AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene042508

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene042508.t1 MTR_7g086960 97.207 358 8 1 1 358 1 356 0.0 706
MS.gene042508.t1 MTR_6g027370 50.779 321 131 7 34 354 52 345 1.98e-81 252
MS.gene042508.t1 MTR_4g082040 41.389 360 132 9 64 355 78 426 9.25e-76 240
MS.gene042508.t1 MTR_5g041570 63.804 163 53 1 84 246 127 283 8.15e-71 228
MS.gene042508.t1 MTR_3g089045 43.110 283 150 4 86 358 11 292 1.39e-62 202
MS.gene042508.t1 MTR_6g027360 46.209 277 95 11 86 353 74 305 5.30e-61 198
MS.gene042508.t1 MTR_6g074860 73.214 112 30 0 88 199 1 112 8.09e-61 196
MS.gene042508.t1 MTR_6g027340 57.143 119 51 0 90 208 15 133 2.51e-46 157
MS.gene042508.t1 MTR_4g019370 58.416 101 42 0 91 191 38 138 1.81e-39 143
MS.gene042508.t1 MTR_5g016510 46.617 133 62 2 91 223 5 128 9.10e-38 138
MS.gene042508.t1 MTR_4g094982 55.446 101 45 0 91 191 5 105 3.81e-37 135
MS.gene042508.t1 MTR_3g101290 55.446 101 45 0 91 191 37 137 5.53e-36 130
MS.gene042508.t1 MTR_1g026870 44.444 135 70 2 61 191 52 185 1.81e-32 129
MS.gene042508.t1 MTR_6g015455 50.495 101 50 0 91 191 5 105 2.56e-32 128
MS.gene042508.t1 MTR_3g110028 42.963 135 72 2 61 191 52 185 3.14e-32 128
MS.gene042508.t1 MTR_7g061330 53.465 101 47 0 91 191 113 213 5.34e-32 126
MS.gene042508.t1 MTR_7g461410 53.465 101 47 0 91 191 113 213 5.34e-32 126
MS.gene042508.t1 MTR_7g061330 53.465 101 47 0 91 191 77 177 9.39e-32 125
MS.gene042508.t1 MTR_5g082910 52.632 95 45 0 91 185 19 113 4.14e-31 119
MS.gene042508.t1 MTR_3g463400 52.941 102 48 0 91 192 133 234 1.56e-30 121
MS.gene042508.t1 MTR_5g070020 42.208 154 85 1 86 239 117 266 1.97e-30 119
MS.gene042508.t1 MTR_5g049190 49.020 102 52 0 91 192 19 120 2.66e-28 110
MS.gene042508.t1 MTR_3g077650 40.506 158 91 2 91 248 181 335 2.87e-28 114
MS.gene042508.t1 MTR_7g451170 40.278 144 75 2 50 191 157 291 2.26e-27 112
MS.gene042508.t1 MTR_7g037260 49.505 101 51 0 91 191 145 245 3.27e-27 110
MS.gene042508.t1 MTR_3g461490 46.078 102 54 1 91 191 14 115 2.55e-26 107
MS.gene042508.t1 MTR_4g105660 40.476 126 75 0 91 216 180 305 3.50e-26 108
MS.gene042508.t1 MTR_7g035350 33.178 214 113 5 94 283 228 435 3.66e-26 108
MS.gene042508.t1 MTR_5g010650 52.174 92 44 0 94 185 113 204 3.91e-26 108
MS.gene042508.t1 MTR_3g052450 44.545 110 60 1 91 199 42 151 4.19e-26 109
MS.gene042508.t1 MTR_0008s0390 48.039 102 52 1 91 191 15 116 4.84e-26 105
MS.gene042508.t1 MTR_3g052430 44.545 110 60 1 91 199 43 152 8.26e-26 108
MS.gene042508.t1 MTR_4g088015 48.039 102 52 1 91 192 221 321 1.05e-25 107
MS.gene042508.t1 MTR_0008s0470 48.039 102 52 1 91 191 15 116 1.39e-25 104
MS.gene042508.t1 MTR_0251s0050 37.500 144 87 2 91 231 15 158 3.96e-25 103
MS.gene042508.t1 MTR_2g089450 47.059 102 51 2 91 190 14 114 4.53e-25 102
MS.gene042508.t1 MTR_1g100653 43.810 105 58 1 91 194 14 118 5.72e-25 103
MS.gene042508.t1 MTR_1g100667 46.602 103 52 2 91 191 15 116 8.13e-25 102
MS.gene042508.t1 MTR_2g089420 46.602 103 52 2 91 191 13 114 1.08e-24 104
MS.gene042508.t1 MTR_5g042030 45.098 102 55 1 91 191 9 110 1.35e-24 102
MS.gene042508.t1 MTR_8g060940 48.000 100 51 1 91 189 9 108 1.89e-24 100
MS.gene042508.t1 MTR_8g042410 40.602 133 76 2 68 199 18 148 3.63e-24 103
MS.gene042508.t1 MTR_7g037130 48.958 96 49 0 91 186 145 240 3.69e-24 102
MS.gene042508.t1 MTR_2g067420 48.454 97 49 1 91 186 16 112 4.11e-24 101
MS.gene042508.t1 MTR_7g450950 43.103 116 57 1 71 186 146 252 4.16e-24 101
MS.gene042508.t1 MTR_5g079220 44.118 102 56 1 91 191 23 124 4.60e-24 100
MS.gene042508.t1 MTR_6g055910 42.718 103 56 2 91 191 16 117 8.91e-24 99.8
MS.gene042508.t1 MTR_3g074520 43.103 116 58 3 83 191 1 115 1.02e-23 100
MS.gene042508.t1 MTR_7g017260 40.496 121 69 1 74 191 10 130 1.02e-23 99.4
MS.gene042508.t1 MTR_3g011610 42.727 110 62 1 91 199 39 148 1.37e-23 102
MS.gene042508.t1 MTR_7g110830 31.383 188 118 4 85 266 8 190 1.78e-23 100
MS.gene042508.t1 MTR_4g100720 41.748 103 59 1 90 191 14 116 1.82e-23 95.9
MS.gene042508.t1 MTR_4g091490 46.078 102 54 1 91 191 15 116 2.65e-23 99.8
MS.gene042508.t1 MTR_5g078860 44.118 102 56 1 91 191 9 110 3.02e-23 98.6
MS.gene042508.t1 MTR_1g057980 47.872 94 49 0 91 184 80 173 3.19e-23 98.2
MS.gene042508.t1 MTR_0001s0360 43.137 102 57 1 91 191 9 110 3.23e-23 97.4
MS.gene042508.t1 MTR_2g088170 45.238 126 62 3 76 199 20 140 4.22e-23 100
MS.gene042508.t1 MTR_5g078800 43.137 102 57 1 91 191 9 110 5.29e-23 97.1
MS.gene042508.t1 MTR_1g085640 39.344 122 73 1 85 205 8 129 5.54e-23 99.4
MS.gene042508.t1 MTR_1g043080 43.137 102 57 1 91 191 14 115 6.03e-23 96.7
MS.gene042508.t1 MTR_7g115650 45.098 102 55 1 91 191 14 115 6.41e-23 95.5
MS.gene042508.t1 MTR_8g017440 42.241 116 59 3 83 191 1 115 6.42e-23 98.2
MS.gene042508.t1 MTR_1g076150 44.660 103 54 2 91 191 14 115 7.74e-23 96.7
MS.gene042508.t1 MTR_4g105130 34.375 160 96 3 91 248 14 166 7.88e-23 98.2
MS.gene042508.t1 MTR_5g079290 42.157 102 58 1 91 191 19 120 9.30e-23 96.3
MS.gene042508.t1 MTR_3g077110 33.173 208 115 7 91 284 14 211 9.97e-23 97.8
MS.gene042508.t1 MTR_0063s0090 37.903 124 69 3 91 212 14 131 1.46e-22 94.7
MS.gene042508.t1 MTR_2g089620 46.078 102 54 1 91 191 14 115 2.23e-22 96.7
MS.gene042508.t1 MTR_6g009430 43.137 102 57 1 91 191 14 115 2.30e-22 96.7
MS.gene042508.t1 MTR_2g011660 44.118 102 56 1 91 191 15 116 2.46e-22 96.7
MS.gene042508.t1 MTR_4g063100 42.342 111 60 3 87 195 5 113 2.79e-22 94.7
