Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene042355.t1 | XP_024632961.1 | 86 | 720 | 77 | 4 | 1 | 696 | 81 | 800 | 0.00E+00 | 1243 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene042355.t1 | Q9SZL8 | 26.2 | 583 | 352 | 12 | 21 | 589 | 119 | 637 | 9.3e-53 | 209.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene042355.t1 | D3YBB9 | 77.9 | 709 | 125 | 5 | 2 | 688 | 114 | 812 | 0.0e+00 | 1101.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene042355.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene042355.t1 | MTR_0558s0020 | 87.013 | 231 | 30 | 0 | 1 | 231 | 66 | 296 | 2.20e-147 | 431 |
MS.gene042355.t1 | MTR_6g090505 | 81.857 | 237 | 43 | 0 | 1 | 237 | 1 | 237 | 7.93e-137 | 407 |
MS.gene042355.t1 | MTR_6g090505 | 66.667 | 102 | 7 | 2 | 320 | 419 | 230 | 306 | 3.81e-33 | 131 |
MS.gene042355.t1 | MTR_6g090505 | 77.551 | 49 | 11 | 0 | 491 | 539 | 314 | 362 | 2.12e-11 | 66.6 |
MS.gene042355.t1 | MTR_1g083640 | 88.235 | 204 | 24 | 0 | 1 | 204 | 81 | 284 | 1.43e-130 | 388 |
MS.gene042355.t1 | MTR_8g446020 | 85.366 | 205 | 30 | 0 | 27 | 231 | 52 | 256 | 1.10e-126 | 377 |
MS.gene042355.t1 | MTR_0337s0060 | 58.228 | 316 | 32 | 4 | 371 | 683 | 21 | 239 | 9.99e-108 | 327 |
MS.gene042355.t1 | MTR_2g014100 | 86.047 | 172 | 24 | 0 | 1 | 172 | 74 | 245 | 2.38e-103 | 317 |
MS.gene042355.t1 | MTR_0337s0040 | 76.562 | 192 | 45 | 0 | 4 | 195 | 30 | 221 | 2.95e-100 | 308 |
MS.gene042355.t1 | MTR_1g055240 | 87.324 | 142 | 18 | 0 | 27 | 168 | 3 | 144 | 1.25e-84 | 264 |
MS.gene042355.t1 | MTR_3g028680 | 81.013 | 158 | 27 | 1 | 542 | 696 | 1 | 158 | 2.94e-84 | 265 |
MS.gene042355.t1 | MTR_0019s0290 | 81.579 | 152 | 28 | 0 | 18 | 169 | 9 | 160 | 9.00e-84 | 262 |
MS.gene042355.t1 | MTR_3g008240 | 86.957 | 138 | 18 | 0 | 1 | 138 | 66 | 203 | 1.98e-81 | 258 |
MS.gene042355.t1 | MTR_2g067090 | 79.355 | 155 | 29 | 1 | 545 | 696 | 99 | 253 | 2.40e-77 | 250 |
MS.gene042355.t1 | MTR_4g040430 | 84.058 | 138 | 18 | 1 | 1 | 138 | 65 | 198 | 1.03e-75 | 242 |
MS.gene042355.t1 | MTR_4g133495 | 63.187 | 182 | 41 | 2 | 500 | 678 | 88 | 246 | 3.62e-67 | 223 |
MS.gene042355.t1 | MTR_4g133340 | 63.187 | 182 | 41 | 2 | 500 | 678 | 88 | 246 | 3.62e-67 | 223 |
MS.gene042355.t1 | MTR_5g071590 | 79.612 | 103 | 21 | 0 | 1 | 103 | 78 | 180 | 4.05e-54 | 184 |
MS.gene042355.t1 | MTR_6g051425 | 32.967 | 273 | 155 | 5 | 21 | 277 | 64 | 324 | 6.29e-36 | 139 |
MS.gene042355.t1 | MTR_1281s0010 | 79.365 | 63 | 13 | 0 | 1 | 63 | 47 | 109 | 8.22e-28 | 108 |
MS.gene042355.t1 | MTR_2g067130 | 61.728 | 81 | 25 | 2 | 619 | 696 | 46 | 123 | 4.14e-21 | 90.9 |
MS.gene042355.t1 | MTR_1g070355 | 26.794 | 209 | 135 | 3 | 21 | 227 | 119 | 311 | 4.86e-15 | 79.3 |
MS.gene042355.t1 | MTR_0337s0050 | 75.000 | 36 | 9 | 0 | 195 | 230 | 14 | 49 | 1.18e-13 | 67.0 |
MS.gene042355.t1 | MTR_0402s0040 | 27.966 | 118 | 84 | 1 | 52 | 169 | 89 | 205 | 4.11e-12 | 69.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene042355.t1 | AT4G38180 | 25.901 | 583 | 354 | 12 | 21 | 589 | 119 | 637 | 8.17e-60 | 216 |
MS.gene042355.t1 | AT4G15090 | 25.710 | 599 | 372 | 11 | 59 | 642 | 121 | 661 | 6.17e-54 | 199 |
MS.gene042355.t1 | AT4G15090 | 25.710 | 599 | 372 | 11 | 59 | 642 | 121 | 661 | 6.17e-54 | 199 |
MS.gene042355.t1 | AT4G15090 | 25.710 | 599 | 372 | 11 | 59 | 642 | 121 | 661 | 6.17e-54 | 199 |
MS.gene042355.t1 | AT4G15090 | 25.710 | 599 | 372 | 11 | 59 | 642 | 121 | 661 | 6.17e-54 | 199 |
MS.gene042355.t1 | AT4G15090 | 25.710 | 599 | 372 | 11 | 59 | 642 | 121 | 661 | 6.17e-54 | 199 |
MS.gene042355.t1 | AT2G27110 | 25.293 | 597 | 360 | 16 | 63 | 643 | 108 | 634 | 1.04e-47 | 181 |
MS.gene042355.t1 | AT2G27110 | 25.293 | 597 | 360 | 16 | 63 | 643 | 108 | 634 | 1.04e-47 | 181 |
MS.gene042355.t1 | AT2G27110 | 26.326 | 509 | 306 | 12 | 149 | 643 | 36 | 489 | 2.79e-47 | 179 |
MS.gene042355.t1 | AT1G76320 | 24.143 | 642 | 383 | 18 | 21 | 644 | 43 | 598 | 8.30e-45 | 171 |
MS.gene042355.t1 | AT1G76320 | 24.181 | 641 | 382 | 18 | 21 | 643 | 43 | 597 | 2.14e-44 | 171 |
MS.gene042355.t1 | AT1G76320 | 24.181 | 641 | 382 | 18 | 21 | 643 | 43 | 597 | 2.14e-44 | 171 |
