Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene042265.t1 | RHN64928.1 | 94 | 597 | 36 | 0 | 1 | 597 | 2 | 598 | 2.40E-292 | 1014.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene042265.t1 | A2X1N2 | 41.1 | 562 | 277 | 11 | 17 | 559 | 25 | 551 | 5.2e-65 | 250.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene042265.t1 | G7JHZ2 | 94.0 | 597 | 36 | 0 | 1 | 597 | 1 | 597 | 1.8e-292 | 1014.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene042265.t1 | TF | GARP-ARR-B |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene042265.t1 | MTR_4g131580 | 94.807 | 597 | 31 | 0 | 1 | 597 | 1 | 597 | 0.0 | 1125 |
MS.gene042265.t1 | MTR_4g131570 | 77.234 | 593 | 126 | 4 | 1 | 588 | 1 | 589 | 0.0 | 889 |
MS.gene042265.t1 | MTR_4g131600 | 71.864 | 590 | 158 | 3 | 1 | 590 | 4 | 585 | 0.0 | 818 |
MS.gene042265.t1 | MTR_2g450070 | 44.150 | 641 | 268 | 19 | 3 | 566 | 4 | 631 | 6.25e-128 | 390 |
MS.gene042265.t1 | MTR_2g450070 | 44.150 | 641 | 268 | 19 | 3 | 566 | 4 | 631 | 7.08e-128 | 391 |
MS.gene042265.t1 | MTR_3g106220 | 44.888 | 401 | 182 | 9 | 17 | 394 | 8 | 392 | 9.57e-93 | 298 |
MS.gene042265.t1 | MTR_1g013170 | 47.135 | 384 | 176 | 10 | 17 | 382 | 5 | 379 | 5.14e-92 | 292 |
MS.gene042265.t1 | MTR_1g032570 | 48.464 | 293 | 138 | 6 | 17 | 297 | 11 | 302 | 1.78e-83 | 274 |
MS.gene042265.t1 | MTR_4g121020 | 42.559 | 383 | 184 | 7 | 17 | 375 | 31 | 401 | 8.26e-82 | 271 |
MS.gene042265.t1 | MTR_4g121020 | 42.559 | 383 | 184 | 7 | 17 | 375 | 31 | 401 | 8.44e-82 | 271 |
MS.gene042265.t1 | MTR_1g013180 | 49.186 | 307 | 146 | 3 | 17 | 314 | 156 | 461 | 1.32e-79 | 265 |
MS.gene042265.t1 | MTR_2g034960 | 46.687 | 332 | 158 | 7 | 9 | 326 | 21 | 347 | 1.46e-79 | 263 |
MS.gene042265.t1 | MTR_7g117705 | 49.823 | 283 | 135 | 5 | 15 | 292 | 3 | 283 | 3.05e-78 | 255 |
MS.gene042265.t1 | MTR_8g079940 | 44.311 | 334 | 147 | 9 | 15 | 327 | 23 | 338 | 2.61e-77 | 255 |
MS.gene042265.t1 | MTR_3g086100 | 51.908 | 262 | 93 | 4 | 17 | 260 | 13 | 259 | 4.07e-75 | 250 |
MS.gene042265.t1 | MTR_1g032570 | 47.863 | 234 | 109 | 6 | 76 | 297 | 1 | 233 | 1.08e-58 | 206 |
MS.gene042265.t1 | MTR_3g102590 | 47.541 | 244 | 78 | 2 | 11 | 253 | 2 | 196 | 5.14e-58 | 194 |
MS.gene042265.t1 | MTR_3g102590 | 46.667 | 240 | 78 | 2 | 11 | 249 | 2 | 192 | 1.48e-54 | 184 |
MS.gene042265.t1 | MTR_3g086100 | 50.246 | 203 | 68 | 4 | 76 | 260 | 1 | 188 | 3.94e-50 | 181 |
MS.gene042265.t1 | MTR_3g102600 | 63.710 | 124 | 45 | 0 | 17 | 140 | 8 | 131 | 1.94e-47 | 164 |
MS.gene042265.t1 | MTR_3g102600 | 59.677 | 62 | 24 | 1 | 191 | 251 | 122 | 183 | 1.16e-16 | 79.0 |
MS.gene042265.t1 | MTR_3g102600 | 63.710 | 124 | 45 | 0 | 17 | 140 | 8 | 131 | 4.55e-47 | 165 |
MS.gene042265.t1 | MTR_3g102600 | 64.706 | 68 | 23 | 1 | 191 | 257 | 122 | 189 | 2.36e-20 | 90.5 |
MS.gene042265.t1 | MTR_4g021760 | 34.274 | 248 | 138 | 3 | 16 | 263 | 10 | 232 | 7.00e-44 | 159 |
MS.gene042265.t1 | MTR_4g021790 | 36.437 | 247 | 132 | 4 | 17 | 263 | 10 | 231 | 1.14e-43 | 157 |
MS.gene042265.t1 | MTR_4g121020 | 36.842 | 304 | 156 | 7 | 96 | 375 | 6 | 297 | 6.51e-43 | 162 |
MS.gene042265.t1 | MTR_0450s0040 | 36.154 | 260 | 133 | 5 | 21 | 279 | 8 | 235 | 9.32e-42 | 154 |
MS.gene042265.t1 | MTR_4g021855 | 36.032 | 247 | 133 | 5 | 17 | 263 | 10 | 231 | 3.25e-41 | 151 |
MS.gene042265.t1 | MTR_4g021845 | 37.021 | 235 | 121 | 6 | 16 | 249 | 9 | 217 | 6.68e-40 | 145 |
MS.gene042265.t1 | MTR_6g045327 | 33.600 | 250 | 139 | 3 | 15 | 263 | 12 | 235 | 1.44e-39 | 149 |
MS.gene042265.t1 | MTR_1g013160 | 50.000 | 148 | 71 | 2 | 79 | 223 | 1 | 148 | 8.68e-37 | 134 |
MS.gene042265.t1 | MTR_3g102600 | 64.634 | 82 | 29 | 0 | 59 | 140 | 1 | 82 | 2.55e-31 | 119 |
MS.gene042265.t1 | MTR_3g102600 | 61.017 | 59 | 22 | 1 | 194 | 251 | 76 | 134 | 1.76e-16 | 77.0 |
MS.gene042265.t1 | MTR_3g102600 | 64.634 | 82 | 29 | 0 | 59 | 140 | 1 | 82 | 3.27e-31 | 120 |
MS.gene042265.t1 | MTR_3g102600 | 64.706 | 68 | 23 | 1 | 191 | 257 | 73 | 140 | 1.22e-20 | 90.1 |
MS.gene042265.t1 | MTR_8g105600 | 34.298 | 242 | 152 | 3 | 17 | 257 | 9 | 244 | 4.60e-31 | 128 |
MS.gene042265.t1 | MTR_7g026400 | 34.685 | 222 | 128 | 3 | 47 | 266 | 17 | 223 | 2.08e-29 | 123 |