MS.gene042508.t1 MTR_1g085040 38.211 123 73 2 85 205 8 129 2.83e-22 97.1
MS.gene042508.t1 MTR_2g064160 42.718 103 56 2 91 191 13 114 2.86e-22 95.9
MS.gene042508.t1 MTR_5g078910 42.157 102 58 1 91 191 9 110 2.94e-22 95.9
MS.gene042508.t1 MTR_1g021230 43.636 110 61 1 91 199 59 168 3.72e-22 97.4
MS.gene042508.t1 MTR_1g083630 36.765 136 85 1 91 225 14 149 3.73e-22 98.2
MS.gene042508.t1 MTR_4g073420 31.183 186 114 5 83 259 1 181 4.49e-22 95.1
MS.gene042508.t1 MTR_1g112760 38.983 118 69 2 91 206 15 131 4.88e-22 93.6
MS.gene042508.t1 MTR_5g010020 43.519 108 55 2 83 184 1 108 7.78e-22 95.1
MS.gene042508.t1 MTR_5g078950 43.299 97 54 1 91 186 9 105 8.10e-22 94.0
MS.gene042508.t1 MTR_5g079670 41.748 103 59 1 90 191 12 114 1.00e-21 92.4
MS.gene042508.t1 MTR_5g014990 41.964 112 58 3 91 195 14 125 1.02e-21 94.4
MS.gene042508.t1 MTR_8g017540 36.364 143 71 4 68 191 20 161 1.34e-21 95.5
MS.gene042508.t1 MTR_1g110460 31.792 173 102 5 91 248 28 199 1.42e-21 94.0
MS.gene042508.t1 MTR_4g065017 34.194 155 78 3 91 240 19 154 1.82e-21 94.0
MS.gene042508.t1 MTR_1g062940 34.783 161 94 5 91 246 8 162 1.90e-21 91.7
MS.gene042508.t1 MTR_8g095390 39.130 115 64 2 83 191 1 115 1.92e-21 93.6
MS.gene042508.t1 MTR_5g007370 43.689 103 55 2 91 191 14 115 2.17e-21 93.2
MS.gene042508.t1 MTR_2g099740 43.119 109 54 3 83 184 1 108 2.22e-21 94.7
MS.gene042508.t1 MTR_2g097910 43.689 103 55 2 91 191 22 123 2.27e-21 93.6
MS.gene042508.t1 MTR_4g097570 45.918 98 50 2 91 185 14 111 2.31e-21 93.2
MS.gene042508.t1 MTR_4g125520 39.130 115 64 2 83 191 1 115 2.65e-21 93.2
MS.gene042508.t1 MTR_5g029840 39.130 115 64 2 83 191 1 115 3.08e-21 93.6
MS.gene042508.t1 MTR_7g096930 42.718 103 56 2 91 191 14 115 3.67e-21 92.4
MS.gene042508.t1 MTR_1g017000 42.718 103 57 2 91 191 14 116 4.23e-21 91.7
MS.gene042508.t1 MTR_7g010210 38.889 108 65 1 91 197 14 121 4.35e-21 92.8
MS.gene042508.t1 MTR_3g103570 39.496 119 66 3 91 203 14 132 4.62e-21 93.2
MS.gene042508.t1 MTR_8g098860 41.509 106 61 1 91 195 14 119 4.90e-21 92.8
MS.gene042508.t1 MTR_2g096380 34.615 156 90 4 91 244 8 153 5.08e-21 90.9
MS.gene042508.t1 MTR_7g010210 40.196 102 60 1 91 191 14 115 5.64e-21 91.7
MS.gene042508.t1 MTR_0247s0040 45.263 95 51 1 91 184 9 103 5.76e-21 89.4
MS.gene042508.t1 MTR_4g057635 44.231 104 54 3 91 191 14 116 5.99e-21 92.4
MS.gene042508.t1 MTR_4g082230 40.000 115 63 2 83 191 1 115 6.26e-21 93.6
MS.gene042508.t1 MTR_7g111290 42.718 103 56 2 85 185 8 109 6.80e-21 93.2
MS.gene042508.t1 MTR_3g097450 32.759 174 89 6 83 248 1 154 8.99e-21 91.7
MS.gene042508.t1 MTR_5g062790 44.898 98 52 2 91 186 11 108 9.13e-21 91.7
MS.gene042508.t1 MTR_8g017390 41.026 117 60 4 83 191 1 116 1.24e-20 93.2
MS.gene042508.t1 MTR_8g006470 45.714 105 55 2 91 193 12 116 1.48e-20 90.9
MS.gene042508.t1 MTR_0008s0280 41.237 97 54 2 91 185 14 109 1.53e-20 89.4
MS.gene042508.t1 MTR_8g017500 42.718 103 56 2 91 191 14 115 1.67e-20 91.7
MS.gene042508.t1 MTR_4g097570 45.361 97 51 2 91 185 14 110 1.76e-20 90.5
MS.gene042508.t1 MTR_1g073170 41.905 105 58 2 91 193 22 125 1.83e-20 89.7
MS.gene042508.t1 MTR_1g043050 41.176 102 59 1 91 191 14 115 1.90e-20 89.7
MS.gene042508.t1 MTR_4g478180 41.748 103 57 2 91 191 15 116 1.93e-20 91.7
MS.gene042508.t1 MTR_7g117730 36.134 119 70 2 83 195 1 119 1.95e-20 89.7
MS.gene042508.t1 MTR_0197s0010 43.000 100 54 2 94 191 6 104 2.07e-20 89.0
MS.gene042508.t1 MTR_8g027345 36.220 127 73 3 76 198 3 125 2.15e-20 90.5
MS.gene042508.t1 MTR_1g017140 38.655 119 66 3 91 202 14 132 2.48e-20 90.9
MS.gene042508.t1 MTR_8g020490 37.500 112 69 1 87 197 6 117 2.83e-20 89.4
MS.gene042508.t1 MTR_3g028740 42.727 110 61 2 83 191 17 125 2.94e-20 90.9
MS.gene042508.t1 MTR_3g083540 37.069 116 72 1 91 205 43 158 3.30e-20 90.1
MS.gene042508.t1 MTR_4g082290 41.026 117 64 2 76 191 3 115 3.37e-20 91.3
MS.gene042508.t1 MTR_6g055910 48.529 68 35 0 124 191 21 88 3.59e-20 89.0
MS.gene042508.t1 MTR_1g086530 39.640 111 63 3 91 198 35 144 3.66e-20 89.4
MS.gene042508.t1 MTR_7g035075 28.492 179 121 2 91 268 16 188 3.74e-20 87.8
MS.gene042508.t1 MTR_7g102110 39.655 116 63 3 83 191 1 116 4.21e-20 89.4
MS.gene042508.t1 MTR_6g012180 41.237 97 56 1 91 186 14 110 4.37e-20 90.1
MS.gene042508.t1 MTR_2g095520 44.898 98 52 2 91 186 14 111 4.90e-20 89.7
MS.gene042508.t1 MTR_8g017340 43.810 105 55 3 90 191 13 116 5.27e-20 91.3
MS.gene042508.t1 MTR_6g012690 38.000 150 82 3 76 224 3 142 5.56e-20 90.1
MS.gene042508.t1 MTR_5g079120 37.302 126 65 2 91 215 63 175 5.95e-20 89.4
MS.gene042508.t1 MTR_4g485530 42.268 97 53 2 90 184 13 108 5.97e-20 87.0
MS.gene042508.t1 MTR_5g078930 44.681 94 51 1 94 186 14 107 7.68e-20 87.4
MS.gene042508.t1 MTR_5g088080 41.905 105 56 3 91 193 14 115 8.42e-20 88.2
MS.gene042508.t1 MTR_5g088150 41.905 105 56 3 91 193 14 115 8.42e-20 88.2
MS.gene042508.t1 MTR_5g488210 41.905 105 56 3 91 193 14 115 8.42e-20 88.2
MS.gene042508.t1 MTR_7g087130 40.541 111 61 2 82 191 9 115 8.91e-20 89.4
MS.gene042508.t1 MTR_5g088610 39.091 110 63 3 91 198 11 118 9.62e-20 89.4
MS.gene042508.t1 MTR_5g088640 42.857 98 54 2 91 186 14 111 1.15e-19 88.2
MS.gene042508.t1 MTR_5g488170 42.857 98 54 2 91 186 14 111 1.24e-19 87.4
MS.gene042508.t1 MTR_4g029540 44.643 112 57 3 84 193 8 116 2.04e-19 87.8
MS.gene042508.t1 MTR_0140s0030 39.216 102 61 1 91 191 15 116 2.10e-19 88.2
MS.gene042508.t1 MTR_0489s0020 39.216 102 61 1 91 191 15 116 2.10e-19 88.2