MS.gene042355.t1 | AT1G76320 | 24.181 | 641 | 382 | 18 | 21 | 643 | 43 | 597 | 2.19e-44 | 171 |
MS.gene042355.t1 | AT3G06250 | 25.966 | 466 | 273 | 11 | 135 | 585 | 295 | 703 | 5.59e-43 | 167 |
MS.gene042355.t1 | AT3G06250 | 25.966 | 466 | 273 | 11 | 135 | 585 | 295 | 703 | 5.59e-43 | 167 |
MS.gene042355.t1 | AT3G06250 | 25.966 | 466 | 273 | 11 | 135 | 585 | 295 | 703 | 5.59e-43 | 167 |
MS.gene042355.t1 | AT3G22170 | 23.855 | 524 | 324 | 11 | 125 | 632 | 195 | 659 | 2.90e-41 | 162 |
MS.gene042355.t1 | AT3G22170 | 23.855 | 524 | 324 | 11 | 125 | 632 | 195 | 659 | 2.90e-41 | 162 |
MS.gene042355.t1 | AT4G38170 | 25.522 | 431 | 251 | 13 | 171 | 586 | 24 | 399 | 1.26e-40 | 157 |
MS.gene042355.t1 | AT5G18960 | 24.947 | 469 | 278 | 12 | 134 | 585 | 316 | 727 | 1.66e-38 | 153 |
MS.gene042355.t1 | AT5G18960 | 24.947 | 469 | 278 | 12 | 134 | 585 | 316 | 727 | 1.66e-38 | 153 |
MS.gene042355.t1 | AT1G10240 | 25.394 | 571 | 328 | 23 | 43 | 583 | 102 | 604 | 1.64e-34 | 140 |
MS.gene042355.t1 | AT1G10240 | 25.394 | 571 | 328 | 23 | 43 | 583 | 102 | 604 | 1.64e-34 | 140 |
MS.gene042355.t1 | AT5G28530 | 23.888 | 607 | 355 | 18 | 8 | 584 | 90 | 619 | 5.04e-34 | 139 |
MS.gene042355.t1 | AT5G28530 | 23.723 | 607 | 352 | 19 | 8 | 584 | 90 | 615 | 2.37e-33 | 137 |
MS.gene042355.t1 | AT5G28530 | 23.723 | 607 | 352 | 19 | 8 | 584 | 90 | 615 | 2.37e-33 | 137 |
MS.gene042355.t1 | AT2G32250 | 22.828 | 679 | 378 | 21 | 5 | 664 | 68 | 619 | 5.09e-32 | 133 |
MS.gene042355.t1 | AT2G32250 | 22.828 | 679 | 378 | 21 | 5 | 664 | 27 | 578 | 7.11e-32 | 133 |
MS.gene042355.t1 | AT2G32250 | 22.714 | 678 | 380 | 20 | 5 | 664 | 27 | 578 | 8.62e-32 | 132 |
MS.gene042355.t1 | AT2G32250 | 22.828 | 679 | 378 | 21 | 5 | 664 | 68 | 619 | 8.77e-32 | 132 |
MS.gene042355.t1 | AT2G32250 | 22.828 | 679 | 378 | 21 | 5 | 664 | 68 | 619 | 8.77e-32 | 132 |
MS.gene042355.t1 | AT2G32250 | 22.828 | 679 | 378 | 21 | 5 | 664 | 68 | 619 | 8.77e-32 | 132 |
MS.gene042355.t1 | AT2G32250 | 22.828 | 679 | 378 | 21 | 5 | 664 | 68 | 619 | 9.12e-32 | 132 |
MS.gene042355.t1 | AT2G32250 | 22.828 | 679 | 378 | 21 | 5 | 664 | 68 | 619 | 9.12e-32 | 132 |
MS.gene042355.t1 | AT1G80010 | 24.223 | 611 | 364 | 25 | 2 | 586 | 124 | 661 | 8.21e-30 | 126 |
MS.gene042355.t1 | AT1G52520 | 23.013 | 604 | 369 | 22 | 2 | 586 | 112 | 638 | 5.06e-28 | 120 |
MS.gene042355.t1 | AT4G19990 | 27.239 | 268 | 176 | 5 | 155 | 407 | 106 | 369 | 3.15e-22 | 102 |
MS.gene042355.t1 | AT4G19990 | 38.614 | 101 | 48 | 3 | 515 | 613 | 438 | 526 | 1.94e-12 | 71.2 |
MS.gene042355.t1 | AT4G19990 | 27.239 | 268 | 176 | 5 | 155 | 407 | 163 | 426 | 3.51e-22 | 102 |
MS.gene042355.t1 | AT4G19990 | 38.614 | 101 | 48 | 3 | 515 | 613 | 495 | 583 | 1.96e-12 | 71.2 |
MS.gene042355.t1 | AT4G19990 | 27.239 | 268 | 176 | 5 | 155 | 407 | 163 | 426 | 3.51e-22 | 102 |
MS.gene042355.t1 | AT4G19990 | 38.614 | 101 | 48 | 3 | 515 | 613 | 495 | 583 | 1.96e-12 | 71.2 |
MS.gene042355.t1 | AT4G19990 | 27.239 | 268 | 176 | 5 | 155 | 407 | 177 | 440 | 3.53e-22 | 102 |
MS.gene042355.t1 | AT4G19990 | 38.614 | 101 | 48 | 3 | 515 | 613 | 509 | 597 | 2.14e-12 | 71.2 |
MS.gene042355.t1 | AT4G19990 | 27.239 | 268 | 176 | 5 | 155 | 407 | 163 | 426 | 3.66e-22 | 102 |
MS.gene042355.t1 | AT4G19990 | 38.614 | 101 | 48 | 3 | 515 | 613 | 495 | 583 | 2.15e-12 | 71.2 |
MS.gene042355.t1 | AT4G19990 | 27.239 | 268 | 176 | 5 | 155 | 407 | 163 | 426 | 4.93e-22 | 102 |
MS.gene042355.t1 | AT4G19990 | 38.614 | 101 | 48 | 3 | 515 | 613 | 495 | 583 | 2.29e-12 | 70.9 |
MS.gene042355.t1 | AT4G19990 | 27.239 | 268 | 176 | 5 | 155 | 407 | 163 | 426 | 4.93e-22 | 102 |
MS.gene042355.t1 | AT4G19990 | 38.614 | 101 | 48 | 3 | 515 | 613 | 495 | 583 | 2.29e-12 | 70.9 |
Find 105 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 6.2:-79727390 | MS.gene042355:CDS |
AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 6.2:+79726255 | None:intergenic |
CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 6.2:-79727123 | MS.gene042355:CDS |
TACATTTCAGCTGCCTTTCT+TGG | 0.197151 | 6.2:-79727671 | MS.gene042355:intron |
CAACAAGATTATGCTCTATT+TGG | 0.198611 | 6.2:-79728194 | MS.gene042355:CDS |
CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 6.2:-79727638 | MS.gene042355:CDS |
TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 6.2:+79727544 | None:intergenic |
TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 6.2:+79726261 | None:intergenic |
GGTTTCAAATGTTGATGTTT+TGG | 0.317051 | 6.2:-79726826 | MS.gene042355:CDS |
TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 6.2:-79726409 | MS.gene042355:CDS |
ACCAGCCTGGTCTGTGTATA+TGG | 0.341000 | 6.2:+79727526 | None:intergenic |
GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 6.2:+79728144 | None:intergenic |
GAGGGATAATCATGCTGATT+TGG | 0.346844 | 6.2:-79727090 | MS.gene042355:CDS |
GTCTTTAGTGCCAACATTCA+TGG | 0.367086 | 6.2:+79726533 | None:intergenic |
TATGCATTGGTCTTCAGTTT+GGG | 0.370760 | 6.2:-79727249 | MS.gene042355:CDS |
CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 6.2:-79726417 | MS.gene042355:CDS |
AACAATAAATATCGGCCATT+AGG | 0.388497 | 6.2:-79728137 | MS.gene042355:intron |
TCATGCTGATTTGGACTTCA+AGG | 0.389304 | 6.2:-79727081 | MS.gene042355:CDS |
ACCGAACAAACAATAAATAT+CGG | 0.389395 | 6.2:-79728145 | MS.gene042355:CDS |
GTATGCATTGGTCTTCAGTT+TGG | 0.392120 | 6.2:-79727250 | MS.gene042355:CDS |
TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 6.2:+79728674 | None:intergenic |
AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 6.2:-79726269 | MS.gene042355:CDS |
TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 6.2:+79726279 | None:intergenic |
GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 6.2:-79726384 | MS.gene042355:CDS |
GGACCGCATAAGCTGACTAT+TGG | 0.410008 | 6.2:+79727028 | None:intergenic |
CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 6.2:-79726701 | MS.gene042355:CDS |
GATTATGATCTTCAAACCTT+GGG | 0.413114 | 6.2:+79726778 | None:intergenic |
GGGTTGTCACAGTCGACATT+AGG | 0.419786 | 6.2:-79726743 | MS.gene042355:CDS |
CGATTATGATCTTCAAACCT+TGG | 0.425681 | 6.2:+79726777 | None:intergenic |
CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 6.2:-79728497 | MS.gene042355:CDS |
AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 6.2:-79728615 | MS.gene042355:CDS |
GACCGCATAAGCTGACTATT+GGG | 0.435741 | 6.2:+79727029 | None:intergenic |
TGAATGTCTATAAGATATAT+AGG | 0.445219 | 6.2:-79728583 | MS.gene042355:CDS |
TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 6.2:+79727533 | None:intergenic |
GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 6.2:-79728632 | MS.gene042355:CDS |
CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 6.2:+79726600 | None:intergenic |
GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 6.2:-79728467 | MS.gene042355:CDS |
CTCCTCAAAATAGTATTTGA+AGG | 0.453936 | 6.2:+79726947 | None:intergenic |
CTCAAGTAGCGCAAATGCTC+TGG | 0.460440 | 6.2:+79728527 | None:intergenic |
ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 6.2:-79726700 | MS.gene042355:CDS |
GGCCTACTTCAGACTTTAAG+TGG | 0.462107 | 6.2:-79727295 | MS.gene042355:CDS |
CGCAAACACGTGTAGAAAGC+TGG | 0.465682 | 6.2:+79726466 | None:intergenic |
ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 6.2:-79728783 | MS.gene042355:CDS |
TTTGAGGAGGACACAACAAA+AGG | 0.469432 | 6.2:-79726933 | MS.gene042355:CDS |
GAAGTGATGGGTCAAGGAGT+TGG | 0.484292 | 6.2:-79728422 | MS.gene042355:CDS |
TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 6.2:+79728638 | None:intergenic |
CTGTCTGTGAACCATCTGTT+GGG | 0.487793 | 6.2:-79726308 | MS.gene042355:CDS |
TCTAATGACGACTCGTCAAA+AGG | 0.488508 | 6.2:-79728354 | MS.gene042355:CDS |
CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 6.2:-79728789 | MS.gene042355:CDS |
ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 6.2:+79727658 | None:intergenic |
CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 6.2:-79728341 | MS.gene042355:CDS |
ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 6.2:-79727109 | MS.gene042355:CDS |
TGGTCGTTGCTCATGGCACA+TGG | 0.496611 | 6.2:-79727459 | MS.gene042355:CDS |
GAGAACATCTTATGAAGTGA+TGG | 0.499875 | 6.2:-79728435 | MS.gene042355:CDS |
TGTCTTCTGCAACATCAACT+TGG | 0.500580 | 6.2:+79728249 | None:intergenic |
GCTGTCTGTGAACCATCTGT+TGG | 0.504047 | 6.2:-79726309 | MS.gene042355:CDS |
CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 6.2:-79727262 | MS.gene042355:CDS |
ATCATAATCGACTTGATGAA+AGG | 0.507955 | 6.2:-79726764 | MS.gene042355:CDS |
ATTGGTCTTCAGTTTGGGTG+AGG | 0.509410 | 6.2:-79727244 | MS.gene042355:CDS |
GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 6.2:+79726784 | None:intergenic |
CAAAATAGTATTTGAAGGAA+AGG | 0.519540 | 6.2:+79726952 | None:intergenic |
TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 6.2:+79727141 | None:intergenic |
TGTCTATAAGATATATAGGT+GGG | 0.523740 | 6.2:-79728579 | MS.gene042355:CDS |
TCATAATCGACTTGATGAAA+GGG | 0.526860 | 6.2:-79726763 | MS.gene042355:CDS |
TTGAGGAGGACACAACAAAA+GGG | 0.529908 | 6.2:-79726932 | MS.gene042355:CDS |
CTGAAATCTACCATGAATGT+TGG | 0.534154 | 6.2:-79726543 | MS.gene042355:CDS |
TAACAAAGAAGGTTTCAAGA+AGG | 0.538422 | 6.2:-79728738 | MS.gene042355:CDS |
AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 6.2:+79727146 | None:intergenic |
TGTTATGCTTGTAACAAAGA+AGG | 0.541604 | 6.2:-79728749 | MS.gene042355:CDS |
AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 6.2:-79728737 | MS.gene042355:CDS |
AAATGCTCTGGTTTATGTAA+TGG | 0.552634 | 6.2:+79728539 | None:intergenic |
ACTTCAACAACGCACCAGCC+TGG | 0.557139 | 6.2:+79727513 | None:intergenic |
GTGATGGGTCAAGGAGTTGG+AGG | 0.568802 | 6.2:-79728419 | MS.gene042355:CDS |
TACACGTGTTTGCGCAGATG+CGG | 0.571672 | 6.2:-79726457 | MS.gene042355:CDS |
TTTGGTGCAGTCCCAACAGA+TGG | 0.581566 | 6.2:+79726297 | None:intergenic |
TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 6.2:+79727007 | None:intergenic |
TAAAGACTTAGAAGGCGTAA+CGG | 0.587050 | 6.2:+79726341 | None:intergenic |
AATGAAGCTCTCTTGAAACC+AGG | 0.587890 | 6.2:-79728287 | MS.gene042355:CDS |
TCTTATGAAGTGATGGGTCA+AGG | 0.589029 | 6.2:-79728428 | MS.gene042355:CDS |
TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 6.2:-79726416 | MS.gene042355:CDS |
ACCATATACACAGACCAGGC+TGG | 0.590176 | 6.2:-79727527 | MS.gene042355:intron |
ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 6.2:-79726421 | MS.gene042355:CDS |
GAATGAATTCAAGGAATGAG+TGG | 0.593229 | 6.2:+79725714 | None:intergenic |
TTGAAGGAAACCTTTCCCCA+AGG | 0.600566 | 6.2:-79726794 | MS.gene042355:CDS |
TTGATATCGTTGTGCTTGAG+TGG | 0.601464 | 6.2:+79726509 | None:intergenic |
AGAACATCTTATGAAGTGAT+GGG | 0.601988 | 6.2:-79728434 | MS.gene042355:CDS |
GACGACTCGTCAAAAGGAGA+TGG | 0.604288 | 6.2:-79728348 | MS.gene042355:CDS |
ACGTGTTTGCGCAGATGCGG+AGG | 0.605934 | 6.2:-79726454 | MS.gene042355:CDS |
ATGTTGATAATGATAATGAG+AGG | 0.609132 | 6.2:-79726848 | MS.gene042355:CDS |
GACTCGTCAAAAGGAGATGG+TGG | 0.611157 | 6.2:-79728345 | MS.gene042355:CDS |
AGCCACTTAAAGTCTGAAGT+AGG | 0.617789 | 6.2:+79727293 | None:intergenic |
TGTTGATAATGATAATGAGA+GGG | 0.618346 | 6.2:-79726847 | MS.gene042355:CDS |
AGAACTGGACTGTCACATGT+TGG | 0.620791 | 6.2:+79728689 | None:intergenic |
ATCCCAATAGTCAGCTTATG+CGG | 0.628481 | 6.2:-79727031 | MS.gene042355:CDS |
ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 6.2:+79726779 | None:intergenic |
CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 6.2:-79727108 | MS.gene042355:CDS |
ATGTCTATAAGATATATAGG+TGG | 0.643489 | 6.2:-79728580 | MS.gene042355:CDS |
GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 6.2:+79726558 | None:intergenic |
GGTCGTTGCTCATGGCACAT+GGG | 0.654658 | 6.2:-79727458 | MS.gene042355:CDS |
TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 6.2:+79726987 | None:intergenic |
GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 6.2:-79726432 | MS.gene042355:CDS |
CATGTCGACATAAGAAACCC+CGG | 0.663279 | 6.2:+79726682 | None:intergenic |
TCAAACCATATACACAGACC+AGG | 0.671057 | 6.2:-79727531 | MS.gene042355:CDS |
TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 6.2:-79726699 | MS.gene042355:CDS |
GTCAATTCTGATGTAATGCG+CGG | 0.734639 | 6.2:-79725768 | MS.gene042355:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ACGTATTTATTATTATATTT+TGG | - | chr6.2:79728570-79728589 | MS.gene042355:CDS | 10.0% |
!!! | TGTTTTTTATGTTATAAGTT+AGG | - | chr6.2:79728399-79728418 | MS.gene042355:CDS | 15.0% |