MS.gene042265.t1 | MTR_5g055260 | 32.365 | 241 | 111 | 6 | 17 | 257 | 10 | 198 | 7.49e-29 | 115 |
MS.gene042265.t1 | MTR_8g032710 | 25.769 | 260 | 172 | 4 | 16 | 255 | 16 | 274 | 3.98e-24 | 106 |
MS.gene042265.t1 | MTR_3g092780 | 37.795 | 127 | 74 | 2 | 21 | 143 | 56 | 181 | 1.22e-23 | 105 |
MS.gene042265.t1 | MTR_3g092780 | 37.795 | 127 | 74 | 2 | 21 | 143 | 56 | 181 | 1.31e-23 | 105 |
MS.gene042265.t1 | MTR_3g092780 | 37.903 | 124 | 72 | 2 | 21 | 140 | 56 | 178 | 4.36e-23 | 104 |
MS.gene042265.t1 | MTR_3g092780 | 37.903 | 124 | 72 | 2 | 21 | 140 | 56 | 178 | 4.63e-23 | 104 |
MS.gene042265.t1 | MTR_7g118260 | 36.090 | 133 | 76 | 2 | 18 | 144 | 11 | 140 | 2.11e-22 | 102 |
MS.gene042265.t1 | MTR_4g023980 | 33.540 | 161 | 83 | 4 | 63 | 223 | 35 | 171 | 3.78e-22 | 94.4 |
MS.gene042265.t1 | MTR_7g118260 | 36.719 | 128 | 72 | 2 | 18 | 139 | 11 | 135 | 4.53e-22 | 100 |
MS.gene042265.t1 | MTR_4g061360 | 39.231 | 130 | 75 | 2 | 14 | 139 | 81 | 210 | 6.45e-22 | 100 |
MS.gene042265.t1 | MTR_8g024260 | 36.000 | 125 | 77 | 1 | 23 | 144 | 38 | 162 | 3.03e-21 | 98.6 |
MS.gene042265.t1 | MTR_1g067110 | 38.525 | 122 | 72 | 1 | 21 | 139 | 85 | 206 | 6.87e-21 | 97.4 |
MS.gene042265.t1 | MTR_1g067110 | 38.525 | 122 | 72 | 1 | 21 | 139 | 85 | 206 | 7.61e-21 | 97.4 |
MS.gene042265.t1 | MTR_4g064730 | 61.842 | 76 | 26 | 1 | 182 | 257 | 116 | 188 | 9.70e-21 | 93.6 |
MS.gene042265.t1 | MTR_8g093040 | 28.049 | 246 | 135 | 6 | 17 | 261 | 14 | 218 | 2.28e-20 | 92.0 |
MS.gene042265.t1 | MTR_6g016850 | 32.836 | 134 | 87 | 2 | 17 | 148 | 9 | 141 | 9.87e-19 | 84.3 |
MS.gene042265.t1 | MTR_7g089010 | 53.846 | 78 | 36 | 0 | 180 | 257 | 71 | 148 | 1.14e-18 | 87.4 |
MS.gene042265.t1 | MTR_3g037390 | 33.333 | 123 | 79 | 1 | 21 | 140 | 24 | 146 | 7.40e-18 | 87.4 |
MS.gene042265.t1 | MTR_4g108880 | 33.333 | 123 | 79 | 1 | 21 | 140 | 33 | 155 | 8.08e-18 | 87.4 |
MS.gene042265.t1 | MTR_5g014040 | 39.516 | 124 | 71 | 2 | 17 | 139 | 14 | 134 | 5.45e-16 | 81.6 |
MS.gene042265.t1 | MTR_5g014040 | 59.016 | 61 | 25 | 0 | 193 | 253 | 304 | 364 | 7.94e-15 | 77.8 |
MS.gene042265.t1 | MTR_5g014040 | 39.516 | 124 | 71 | 2 | 17 | 139 | 14 | 134 | 5.97e-16 | 81.6 |
MS.gene042265.t1 | MTR_5g014040 | 54.545 | 66 | 25 | 1 | 193 | 253 | 304 | 369 | 7.16e-13 | 71.6 |
MS.gene042265.t1 | MTR_4g098870 | 62.069 | 58 | 22 | 0 | 196 | 253 | 306 | 363 | 5.65e-15 | 78.6 |
MS.gene042265.t1 | MTR_4g098870 | 36.290 | 124 | 75 | 2 | 17 | 139 | 14 | 134 | 1.69e-14 | 77.0 |
MS.gene042265.t1 | MTR_4g098870 | 62.069 | 58 | 22 | 0 | 196 | 253 | 326 | 383 | 5.74e-15 | 78.6 |
MS.gene042265.t1 | MTR_4g098870 | 36.290 | 124 | 75 | 2 | 17 | 139 | 34 | 154 | 1.99e-14 | 76.6 |
MS.gene042265.t1 | MTR_4g098870 | 62.069 | 58 | 22 | 0 | 196 | 253 | 306 | 363 | 5.92e-15 | 78.6 |
MS.gene042265.t1 | MTR_4g098870 | 36.290 | 124 | 75 | 2 | 17 | 139 | 14 | 134 | 2.49e-14 | 76.3 |
MS.gene042265.t1 | MTR_4g098870 | 62.069 | 58 | 22 | 0 | 196 | 253 | 326 | 383 | 6.50e-15 | 78.2 |
MS.gene042265.t1 | MTR_4g098870 | 36.290 | 124 | 75 | 2 | 17 | 139 | 34 | 154 | 3.00e-14 | 76.3 |
MS.gene042265.t1 | MTR_4g098870 | 60.656 | 61 | 24 | 0 | 193 | 253 | 342 | 402 | 6.73e-15 | 78.2 |
MS.gene042265.t1 | MTR_4g098870 | 36.290 | 124 | 75 | 2 | 17 | 139 | 53 | 173 | 2.27e-14 | 76.6 |
MS.gene042265.t1 | MTR_1g093080 | 51.471 | 68 | 32 | 1 | 193 | 259 | 204 | 271 | 1.78e-14 | 75.9 |
MS.gene042265.t1 | MTR_4g113140 | 46.429 | 84 | 41 | 2 | 197 | 279 | 232 | 312 | 4.36e-14 | 75.1 |
MS.gene042265.t1 | MTR_5g014040 | 54.545 | 66 | 25 | 1 | 193 | 253 | 264 | 329 | 6.39e-13 | 71.6 |
MS.gene042265.t1 | MTR_4g086835 | 52.459 | 61 | 29 | 0 | 197 | 257 | 271 | 331 | 7.82e-13 | 71.2 |
MS.gene042265.t1 | MTR_7g490310 | 30.612 | 147 | 79 | 3 | 23 | 148 | 11 | 155 | 1.16e-12 | 68.6 |
MS.gene042265.t1 | MTR_7g115530 | 54.839 | 62 | 27 | 1 | 198 | 258 | 216 | 277 | 1.81e-12 | 68.9 |
MS.gene042265.t1 | MTR_7g115530 | 54.839 | 62 | 27 | 1 | 198 | 258 | 216 | 277 | 3.06e-12 | 68.6 |
MS.gene042265.t1 | MTR_4g078810 | 40.476 | 84 | 48 | 1 | 198 | 281 | 156 | 237 | 3.83e-12 | 68.9 |
MS.gene042265.t1 | MTR_7g115530 | 54.839 | 62 | 27 | 1 | 198 | 258 | 216 | 277 | 4.37e-12 | 68.2 |