MS.gene042508.t1 MTR_7g011170 40.678 118 63 3 76 191 3 115 2.58e-19 87.8
MS.gene042508.t1 MTR_3g039990 39.216 102 61 1 91 191 15 116 2.70e-19 87.4
MS.gene042508.t1 MTR_0193s0090 40.594 101 59 1 91 190 9 109 3.32e-19 85.1
MS.gene042508.t1 MTR_8g017350 40.171 117 61 4 83 191 1 116 4.59e-19 89.0
MS.gene042508.t1 MTR_1g045610 43.000 100 54 2 87 184 19 117 4.86e-19 85.9
MS.gene042508.t1 MTR_7g061550 39.286 112 65 1 86 194 2 113 4.99e-19 87.4
MS.gene042508.t1 MTR_4g128670 43.878 98 53 2 91 186 14 111 7.98e-19 86.7
MS.gene042508.t1 MTR_5g078140 37.121 132 76 3 82 211 9 135 1.35e-18 85.9
MS.gene042508.t1 MTR_6g090405 41.346 104 59 2 91 192 14 117 3.77e-18 83.2
MS.gene042508.t1 MTR_3g065440 41.071 112 59 3 82 191 9 115 3.86e-18 84.3
MS.gene042508.t1 MTR_2g034790 38.235 102 62 1 91 191 14 115 4.71e-18 84.3
MS.gene042508.t1 MTR_1g086510 37.273 110 67 2 91 198 23 132 5.71e-18 83.2
MS.gene042508.t1 MTR_4g102380 39.806 103 59 2 91 191 14 115 8.42e-18 82.8
MS.gene042508.t1 MTR_2g033170 39.091 110 65 2 91 198 26 135 9.21e-18 83.6
MS.gene042508.t1 MTR_7g076740 36.975 119 71 3 91 206 14 131 9.51e-18 83.2
MS.gene042508.t1 MTR_4g121460 37.255 102 63 1 91 191 14 115 9.90e-18 83.6
MS.gene042508.t1 MTR_3g045430 40.777 103 58 3 91 191 15 116 1.64e-17 82.4
MS.gene042508.t1 MTR_6g006030 41.053 95 55 1 91 184 16 110 1.74e-17 80.5
MS.gene042508.t1 MTR_8g031360 41.346 104 57 3 91 191 15 117 2.16e-17 82.0
MS.gene042508.t1 MTR_5g038910 31.250 144 77 2 94 228 29 159 3.38e-17 82.8
MS.gene042508.t1 MTR_5g038910 31.250 144 77 2 94 228 29 159 3.98e-17 82.4
MS.gene042508.t1 MTR_4g063100 48.611 72 36 1 124 195 14 84 7.62e-17 79.0
MS.gene042508.t1 MTR_8g468380 35.714 98 63 0 94 191 25 122 9.05e-17 81.6
MS.gene042508.t1 MTR_4g123040 38.182 110 66 2 91 198 26 135 1.50e-16 79.7
MS.gene042508.t1 MTR_7g111290 51.613 62 30 0 124 185 6 67 3.22e-16 79.0
MS.gene042508.t1 MTR_2g096380 34.711 121 70 2 124 244 23 134 7.29e-16 76.3
MS.gene042508.t1 MTR_1g008970 47.692 65 34 0 117 181 117 181 1.73e-14 72.8
MS.gene042508.t1 MTR_7g109320 38.739 111 63 2 82 191 9 115 4.65e-14 72.8
MS.gene042508.t1 MTR_6g080360 36.957 92 57 1 93 184 481 571 6.23e-14 73.6
MS.gene042508.t1 MTR_4g128190 41.237 97 44 4 91 186 13 97 8.91e-14 70.5
MS.gene042508.t1 MTR_6g080360 37.363 91 56 1 94 184 262 351 9.98e-14 72.8
MS.gene042508.t1 MTR_5g007300 42.667 75 42 1 91 164 66 140 1.21e-12 65.1
MS.gene042508.t1 MTR_0023s0210 42.667 75 42 1 91 164 9 83 2.08e-12 62.8
MS.gene042508.t1 MTR_1g085880 39.048 105 61 3 94 196 17 120 3.11e-12 65.1
MS.gene042508.t1 MTR_1g085770 39.048 105 61 3 94 196 17 120 7.34e-12 65.9
MS.gene042508.t1 MTR_7g115550 40.000 85 50 1 92 176 8 91 1.04e-11 66.6
MS.gene042508.t1 MTR_7g115550 35.052 97 62 1 92 188 8 103 1.11e-11 66.6
MS.gene042508.t1 MTR_6g055910 45.652 46 25 0 146 191 2 47 6.62e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene042508.t1 AT5G17800 44.043 277 106 5 86 355 88 322 1.16e-72 229
MS.gene042508.t1 AT1G69560 46.840 269 97 8 90 356 106 330 7.72e-70 222
MS.gene042508.t1 AT1G69560 46.840 269 97 8 90 356 122 346 1.15e-69 222
MS.gene042508.t1 AT1G26780 77.586 116 26 0 88 203 95 210 1.75e-66 211
MS.gene042508.t1 AT1G26780 56.216 185 70 2 88 261 95 279 4.87e-66 213
MS.gene042508.t1 AT1G17950 71.930 114 32 0 88 201 2 115 1.72e-60 195
MS.gene042508.t1 AT3G29020 70.940 117 34 0 86 202 60 176 3.30e-60 194
MS.gene042508.t1 AT3G29020 70.940 117 34 0 86 202 62 178 1.39e-59 194
MS.gene042508.t1 AT4G33450 42.105 266 119 7 89 354 17 247 8.71e-59 191
MS.gene042508.t1 AT1G73410 41.818 275 114 7 88 354 3 239 5.20e-57 186
MS.gene042508.t1 AT1G73410 78.505 107 23 0 88 194 3 109 1.34e-56 183
MS.gene042508.t1 AT5G39700 64.423 104 37 0 92 195 57 160 3.08e-43 148
MS.gene042508.t1 AT5G67300 41.714 175 91 3 91 255 6 179 4.31e-38 138
MS.gene042508.t1 AT4G37260 42.500 160 77 3 91 248 13 159 2.28e-37 137
MS.gene042508.t1 AT3G55730 55.769 104 46 0 91 194 56 159 1.01e-36 137
MS.gene042508.t1 AT2G39880 55.357 112 48 1 84 195 45 154 1.58e-36 135
MS.gene042508.t1 AT3G50060 53.465 101 47 0 91 191 6 106 4.13e-35 130
MS.gene042508.t1 AT2G23290 53.465 101 47 0 91 191 13 113 4.68e-35 130
MS.gene042508.t1 AT3G09230 53.465 101 47 0 91 191 55 155 4.66e-34 130
MS.gene042508.t1 AT3G09370 52.475 101 48 0 91 191 130 230 8.04e-32 125
MS.gene042508.t1 AT3G09370 52.475 101 48 0 91 191 135 235 8.42e-32 125
MS.gene042508.t1 AT3G09370 52.475 101 48 0 91 191 143 243 1.22e-31 125
MS.gene042508.t1 AT5G02320 52.475 101 48 0 91 191 127 227 1.66e-31 125
MS.gene042508.t1 AT5G02320 52.475 101 48 0 91 191 127 227 1.66e-31 125
MS.gene042508.t1 AT5G02320 52.475 101 48 0 91 191 67 167 2.30e-31 124
MS.gene042508.t1 AT4G32730 41.481 135 74 2 61 191 54 187 1.94e-30 123
MS.gene042508.t1 AT4G32730 41.481 135 74 2 61 191 54 187 1.94e-30 123
MS.gene042508.t1 AT4G32730 41.481 135 74 2 61 191 54 187 1.94e-30 123
MS.gene042508.t1 AT4G32730 41.481 135 74 2 61 191 54 187 1.94e-30 123
MS.gene042508.t1 AT4G32730 41.481 135 74 2 61 191 54 187 1.99e-30 122
MS.gene042508.t1 AT5G11510 40.000 135 76 2 61 191 48 181 8.15e-30 121
MS.gene042508.t1 AT5G11510 40.000 135 76 2 61 191 48 181 8.15e-30 121
MS.gene042508.t1 AT5G11510 40.000 135 76 2 61 191 48 181 8.15e-30 121
MS.gene042508.t1 AT5G11510 39.706 136 77 2 60 191 47 181 9.08e-30 120
MS.gene042508.t1 AT5G11510 39.706 136 77 2 60 191 47 181 9.76e-30 120