!! | AAAACACCTTAAAAAACATT+CGG | + | chr6.2:79727046-79727065 | None:intergenic | 20.0% |
!! | AAACCAAATTAACAATCTAA+TGG | + | chr6.2:79728603-79728622 | None:intergenic | 20.0% |
!! | AAACCATAATTATGGTTTAA+TGG | + | chr6.2:79728646-79728665 | None:intergenic | 20.0% |
!! | AAACCATTAAACCATAATTA+TGG | - | chr6.2:79728640-79728659 | MS.gene042355:CDS | 20.0% |
!! | AAACCATTAGATTGTTAATT+TGG | - | chr6.2:79728597-79728616 | MS.gene042355:CDS | 20.0% |
!! | AATTCTTGATTGTTATGTAT+TGG | - | chr6.2:79728497-79728516 | MS.gene042355:CDS | 20.0% |
!! | CAATTCACAAAATAAGAAAT+CGG | - | chr6.2:79725739-79725758 | MS.gene042355:CDS | 20.0% |
!! | TCTTAACTAAACCATAATTA+TGG | + | chr6.2:79728654-79728673 | None:intergenic | 20.0% |
!! | TGAATGTCTATAAGATATAT+AGG | - | chr6.2:79725945-79725964 | MS.gene042355:intron | 20.0% |
!!! | AATTTAATGTTCTGGTTTAT+TGG | - | chr6.2:79726565-79726584 | MS.gene042355:CDS | 20.0% |
!!! | ATGATGAAAAACTGTTTTAA+TGG | - | chr6.2:79727208-79727227 | MS.gene042355:CDS | 20.0% |
!!! | TGAATGTTTATATTGATTGA+AGG | - | chr6.2:79726537-79726556 | MS.gene042355:CDS | 20.0% |
! | AAAGTGATTATGAAAAAGCT+AGG | - | chr6.2:79728298-79728317 | MS.gene042355:CDS | 25.0% |
! | AAGTACAAATACTAACCTAA+TGG | + | chr6.2:79726409-79726428 | None:intergenic | 25.0% |
! | AAGTGATTATGAAAAAGCTA+GGG | - | chr6.2:79728299-79728318 | MS.gene042355:CDS | 25.0% |
! | ACAAAATAAGAAATCGGATA+AGG | - | chr6.2:79725745-79725764 | MS.gene042355:CDS | 25.0% |
! | ACCGAACAAACAATAAATAT+CGG | - | chr6.2:79726383-79726402 | MS.gene042355:CDS | 25.0% |
! | ATGTCTATAAGATATATAGG+TGG | - | chr6.2:79725948-79725967 | MS.gene042355:intron | 25.0% |
! | CAAAATAGTATTTGAAGGAA+AGG | + | chr6.2:79727579-79727598 | None:intergenic | 25.0% |
! | CTTTAGTCATTTCAACATTA+TGG | - | chr6.2:79727405-79727424 | MS.gene042355:CDS | 25.0% |
! | TGAAATTTGAATGAATGTTC+TGG | - | chr6.2:79726455-79726474 | MS.gene042355:CDS | 25.0% |
! | TGAATAAATGAAAAGCAAGA+TGG | + | chr6.2:79727544-79727563 | None:intergenic | 25.0% |
! | TGTCTATAAGATATATAGGT+GGG | - | chr6.2:79725949-79725968 | MS.gene042355:intron | 25.0% |
! | TTTCGATGAGTTAACTAATT+TGG | - | chr6.2:79727138-79727157 | MS.gene042355:CDS | 25.0% |
!! | AGGTTTAGAATTTAATGTTC+TGG | - | chr6.2:79726557-79726576 | MS.gene042355:CDS | 25.0% |
!! | ATTTTCAATTCTGAGTTAAG+TGG | - | chr6.2:79728673-79728692 | MS.gene042355:CDS | 25.0% |
!! | CAAAGTTTTTACAATTGAGA+AGG | - | chr6.2:79727639-79727658 | MS.gene042355:CDS | 25.0% |
!! | CTATACATTTTCACATTTGT+TGG | - | chr6.2:79728542-79728561 | MS.gene042355:CDS | 25.0% |
!! | GAATCTTTCTTTTCGATTTT+CGG | - | chr6.2:79726138-79726157 | MS.gene042355:intron | 25.0% |
!! | TGTTGTATTTTGTTCTGATT+TGG | - | chr6.2:79726828-79726847 | MS.gene042355:CDS | 25.0% |
!! | TTCCTTCAAATACTATTTTG+AGG | - | chr6.2:79727579-79727598 | MS.gene042355:CDS | 25.0% |
!! | TTGGTTTGAATATTATCTTC+TGG | - | chr6.2:79728516-79728535 | MS.gene042355:CDS | 25.0% |
!!! | AAGACATAGCTAGTATTTTT+TGG | - | chr6.2:79726296-79726315 | MS.gene042355:CDS | 25.0% |
!!! | AATCAGATTTTGACTACAAT+TGG | - | chr6.2:79727179-79727198 | MS.gene042355:CDS | 25.0% |
!!! | AGACATAGCTAGTATTTTTT+GGG | - | chr6.2:79726297-79726316 | MS.gene042355:CDS | 25.0% |
!!! | ATCAGATTTTGACTACAATT+GGG | - | chr6.2:79727180-79727199 | MS.gene042355:CDS | 25.0% |
!!! | ATGTTGATAATGATAATGAG+AGG | - | chr6.2:79727680-79727699 | MS.gene042355:intron | 25.0% |
!!! | CTTATTTTGTGAATTGTTCT+TGG | + | chr6.2:79725735-79725754 | None:intergenic | 25.0% |
!!! | GCTTTAATAAATTCTAAAGC+TGG | - | chr6.2:79726061-79726080 | MS.gene042355:intron | 25.0% |
!!! | GTTTTTTAAGGTGTTTTTCA+TGG | - | chr6.2:79727049-79727068 | MS.gene042355:CDS | 25.0% |
!!! | TCAATTCCGAATGTTTTTTA+AGG | - | chr6.2:79727037-79727056 | MS.gene042355:CDS | 25.0% |
!!! | TGAAAAACTGTTTTAATGGA+AGG | - | chr6.2:79727212-79727231 | MS.gene042355:CDS | 25.0% |
!!! | TGTTGATAATGATAATGAGA+GGG | - | chr6.2:79727681-79727700 | MS.gene042355:intron | 25.0% |
AAACACATATGATCTTTCCA+TGG | + | chr6.2:79726628-79726647 | None:intergenic | 30.0% | |
AACAAAGAAGGTTTCAAGAA+GGG | - | chr6.2:79725791-79725810 | MS.gene042355:intron | 30.0% | |
AACAATAAATATCGGCCATT+AGG | - | chr6.2:79726391-79726410 | MS.gene042355:CDS | 30.0% | |