MS.gene042265.t1 | MTR_7g115530 | 56.667 | 60 | 25 | 1 | 200 | 258 | 218 | 277 | 4.91e-12 | 68.6 |
MS.gene042265.t1 | MTR_7g098250 | 46.835 | 79 | 40 | 2 | 196 | 272 | 258 | 336 | 5.96e-12 | 68.6 |
MS.gene042265.t1 | MTR_5g017980 | 50.847 | 59 | 29 | 0 | 199 | 257 | 191 | 249 | 6.76e-12 | 67.4 |
MS.gene042265.t1 | MTR_2g090675 | 41.333 | 75 | 43 | 1 | 178 | 252 | 140 | 213 | 6.92e-12 | 68.2 |
MS.gene042265.t1 | MTR_5g017980 | 50.847 | 59 | 29 | 0 | 199 | 257 | 192 | 250 | 7.07e-12 | 67.4 |
MS.gene042265.t1 | MTR_1g080330 | 51.562 | 64 | 30 | 1 | 196 | 258 | 171 | 234 | 7.80e-12 | 66.6 |
MS.gene042265.t1 | MTR_1g080330 | 51.562 | 64 | 30 | 1 | 196 | 258 | 171 | 234 | 9.21e-12 | 67.4 |
MS.gene042265.t1 | MTR_5g036480 | 26.163 | 172 | 107 | 4 | 21 | 172 | 16 | 187 | 1.87e-11 | 64.7 |
MS.gene042265.t1 | MTR_4g086835 | 51.613 | 62 | 29 | 1 | 197 | 257 | 271 | 332 | 2.21e-11 | 66.6 |
MS.gene042265.t1 | MTR_1874s0010 | 31.858 | 113 | 73 | 2 | 19 | 129 | 2 | 112 | 2.54e-11 | 64.3 |
MS.gene042265.t1 | MTR_6g088950 | 29.545 | 132 | 85 | 2 | 47 | 175 | 34 | 160 | 2.76e-11 | 63.9 |
MS.gene042265.t1 | MTR_5g054300 | 49.180 | 61 | 30 | 1 | 198 | 257 | 196 | 256 | 3.98e-11 | 65.5 |
MS.gene042265.t1 | MTR_2g086450 | 53.333 | 60 | 27 | 1 | 196 | 254 | 41 | 100 | 6.80e-11 | 64.7 |
MS.gene042265.t1 | MTR_5g041350 | 52.542 | 59 | 27 | 1 | 196 | 253 | 11 | 69 | 6.99e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene042265.t1 | AT2G25180 | 48.205 | 390 | 175 | 10 | 1 | 374 | 1 | 379 | 1.09e-94 | 302 |
MS.gene042265.t1 | AT4G31920 | 51.562 | 320 | 131 | 6 | 17 | 325 | 13 | 319 | 2.49e-90 | 290 |
MS.gene042265.t1 | AT5G58080 | 44.416 | 394 | 195 | 8 | 9 | 395 | 6 | 382 | 4.89e-81 | 268 |
MS.gene042265.t1 | AT3G16857 | 47.987 | 298 | 128 | 3 | 15 | 288 | 31 | 325 | 4.58e-80 | 266 |
MS.gene042265.t1 | AT3G16857 | 47.987 | 298 | 128 | 3 | 15 | 288 | 31 | 325 | 8.39e-80 | 266 |
MS.gene042265.t1 | AT1G67710 | 55.253 | 257 | 96 | 5 | 16 | 260 | 5 | 254 | 4.29e-77 | 254 |
MS.gene042265.t1 | AT2G01760 | 49.810 | 263 | 108 | 5 | 17 | 262 | 7 | 262 | 1.10e-66 | 222 |
MS.gene042265.t1 | AT3G16857 | 47.471 | 257 | 108 | 3 | 56 | 288 | 2 | 255 | 5.63e-66 | 227 |
MS.gene042265.t1 | AT2G01760 | 45.017 | 291 | 108 | 6 | 17 | 262 | 7 | 290 | 1.29e-60 | 207 |
MS.gene042265.t1 | AT1G67710 | 53.571 | 196 | 73 | 4 | 76 | 260 | 1 | 189 | 3.28e-51 | 183 |
MS.gene042265.t1 | AT5G49240 | 40.816 | 245 | 135 | 3 | 11 | 249 | 32 | 272 | 1.50e-50 | 176 |
MS.gene042265.t1 | AT2G01760 | 50.000 | 204 | 78 | 5 | 76 | 262 | 1 | 197 | 1.96e-45 | 163 |
MS.gene042265.t1 | AT3G62670 | 36.700 | 297 | 164 | 9 | 11 | 300 | 31 | 310 | 8.56e-40 | 151 |
MS.gene042265.t1 | AT1G49190 | 29.967 | 307 | 168 | 7 | 17 | 300 | 30 | 312 | 1.83e-38 | 147 |
MS.gene042265.t1 | AT1G67710 | 49.143 | 175 | 71 | 4 | 97 | 260 | 13 | 180 | 4.40e-37 | 144 |
MS.gene042265.t1 | AT5G07210 | 29.710 | 276 | 153 | 4 | 21 | 262 | 16 | 284 | 2.21e-29 | 123 |
MS.gene042265.t1 | AT5G07210 | 28.873 | 284 | 153 | 5 | 21 | 262 | 16 | 292 | 4.68e-27 | 116 |
MS.gene042265.t1 | AT2G27070 | 30.182 | 275 | 158 | 6 | 21 | 263 | 16 | 288 | 5.25e-25 | 109 |
MS.gene042265.t1 | AT5G24470 | 38.095 | 126 | 73 | 2 | 19 | 140 | 48 | 172 | 3.83e-23 | 103 |
MS.gene042265.t1 | AT2G46790 | 36.806 | 144 | 83 | 4 | 3 | 139 | 16 | 158 | 3.99e-23 | 103 |
MS.gene042265.t1 | AT2G46790 | 36.806 | 144 | 83 | 4 | 3 | 139 | 16 | 158 | 4.51e-23 | 103 |
MS.gene042265.t1 | AT1G49190 | 36.800 | 125 | 79 | 0 | 17 | 141 | 30 | 154 | 1.02e-22 | 103 |
MS.gene042265.t1 | AT5G59570 | 61.250 | 80 | 30 | 1 | 178 | 257 | 120 | 198 | 1.09e-22 | 99.4 |
MS.gene042265.t1 | AT5G59570 | 61.250 | 80 | 30 | 1 | 178 | 257 | 120 | 198 | 1.09e-22 | 99.4 |
MS.gene042265.t1 | AT5G60100 | 38.462 | 130 | 76 | 2 | 14 | 139 | 56 | 185 | 6.05e-22 | 99.0 |
MS.gene042265.t1 | AT5G60100 | 38.462 | 130 | 76 | 2 | 14 | 139 | 56 | 185 | 6.05e-22 | 99.0 |
MS.gene042265.t1 | AT5G60100 | 38.462 | 130 | 76 | 2 | 14 | 139 | 56 | 185 | 6.05e-22 | 99.0 |
MS.gene042265.t1 | AT5G60100 | 38.462 | 130 | 76 | 2 | 14 | 139 | 56 | 185 | 1.10e-21 | 99.0 |
MS.gene042265.t1 | AT5G60100 | 38.462 | 130 | 76 | 2 | 14 | 139 | 56 | 185 | 1.10e-21 | 99.0 |