MS.gene042508.t1 AT5G58850 50.000 112 56 0 80 191 94 205 1.13e-29 118
MS.gene042508.t1 AT5G11050 36.585 164 87 2 91 239 105 266 4.07e-29 117
MS.gene042508.t1 AT5G40360 40.000 150 87 2 46 192 110 259 4.22e-29 115
MS.gene042508.t1 AT3G27785 38.889 162 85 3 91 250 189 338 5.39e-28 114
MS.gene042508.t1 AT2G25230 49.495 99 48 2 93 190 28 125 3.70e-27 107
MS.gene042508.t1 AT4G18770 42.857 126 72 0 91 216 217 342 4.68e-27 111
MS.gene042508.t1 AT3G11440 42.735 117 66 1 84 199 36 152 2.26e-26 109
MS.gene042508.t1 AT3G11440 42.735 117 66 1 84 199 36 152 2.78e-26 110
MS.gene042508.t1 AT3G11440 42.735 117 66 1 84 199 36 152 2.78e-26 110
MS.gene042508.t1 AT3G11440 42.735 117 66 1 84 199 36 152 2.78e-26 110
MS.gene042508.t1 AT3G48920 42.276 123 68 2 91 210 20 142 3.34e-26 105
MS.gene042508.t1 AT2G32460 45.045 111 58 2 91 199 20 129 4.04e-25 106
MS.gene042508.t1 AT1G79180 46.602 103 52 2 91 191 16 117 4.53e-25 103
MS.gene042508.t1 AT2G32460 45.045 111 58 2 91 199 8 117 5.08e-25 105
MS.gene042508.t1 AT5G40430 36.774 155 82 3 46 190 4 152 6.45e-25 102
MS.gene042508.t1 AT4G28110 43.478 115 59 2 83 191 1 115 7.29e-25 102
MS.gene042508.t1 AT5G40330 43.137 102 57 1 91 191 14 115 7.94e-25 100
MS.gene042508.t1 AT4G25560 43.363 113 61 2 81 191 2 113 1.16e-24 102
MS.gene042508.t1 AT5G06100 43.636 110 61 1 91 199 34 143 1.28e-24 104
MS.gene042508.t1 AT2G26950 43.103 116 54 3 83 193 10 118 1.43e-24 103
MS.gene042508.t1 AT4G26930 43.636 110 61 1 91 199 21 130 1.45e-24 103
MS.gene042508.t1 AT3G23250 33.659 205 122 6 91 286 14 213 1.50e-24 101
MS.gene042508.t1 AT5G06100 43.636 110 61 1 91 199 34 143 1.62e-24 104
MS.gene042508.t1 AT5G06100 43.636 110 61 1 91 199 34 143 1.62e-24 104
MS.gene042508.t1 AT5G06100 43.636 110 61 1 91 199 34 143 1.62e-24 104
MS.gene042508.t1 AT5G06100 43.636 110 61 1 91 199 34 143 1.62e-24 104
MS.gene042508.t1 AT5G14750 43.137 102 57 1 91 191 18 119 1.83e-24 99.8
MS.gene042508.t1 AT3G27920 44.118 102 56 1 91 191 16 117 1.89e-24 100
MS.gene042508.t1 AT1G63910 40.458 131 72 2 83 207 1 131 2.06e-24 103
MS.gene042508.t1 AT1G18570 45.098 102 55 1 91 191 15 116 2.15e-24 102
MS.gene042508.t1 AT3G12720 45.631 103 53 2 91 191 24 125 3.33e-24 101
MS.gene042508.t1 AT5G56110 46.078 102 54 1 91 191 14 115 6.75e-24 100
MS.gene042508.t1 AT1G74080 35.838 173 103 4 91 261 14 180 1.22e-23 100
MS.gene042508.t1 AT2G31180 44.118 102 56 1 91 191 14 115 1.72e-23 98.2
MS.gene042508.t1 AT1G56160 44.660 103 54 2 91 191 16 117 2.83e-23 98.6
MS.gene042508.t1 AT3G28470 49.474 95 47 1 91 184 14 108 3.02e-23 99.0
MS.gene042508.t1 AT5G61420 39.007 141 84 2 91 229 14 154 3.59e-23 99.4
MS.gene042508.t1 AT5G65230 45.631 103 53 2 91 191 14 115 4.24e-23 98.2
MS.gene042508.t1 AT4G05100 42.241 116 60 2 83 191 1 116 4.94e-23 98.6
MS.gene042508.t1 AT5G54230 43.137 102 57 1 91 191 14 115 5.71e-23 98.2
MS.gene042508.t1 AT1G09540 38.462 143 84 3 85 224 8 149 6.99e-23 98.6
MS.gene042508.t1 AT5G10280 44.660 103 54 2 91 191 14 115 8.30e-23 97.8
MS.gene042508.t1 AT5G60890 39.655 116 69 1 91 205 14 129 9.13e-23 97.1
MS.gene042508.t1 AT2G26960 43.243 111 62 1 90 199 21 131 1.01e-22 99.0
MS.gene042508.t1 AT3G12820 44.660 103 54 2 91 191 16 117 1.16e-22 95.5
MS.gene042508.t1 AT5G62470 41.584 101 59 0 91 191 14 114 1.28e-22 97.8
MS.gene042508.t1 AT1G74430 37.600 125 77 1 91 214 14 138 1.40e-22 96.3
MS.gene042508.t1 AT5G07700 37.736 159 91 3 91 242 14 171 1.57e-22 97.4
MS.gene042508.t1 AT5G07700 37.736 159 91 3 91 242 14 171 1.57e-22 97.4
MS.gene042508.t1 AT4G00540 46.154 104 53 1 91 191 103 206 1.63e-22 98.2
MS.gene042508.t1 AT5G52600 44.118 102 56 1 91 191 14 115 1.77e-22 94.0
MS.gene042508.t1 AT1G16490 44.660 103 54 2 91 191 16 117 1.78e-22 95.9
MS.gene042508.t1 AT3G30210 37.500 128 79 1 89 215 27 154 2.26e-22 95.5
MS.gene042508.t1 AT3G13890 42.593 108 56 2 83 184 1 108 2.91e-22 96.7
MS.gene042508.t1 AT4G17785 40.714 140 69 5 83 214 1 134 3.02e-22 96.7
MS.gene042508.t1 AT4G17785 40.714 140 69 5 83 214 1 134 3.16e-22 96.7
MS.gene042508.t1 AT4G00540 46.154 104 53 1 91 191 101 204 3.41e-22 97.4
MS.gene042508.t1 AT5G52260 48.544 103 50 2 91 191 14 115 3.90e-22 94.7
MS.gene042508.t1 AT5G55020 41.818 110 63 1 91 199 28 137 4.41e-22 97.8
MS.gene042508.t1 AT3G47600 42.157 102 58 1 91 191 14 115 7.53e-22 95.1
MS.gene042508.t1 AT4G38620 31.361 169 97 3 83 245 1 156 7.73e-22 94.4
MS.gene042508.t1 AT5G57620 44.660 103 55 2 91 191 14 116 8.65e-22 95.1
MS.gene042508.t1 AT5G26660 35.570 149 89 3 91 233 14 161 9.02e-22 95.5
MS.gene042508.t1 AT3G02940 39.130 115 64 2 83 191 1 115 1.23e-21 94.4
MS.gene042508.t1 AT5G23000 44.231 104 54 2 91 191 14 116 1.24e-21 94.7
MS.gene042508.t1 AT4G01680 39.091 110 66 1 85 193 8 117 1.58e-21 92.4
MS.gene042508.t1 AT5G16770 39.130 115 64 2 83 191 1 115 1.61e-21 94.4
MS.gene042508.t1 AT5G16770 39.130 115 64 2 83 191 1 115 1.61e-21 94.4
MS.gene042508.t1 AT3G53200 42.056 107 59 2 91 195 11 116 1.63e-21 92.4
MS.gene042508.t1 AT1G22640 39.655 116 62 3 83 191 1 115 1.80e-21 92.8
MS.gene042508.t1 AT1G35515 36.522 115 67 2 83 191 1 115 1.81e-21 91.7
MS.gene042508.t1 AT3G02940 39.130 115 64 2 83 191 1 115 1.84e-21 94.0
MS.gene042508.t1 AT3G02940 39.130 115 64 2 83 191 1 115 1.84e-21 94.0
MS.gene042508.t1 AT5G35550 30.612 196 116 5 90 282 15 193 2.09e-21 92.4
MS.gene042508.t1 AT3G13890 40.171 117 55 3 83 184 1 117 2.11e-21 94.4
MS.gene042508.t1 AT5G07690 39.516 124 69 2 91 213 14 132 2.26e-21 94.0