AAGAAAGACCAAATCCAATT+AGG | - | chr6.2:79728259-79728278 | MS.gene042355:CDS | 30.0% | |
AGAACATCTTATGAAGTGAT+GGG | - | chr6.2:79726094-79726113 | MS.gene042355:intron | 30.0% | |
ATGATTGTCAAAACCAAGAA+AGG | + | chr6.2:79726873-79726892 | None:intergenic | 30.0% | |
ATTATGATCTTCAAACCTTG+GGG | + | chr6.2:79727752-79727771 | None:intergenic | 30.0% | |
CAACAAGATTATGCTCTATT+TGG | - | chr6.2:79726334-79726353 | MS.gene042355:CDS | 30.0% | |
CACAAATTCTAAGTCAAGAT+AGG | + | chr6.2:79726595-79726614 | None:intergenic | 30.0% | |
CTCCTCAAAATAGTATTTGA+AGG | + | chr6.2:79727584-79727603 | None:intergenic | 30.0% | |
CTGGTATATGTGTGTTAATT+TGG | - | chr6.2:79726494-79726513 | MS.gene042355:CDS | 30.0% | |
GAGAATGCAAAGAAAAATCT+CGG | - | chr6.2:79727094-79727113 | MS.gene042355:CDS | 30.0% | |
GATTATGATCTTCAAACCTT+GGG | + | chr6.2:79727753-79727772 | None:intergenic | 30.0% | |
GCCGATATTTATTGTTTGTT+CGG | + | chr6.2:79726387-79726406 | None:intergenic | 30.0% | |
TAAAGAAAAACCAGAGGAAA+GGG | - | chr6.2:79725880-79725899 | MS.gene042355:intron | 30.0% | |
TAAAGAATCGAACAAGTGAA+TGG | + | chr6.2:79727390-79727409 | None:intergenic | 30.0% | |
TAACAAAGAAGGTTTCAAGA+AGG | - | chr6.2:79725790-79725809 | MS.gene042355:intron | 30.0% | |
TGGATATCATAGTAAAAACC+TGG | + | chr6.2:79726262-79726281 | None:intergenic | 30.0% | |
TGGTGTATACTTGTTTACTA+CGG | + | chr6.2:79727524-79727543 | None:intergenic | 30.0% | |
TGTTATGCTTGTAACAAAGA+AGG | - | chr6.2:79725779-79725798 | MS.gene042355:CDS | 30.0% | |
TTCTTTGACCTAATTGGATT+TGG | + | chr6.2:79728270-79728289 | None:intergenic | 30.0% | |
TTTCTATTTACACAGCACAA+TGG | - | chr6.2:79726786-79726805 | MS.gene042355:CDS | 30.0% | |
! | AAATGCTCTGGTTTATGTAA+TGG | + | chr6.2:79725992-79726011 | None:intergenic | 30.0% |
! | AGCTGGAATATATTTGAAGT+TGG | - | chr6.2:79725913-79725932 | MS.gene042355:intron | 30.0% |
! | GCATCTGAAATATTTCTCAA+CGG | - | chr6.2:79728096-79728115 | MS.gene042355:intron | 30.0% |
! | GGTTTCAAATGTTGATGTTT+TGG | - | chr6.2:79727702-79727721 | MS.gene042355:intron | 30.0% |
! | TATGGTTTGAGGTTTCTTAT+TGG | + | chr6.2:79726987-79727006 | None:intergenic | 30.0% |
! | TGAGGCTTTAACAATTTAAG+CGG | - | chr6.2:79728368-79728387 | MS.gene042355:CDS | 30.0% |
! | TTTGGTCTTTCTTTGAACTT+TGG | + | chr6.2:79728252-79728271 | None:intergenic | 30.0% |
!! | ACTGCTTTTAAAGACTTAGA+AGG | + | chr6.2:79728198-79728217 | None:intergenic | 30.0% |
!! | ATCATAATCGACTTGATGAA+AGG | - | chr6.2:79727764-79727783 | MS.gene042355:intron | 30.0% |
!! | ATGTTCTGGTTTAGAATTGA+AGG | - | chr6.2:79726469-79726488 | MS.gene042355:CDS | 30.0% |
!! | CTTCAAATACTATTTTGAGG+AGG | - | chr6.2:79727582-79727601 | MS.gene042355:CDS | 30.0% |
!! | GAGGAGTTTCTTATTTCTAA+AGG | - | chr6.2:79728144-79728163 | MS.gene042355:CDS | 30.0% |
!! | TCATAATCGACTTGATGAAA+GGG | - | chr6.2:79727765-79727784 | MS.gene042355:intron | 30.0% |
!! | TCGACATGTTTTCAAGATTT+TGG | - | chr6.2:79727861-79727880 | MS.gene042355:intron | 30.0% |
!!! | CGAGGTTTTAACTAAAAAAG+CGG | - | chr6.2:79728430-79728449 | MS.gene042355:CDS | 30.0% |
!!! | CTGCACAATATGTTTTAAAG+CGG | - | chr6.2:79727929-79727948 | MS.gene042355:intron | 30.0% |
!!! | TTCAAGATTTTGGAGTTCTT+AGG | - | chr6.2:79727871-79727890 | MS.gene042355:intron | 30.0% |
ACATTATGGTTCAGAGAATG+AGG | - | chr6.2:79727419-79727438 | MS.gene042355:CDS | 35.0% | |
ATAAGTTAGGAAAGATGACG+AGG | - | chr6.2:79728412-79728431 | MS.gene042355:CDS | 35.0% | |
CATTATGGTTCAGAGAATGA+GGG | - | chr6.2:79727420-79727439 | MS.gene042355:CDS | 35.0% | |
CGAGAAGTAAATGAAGTTCA+AGG | - | chr6.2:79726031-79726050 | MS.gene042355:intron | 35.0% | |
CGATTATGATCTTCAAACCT+TGG | + | chr6.2:79727754-79727773 | None:intergenic | 35.0% | |
CTAAAGAAAAACCAGAGGAA+AGG | - | chr6.2:79725879-79725898 | MS.gene042355:intron | 35.0% | |
CTCATTCAAATCGTATGCAT+TGG | - | chr6.2:79727266-79727285 | MS.gene042355:CDS | 35.0% | |
CTGAAATCTACCATGAATGT+TGG | - | chr6.2:79727985-79728004 | MS.gene042355:intron | 35.0% | |
GAAAGCTAAAGAAAAACCAG+AGG | - | chr6.2:79725874-79725893 | MS.gene042355:intron | 35.0% | |