MS.gene042265.t1 | AT5G60100 | 38.462 | 130 | 76 | 2 | 14 | 139 | 56 | 185 | 1.10e-21 | 99.0 |
MS.gene042265.t1 | AT5G60100 | 38.462 | 130 | 76 | 2 | 14 | 139 | 56 | 185 | 1.70e-21 | 98.6 |
MS.gene042265.t1 | AT3G46640 | 62.667 | 75 | 27 | 1 | 183 | 257 | 128 | 201 | 1.83e-21 | 96.3 |
MS.gene042265.t1 | AT3G46640 | 62.667 | 75 | 27 | 1 | 183 | 257 | 128 | 201 | 1.83e-21 | 96.3 |
MS.gene042265.t1 | AT3G46640 | 62.667 | 75 | 27 | 1 | 183 | 257 | 128 | 201 | 2.37e-21 | 95.9 |
MS.gene042265.t1 | AT5G05090 | 59.459 | 74 | 30 | 0 | 184 | 257 | 65 | 138 | 2.13e-20 | 91.7 |
MS.gene042265.t1 | AT5G02810 | 36.885 | 122 | 74 | 1 | 21 | 139 | 78 | 199 | 9.60e-20 | 94.0 |
MS.gene042265.t1 | AT3G10760 | 63.636 | 66 | 24 | 0 | 192 | 257 | 97 | 162 | 1.27e-19 | 90.9 |
MS.gene042265.t1 | AT2G40970 | 63.077 | 65 | 24 | 0 | 193 | 257 | 98 | 162 | 4.74e-19 | 87.4 |
MS.gene042265.t1 | AT1G68210 | 28.148 | 270 | 162 | 6 | 21 | 259 | 13 | 281 | 1.45e-18 | 90.5 |
MS.gene042265.t1 | AT5G61380 | 34.959 | 123 | 77 | 1 | 21 | 140 | 19 | 141 | 1.19e-17 | 87.0 |
MS.gene042265.t1 | AT5G44190 | 58.333 | 60 | 25 | 0 | 193 | 252 | 140 | 199 | 2.61e-15 | 78.6 |
MS.gene042265.t1 | AT5G44190 | 58.333 | 60 | 25 | 0 | 193 | 252 | 140 | 199 | 3.02e-15 | 78.2 |
MS.gene042265.t1 | AT4G18020 | 37.063 | 143 | 81 | 3 | 15 | 150 | 12 | 152 | 3.47e-14 | 75.9 |
MS.gene042265.t1 | AT4G18020 | 57.895 | 57 | 22 | 1 | 196 | 252 | 294 | 348 | 4.46e-11 | 65.9 |
MS.gene042265.t1 | AT4G18020 | 37.063 | 143 | 81 | 3 | 15 | 150 | 12 | 152 | 3.47e-14 | 75.9 |
MS.gene042265.t1 | AT4G18020 | 57.895 | 57 | 22 | 1 | 196 | 252 | 294 | 348 | 4.46e-11 | 65.9 |
MS.gene042265.t1 | AT4G18020 | 37.063 | 143 | 81 | 3 | 15 | 150 | 12 | 152 | 3.47e-14 | 75.9 |
MS.gene042265.t1 | AT4G18020 | 57.895 | 57 | 22 | 1 | 196 | 252 | 294 | 348 | 4.46e-11 | 65.9 |
MS.gene042265.t1 | AT4G18020 | 37.063 | 143 | 81 | 3 | 15 | 150 | 12 | 152 | 3.47e-14 | 75.9 |
MS.gene042265.t1 | AT4G18020 | 57.895 | 57 | 22 | 1 | 196 | 252 | 294 | 348 | 4.46e-11 | 65.9 |
MS.gene042265.t1 | AT4G18020 | 37.063 | 143 | 81 | 3 | 15 | 150 | 12 | 152 | 3.47e-14 | 75.9 |
MS.gene042265.t1 | AT4G18020 | 57.895 | 57 | 22 | 1 | 196 | 252 | 294 | 348 | 4.46e-11 | 65.9 |
MS.gene042265.t1 | AT4G18020 | 37.063 | 143 | 81 | 3 | 15 | 150 | 12 | 152 | 3.47e-14 | 75.9 |
MS.gene042265.t1 | AT4G18020 | 57.895 | 57 | 22 | 1 | 196 | 252 | 294 | 348 | 4.46e-11 | 65.9 |
MS.gene042265.t1 | AT1G25550 | 44.828 | 87 | 46 | 2 | 189 | 274 | 199 | 284 | 4.22e-14 | 74.3 |
MS.gene042265.t1 | AT4G18020 | 37.063 | 143 | 81 | 3 | 15 | 150 | 12 | 152 | 4.59e-14 | 75.5 |
MS.gene042265.t1 | AT4G18020 | 57.895 | 57 | 22 | 1 | 196 | 252 | 294 | 348 | 4.19e-11 | 66.2 |
MS.gene042265.t1 | AT4G18020 | 37.063 | 143 | 81 | 3 | 15 | 150 | 12 | 152 | 4.59e-14 | 75.5 |
MS.gene042265.t1 | AT4G18020 | 57.895 | 57 | 22 | 1 | 196 | 252 | 294 | 348 | 4.19e-11 | 66.2 |
MS.gene042265.t1 | AT4G18020 | 37.063 | 143 | 81 | 3 | 15 | 150 | 12 | 152 | 4.59e-14 | 75.5 |
MS.gene042265.t1 | AT4G18020 | 57.895 | 57 | 22 | 1 | 196 | 252 | 294 | 348 | 4.19e-11 | 66.2 |
MS.gene042265.t1 | AT4G18020 | 37.063 | 143 | 81 | 3 | 15 | 150 | 12 | 152 | 4.59e-14 | 75.5 |
MS.gene042265.t1 | AT4G18020 | 57.895 | 57 | 22 | 1 | 196 | 252 | 294 | 348 | 4.19e-11 | 66.2 |
MS.gene042265.t1 | AT4G18020 | 37.063 | 143 | 81 | 3 | 15 | 150 | 12 | 152 | 4.59e-14 | 75.5 |
MS.gene042265.t1 | AT4G18020 | 57.895 | 57 | 22 | 1 | 196 | 252 | 294 | 348 | 4.19e-11 | 66.2 |
MS.gene042265.t1 | AT2G20570 | 48.101 | 79 | 38 | 1 | 174 | 252 | 130 | 205 | 2.38e-13 | 72.8 |
MS.gene042265.t1 | AT2G03500 | 45.205 | 73 | 39 | 1 | 199 | 270 | 232 | 304 | 2.85e-13 | 72.8 |
MS.gene042265.t1 | AT1G68670 | 44.304 | 79 | 42 | 2 | 182 | 259 | 198 | 275 | 3.02e-13 | 72.0 |
MS.gene042265.t1 | AT4G37180 | 43.373 | 83 | 46 | 1 | 176 | 257 | 186 | 268 | 1.65e-12 | 69.7 |
MS.gene042265.t1 | AT4G37180 | 43.373 | 83 | 46 | 1 | 176 | 257 | 193 | 275 | 1.82e-12 | 69.7 |
MS.gene042265.t1 | AT3G13040 | 51.562 | 64 | 30 | 1 | 199 | 261 | 240 | 303 | 8.65e-12 | 68.2 |
MS.gene042265.t1 | AT3G13040 | 51.562 | 64 | 30 | 1 | 199 | 261 | 240 | 303 | 8.65e-12 | 68.2 |
MS.gene042265.t1 | AT3G13040 | 51.562 | 64 | 30 | 1 | 199 | 261 | 240 | 303 | 8.65e-12 | 68.2 |