MS.gene042508.t1 AT5G16770 39.130 115 64 2 83 191 1 115 2.38e-21 94.0
MS.gene042508.t1 AT5G16770 39.130 115 64 2 83 191 1 115 2.38e-21 94.0
MS.gene042508.t1 AT1G06180 41.880 117 60 4 82 195 9 120 2.42e-21 92.0
MS.gene042508.t1 AT4G21440 43.137 102 57 1 91 191 14 115 2.48e-21 94.0
MS.gene042508.t1 AT1G34670 40.000 115 63 2 83 191 1 115 3.17e-21 94.0
MS.gene042508.t1 AT1G79180 37.037 135 51 2 91 191 16 150 3.19e-21 93.2
MS.gene042508.t1 AT4G09460 31.609 174 103 3 83 240 1 174 3.49e-21 91.3
MS.gene042508.t1 AT5G15310 29.185 233 132 7 83 288 1 227 3.61e-21 91.7
MS.gene042508.t1 AT5G62470 41.176 102 59 1 91 191 14 115 4.06e-21 93.6
MS.gene042508.t1 AT4G01680 39.091 110 66 1 85 193 8 117 4.49e-21 93.2
MS.gene042508.t1 AT5G15310 37.415 147 83 3 83 223 1 144 5.46e-21 92.8
MS.gene042508.t1 AT3G49690 44.660 103 55 2 91 191 14 116 5.77e-21 92.4
MS.gene042508.t1 AT1G57560 35.028 177 104 5 85 254 8 180 5.90e-21 91.7
MS.gene042508.t1 AT1G66370 37.963 108 66 1 91 197 10 117 6.39e-21 90.9
MS.gene042508.t1 AT5G15310 37.415 147 83 3 83 223 1 144 6.70e-21 92.4
MS.gene042508.t1 AT3G01140 39.130 115 64 2 83 191 1 115 1.00e-20 92.4
MS.gene042508.t1 AT5G12870 37.391 115 71 1 78 191 7 121 1.03e-20 91.3
MS.gene042508.t1 AT3G46130 41.121 107 60 2 91 195 11 116 1.27e-20 90.5
MS.gene042508.t1 AT5G59780 40.187 107 61 2 91 195 10 115 1.37e-20 89.7
MS.gene042508.t1 AT3G01140 41.176 102 59 1 91 191 57 158 1.69e-20 92.0
MS.gene042508.t1 AT5G14340 40.000 105 60 2 91 193 26 129 1.70e-20 90.5
MS.gene042508.t1 AT1G57560 35.172 145 89 3 85 227 8 149 1.71e-20 91.3
MS.gene042508.t1 AT5G14750 48.529 68 35 0 124 191 18 85 1.95e-20 87.8
MS.gene042508.t1 AT1G18710 40.196 102 60 1 91 191 14 115 2.03e-20 90.1
MS.gene042508.t1 AT3G60460 45.714 105 55 2 91 193 13 117 2.49e-20 90.5
MS.gene042508.t1 AT5G65790 34.752 141 86 3 91 225 14 154 2.67e-20 91.3
MS.gene042508.t1 AT3G08500 42.157 102 58 1 91 191 32 133 3.89e-20 90.5
MS.gene042508.t1 AT2G47190 40.000 110 64 2 91 198 22 131 4.10e-20 89.4
MS.gene042508.t1 AT1G25340 38.462 104 60 1 91 194 20 119 5.81e-20 89.0
MS.gene042508.t1 AT1G66380 37.600 125 77 1 84 207 3 127 7.20e-20 85.1
MS.gene042508.t1 AT4G01680 37.705 122 63 2 85 193 8 129 7.64e-20 89.7
MS.gene042508.t1 AT1G25340 38.462 104 60 1 91 194 20 119 8.27e-20 89.0
MS.gene042508.t1 AT1G25340 38.095 105 64 1 91 194 20 124 8.28e-20 88.6
MS.gene042508.t1 AT3G28910 40.196 102 60 1 91 191 14 115 9.11e-20 89.4
MS.gene042508.t1 AT3G61250 37.594 133 76 3 82 212 9 136 9.51e-20 88.6
MS.gene042508.t1 AT2G16720 37.069 116 65 3 83 191 1 115 1.04e-19 88.2
MS.gene042508.t1 AT4G34990 37.391 115 66 2 83 191 1 115 1.15e-19 88.2
MS.gene042508.t1 AT5G16600 37.594 133 76 3 82 212 9 136 1.29e-19 89.0
MS.gene042508.t1 AT1G68320 39.623 106 61 2 91 194 21 125 1.63e-19 87.8
MS.gene042508.t1 AT3G13540 34.146 123 80 1 91 212 25 147 1.92e-19 87.0
MS.gene042508.t1 AT1G56650 35.484 124 79 1 84 206 3 126 2.92e-19 86.3
MS.gene042508.t1 AT1G74650 38.235 102 62 1 91 191 14 115 3.09e-19 87.8
MS.gene042508.t1 AT5G49620 36.232 138 82 3 63 198 4 137 3.33e-19 87.4
MS.gene042508.t1 AT2G36890 43.269 104 55 3 91 191 14 116 3.76e-19 87.0
MS.gene042508.t1 AT1G08810 33.553 152 98 2 91 239 14 165 3.85e-19 86.7
MS.gene042508.t1 AT2G36890 43.269 104 55 3 91 191 55 157 4.15e-19 87.4
MS.gene042508.t1 AT1G66230 36.552 145 84 4 82 223 9 148 4.98e-19 86.3
MS.gene042508.t1 AT2G02820 33.884 121 80 0 94 214 33 153 5.08e-19 88.2
MS.gene042508.t1 AT2G02820 33.884 121 80 0 94 214 33 153 5.55e-19 87.0
MS.gene042508.t1 AT2G02820 33.884 121 80 0 94 214 33 153 6.53e-19 88.2
MS.gene042508.t1 AT3G12820 51.471 68 33 0 124 191 2 69 7.81e-19 84.0
MS.gene042508.t1 AT4G13480 40.187 107 61 2 87 191 4 109 8.43e-19 85.5
MS.gene042508.t1 AT3G24310 41.748 103 57 2 91 191 20 121 8.43e-19 85.5
MS.gene042508.t1 AT3G53200 48.611 72 37 0 124 195 12 83 1.30e-18 83.6
MS.gene042508.t1 AT1G48000 43.158 95 53 1 91 184 34 128 1.65e-18 84.3
MS.gene042508.t1 AT3G01530 29.775 178 111 3 91 266 27 192 2.27e-18 82.8
MS.gene042508.t1 AT4G12350 38.679 106 62 2 88 191 11 115 2.38e-18 84.7
MS.gene042508.t1 AT5G35550 46.154 78 40 1 116 191 43 120 2.46e-18 84.0
MS.gene042508.t1 AT5G40350 41.053 95 55 1 91 184 19 113 2.66e-18 82.8
MS.gene042508.t1 AT3G27810 41.053 95 55 1 91 184 22 116 4.60e-18 82.4
MS.gene042508.t1 AT4G22680 40.777 103 58 2 91 191 14 115 8.38e-18 82.8
MS.gene042508.t1 AT4G37780 38.835 103 61 2 91 191 14 116 1.05e-17 83.2
MS.gene042508.t1 AT2G47460 35.556 135 77 3 91 224 14 139 1.35e-17 83.6
MS.gene042508.t1 AT1G14350 34.951 103 67 0 94 196 28 130 1.39e-17 84.0
MS.gene042508.t1 AT1G14350 34.951 103 67 0 94 196 28 130 1.39e-17 84.0
MS.gene042508.t1 AT5G26660 36.842 114 68 1 124 233 17 130 1.56e-17 82.8
MS.gene042508.t1 AT3G06490 39.091 110 65 2 91 198 21 130 1.66e-17 82.8
MS.gene042508.t1 AT5G49330 37.864 103 61 2 91 191 14 115 3.94e-17 82.0
MS.gene042508.t1 AT5G59780 45.833 72 39 0 124 195 23 94 4.10e-17 79.7
MS.gene042508.t1 AT2G37630 33.571 140 83 2 91 220 4 143 5.24e-17 81.6
MS.gene042508.t1 AT3G46130 43.210 81 44 1 117 195 4 84 5.64e-17 79.3
MS.gene042508.t1 AT1G66390 40.000 110 65 1 84 192 3 112 6.91e-17 79.7
MS.gene042508.t1 AT3G46130 45.833 72 39 0 124 195 23 94 7.70e-17 79.3
MS.gene042508.t1 AT3G62610 35.043 117 71 2 76 191 3 115 1.92e-16 79.7
MS.gene042508.t1 AT3G18100 38.298 94 58 0 91 184 546 639 2.78e-16 80.9
