AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene042665

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene042665.t1 MTR_1g093095 70.120 251 60 5 20 268 23 260 7.35e-116 336
MS.gene042665.t1 MTR_4g059870 33.000 200 123 6 63 260 4 194 4.46e-23 99.4
MS.gene042665.t1 MTR_1g016010 35.057 174 101 6 88 259 33 196 9.04e-22 95.1
MS.gene042665.t1 MTR_1g094115 38.095 147 78 6 122 266 56 191 9.32e-22 95.5
MS.gene042665.t1 MTR_1g094115 36.306 157 87 6 112 266 63 208 1.40e-21 95.1
MS.gene042665.t1 MTR_8g017210 34.868 152 86 5 119 268 85 225 3.44e-21 94.0
MS.gene042665.t1 MTR_2g099990 35.443 158 88 6 107 262 58 203 5.73e-21 93.2
MS.gene042665.t1 MTR_2g093960 38.571 140 76 4 119 257 55 185 1.13e-20 91.7
MS.gene042665.t1 MTR_1g112270 35.374 147 84 4 117 262 65 201 1.25e-20 92.4
MS.gene042665.t1 MTR_1g112270 35.374 147 84 4 117 262 76 212 1.48e-20 92.0
MS.gene042665.t1 MTR_2g099990 35.417 144 82 4 120 262 1 134 4.88e-20 89.7
MS.gene042665.t1 MTR_2g090745 36.943 157 86 7 112 266 23 168 5.64e-20 90.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene042665.t1 AT1G13290 67.181 259 65 5 20 277 12 251 3.04e-117 340
MS.gene042665.t1 AT3G57670 72.632 190 40 2 107 296 199 376 4.09e-101 301
MS.gene042665.t1 AT1G51220 54.074 270 80 5 58 291 75 336 7.27e-100 297
MS.gene042665.t1 AT3G20880 63.594 217 46 4 53 263 204 393 1.46e-97 293
MS.gene042665.t1 AT1G08290 70.056 177 45 1 109 285 164 332 7.90e-96 286
MS.gene042665.t1 AT1G34790 63.333 210 64 3 75 272 83 291 1.59e-91 274
MS.gene042665.t1 AT1G34370 38.235 170 91 6 107 263 9 177 5.59e-27 107
MS.gene042665.t1 AT1G34370 40.397 151 83 5 119 263 238 387 1.60e-26 109
MS.gene042665.t1 AT1G34370 40.397 151 83 5 119 263 238 387 1.60e-26 109
MS.gene042665.t1 AT5G22890 39.785 186 94 11 90 263 181 360 1.13e-24 102
MS.gene042665.t1 AT5G66730 32.673 202 121 6 70 267 4 194 1.05e-22 98.2
MS.gene042665.t1 AT1G55110 37.013 154 85 5 117 268 84 227 4.45e-22 96.3
MS.gene042665.t1 AT1G55110 37.013 154 85 5 117 268 84 227 4.45e-22 96.3
MS.gene042665.t1 AT1G55110 37.013 154 85 5 117 268 84 227 4.45e-22 96.3
MS.gene042665.t1 AT3G50700 32.673 202 123 5 70 268 6 197 9.11e-22 95.1
MS.gene042665.t1 AT5G03150 37.063 143 80 4 119 260 76 209 1.18e-21 95.1
MS.gene042665.t1 AT5G44160 33.523 176 106 4 93 267 34 199 1.60e-21 94.7
MS.gene042665.t1 AT2G02080 37.255 153 83 5 117 267 75 216 1.60e-21 95.1
MS.gene042665.t1 AT2G02080 37.255 153 83 5 117 267 75 216 1.60e-21 95.1
MS.gene042665.t1 AT2G02080 37.255 153 83 5 117 267 75 216 1.60e-21 95.1
MS.gene042665.t1 AT2G02080 37.255 153 83 5 117 267 75 216 1.60e-21 95.1
MS.gene042665.t1 AT2G02070 37.255 153 83 5 117 267 73 214 2.01e-21 94.7
MS.gene042665.t1 AT2G02070 37.255 153 83 5 117 267 73 214 2.01e-21 94.7
MS.gene042665.t1 AT1G03840 33.523 176 106 5 93 267 38 203 2.47e-21 94.4