MS.gene042265.t1 | AT2G20570 | 62.500 | 48 | 18 | 0 | 205 | 252 | 174 | 221 | 1.08e-11 | 67.8 |
MS.gene042265.t1 | AT3G25790 | 51.724 | 58 | 27 | 1 | 204 | 260 | 200 | 257 | 1.87e-11 | 66.6 |
MS.gene042265.t1 | AT1G49560 | 45.070 | 71 | 38 | 1 | 199 | 268 | 191 | 261 | 3.88e-11 | 65.1 |
MS.gene042265.t1 | AT1G79430 | 39.130 | 115 | 49 | 4 | 196 | 308 | 30 | 125 | 3.92e-11 | 65.5 |
MS.gene042265.t1 | AT3G04030 | 53.333 | 60 | 27 | 1 | 196 | 254 | 41 | 100 | 4.51e-11 | 65.5 |
MS.gene042265.t1 | AT3G12730 | 45.238 | 84 | 43 | 3 | 179 | 261 | 3 | 84 | 4.85e-11 | 63.5 |
MS.gene042265.t1 | AT3G04030 | 53.333 | 60 | 27 | 1 | 196 | 254 | 41 | 100 | 4.88e-11 | 65.5 |
Find 0 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATAAAAAGGGAAAAAAA+GGG | - | 33368:12100-12119 | None:intergenic | 15.0% |
!! | AATTAATCATATTTGCAAAA+AGG | - | 33368:13610-13629 | None:intergenic | 15.0% |
!! | CAAATATGATTAATTTAAAG+GGG | + | 33368:13615-13634 | MS.gene042265:intron | 15.0% |
!! | CCGATAAAATAAAATAAAAA+GGG | - | 33368:12110-12129 | None:intergenic | 15.0% |
!! | GCAAATATGATTAATTTAAA+GGG | + | 33368:13614-13633 | MS.gene042265:intron | 15.0% |
!! | TAAAATAAAAAGGGAAAAAA+AGG | - | 33368:12101-12120 | None:intergenic | 15.0% |
!! | TGCAAATATGATTAATTTAA+AGG | + | 33368:13613-13632 | MS.gene042265:intron | 15.0% |
!!! | CCCTTTTTATTTTATTTTAT+CGG | + | 33368:12107-12126 | MS.gene042265:intron | 15.0% |
!!! | TGAGATACATTTAAAATAAA+AGG | - | 33368:12600-12619 | None:intergenic | 15.0% |
!! | AAGATGTAAATTTCAACTTT+AGG | - | 33368:12447-12466 | None:intergenic | 20.0% |
!! | ATGAAGAAACTACATATATT+AGG | - | 33368:13425-13444 | None:intergenic | 20.0% |
!! | CAATCATGTAAACATATAAT+TGG | + | 33368:12053-12072 | MS.gene042265:intron | 20.0% |
!! | GCCGATAAAATAAAATAAAA+AGG | - | 33368:12111-12130 | None:intergenic | 20.0% |
!! | TACTATCTAAATATAAGAAG+TGG | - | 33368:12865-12884 | None:intergenic | 20.0% |
!! | TGATGATTGATACTTAAATA+GGG | + | 33368:13388-13407 | MS.gene042265:intron | 20.0% |
!! | TTATAAGCTATAAGAATGTT+CGG | + | 33368:12199-12218 | MS.gene042265:intron | 20.0% |
!! | TTTAACAATGATCAAATTTC+TGG | + | 33368:14403-14422 | MS.gene042265:CDS | 20.0% |
!! | TTTAAGTATCAATCATCAAA+TGG | - | 33368:13386-13405 | None:intergenic | 20.0% |
!!! | AGTGATTATATTAGTTTCTA+GGG | + | 33368:12156-12175 | MS.gene042265:intron | 20.0% |
!!! | ATTCAACATTTGCTATTATT+GGG | + | 33368:12544-12563 | MS.gene042265:intron | 20.0% |
!!! | TTAGTGATGATTTTTTCTTT+TGG | + | 33368:12889-12908 | MS.gene042265:intron | 20.0% |
!!! | TTGATGATTGATACTTAAAT+AGG | + | 33368:13387-13406 | MS.gene042265:intron | 20.0% |
! | ACACATGTTAAGGAAAATTA+AGG | - | 33368:12822-12841 | None:intergenic | 25.0% |
! | ATTGAACGAATGAAAAAGAA+AGG | - | 33368:11979-11998 | None:intergenic | 25.0% |
! | CTTAAATTCATGTTACTAAG+TGG | - | 33368:14142-14161 | None:intergenic | 25.0% |
! | GAATAAAATTTCTCAACTTG+AGG | - | 33368:14700-14719 | None:intergenic | 25.0% |
! | TAAGTGTGATGTGTATATAT+AGG | + | 33368:12289-12308 | MS.gene042265:intron | 25.0% |
! | TAATCATATTTGCAAAAAGG+CGG | - | 33368:13607-13626 | None:intergenic | 25.0% |
! | TATAGGTTATATAAGTCTTC+CGG | + | 33368:12306-12325 | MS.gene042265:intron | 25.0% |
! | TTGTTAAAATGATCACTCAA+TGG | - | 33368:14391-14410 | None:intergenic | 25.0% |
!! | AAAGCACTTGTATAATCAAT+TGG | - | 33368:14166-14185 | None:intergenic | 25.0% |
!! | AAATTCATTCTTTTGCAAGA+TGG | + | 33368:12400-12419 | MS.gene042265:intron | 25.0% |
!! | GAGTGATTATATTAGTTTCT+AGG | + | 33368:12155-12174 | MS.gene042265:intron | 25.0% |
!! | TTTGTTAGCTTACTAATGAA+AGG | - | 33368:12799-12818 | None:intergenic | 25.0% |
!!! | AGTCTGAAACTTTTTACTAA+AGG | - | 33368:13559-13578 | None:intergenic | 25.0% |
!!! | ATCAAGTCACGTATTTTTTT+AGG | - | 33368:13468-13487 | None:intergenic | 25.0% |
!!! | ATTACTACTTTTTATTGTGC+CGG | + | 33368:12473-12492 | MS.gene042265:intron | 25.0% |
!!! | GATTCAACATTTGCTATTAT+TGG | + | 33368:12543-12562 | MS.gene042265:intron | 25.0% |
!!! | GTCTGAAACTTTTTACTAAA+GGG | - | 33368:13558-13577 | None:intergenic | 25.0% |
!!! | TCTGAAACTTTTTACTAAAG+GGG | - | 33368:13557-13576 | None:intergenic | 25.0% |