MS.gene042508.t1 AT3G18100 38.298 94 58 0 91 184 498 591 3.02e-16 80.5
MS.gene042508.t1 AT3G18100 38.298 94 58 0 91 184 385 478 3.65e-16 80.5
MS.gene042508.t1 AT3G18100 38.298 94 58 0 91 184 333 426 4.38e-16 80.1
MS.gene042508.t1 AT5G49620 32.895 152 82 4 63 198 4 151 7.67e-16 77.8
MS.gene042508.t1 AT5G40350 47.541 61 32 0 124 184 8 68 1.23e-15 74.3
MS.gene042508.t1 AT3G27810 47.541 61 32 0 124 184 7 67 2.53e-15 73.6
MS.gene042508.t1 AT5G62320 38.182 110 58 3 91 191 15 123 2.77e-15 75.1
MS.gene042508.t1 AT1G66380 45.570 79 43 0 124 202 11 89 3.27e-15 71.2
MS.gene042508.t1 AT3G47600 45.588 68 37 0 124 191 42 109 7.68e-15 75.1
MS.gene042508.t1 AT1G71030 41.538 65 38 0 127 191 5 69 1.29e-13 68.9
MS.gene042508.t1 AT1G71030 41.538 65 38 0 127 191 19 83 1.54e-13 68.9
MS.gene042508.t1 AT5G14750 41.379 58 34 0 134 191 1 58 5.75e-13 66.2
MS.gene042508.t1 AT5G14750 41.379 58 34 0 134 191 1 58 5.75e-13 66.2
MS.gene042508.t1 AT3G23250 40.845 71 38 1 134 204 1 67 1.36e-12 67.0
MS.gene042508.t1 AT1G22640 43.103 58 33 0 134 191 1 58 9.08e-12 63.9
MS.gene042508.t1 AT1G09770 40.000 85 50 1 92 176 8 91 1.71e-11 66.2

Find 62 sgRNAs with CRISPR-Local

Find 102 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGAATATGGTCCTCAAAAT+TGG 0.247103 7.2:+20839689 MS.gene042508:CDS
AGGTCCAATATCTCAATTTC+TGG 0.252170 7.2:+20840912 MS.gene042508:CDS
TTCACCAGAAATTGAGATAT+TGG 0.257304 7.2:-20840916 None:intergenic
CAAGGCTATGGATCACTAAT+TGG 0.300303 7.2:+20840424 MS.gene042508:CDS
AAGGAGCTTGTTGCTGAATA+TGG 0.317262 7.2:+20839676 MS.gene042508:CDS
TTAAGTTTAGCATCTTCTAT+TGG 0.361231 7.2:-20839655 None:intergenic
GAAAGACTTTCAACAACAAC+AGG 0.361584 7.2:-20840259 None:intergenic
CTCTTCTTCCTCCTCAGAAA+AGG 0.362113 7.2:-20840083 None:intergenic
AAAGCACCCATCTTCTACTT+TGG 0.377594 7.2:-20839521 None:intergenic
ACTATCTCAAGCACCATTGA+TGG 0.379397 7.2:+20840328 MS.gene042508:CDS
AATTGAGATATTGGACCTAT+TGG 0.389765 7.2:-20840907 None:intergenic
ATAAAATGTATGGTAACAAA+TGG 0.396082 7.2:+20840122 MS.gene042508:CDS
AGGAGTGAGTGAGAGATTAG+TGG 0.396526 7.2:-20840365 None:intergenic
TTATCTGCTCATAAAATGTA+TGG 0.400874 7.2:+20840112 MS.gene042508:CDS
ACAAGATAAGTTGAAGGAAT+AGG 0.408227 7.2:-20839427 None:intergenic
TCCTTTGACAAACCCTGAAA+AGG 0.411626 7.2:+20839465 MS.gene042508:CDS
AGCTTTGTTCTAGAGGTCAT+TGG 0.416349 7.2:+20839629 MS.gene042508:CDS
GTTTGTCAAAGGAAGAGCTT+TGG 0.416396 7.2:-20839455 None:intergenic
AATAGAAGATGCTAAACTTA+AGG 0.419512 7.2:+20839657 MS.gene042508:CDS
AGCTCTGTTTCTGTGAAAGT+TGG 0.422370 7.2:+20839598 MS.gene042508:CDS
TATTCCTTCAACTTATCTTG+TGG 0.429455 7.2:+20839429 MS.gene042508:CDS
AACAGTGTACTGTGTATAGA+AGG 0.441649 7.2:+20840230 MS.gene042508:CDS
TTGATTGCAGAACATCTTGA+AGG 0.454431 7.2:+20839715 MS.gene042508:CDS
TTTAAGTCCAAAGTAGAAGA+TGG 0.458745 7.2:+20839514 MS.gene042508:CDS
TAGCCTTGGTGATTCTCAAC+TGG 0.460365 7.2:-20840409 None:intergenic
GTTGAAGGAATAGGAGCTAA+AGG 0.461111 7.2:-20839418 None:intergenic
ACTTTGGACTTAAACATTGA+GGG 0.468793 7.2:-20839505 None:intergenic
ATAATGCAGTGAAGAATCAT+TGG 0.470220 7.2:+20840179 MS.gene042508:CDS
GAGAAAGTGTGGTGGCAACT+AGG 0.473551 7.2:+20840745 MS.gene042508:CDS
AGAAAGTGTGGTGGCAACTA+GGG 0.475189 7.2:+20840746 MS.gene042508:CDS
GAACATCTTGAAGGAAGATC+AGG 0.475989 7.2:+20839724 MS.gene042508:CDS
GATGGGTGCTTTGAGGTTCA+AGG 0.478786 7.2:+20839532 MS.gene042508:CDS
TACTTTGGACTTAAACATTG+AGG 0.483288 7.2:-20839506 None:intergenic
CATTACCAAGTTTCAAAGAC+AGG 0.490809 7.2:-20839561 None:intergenic
CCTTTGACAAACCCTGAAAA+GGG 0.491757 7.2:+20839466 MS.gene042508:CDS
CTGAGTCAGTTACCACCAAT+AGG 0.493276 7.2:+20840892 MS.gene042508:CDS
GTTGAGAATCACCAAGGCTA+TGG 0.494178 7.2:+20840412 MS.gene042508:CDS
TACTCCAAGCTTTGTTCTAG+AGG 0.507196 7.2:+20839622 MS.gene042508:CDS
TAAAATGTATGGTAACAAAT+GGG 0.508678 7.2:+20840123 MS.gene042508:CDS
ACTCCAAGAAAATCAATGAA+TGG 0.522689 7.2:-20840975 None:intergenic
TGAGATATTGGACCTATTGG+TGG 0.526375 7.2:-20840904 None:intergenic
GAATCCACAAGATAAGTTGA+AGG 0.528997 7.2:-20839433 None:intergenic
AGTAGAAGATGGGTGCTTTG+AGG 0.530721 7.2:+20839525 MS.gene042508:CDS
GAATCATTGGCATGTGATCA+TGG 0.539113 7.2:+20840192 MS.gene042508:CDS
AGTTGAGACAATTCCATCAA+TGG 0.540451 7.2:-20840341 None:intergenic
TGTTGTTGAAAGTCTTTCAA+AGG 0.540837 7.2:+20840264 MS.gene042508:CDS
ACAACTAGTTTAGCTGAAGA+AGG 0.544088 7.2:-20840385 None:intergenic
TGATCATGGCTAGAAGACAT+AGG 0.551949 7.2:+20840206 MS.gene042508:CDS
ATGACCTCTAGAACAAAGCT+TGG 0.553743 7.2:-20839626 None:intergenic
ACTGCATTATCTGTCCTCCC+TGG 0.564600 7.2:-20840166 None:intergenic
CAATTAGTGATCCATAGCCT+TGG 0.566165 7.2:-20840423 None:intergenic
GATCATGGCTAGAAGACATA+GGG 0.580957 7.2:+20840207 MS.gene042508:CDS
AAAGCTAATAGATGTGGTGG+TGG 0.582978 7.2:+20840827 MS.gene042508:CDS
TCTGGTGAAAGTGAAAATGT+TGG 0.594833 7.2:+20840930 MS.gene042508:CDS
TTAAGTCCAAAGTAGAAGAT+GGG 0.595363 7.2:+20839515 MS.gene042508:CDS
ACTAAAGCTAATAGATGTGG+TGG 0.598165 7.2:+20840824 MS.gene042508:CDS
AAAACTAAAGCTAATAGATG+TGG 0.611445 7.2:+20840821 MS.gene042508:CDS
TTGTAAGAAGAATGAACAAG+TGG 0.631441 7.2:+20840797 MS.gene042508:CDS
ACTTCACAAAAGTTCAACAA+TGG 0.637959 7.2:+20839373 MS.gene042508:CDS
AGACAAATCTAGAGAAAGTG+TGG 0.652450 7.2:+20840734 MS.gene042508:intron
GTTCCAGTTGAGAATCACCA+AGG 0.704835 7.2:+20840406 MS.gene042508:CDS
CAAATCTAGAGAAAGTGTGG+TGG 0.706572 7.2:+20840737 MS.gene042508:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTAATATTTTCTTAAAAA+TGG - chr7.2:20839765-20839784 None:intergenic 10.0%