MS.gene042665.t1 AT1G03840 34.091 176 103 7 93 267 38 201 4.47e-21 93.6
MS.gene042665.t1 AT5G44160 36.000 150 85 4 119 267 21 160 4.95e-21 93.2
MS.gene042665.t1 AT2G02080 37.333 150 81 5 120 267 1 139 6.46e-21 92.8
MS.gene042665.t1 AT2G02080 37.333 150 81 5 120 267 1 139 6.46e-21 92.8
MS.gene042665.t1 AT1G14580 36.986 146 79 5 117 260 74 208 3.33e-20 90.9
MS.gene042665.t1 AT1G14580 36.986 146 79 5 117 260 74 208 3.33e-20 90.9
MS.gene042665.t1 AT1G14580 36.986 146 79 5 117 260 88 222 3.90e-20 90.9
MS.gene042665.t1 AT3G45260 35.333 150 87 4 119 267 62 202 5.22e-20 90.1
MS.gene042665.t1 AT3G45260 35.333 150 87 4 119 267 62 202 5.22e-20 90.1
MS.gene042665.t1 AT5G60470 32.227 211 122 7 56 262 9 202 5.92e-20 90.1
MS.gene042665.t1 AT5G60470 32.227 211 122 7 56 262 5 198 6.91e-20 89.7
MS.gene042665.t1 AT5G60470 37.241 145 81 5 119 262 58 193 8.10e-20 89.7
MS.gene042665.t1 AT3G13810 34.615 156 92 4 112 266 86 232 9.47e-20 89.7
MS.gene042665.t1 AT3G13810 34.615 156 92 4 112 266 86 232 9.47e-20 89.7
MS.gene042665.t1 AT3G13810 34.615 156 92 4 112 266 87 233 9.49e-20 89.7
MS.gene042665.t1 AT3G13810 35.099 151 88 4 117 266 86 227 1.01e-19 89.7
MS.gene042665.t1 AT3G13810 34.615 156 92 4 112 266 73 219 1.02e-19 89.7
MS.gene042665.t1 AT3G13810 35.099 151 88 4 117 266 72 213 1.08e-19 89.4
MS.gene042665.t1 AT4G02670 34.211 152 90 4 112 262 71 213 8.40e-19 86.3
MS.gene042665.t1 AT4G02670 34.211 152 90 4 112 262 69 211 8.79e-19 86.3
MS.gene042665.t1 AT1G25250 30.216 139 88 4 117 253 54 185 1.63e-11 64.7
MS.gene042665.t1 AT1G25250 30.216 139 88 4 117 253 31 162 1.66e-11 64.7

Find 66 sgRNAs with CRISPR-Local

Find 87 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTACTCCCCTTAGAGATTC+TGG 0.179929 5.2:+45792345 None:intergenic
CTCCTATTCAAGGTCAATAT+TGG 0.253994 5.2:-45793014 MS.gene042665:CDS
AAAGATCATGTTCGTGCTTT+CGG 0.314009 5.2:-45792057 MS.gene042665:CDS
GGTTTGTGGTTGTGTGTTCC+AGG 0.317646 5.2:+45793234 None:intergenic
GAAAAGGACCAGAATCTCTA+AGG 0.322420 5.2:-45792353 MS.gene042665:CDS
TGATGATCAGGTTTACTAAT+AGG 0.342578 5.2:+45793048 None:intergenic
TCACTCTCACTTGGCCCTCC+TGG 0.348650 5.2:-45793252 MS.gene042665:CDS
TTTAATGTGGAGGATAGTTT+AGG 0.370427 5.2:+45793213 None:intergenic
TAGTAAACCTGATCATCATT+TGG 0.397302 5.2:-45793043 MS.gene042665:CDS
AGCATGGAGCGAAGCCATTC+GGG 0.401651 5.2:-45792197 MS.gene042665:CDS
TGGAGGATAGTTTAGGTTTG+TGG 0.408461 5.2:+45793220 None:intergenic
GGGAAACCATTTGCAGTTAG+AGG 0.410419 5.2:-45792162 MS.gene042665:CDS
GAAGATCAGGAAGTATTGTT+AGG 0.411354 5.2:-45792000 MS.gene042665:CDS
TTGGCTTCAGCTCCTATTCA+AGG 0.424273 5.2:-45793024 MS.gene042665:CDS
AAGCATGGAGCGAAGCCATT+CGG 0.440022 5.2:-45792198 MS.gene042665:CDS
CATGTTCGTGCTTTCGGTGA+TGG 0.445219 5.2:-45792051 MS.gene042665:CDS
GTCATTATTAGTTTCAATTG+AGG 0.447268 5.2:+45793296 None:intergenic
AGTTTCAATTGAGGATATGT+TGG 0.454073 5.2:+45793305 None:intergenic