GAAGCAAAAGAAAGATGATG+AGG | - | chr6.2:79728350-79728369 | MS.gene042355:CDS | 35.0% | |
GACAGAAATTCCTTATAGCT+CGG | - | chr6.2:79728325-79728344 | MS.gene042355:CDS | 35.0% | |
GAGAACATCTTATGAAGTGA+TGG | - | chr6.2:79726093-79726112 | MS.gene042355:intron | 35.0% | |
GTCTGCTTAATCCTAAAAAC+AGG | - | chr6.2:79725816-79725835 | MS.gene042355:intron | 35.0% | |
TTCTCATACTCAACAAGAAC+TGG | + | chr6.2:79725857-79725876 | None:intergenic | 35.0% | |
! | CATCGTAAGAGTGTGTTATT+TGG | - | chr6.2:79726890-79726909 | MS.gene042355:CDS | 35.0% |
! | GAGGCTTTAACAATTTAAGC+GGG | - | chr6.2:79728369-79728388 | MS.gene042355:CDS | 35.0% |
! | TAAAGACTTAGAAGGCGTAA+CGG | + | chr6.2:79728190-79728209 | None:intergenic | 35.0% |
! | TCTTTCAATGCTTTTCTTCG+TGG | - | chr6.2:79727349-79727368 | MS.gene042355:CDS | 35.0% |
!! | CGCTTTAAAACATATTGTGC+AGG | + | chr6.2:79727931-79727950 | None:intergenic | 35.0% |
!! | TATGCATTGGTCTTCAGTTT+GGG | - | chr6.2:79727279-79727298 | MS.gene042355:CDS | 35.0% |
!!! | AAGATTTTGGAGTTCTTAGG+AGG | - | chr6.2:79727874-79727893 | MS.gene042355:intron | 35.0% |
!!! | AGACATCAGCTACTTTTGAT+TGG | - | chr6.2:79726933-79726952 | MS.gene042355:CDS | 35.0% |
!!! | CACAATATGTTTTAAAGCGG+TGG | - | chr6.2:79727932-79727951 | MS.gene042355:intron | 35.0% |
AATCGAACAAGTGAATGGTC+TGG | + | chr6.2:79727385-79727404 | None:intergenic | 40.0% | |
AATGAAGCTCTCTTGAAACC+AGG | - | chr6.2:79726241-79726260 | MS.gene042355:intron | 40.0% | |
ACCTATGATCTTTGCATAGC+TGG | + | chr6.2:79726726-79726745 | None:intergenic | 40.0% | |
AGTCGCTTCTTTGACCTAAT+TGG | + | chr6.2:79728276-79728295 | None:intergenic | 40.0% | |
ATCCCAATAGTCAGCTTATG+CGG | - | chr6.2:79727497-79727516 | MS.gene042355:intron | 40.0% | |
ATGTCGTATGTTTGAGAACC+GGG | - | chr6.2:79727828-79727847 | MS.gene042355:intron | 40.0% | |
ATTTCTCAACGGTGTTCTTG+AGG | - | chr6.2:79728107-79728126 | MS.gene042355:intron | 40.0% | |
CATGTCGTATGTTTGAGAAC+CGG | - | chr6.2:79727827-79727846 | MS.gene042355:intron | 40.0% | |
GATTTCAGCTTATCGACAGA+CGG | + | chr6.2:79727973-79727992 | None:intergenic | 40.0% | |
GTCAATTCTGATGTAATGCG+CGG | - | chr6.2:79728760-79728779 | MS.gene042355:CDS | 40.0% | |
GTCTTTAGTGCCAACATTCA+TGG | + | chr6.2:79727998-79728017 | None:intergenic | 40.0% | |
TACATTTCAGCTGCCTTTCT+TGG | - | chr6.2:79726857-79726876 | MS.gene042355:CDS | 40.0% | |
TCAAACCATATACACAGACC+AGG | - | chr6.2:79726997-79727016 | MS.gene042355:CDS | 40.0% | |
TCCAGCTATGCAAAGATCAT+AGG | - | chr6.2:79726722-79726741 | MS.gene042355:CDS | 40.0% | |
TCTAATGACGACTCGTCAAA+AGG | - | chr6.2:79726174-79726193 | MS.gene042355:intron | 40.0% | |
TGGTCTGTGTATATGGTTTG+AGG | + | chr6.2:79726998-79727017 | None:intergenic | 40.0% | |
TGTCTTCTGCAACATCAACT+TGG | + | chr6.2:79726282-79726301 | None:intergenic | 40.0% | |
TTGAGGAGGACACAACAAAA+GGG | - | chr6.2:79727596-79727615 | MS.gene042355:CDS | 40.0% | |
TTGATATCGTTGTGCTTGAG+TGG | + | chr6.2:79728022-79728041 | None:intergenic | 40.0% | |
TTTGAGGAGGACACAACAAA+AGG | - | chr6.2:79727595-79727614 | MS.gene042355:CDS | 40.0% | |
TTTGCTTCTTCCGAGCTATA+AGG | + | chr6.2:79728338-79728357 | None:intergenic | 40.0% | |
! | AGCCACTTAAAGTCTGAAGT+AGG | + | chr6.2:79727238-79727257 | None:intergenic | 40.0% |
! | GAGGGATAATCATGCTGATT+TGG | - | chr6.2:79727438-79727457 | MS.gene042355:CDS | 40.0% |
! | TGGTTTAGAATTGAAGGCTC+TGG | - | chr6.2:79726475-79726494 | MS.gene042355:CDS | 40.0% |
! | TTTTTCATGGTCGTTGCTCA+TGG | - | chr6.2:79727062-79727081 | MS.gene042355:CDS | 40.0% |
!! | GTATGCATTGGTCTTCAGTT+TGG | - | chr6.2:79727278-79727297 | MS.gene042355:CDS | 40.0% |
!! | GTTTTGGATGCAGAACTTGA+AGG | - | chr6.2:79727718-79727737 | MS.gene042355:intron | 40.0% |
!! | TCACATGTTGGCCTGTTTTT+AGG | + | chr6.2:79725830-79725849 | None:intergenic | 40.0% |
!! | TCATGCTGATTTGGACTTCA+AGG | - | chr6.2:79727447-79727466 | MS.gene042355:CDS | 40.0% |
!! | TCTTATGAAGTGATGGGTCA+AGG | - | chr6.2:79726100-79726119 | MS.gene042355:intron | 40.0% |
!!! | GCTAGTATTTTTTGGGCAGA+TGG | - | chr6.2:79726304-79726323 | MS.gene042355:CDS | 40.0% |
AGAACTGGACTGTCACATGT+TGG | + | chr6.2:79725842-79725861 | None:intergenic | 45.0% | |