!!! TTAATATTTTCTTAAAAATG+GGG - chr7.2:20839763-20839782 None:intergenic 10.0%
!! ATATTTAATAATCTCTCATT+AGG + chr7.2:20840453-20840472 MS.gene042508:intron 15.0%
!! TGTTATGTAACAATTAAATT+TGG - chr7.2:20840686-20840705 None:intergenic 15.0%
!!! ACCATATTTTATACTATTAT+AGG - chr7.2:20840479-20840498 None:intergenic 15.0%
!! ATAAAATGTATGGTAACAAA+TGG + chr7.2:20840122-20840141 MS.gene042508:CDS 20.0%
!! GCCTATAATAGTATAAAATA+TGG + chr7.2:20840475-20840494 MS.gene042508:intron 20.0%
!! TAAAATGTATGGTAACAAAT+GGG + chr7.2:20840123-20840142 MS.gene042508:CDS 20.0%
!!! TAAAATATGGTTTTAAGTTG+CGG + chr7.2:20840488-20840507 MS.gene042508:intron 20.0%
!!! TTGTTTTCAATTTTAATTGC+AGG + chr7.2:20840004-20840023 MS.gene042508:intron 20.0%
! AAAACTAAAGCTAATAGATG+TGG + chr7.2:20840821-20840840 MS.gene042508:CDS 25.0%
! AATAGAAGATGCTAAACTTA+AGG + chr7.2:20839657-20839676 MS.gene042508:CDS 25.0%
! AGAGTTTGAATCTGAAAAAT+TGG - chr7.2:20840859-20840878 None:intergenic 25.0%
! CGCAATATAAATATTTGTAG+CGG - chr7.2:20840522-20840541 None:intergenic 25.0%
! CGCTACAAATATTTATATTG+CGG + chr7.2:20840520-20840539 MS.gene042508:intron 25.0%
! TTAAGTTTAGCATCTTCTAT+TGG - chr7.2:20839658-20839677 None:intergenic 25.0%
! TTATCTGCTCATAAAATGTA+TGG + chr7.2:20840112-20840131 MS.gene042508:CDS 25.0%
! TTTATATTGCGGTAAAATGT+AGG + chr7.2:20840531-20840550 MS.gene042508:intron 25.0%
!!! AAGGTTTTTTTGTTGATTCT+TGG - chr7.2:20840067-20840086 None:intergenic 25.0%
!!! AGGTTTTTTTGTTGATTCTT+GGG - chr7.2:20840066-20840085 None:intergenic 25.0%
!!! GTGAATTTTGACAAGTATTT+TGG + chr7.2:20840771-20840790 MS.gene042508:CDS 25.0%
AATTGAGATATTGGACCTAT+TGG - chr7.2:20840910-20840929 None:intergenic 30.0%
ACTCCAAGAAAATCAATGAA+TGG - chr7.2:20840978-20840997 None:intergenic 30.0%
ACTTCACAAAAGTTCAACAA+TGG + chr7.2:20839373-20839392 MS.gene042508:CDS 30.0%
ACTTTGGACTTAAACATTGA+GGG - chr7.2:20839508-20839527 None:intergenic 30.0%
ATAATGCAGTGAAGAATCAT+TGG + chr7.2:20840179-20840198 MS.gene042508:CDS 30.0%
TACTTTGGACTTAAACATTG+AGG - chr7.2:20839509-20839528 None:intergenic 30.0%
TATTCCTTCAACTTATCTTG+TGG + chr7.2:20839429-20839448 MS.gene042508:CDS 30.0%
TGTTGTTGAAAGTCTTTCAA+AGG + chr7.2:20840264-20840283 MS.gene042508:CDS 30.0%
TTAAGTCCAAAGTAGAAGAT+GGG + chr7.2:20839515-20839534 MS.gene042508:CDS 30.0%
TTCACCAGAAATTGAGATAT+TGG - chr7.2:20840919-20840938 None:intergenic 30.0%
TTGAATCTGAAAAATTGGAC+TGG - chr7.2:20840854-20840873 None:intergenic 30.0%
TTGTAAGAAGAATGAACAAG+TGG + chr7.2:20840797-20840816 MS.gene042508:CDS 30.0%
TTTAAGTCCAAAGTAGAAGA+TGG + chr7.2:20839514-20839533 MS.gene042508:CDS 30.0%
! ACAAGATAAGTTGAAGGAAT+AGG - chr7.2:20839430-20839449 None:intergenic 30.0%
! ATTTTCTTAAAAATGGGGTG+AGG - chr7.2:20839758-20839777 None:intergenic 30.0%
! CAACAAAAAAACCTTTTCTG+AGG + chr7.2:20840072-20840091 MS.gene042508:CDS 30.0%
!! AAAAACCTGTCTTTGAAACT+TGG + chr7.2:20839556-20839575 MS.gene042508:CDS 30.0%
!! ATAATTGCTAGACTTTTTCC+AGG + chr7.2:20840148-20840167 MS.gene042508:CDS 30.0%
!! TAATTGCTAGACTTTTTCCA+GGG + chr7.2:20840149-20840168 MS.gene042508:CDS 30.0%
!!! CTACCATTCATTGATTTTCT+TGG + chr7.2:20840972-20840991 MS.gene042508:CDS 30.0%
!!! TTCATTGATTTTCTTGGAGT+AGG + chr7.2:20840978-20840997 MS.gene042508:CDS 30.0%
AACAGTGTACTGTGTATAGA+AGG + chr7.2:20840230-20840249 MS.gene042508:CDS 35.0%
ACTAAAGCTAATAGATGTGG+TGG + chr7.2:20840824-20840843 MS.gene042508:CDS 35.0%
AGACAAATCTAGAGAAAGTG+TGG + chr7.2:20840734-20840753 MS.gene042508:intron 35.0%
AGGTCCAATATCTCAATTTC+TGG + chr7.2:20840912-20840931 MS.gene042508:CDS 35.0%
AGTTGAGACAATTCCATCAA+TGG - chr7.2:20840344-20840363 None:intergenic 35.0%
CAGGAAAAAGTTGTAGATTG+AGG + chr7.2:20840023-20840042 MS.gene042508:intron 35.0%
CATCACAATTGTAAATGCGA+AGG - chr7.2:20840571-20840590 None:intergenic 35.0%
CATTACCAAGTTTCAAAGAC+AGG - chr7.2:20839564-20839583 None:intergenic 35.0%
CTGAATATGGTCCTCAAAAT+TGG + chr7.2:20839689-20839708 MS.gene042508:CDS 35.0%
GAAAAAGTTGTAGATTGAGG+TGG + chr7.2:20840026-20840045 MS.gene042508:CDS 35.0%
GAAAGACTTTCAACAACAAC+AGG - chr7.2:20840262-20840281 None:intergenic 35.0%
GTAAGTGCATGTTTGGATTT+AGG + chr7.2:20839808-20839827 MS.gene042508:intron 35.0%
TCTGGTGAAAGTGAAAATGT+TGG + chr7.2:20840930-20840949 MS.gene042508:CDS 35.0%
TTGATTGCAGAACATCTTGA+AGG + chr7.2:20839715-20839734 MS.gene042508:CDS 35.0%
! AAAATCTGAAGACCCTTTTC+AGG - chr7.2:20839481-20839500 None:intergenic 35.0%
! AAATCTGAAGACCCTTTTCA+GGG - chr7.2:20839480-20839499 None:intergenic 35.0%
! AATTGTAAATGCGAAGGCAT+CGG - chr7.2:20840565-20840584 None:intergenic 35.0%
! ACAACTAGTTTAGCTGAAGA+AGG - chr7.2:20840388-20840407 None:intergenic 35.0%
! GAATCCACAAGATAAGTTGA+AGG - chr7.2:20839436-20839455 None:intergenic 35.0%
! GCAATCAAGTTCCAATTTTG+AGG - chr7.2:20839703-20839722 None:intergenic 35.0%
!! CAAAAAAACCTTTTCTGAGG+AGG + chr7.2:20840075-20840094 MS.gene042508:CDS 35.0%
!! TTCTAGAGTAAGTGCATGTT+TGG + chr7.2:20839801-20839820 MS.gene042508:intron 35.0%
AAAGCTAATAGATGTGGTGG+TGG + chr7.2:20840827-20840846 MS.gene042508:CDS 40.0%
ACTATCTCAAGCACCATTGA+TGG + chr7.2:20840328-20840347 MS.gene042508:CDS 40.0%
CAAGGCTATGGATCACTAAT+TGG + chr7.2:20840424-20840443 MS.gene042508:CDS 40.0%
CAATTAGTGATCCATAGCCT+TGG - chr7.2:20840426-20840445 None:intergenic 40.0%
CCTTTGACAAACCCTGAAAA+GGG + chr7.2:20839466-20839485 MS.gene042508:CDS 40.0%
