA+AGG | - | 33368:8515-8534 | None:intergenic | 45.0% | |
CCAATACTGACCTACTTTGG+AGG | + | 33368:5469-5488 | MS.gene042264:intron | 45.0% | |
CCACTTCTGACAGGGTTAAA+AGG | - | 33368:8365-8384 | None:intergenic | 45.0% | |
CCATCCAGTTTGAACTTGGA+AGG | + | 33368:7993-8012 | MS.gene042264:CDS | 45.0% | |
CCTCCAAAGTAGGTCAGTAT+TGG | - | 33368:5472-5491 | None:intergenic | 45.0% | |
CCTTCCAAGTTCAAACTGGA+TGG | - | 33368:7996-8015 | None:intergenic | 45.0% | |
CGGTTTGAACGGTTGTGAAT+CGG | + | 33368:5303-5322 | MS.gene042264:intron | 45.0% | |
CTTGGTCACGGAAAGAGATT+CGG | - | 33368:5567-5586 | None:intergenic | 45.0% | |
GAAGTGAGAAAATCGGAGTC+TGG | - | 33368:5841-5860 | None:intergenic | 45.0% | |
GGTCCAATACTGACCTACTT+TGG | + | 33368:5466-5485 | MS.gene042264:intron | 45.0% | |
TACCAGCAAAAGGGTTCAGT+AGG | + | 33368:7903-7922 | MS.gene042264:CDS | 45.0% | |
TAGAGGAACCACTTCTGACA+GGG | - | 33368:8373-8392 | None:intergenic | 45.0% | |
TCAGCAAGTCGGACTTGAAA+TGG | + | 33368:6985-7004 | MS.gene042264:CDS | 45.0% | |
TGATGTTAGCATGCCAGACA+TGG | + | 33368:6946-6965 | MS.gene042264:CDS | 45.0% | |
TGTTTACACCGTTGCATGAG+AGG | - | 33368:5176-5195 | None:intergenic | 45.0% | |
TTAGAGGAACCACTTCTGAC+AGG | - | 33368:8374-8393 | None:intergenic | 45.0% | |
TTCAAGCTCCTTCAGCAAGT+CGG | + | 33368:6974-6993 | MS.gene042264:CDS | 45.0% | |
TTCACAGCAGAACCTTCAAC+AGG | - | 33368:8335-8354 | None:intergenic | 45.0% | |
TTCAGAATAGTCGTGTGCCT+TGG | + | 33368:8795-8814 | MS.gene042264:CDS | 45.0% | |
TTGGATCCCTACCAGCAAAA+GGG | + | 33368:7894-7913 | MS.gene042264:CDS | 45.0% | |
TTGGTCACGGAAAGAGATTC+GGG | - | 33368:5566-5585 | None:intergenic | 45.0% | |
! | ACTGAACCCTTTTGCTGGTA+GGG | - | 33368:7903-7922 | None:intergenic | 45.0% |
! | AGACATCGTTGCTGTTCCTT+TGG | + | 33368:8496-8515 | MS.gene042264:CDS | 45.0% |
! | AGCAATCGAGGCCCAATTTT+AGG | - | 33368:5903-5922 | None:intergenic | 45.0% |
! | CCTTTTAACCCTGTCAGAAG+TGG | + | 33368:8362-8381 | MS.gene042264:CDS | 45.0% |
! | GACTCCGATTTTCTCACTTC+GGG | + | 33368:5841-5860 | MS.gene042264:intron | 45.0% |
! | GTGTGAGTAGGTAGCTTTAC+TGG | - | 33368:6162-6181 | None:intergenic | 45.0% |
! | TACTGAACCCTTTTGCTGGT+AGG | - | 33368:7904-7923 | None:intergenic | 45.0% |
! | TAGGTCAGTATTGGACCGAA+CGG | - | 33368:5463-5482 | None:intergenic | 45.0% |
! | TCTGGAACTGCCAAAATCGA+CGG | - | 33368:5935-5954 | None:intergenic | 45.0% |
!! | TTTCAAGTCCGACTTGCTGA+AGG | - | 33368:6985-7004 | None:intergenic | 45.0% |
!!! | AAAATATTTTGTTAAAAAAA+TGG | - | 33368:6482-6501 | None:intergenic | 5.0% |
!!! | AAATTATATAAGTATTTTTT+TGG | + | 33368:6529-6548 | MS.gene042264:intron | 5.0% |
AGCAACCAAAACAACGTGGG+TGG | + | 33368:5372-5391 | MS.gene042264:intron | 50.0% | |
AGCTTGAAGCCATCCATGTC+TGG | - | 33368:6962-6981 | None:intergenic | 50.0% | |
CAGCAAAAGGGTTCAGTAGG+TGG | + | 33368:7906-7925 | MS.gene042264:CDS | 50.0% | |