ACCACTTTGCTCATCATCAA+TGG 0.458380 5.2:+45793125 None:intergenic
CGTCGAGAGTTGTGAAGATC+AGG 0.460359 5.2:-45792013 MS.gene042665:CDS
TCACCTGCTCAAATCCTCAT+TGG 0.461696 5.2:-45792985 MS.gene042665:CDS
CAACCGTTTCAATAATATGC+AGG 0.466033 5.2:-45792923 MS.gene042665:intron
CAGTCACCTCTAACTGCAAA+TGG 0.466119 5.2:+45792156 None:intergenic
AGTAGAAGAGTGATTTAATG+TGG 0.470478 5.2:+45793200 None:intergenic
TCTTCCATTTCACTCTCACT+TGG 0.472544 5.2:-45793261 MS.gene042665:CDS
GCTGAAGCCAAATGATGATC+AGG 0.472827 5.2:+45793036 None:intergenic
ATCCAATATTGACCTTGAAT+AGG 0.474167 5.2:+45793012 None:intergenic
TAACCTGCATATTATTGAAA+CGG 0.475929 5.2:+45792920 None:intergenic
TCCTTGAGTGGCCTTGACCT+TGG 0.476401 5.2:+45792252 None:intergenic
AGTCTTAACATTGATGAAGC+TGG 0.481814 5.2:+45792321 None:intergenic
AGGGCCAAGTGAGAGTGAAA+TGG 0.483147 5.2:+45793257 None:intergenic
GTATATATCAGATGCATATG+TGG 0.492007 5.2:-45792395 MS.gene042665:intron
CCTTGCTATTGCTGTGCAGA+GGG 0.509164 5.2:-45792297 MS.gene042665:CDS
TATATATCAGATGCATATGT+GGG 0.512415 5.2:-45792394 MS.gene042665:intron
TCCTTGCTATTGCTGTGCAG+AGG 0.519467 5.2:-45792298 MS.gene042665:CDS
CAGATGCATATGTGGGGACA+TGG 0.520986 5.2:-45792387 MS.gene042665:CDS
CATGGATCACAATACAGAAA+AGG 0.532079 5.2:-45792369 MS.gene042665:CDS
GAATATGACGAGGAATTTGA+AGG 0.538705 5.2:-45791973 MS.gene042665:CDS
GGAGAATGTGTGAGCTTGCA+TGG 0.548279 5.2:+45793326 None:intergenic
CACTTCAAACACACTACAAG+AGG 0.550716 5.2:-45792221 MS.gene042665:CDS
TGTGGTTGTGTGTTCCAGGA+GGG 0.551458 5.2:+45793238 None:intergenic
TCACAACTCTCGACGGTGTG+TGG 0.553384 5.2:+45792021 None:intergenic
AAAAGGACCAGAATCTCTAA+GGG 0.555739 5.2:-45792352 MS.gene042665:CDS
TCCAAGGTCAAGGCCACTCA+AGG 0.567553 5.2:-45792253 MS.gene042665:CDS
CATTTGCAGTTAGAGGTGAC+TGG 0.568578 5.2:-45792155 MS.gene042665:CDS
CCCTCTGCACAGCAATAGCA+AGG 0.583701 5.2:+45792297 None:intergenic
ATGAGGATTTGAGCAGGTGA+AGG 0.587509 5.2:+45792988 None:intergenic
CCATTCGGGTGTAGAAAGTG+TGG 0.590964 5.2:-45792183 MS.gene042665:CDS
ACACACTACAAGAGGAAGCA+TGG 0.591744 5.2:-45792213 MS.gene042665:CDS
AGAACAACATAGAGCATCCA+AGG 0.593445 5.2:-45792269 MS.gene042665:CDS
CCACACTTTCTACACCCGAA+TGG 0.593700 5.2:+45792183 None:intergenic
TAATGATAACATCAATCGAA+TGG 0.599548 5.2:-45791923 MS.gene042665:CDS
CTGATCTTCACAACTCTCGA+CGG 0.614391 5.2:+45792014 None:intergenic
ACAGTGCAAGAGAACTGTGT+TGG 0.625514 5.2:+45792961 None:intergenic
AGAAGAGTGATTTAATGTGG+AGG 0.629008 5.2:+45793203 None:intergenic
GGTCCAATGAGGATTTGAGC+AGG 0.629341 5.2:+45792982 None:intergenic
ACATAGAGCATCCAAGGTCA+AGG 0.630952 5.2:-45792263 MS.gene042665:CDS
TTGTGGTTGTGTGTTCCAGG+AGG 0.639378 5.2:+45793237 None:intergenic
AGAACTGTGTTGGTCCAATG+AGG 0.645090 5.2:+45792971 None:intergenic
AGTGTTCTGAAATCCTTGAG+TGG 0.647415 5.2:+45792240 None:intergenic
GTAACAGTTGCACTTCACAT+TGG 0.647512 5.2:-45793102 MS.gene042665:CDS