GAACATCTTGAAGGAAGATC+AGG + chr7.2:20839724-20839743 MS.gene042508:CDS 40.0%
GAATCATTGGCATGTGATCA+TGG + chr7.2:20840192-20840211 MS.gene042508:CDS 40.0%
GATCATGGCTAGAAGACATA+GGG + chr7.2:20840207-20840226 MS.gene042508:CDS 40.0%
GCGGTAAAATGTAGGCAATT+GGG + chr7.2:20840539-20840558 MS.gene042508:intron 40.0%
GTTGAAGGAATAGGAGCTAA+AGG - chr7.2:20839421-20839440 None:intergenic 40.0%
GTTTGTCAAAGGAAGAGCTT+TGG - chr7.2:20839458-20839477 None:intergenic 40.0%
TCATCACTTTGTGACACAAC+AGG - chr7.2:20839850-20839869 None:intergenic 40.0%
TCCTTTGACAAACCCTGAAA+AGG + chr7.2:20839465-20839484 MS.gene042508:CDS 40.0%
TGAGATATTGGACCTATTGG+TGG - chr7.2:20840907-20840926 None:intergenic 40.0%
TGATCATGGCTAGAAGACAT+AGG + chr7.2:20840206-20840225 MS.gene042508:CDS 40.0%
TGCGGTAAAATGTAGGCAAT+TGG + chr7.2:20840538-20840557 MS.gene042508:intron 40.0%
! AAAGCACCCATCTTCTACTT+TGG - chr7.2:20839524-20839543 None:intergenic 40.0%
! CAAATCTAGAGAAAGTGTGG+TGG + chr7.2:20840737-20840756 MS.gene042508:CDS 40.0%
!! AAGGAGCTTGTTGCTGAATA+TGG + chr7.2:20839676-20839695 MS.gene042508:CDS 40.0%
!! AGCTCTGTTTCTGTGAAAGT+TGG + chr7.2:20839598-20839617 MS.gene042508:CDS 40.0%
!! AGCTTTGTTCTAGAGGTCAT+TGG + chr7.2:20839629-20839648 MS.gene042508:CDS 40.0%
!! ATGACCTCTAGAACAAAGCT+TGG - chr7.2:20839629-20839648 None:intergenic 40.0%
!! TACTCCAAGCTTTGTTCTAG+AGG + chr7.2:20839622-20839641 MS.gene042508:CDS 40.0%
AGGAGTGAGTGAGAGATTAG+TGG - chr7.2:20840368-20840387 None:intergenic 45.0%
AGTAGAAGATGGGTGCTTTG+AGG + chr7.2:20839525-20839544 MS.gene042508:CDS 45.0%
CTCTTCTTCCTCCTCAGAAA+AGG - chr7.2:20840086-20840105 None:intergenic 45.0%
CTGAGTCAGTTACCACCAAT+AGG + chr7.2:20840892-20840911 MS.gene042508:CDS 45.0%
GTATGTTCAGAATCACGACG+AGG + chr7.2:20840611-20840630 MS.gene042508:intron 45.0%
GTTCCAGTTGAGAATCACCA+AGG + chr7.2:20840406-20840425 MS.gene042508:CDS 45.0%
GTTGAGAATCACCAAGGCTA+TGG + chr7.2:20840412-20840431 MS.gene042508:CDS 45.0%
! AGAAAGTGTGGTGGCAACTA+GGG + chr7.2:20840746-20840765 MS.gene042508:CDS 45.0%
! TAGCCTTGGTGATTCTCAAC+TGG - chr7.2:20840412-20840431 None:intergenic 45.0%
!! CCCTTTTCAGGGTTTGTCAA+AGG - chr7.2:20839469-20839488 None:intergenic 45.0%
!! TTGCTAGACTTTTTCCAGGG+AGG + chr7.2:20840152-20840171 MS.gene042508:CDS 45.0%
!!! TTTAATATTTTCTTAAAAAT+GGG - chr7.2:20839764-20839783 None:intergenic 5.0%
ACTGCATTATCTGTCCTCCC+TGG - chr7.2:20840169-20840188 None:intergenic 50.0%
! GAGAAAGTGTGGTGGCAACT+AGG + chr7.2:20840745-20840764 MS.gene042508:CDS 50.0%
!! GATGGGTGCTTTGAGGTTCA+AGG + chr7.2:20839532-20839551 MS.gene042508:CDS 50.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 20839370 20841016 20839370 ID=MS.gene042508
chr7.2 mRNA 20839370 20841016 20839370 ID=MS.gene042508.t1;Parent=MS.gene042508
chr7.2 exon 20839370 20839745 20839370 ID=MS.gene042508.t1.exon1;Parent=MS.gene042508.t1
chr7.2 CDS 20839370 20839745 20839370 ID=cds.MS.gene042508.t1;Parent=MS.gene042508.t1
chr7.2 exon 20840026 20840445 20840026 ID=MS.gene042508.t1.exon2;Parent=MS.gene042508.t1
chr7.2 CDS 20840026 20840445 20840026 ID=cds.MS.gene042508.t1;Parent=MS.gene042508.t1
chr7.2 exon 20840736 20841016 20840736 ID=MS.gene042508.t1.exon3;Parent=MS.gene042508.t1
chr7.2 CDS 20840736 20841016 20840736 ID=cds.MS.gene042508.t1;Parent=MS.gene042508.t1
Gene Sequence

>MS.gene042508

ATGACTTCACAAAAGTTCAACAATGGTGATATCAATATGAGTCTTTTTCCTTTAGCTCCTATTCCTTCAACTTATCTTGTGGATTCCAAAGCTCTTCCTTTGACAAACCCTGAAAAGGGTCTTCAGATTTTGAGACCCTCAATGTTTAAGTCCAAAGTAGAAGATGGGTGCTTTGAGGTTCAAGGAAAAAACCTGTCTTTGAAACTTGGTAATGAAGTAGAAGATAAAAGCTCTGTTTCTGTGAAAGTTGGATACTCCAAGCTTTGTTCTAGAGGTCATTGGAGACCAATAGAAGATGCTAAACTTAAGGAGCTTGTTGCTGAATATGGTCCTCAAAATTGGAACTTGATTGCAGAACATCTTGAAGGAAGATCAGGTAATTCATCCTCACCCCATTTTTAAGAAAATATTAAAGTTTATGTTTAGATGAATTCTAGAGTAAGTGCATGTTTGGATTTAGGAAGAGCTTAGCATAATCCTGTTGTGTCACAAAGTGATGATATTAACTAAAGTTGCATTTTTTAACTTCAACAAAATCAACATATCAATGTGATTTTAAAGTATTTTTTTGTAGTATTGTTTCTAAAGTTCAATACTTTTTTAATACTTTTTTTGCATGTATTTTAATATATTTTTGTTTTCAATTTTAATTGCAGGAAAAAGTTGTAGATTGAGGTGGTTCAATCAGTTAGACCCAAGAATCAACAAAAAAACCTTTTCTGAGGAGGAAGAAGAGAGACTTTTATCTGCTCATAAAATGTATGGTAACAAATGGGCTATAATTGCTAGACTTTTTCCAGGGAGGACAGATAATGCAGTGAAGAATCATTGGCATGTGATCATGGCTAGAAGACATAGGGAACAGTGTACTGTGTATAGAAGGAGAAAGCCTGTTGTTGTTGAAAGTCTTTCAAAGGATTTAAAATTAAGTCTTTCAAACAATGCAGCTAGTGATTCAACTATCTCAAGCACCATTGATGGAATTGTCTCAACTTCCACTAATCTCTCACTCACTCCTTCTTCAGCTAAACTAGTTGTTCCAGTTGAGAATCACCAAGGCTATGGATCACTAATTGGTATGCAATATTTAATAATCTCTCATTAGGCCTATAATAGTATAAAATATGGTTTTAAGTTGCGGTTACGATTCCGCTACAAATATTTATATTGCGGTAAAATGTAGGCAATTGGGCCGATGCCTTCGCATTTACAATTGTGATGTTTTTGTATATACTATAAGTGTATGTTCAGAATCACGACGAGGTTCACTGTAAATTTGCTAAACTATATTGTAGTTATTACTTTTTTCATGTCCAAATTTAATTGTTACATAACATATGTTACATTATGTGATGTGTAATTGCAGACAAATCTAGAGAAAGTGTGGTGGCAACTAGGGATGTGAATTTTGACAAGTATTTTGGAGCTTGTAAGAAGAATGAACAAGTGGAAAAACTAAAGCTAATAGATGTGGTGGTGGACCAGTCCAATTTTTCAGATTCAAACTCTGAAGTATCAGTATCTGAGTCAGTTACCACCAATAGGTCCAATATCTCAATTTCTGGTGAAAGTGAAAATGTTGGTGTTAAGATTAACATGTTACTACCATTCATTGATTTTCTTGGAGTAGGAGCTATACAAAGCTAA
Protein sequence

>MS.gene042508.t1

MTSQKFNNGDINMSLFPLAPIPSTYLVDSKALPLTNPEKGLQILRPSMFKSKVEDGCFEVQGKNLSLKLGNEVEDKSSVSVKVGYSKLCSRGHWRPIEDAKLKELVAEYGPQNWNLIAEHLEGRSGKSCRLRWFNQLDPRINKKTFSEEEEERLLSAHKMYGNKWAIIARLFPGRTDNAVKNHWHVIMARRHREQCTVYRRRKPVVVESLSKDLKLSLSNNAASDSTISSTIDGIVSTSTNLSLTPSSAKLVVPVENHQGYGSLIDKSRESVVATRDVNFDKYFGACKKNEQVEKLKLIDVVVDQSNFSDSNSEVSVSESVTTNRSNISISGESENVGVKINMLLPFIDFLGVGAIQS