AAAAAGAAAGGAACAAAGTG+AGG | + | 33368:13151-13170 | MS.gene042265:CDS | 30.0% | |
ACACATGTGTTAATTAGCAT+CGG | + | 33368:12226-12245 | MS.gene042265:intron | 30.0% | |
ACAGTGAGTTTATATGACAA+TGG | + | 33368:13297-13316 | MS.gene042265:intron | 30.0% | |
AGAGAATGTAAGTGATTGAA+TGG | - | 33368:12259-12278 | None:intergenic | 30.0% | |
ATACGCTTGCATACAAATAA+TGG | + | 33368:13655-13674 | MS.gene042265:intron | 30.0% | |
CTTACTTGACAATGTTGTAA+AGG | + | 33368:14534-14553 | MS.gene042265:CDS | 30.0% | |
GAGAATGTAAGTGATTGAAT+GGG | - | 33368:12258-12277 | None:intergenic | 30.0% | |
GCTGAATAATACACATGTTA+AGG | - | 33368:12832-12851 | None:intergenic | 30.0% | |
GTTGAATCAAAATAGTGATG+AGG | - | 33368:12531-12550 | None:intergenic | 30.0% | |
GTTTCTATAGTTAATCTGCT+TGG | + | 33368:13269-13288 | MS.gene042265:CDS | 30.0% | |
TGAATCACTACTTTGATTCT+TGG | + | 33368:12621-12640 | MS.gene042265:intron | 30.0% | |
TTAACTTATTGTGTCATCCA+AGG | - | 33368:14809-14828 | None:intergenic | 30.0% | |
TTCTTCATCTATTATTGCAG+AGG | + | 33368:13437-13456 | MS.gene042265:intron | 30.0% | |
TTTGTAAATCACTCTTCTGT+TGG | + | 33368:14292-14311 | MS.gene042265:CDS | 30.0% | |
! | GTAGCAGGATTAAAAGATTT+TGG | - | 33368:14334-14353 | None:intergenic | 30.0% |
! | GTTAGCAATATTTTCAGATG+AGG | - | 33368:13111-13130 | None:intergenic | 30.0% |
! | TCTTTTAATCCTGCTACAAA+TGG | + | 33368:14337-14356 | MS.gene042265:CDS | 30.0% |
! | TTATAATTTGTACCTGCAGA+TGG | - | 33368:13527-13546 | None:intergenic | 30.0% |
!! | CGTTAATGGACTATTAGTTT+GGG | - | 33368:14668-14687 | None:intergenic | 30.0% |
!! | GTTAATGGACTATTAGTTTG+GGG | - | 33368:14667-14686 | None:intergenic | 30.0% |
!! | TCGTTAATGGACTATTAGTT+TGG | - | 33368:14669-14688 | None:intergenic | 30.0% |
AAATGATCACTCAATGGAGA+AGG | - | 33368:14385-14404 | None:intergenic | 35.0% | |
AATGCATGGACGAAAAAGAA+AGG | + | 33368:13139-13158 | MS.gene042265:CDS | 35.0% | |
ATAAGAAGCAAGAGAATCCA+AGG | - | 33368:14611-14630 | None:intergenic | 35.0% | |
ATGTCACTAGATGCATATGT+TGG | - | 33368:13929-13948 | None:intergenic | 35.0% | |
CTTAAGATTCTTCTAGATCC+AGG | - | 33368:13896-13915 | None:intergenic | 35.0% | |
CTTCTCACATGCAAGTATAA+TGG | + | 33368:11946-11965 | MS.gene042265:CDS | 35.0% | |
CTTTCACTTGCAGAAAACAT+CGG | - | 33368:14055-14074 | None:intergenic | 35.0% | |
GAAAGCAAGGATCAAAATCA+AGG | + | 33368:13053-13072 | MS.gene042265:CDS | 35.0% | |
GAGAAAGAAGATTGAAAGCA+AGG | + | 33368:13040-13059 | MS.gene042265:CDS | 35.0% | |
GCTAACAAGAAGAAAATGCA+TGG | + | 33368:13125-13144 | MS.gene042265:CDS | 35.0% | |
GGTTTCTATTACTAATGTGC+CGG | - | 33368:12495-12514 | None:intergenic | 35.0% | |
GTCATATAAACTCACTGTCA+AGG | - | 33368:13295-13314 | None:intergenic | 35.0% | |
GTGACTTGATGAATGTTGAA+GGG | + | 33368:13478-13497 | MS.gene042265:CDS | 35.0% | |
TAACAGTATCTCTGATGTCT+TGG | - | 33368:14207-14226 | None:intergenic | 35.0% | |
TAATGAAGACACTAGTTCCA+TGG | + | 33368:14630-14649 | MS.gene042265:CDS | 35.0% | |
TACTACAACTACGAATTCAG+TGG | + | 33368:12654-12673 | MS.gene042265:CDS | 35.0% | |
TCATTATCCCAAACAAAACG+CGG | - | 33368:13233-13252 | None:intergenic | 35.0% | |
TCTACTTTAGCCTGTTTAGA+CGG | - | 33368:13809-13828 | None:intergenic | 35.0% | |
TGATGAGGTTTATAGTGATG+AGG | - | 33368:12516-12535 | None:intergenic | 35.0% | |
TGATGTAAACATGCCAGAAA+TGG | + | 33368:12729-12748 | MS.gene042265:CDS | 35.0% | |
TGGAAATTAACCAGTTTCAG+CGG | + | 33368:14107-14126 | MS.gene042265:CDS | 35.0% | |
TTAGATGAACCATTTGTAGC+AGG | - | 33368:14349-14368 | None:intergenic | 35.0% | |
TTAGCTTACTAATGAAAGGC+AGG | - | 33368:12795-12814 | None:intergenic | 35.0% | |
TTATTCCAATGCAAGAGTGA+TGG | + | 33368:14714-14733 | MS.gene042265:CDS | 35.0% | |
TTCTTCCTTCAACAATACCT+TGG | + | 33368:14591-14610 | MS.gene042265:CDS | 35.0% | |
TTGGTGTGATATAGTGTTGT+CGG | + | 33368:12908-12927 | MS.gene042265:intron | 35.0% | |
! | ACTTTTCCTAAAGTGAGAAC+TGG | - | 33368:14452-14471 | None:intergenic | 35.0% |
! | AGTGCTTTTACAGTTTCTTC+TGG | + | 33368:14178-14197 | MS.gene042265:CDS | 35.0% |
! | AGTGTCGAAGAAAAATCAAC+TGG | - | 33368:14475-14494 | None:intergenic | 35.0% |
! | CATCTAGTGACATGTTTTCT+CGG | + | 33368:13936-13955 | MS.gene042265:CDS | 35.0% |
! | CTTTTCCTAAAGTGAGAACT+GGG | - | 33368:14451-14470 | None:intergenic | 35.0% |