CGGAAAGAGATTCGGGACTT+TGG | - | 33368:5559-5578 | None:intergenic | 50.0% | |
GGATAGAGGAGATGATGCGT+TGG | + | 33368:7875-7894 | MS.gene042264:CDS | 50.0% | |
GGGTTCAGTAGGTGGATATG+GGG | + | 33368:7914-7933 | MS.gene042264:CDS | 50.0% | |
GTTAGCATGCCAGACATGGA+TGG | + | 33368:6950-6969 | MS.gene042264:CDS | 50.0% | |
GTTGGATCCCTACCAGCAAA+AGG | + | 33368:7893-7912 | MS.gene042264:CDS | 50.0% | |
TCTGATGTCTTGGAAGCCAG+AGG | - | 33368:8222-8241 | None:intergenic | 50.0% | |
TGCGCCCGAAGTGAGAAAAT+CGG | - | 33368:5848-5867 | None:intergenic | 50.0% | |
TTTAGGAGAAGGTTTCCCGG+CGG | + | 33368:5000-5019 | MS.gene042264:CDS | 50.0% | |
! | CACCTACTGAACCCTTTTGC+TGG | - | 33368:7908-7927 | None:intergenic | 50.0% |
! | CATCGTTGCTGTTCCTTTGG+AGG | + | 33368:8499-8518 | MS.gene042264:CDS | 50.0% |
!! | TCGAGGCCCAATTTTAGGTG+TGG | - | 33368:5898-5917 | None:intergenic | 50.0% |
!! | TGACAGTGGCTCTGATGTCT+TGG | - | 33368:8232-8251 | None:intergenic | 50.0% |
!!! | TCCAAATCGGCCGTCGATTT+TGG | + | 33368:5922-5941 | MS.gene042264:intron | 50.0% |
GCCAAAATCGACGGCCGATT+TGG | - | 33368:5926-5945 | None:intergenic | 55.0% | |
GCTGCTCTCTCCTCCAAAGT+AGG | - | 33368:5482-5501 | None:intergenic | 55.0% | |
GGGCCTCGATTGCTCCAAAT+CGG | + | 33368:5909-5928 | MS.gene042264:intron | 55.0% | |
TTAGGAGAAGGTTTCCCGGC+GGG | + | 33368:5001-5020 | MS.gene042264:CDS | 55.0% | |
! | AGCTGCCACCCACGTTGTTT+TGG | - | 33368:5380-5399 | None:intergenic | 55.0% |
!! | CGGCCGATTTGGAGCAATCG+AGG | - | 33368:5915-5934 | None:intergenic | 60.0% |
CCAGAACACGCATACCCGCC+GGG | - | 33368:5018-5037 | None:intergenic | 65.0% | |
GCCAGAACACGCATACCCGC+CGG | - | 33368:5019-5038 | None:intergenic | 65.0% | |
CCCGGCGGGTATGCGTGTTC+TGG | + | 33368:5015-5034 | MS.gene042264:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
33368 | gene | 4962 | 8829 | 4962 | ID=MS.gene042264 |
33368 | mRNA | 4962 | 8829 | 4962 | ID=MS.gene042264.t1;Parent=MS.gene042264 |
33368 | exon | 4962 | 5103 | 4962 | ID=MS.gene042264.t1.exon1;Parent=MS.gene042264.t1 |
33368 | CDS | 4962 | 5103 | 4962 | ID=cds.MS.gene042264.t1;Parent=MS.gene042264.t1 |
33368 | exon | 6870 | 7022 | 6870 | ID=MS.gene042264.t1.exon2;Parent=MS.gene042264.t1 |
33368 | CDS | 6870 | 7022 | 6870 | ID=cds.MS.gene042264.t1;Parent=MS.gene042264.t1 |
33368 | exon | 7116 | 7487 | 7116 | ID=MS.gene042264.t1.exon3;Parent=MS.gene042264.t1 |
33368 | CDS | 7116 | 7487 | 7116 | ID=cds.MS.gene042264.t1;Parent=MS.gene042264.t1 |
33368 | exon | 7599 | 7675 | 7599 | ID=MS.gene042264.t1.exon4;Parent=MS.gene042264.t1 |
33368 | CDS | 7599 | 7675 | 7599 | ID=cds.MS.gene042264.t1;Parent=MS.gene042264.t1 |
33368 | exon | 7840 | 8829 | 7840 | ID=MS.gene042264.t1.exon5;Parent=MS.gene042264.t1 |
33368 | CDS | 7840 | 8829 | 7840 | ID=cds.MS.gene042264.t1;Parent=MS.gene042264.t1 |
Gene Sequence |
Protein sequence |