ATTTGTGCTCTGTACAGCCA+TGG | - | chr6.2:79726608-79726627 | MS.gene042355:CDS | 45.0% | |
CATGTCGACATAAGAAACCC+CGG | + | chr6.2:79727849-79727868 | None:intergenic | 45.0% | |
CTGTCTGTGAACCATCTGTT+GGG | - | chr6.2:79728220-79728239 | MS.gene042355:CDS | 45.0% | |
GAAAAACCAGAGGAAAGGGT+TGG | - | chr6.2:79725884-79725903 | MS.gene042355:intron | 45.0% | |
GACCGCATAAGCTGACTATT+GGG | + | chr6.2:79727502-79727521 | None:intergenic | 45.0% | |
GATCTTCAAACCTTGGGGAA+AGG | + | chr6.2:79727747-79727766 | None:intergenic | 45.0% | |
GGCCTACTTCAGACTTTAAG+TGG | - | chr6.2:79727233-79727252 | MS.gene042355:CDS | 45.0% | |
TGTCGTATGTTTGAGAACCG+GGG | - | chr6.2:79727829-79727848 | MS.gene042355:intron | 45.0% | |
TGTTCTTGAGGCAGGGAAAA+AGG | - | chr6.2:79728119-79728138 | MS.gene042355:intron | 45.0% | |
TTACAACCAACCCTTTCCTC+TGG | + | chr6.2:79725893-79725912 | None:intergenic | 45.0% | |
TTGAAGGAAACCTTTCCCCA+AGG | - | chr6.2:79727734-79727753 | MS.gene042355:intron | 45.0% | |
! | GTGAGGTCACATTTTACAGC+TGG | - | chr6.2:79727301-79727320 | MS.gene042355:CDS | 45.0% |
!! | ATTGGTCTTCAGTTTGGGTG+AGG | - | chr6.2:79727284-79727303 | MS.gene042355:CDS | 45.0% |
!! | GAAAGGGTTGGTTGTAAAGC+TGG | - | chr6.2:79725896-79725915 | MS.gene042355:intron | 45.0% |
ACCAGCCTGGTCTGTGTATA+TGG | + | chr6.2:79727005-79727024 | None:intergenic | 50.0% | |
ACCATATACACAGACCAGGC+TGG | - | chr6.2:79727001-79727020 | MS.gene042355:CDS | 50.0% | |
CGCAAACACGTGTAGAAAGC+TGG | + | chr6.2:79728065-79728084 | None:intergenic | 50.0% | |
CTCAAGTAGCGCAAATGCTC+TGG | + | chr6.2:79726004-79726023 | None:intergenic | 50.0% | |
GACGACTCGTCAAAAGGAGA+TGG | - | chr6.2:79726180-79726199 | MS.gene042355:intron | 50.0% | |
GACTCGTCAAAAGGAGATGG+TGG | - | chr6.2:79726183-79726202 | MS.gene042355:intron | 50.0% | |
GCTGTCTGTGAACCATCTGT+TGG | - | chr6.2:79728219-79728238 | MS.gene042355:CDS | 50.0% | |
GGACCGCATAAGCTGACTAT+TGG | + | chr6.2:79727503-79727522 | None:intergenic | 50.0% | |
GGGTTGTCACAGTCGACATT+AGG | - | chr6.2:79727785-79727804 | MS.gene042355:intron | 50.0% | |
TACACGTGTTTGCGCAGATG+CGG | - | chr6.2:79728071-79728090 | MS.gene042355:intron | 50.0% | |
TCAACGGTGTTCTTGAGGCA+GGG | - | chr6.2:79728112-79728131 | MS.gene042355:intron | 50.0% | |
! | TTTGGTGCAGTCCCAACAGA+TGG | + | chr6.2:79728234-79728253 | None:intergenic | 50.0% |
!! | GAAGTGATGGGTCAAGGAGT+TGG | - | chr6.2:79726106-79726125 | MS.gene042355:intron | 50.0% |
ACTTCAACAACGCACCAGCC+TGG | + | chr6.2:79727018-79727037 | None:intergenic | 55.0% | |
CTCAACGGTGTTCTTGAGGC+AGG | - | chr6.2:79728111-79728130 | MS.gene042355:intron | 55.0% | |
GGTCGTTGCTCATGGCACAT+GGG | - | chr6.2:79727070-79727089 | MS.gene042355:CDS | 55.0% | |
TGAGGCAGGGAAAAAGGCAG+AGG | - | chr6.2:79728125-79728144 | MS.gene042355:intron | 55.0% | |
TGGTCGTTGCTCATGGCACA+TGG | - | chr6.2:79727069-79727088 | MS.gene042355:CDS | 55.0% | |
! | CGTCAAAAGGAGATGGTGGC+TGG | - | chr6.2:79726187-79726206 | MS.gene042355:intron | 55.0% |
!! | GTGATGGGTCAAGGAGTTGG+AGG | - | chr6.2:79726109-79726128 | MS.gene042355:intron | 55.0% |
ACGTGTTTGCGCAGATGCGG+AGG | - | chr6.2:79728074-79728093 | MS.gene042355:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 79725722 | 79728828 | 79725722 | ID=MS.gene042355 |
chr6.2 | mRNA | 79725722 | 79728828 | 79725722 | ID=MS.gene042355.t1;Parent=MS.gene042355 |
chr6.2 | exon | 79728138 | 79728828 | 79728138 | ID=MS.gene042355.t1.exon1;Parent=MS.gene042355.t1 |
chr6.2 | CDS | 79728138 | 79728828 | 79728138 | ID=cds.MS.gene042355.t1;Parent=MS.gene042355.t1 |
chr6.2 | exon | 79727528 | 79727683 | 79727528 | ID=MS.gene042355.t1.exon2;Parent=MS.gene042355.t1 |
chr6.2 | CDS | 79727528 | 79727683 | 79727528 | ID=cds.MS.gene042355.t1;Parent=MS.gene042355.t1 |
chr6.2 | exon | 79726250 | 79727491 | 79726250 | ID=MS.gene042355.t1.exon3;Parent=MS.gene042355.t1 |
chr6.2 | CDS | 79726250 | 79727491 | 79726250 | ID=cds.MS.gene042355.t1;Parent=MS.gene042355.t1 |
chr6.2 | exon | 79725722 | 79725798 | 79725722 | ID=MS.gene042355.t1.exon4;Parent=MS.gene042355.t1 |
chr6.2 | CDS | 79725722 | 79725798 | 79725722 | ID=cds.MS.gene042355.t1;Parent=MS.gene042355.t1 |
Gene Sequence |
Protein sequence |