!! | AATCAAGGTATCGTTAGTGA+TGG | + | 33368:13068-13087 | MS.gene042265:CDS | 35.0% |
!! | AGAATCCAAGGTATTGTTGA+AGG | - | 33368:14599-14618 | None:intergenic | 35.0% |
!! | ATCAAGGTATCGTTAGTGAT+GGG | + | 33368:13069-13088 | MS.gene042265:CDS | 35.0% |
AAAGGCTTCCTGCGTTATAA+AGG | - | 33368:12582-12601 | None:intergenic | 40.0% | |
AAGAAAGGAACAAAGTGAGG+AGG | + | 33368:13154-13173 | MS.gene042265:CDS | 40.0% | |
ACCTATATGTAGCTGATGTG+AGG | - | 33368:12336-12355 | None:intergenic | 40.0% | |
AGTGAAGATGTTACCGAAGA+AGG | + | 33368:11853-11872 | MS.gene042265:CDS | 40.0% | |
ATCACTCAATGGAGAAGGAT+TGG | - | 33368:14380-14399 | None:intergenic | 40.0% | |
CACCTATCAACACATACTTC+AGG | + | 33368:14265-14284 | MS.gene042265:CDS | 40.0% | |
CCTATATGTAGCTGATGTGA+GGG | - | 33368:12335-12354 | None:intergenic | 40.0% | |
CGTGACTTGATGAATGTTGA+AGG | + | 33368:13477-13496 | MS.gene042265:CDS | 40.0% | |
GAATGTTGAAGGGCTTACAA+GGG | + | 33368:13488-13507 | MS.gene042265:CDS | 40.0% | |
GATAAATGTTCCGCTGAAAC+TGG | - | 33368:14120-14139 | None:intergenic | 40.0% | |
GATAGAGAAAGGGTGATGAA+AGG | + | 33368:12939-12958 | MS.gene042265:CDS | 40.0% | |
GATTCTTCTAGATCCAGGTA+AGG | - | 33368:13891-13910 | None:intergenic | 40.0% | |
GCTATTATTGGGTGAATCGA+CGG | + | 33368:12555-12574 | MS.gene042265:intron | 40.0% | |
GGGACATGATGATAGAGAAA+GGG | + | 33368:12929-12948 | MS.gene042265:CDS | 40.0% | |
GGGTTTGAACAATGACTTCT+TGG | + | 33368:12176-12195 | MS.gene042265:intron | 40.0% | |
GTAAACATGCCAGAAATGGA+TGG | + | 33368:12733-12752 | MS.gene042265:CDS | 40.0% | |
GTAAATCACTCTTCTGTTGG+AGG | + | 33368:14295-14314 | MS.gene042265:CDS | 40.0% | |
TACTGATGAAGAGAATGACG+AGG | + | 33368:13187-13206 | MS.gene042265:CDS | 40.0% | |
TCAAAAAAGCAATCACCACG+TGG | - | 33368:14742-14761 | None:intergenic | 40.0% | |
TGAATGTTGAAGGGCTTACA+AGG | + | 33368:13487-13506 | MS.gene042265:CDS | 40.0% | |
TGAGAATAGTTGTGTGTCCT+TGG | + | 33368:14789-14808 | MS.gene042265:CDS | 40.0% | |
TGGAGGAGCTTAAGAACATA+TGG | + | 33368:13006-13025 | MS.gene042265:CDS | 40.0% | |
TGGTGTGATATAGTGTTGTC+GGG | + | 33368:12909-12928 | MS.gene042265:intron | 40.0% | |
TGTTCTTAAGCTCCTCCAAT+CGG | - | 33368:13004-13023 | None:intergenic | 40.0% | |
! | CTCCTGAAGTATGTGTTGAT+AGG | - | 33368:14270-14289 | None:intergenic | 40.0% |
! | GAAAGCTTGAGTTTTTCCCA+GGG | + | 33368:14070-14089 | MS.gene042265:CDS | 40.0% |
! | GTGATGAAAGGTGTGATGAA+AGG | + | 33368:12951-12970 | MS.gene042265:CDS | 40.0% |
! | TGAAAGCTTGAGTTTTTCCC+AGG | + | 33368:14069-14088 | MS.gene042265:CDS | 40.0% |
! | TGAGCAAGTTGGACTTGAAA+TGG | + | 33368:12768-12787 | MS.gene042265:CDS | 40.0% |
! | TGTTACCGAAGAAGGTTTTC+CGG | + | 33368:11861-11880 | MS.gene042265:CDS | 40.0% |
! | TTTCAAGTCCAACTTGCTCA+AGG | - | 33368:12768-12787 | None:intergenic | 40.0% |
!! | GGAAGCACTTGAATTGTTGA+GGG | + | 33368:12675-12694 | MS.gene042265:CDS | 40.0% |
!! | TCAAGGTATCGTTAGTGATG+GGG | + | 33368:13070-13089 | MS.gene042265:CDS | 40.0% |
!! | TGGAAGCACTTGAATTGTTG+AGG | + | 33368:12674-12693 | MS.gene042265:CDS | 40.0% |
!!! | ATGTTTTGAGACTGAAGTGG+AGG | - | 33368:14016-14035 | None:intergenic | 40.0% |
!!! | GGAATGTTTTGAGACTGAAG+TGG | - | 33368:14019-14038 | None:intergenic | 40.0% |
!!! | TGTTTTGAGACTGAAGTGGA+GGG | - | 33368:14015-14034 | None:intergenic | 40.0% |
AAATGTAGCTAGCCATCTGC+AGG | + | 33368:13512-13531 | MS.gene042265:CDS | 45.0% | |
AAGGGTTCAGTAGGTGGATA+TGG | + | 33368:13854-13873 | MS.gene042265:CDS | 45.0% | |
ACCAACCGGAAAACCTTCTT+CGG | - | 33368:11869-11888 | None:intergenic | 45.0% | |
AGCTTGAAGCCATCCATTTC+TGG | - | 33368:12745-12764 | None:intergenic | 45.0% | |
ATGACGAGGAACACTCAACT+CGG | + | 33368:13201-13220 | MS.gene042265:CDS | 45.0% | |
CCCTCACATCAGCTACATAT+AGG | + | 33368:12332-12351 | MS.gene042265:intron | 45.0% | |
CGGGACATGATGATAGAGAA+AGG | + | 33368:12928-12947 | MS.gene042265:CDS | 45.0% | |
GAAGCGATGCAATGTCAAGA+TGG | + | 33368:14511-14530 | MS.gene042265:CDS | 45.0% | |
TCTAGTCAAACCGATCCGAT+TGG | + | 33368:12986-13005 | MS.gene042265:CDS | 45.0% | |
TCTCAAACGACCGTCTAAAC+AGG | + | 33368:13796-13815 | MS.gene042265:CDS | 45.0% | |
TGGTTCCATCACTCTTGCAT+TGG | - | 33368:14722-14741 | None:intergenic | 45.0% | |
TTAAGCTCCTCCAATCGGAT+CGG | - | 33368:12999-13018 | None:intergenic | 45.0% | |
TTCAAGCTCCTTGAGCAAGT+TGG | + | 33368:12757-12776 | MS.gene042265:CDS | 45.0% | |
TTGGGGTACACTTTGTACCA+TGG | - | 33368:14650-14669 | None:intergenic | 45.0% | |
! | AAACATCGGCTGCTTGAAAC+TGG | - | 33368:14041-14060 | None:intergenic | 45.0% |
! | AACATCGGCTGCTTGAAACT+GGG | - | 33368:14040-14059 | None:intergenic | 45.0% |
! | ATCGTTAGTGATGGGGTATG+TGG | + | 33368:13077-13096 | MS.gene042265:CDS | 45.0% |
! | TGAGGCATCTGAGTCGTTAA+TGG | - | 33368:14682-14701 | None:intergenic | 45.0% |
!! | TCAGACTAGTCTCAAAGTGC+TGG | + | 33368:11915-11934 | MS.gene042265:CDS | 45.0% |
!! | TTCGACACTTGCTGTTCCTT+CGG | + | 33368:14486-14505 | MS.gene042265:CDS | 45.0% |
!! | TTCTGTTGGAGGTGCTTATG+TGG | + | 33368:14306-14325 | MS.gene042265:CDS | 45.0% |
!!! | GAAGAAGCCGCGTTTTGTTT+GGG | + | 33368:13223-13242 | MS.gene042265:CDS | 45.0% |
ACTGGATCCTCTCCAGCAAA+AGG | + | 33368:13835-13854 | MS.gene042265:CDS | 50.0% | |
AGTCAAACCGATCCGATTGG+AGG | + | 33368:12989-13008 | MS.gene042265:CDS | 50.0% | |
CAGCAAAAGGGTTCAGTAGG+TGG | + | 33368:13848-13867 | MS.gene042265:CDS | 50.0% | |
CCTAAAGTGAGAACTGGGAG+AGG | - | 33368:14446-14465 | None:intergenic | 50.0% | |
CCTCTCCCAGTTCTCACTTT+AGG | + | 33368:14443-14462 | MS.gene042265:CDS | 50.0% | |
CTCCAGCAAAAGGGTTCAGT+AGG | + | 33368:13845-13864 | MS.gene042265:CDS | 50.0% | |
CTGGATCCTCTCCAGCAAAA+GGG | + | 33368:13836-13855 | MS.gene042265:CDS | 50.0% | |
GGCTAAAGTAGATGCTGCAC+TGG | + | 33368:13817-13836 | MS.gene042265:CDS | 50.0% | |
TCGACGGTCCTTTATAACGC+AGG | + | 33368:12571-12590 | MS.gene042265:intron | 50.0% | |
! | ACCGAAGAAGGTTTTCCGGT+TGG | + | 33368:11865-11884 | MS.gene042265:CDS | 50.0% |
! | ACTGAACCCTTTTGCTGGAG+AGG | - | 33368:13845-13864 | None:intergenic | 50.0% |
! | CACCTACTGAACCCTTTTGC+TGG | - | 33368:13850-13869 | None:intergenic | 50.0% |
! | GAGCAACTGCTTGCTCTAGA+TGG | + | 33368:14760-14779 | MS.gene042265:CDS | 50.0% |
! | GGAGATTTTCGCACCTTACC+TGG | + | 33368:13875-13894 | MS.gene042265:CDS | 50.0% |
!! | GGAAGAAGCCGCGTTTTGTT+TGG | + | 33368:13222-13241 | MS.gene042265:CDS | 50.0% |
CATTGCATCGCTTCCTCCGA+AGG | - | 33368:14505-14524 | None:intergenic | 55.0% | |
GCCAGAACACGCATACCAAC+CGG | - | 33368:11883-11902 | None:intergenic | 55.0% | |
GTAGCTGATGTGAGGGACAC+CGG | - | 33368:12328-12347 | None:intergenic | 55.0% | |
TGAGACTGAAGTGGAGGGAC+TGG | - | 33368:14010-14029 | None:intergenic | 55.0% | |
! | GCAAGAGTGATGGAACCACG+TGG | + | 33368:14724-14743 | MS.gene042265:CDS | 55.0% |
! | TCCGGTTGGTATGCGTGTTC+TGG | + | 33368:11879-11898 | MS.gene042265:CDS | 55.0% |
! | TTCCCAGGGCGTTCGAACAT+CGG | + | 33368:14084-14103 | MS.gene042265:CDS | 55.0% |
!! | GACACTTGCTGTTCCTTCGG+AGG | + | 33368:14489-14508 | MS.gene042265:CDS | 55.0% |
CACCGATGTTCGAACGCCCT+GGG | - | 33368:14089-14108 | None:intergenic | 60.0% | |
CCACCGATGTTCGAACGCCC+TGG | - | 33368:14090-14109 | None:intergenic | 65.0% | |
! | CCAGGGCGTTCGAACATCGG+TGG | + | 33368:14087-14106 | MS.gene042265:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
33368 | gene | 11829 | 14828 | 11829 | ID=MS.gene042265 |
33368 | mRNA | 11829 | 14828 | 11829 | ID=MS.gene042265.t1;Parent=MS.gene042265 |
33368 | exon | 11829 | 11967 | 11829 | ID=MS.gene042265.t1.exon1;Parent=MS.gene042265.t1 |
33368 | CDS | 11829 | 11967 | 11829 | ID=cds.MS.gene042265.t1;Parent=MS.gene042265.t1 |
33368 | exon | 12653 | 12805 | 12653 | ID=MS.gene042265.t1.exon2;Parent=MS.gene042265.t1 |
33368 | CDS | 12653 | 12805 | 12653 | ID=cds.MS.gene042265.t1;Parent=MS.gene042265.t1 |
33368 | exon | 12922 | 13299 | 12922 | ID=MS.gene042265.t1.exon3;Parent=MS.gene042265.t1 |
33368 | CDS | 12922 | 13299 | 12922 | ID=cds.MS.gene042265.t1;Parent=MS.gene042265.t1 |
33368 | exon | 13457 | 13533 | 13457 | ID=MS.gene042265.t1.exon4;Parent=MS.gene042265.t1 |
33368 | CDS | 13457 | 13533 | 13457 | ID=cds.MS.gene042265.t1;Parent=MS.gene042265.t1 |
33368 | exon | 13782 | 14828 | 13782 | ID=MS.gene042265.t1.exon5;Parent=MS.gene042265.t1 |
33368 | CDS | 13782 | 14828 | 13782 | ID=cds.MS.gene042265.t1;Parent=MS.gene042265.t1 |
Gene Sequence |
Protein sequence |