CATTCGGGTGTAGAAAGTGT+GGG 0.658306 5.2:-45792182 MS.gene042665:CDS
ACCATTGATGATGAGCAAAG+TGG 0.669448 5.2:-45793126 MS.gene042665:CDS
GTTAGGTGATGAATATGACG+AGG 0.714430 5.2:-45791983 MS.gene042665:CDS
ATATATCAGATGCATATGTG+GGG 0.720271 5.2:-45792393 MS.gene042665:intron
AAAGGACCAGAATCTCTAAG+GGG 0.721082 5.2:-45792351 MS.gene042665:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAAAAAAAAGTTCACTAA+AGG + chr5.2:45792466-45792485 None:intergenic 20.0%
!!! ATTGTTCATTTTTATCTTCT+AGG + chr5.2:45792712-45792731 None:intergenic 20.0%
! TAACCTGCATATTATTGAAA+CGG + chr5.2:45792316-45792335 None:intergenic 25.0%
! TAATGATAACATCAATCGAA+TGG - chr5.2:45793310-45793329 MS.gene042665:CDS 25.0%
! TATATATCAGATGCATATGT+GGG - chr5.2:45792839-45792858 MS.gene042665:intron 25.0%
!! AAATGACAAAATTTTGTGCT+TGG + chr5.2:45792771-45792790 None:intergenic 25.0%
!! GTCATTATTAGTTTCAATTG+AGG + chr5.2:45791940-45791959 None:intergenic 25.0%
!!! AGGAGTATTGACAAATTTTT+TGG + chr5.2:45792629-45792648 None:intergenic 25.0%
!!! CTAGTTCTTGACAAATTTTA+TGG + chr5.2:45792592-45792611 None:intergenic 25.0%
AACGATTCAAGATGGTATTA+GGG + chr5.2:45792522-45792541 None:intergenic 30.0%
AGTAGAAGAGTGATTTAATG+TGG + chr5.2:45792036-45792055 None:intergenic 30.0%
AGTTTCAATTGAGGATATGT+TGG + chr5.2:45791931-45791950 None:intergenic 30.0%
ATATATCAGATGCATATGTG+GGG - chr5.2:45792840-45792859 MS.gene042665:intron 30.0%
ATCCAATATTGACCTTGAAT+AGG + chr5.2:45792224-45792243 None:intergenic 30.0%
ATGTCCTAATGCATACTATA+TGG - chr5.2:45792652-45792671 MS.gene042665:intron 30.0%
GTATATATCAGATGCATATG+TGG - chr5.2:45792838-45792857 MS.gene042665:intron 30.0%
TAACGATTCAAGATGGTATT+AGG + chr5.2:45792523-45792542 None:intergenic 30.0%
TAGTAAACCTGATCATCATT+TGG - chr5.2:45792190-45792209 MS.gene042665:CDS 30.0%
TCTTCCATATAGTATGCATT+AGG + chr5.2:45792659-45792678 None:intergenic 30.0%
TGATGATCAGGTTTACTAAT+AGG + chr5.2:45792188-45792207 None:intergenic 30.0%
TTTAATGTGGAGGATAGTTT+AGG + chr5.2:45792023-45792042 None:intergenic 30.0%
! AAAGTGTTAACGATTCAAGA+TGG + chr5.2:45792530-45792549 None:intergenic 30.0%
! AACATCAATCGAATGGTTTT+CGG - chr5.2:45793317-45793336 MS.gene042665:CDS 30.0%
! CAATGGTAAAGTTTTGCTTT+TGG + chr5.2:45792094-45792113 None:intergenic 30.0%
! TGTTGTGTTTTGTGAAATGT+TGG + chr5.2:45792165-45792184 None:intergenic 30.0%
AAAAGGACCAGAATCTCTAA+GGG - chr5.2:45792881-45792900 MS.gene042665:intron 35.0%
AAAGATCATGTTCGTGCTTT+CGG - chr5.2:45793176-45793195 MS.gene042665:CDS 35.0%
AGAAAAACTGTGGAAAGCTT+TGG - chr5.2:45793111-45793130 MS.gene042665:CDS 35.0%
AGAACACATGAGAAAAACTG+TGG - chr5.2:45793101-45793120 MS.gene042665:CDS 35.0%
AGAAGAGTGATTTAATGTGG+AGG + chr5.2:45792033-45792052 None:intergenic 35.0%
AGTATGCATTAGGACATTGA+AGG + chr5.2:45792649-45792668 None:intergenic 35.0%
AGTCTTAACATTGATGAAGC+TGG + chr5.2:45792915-45792934 None:intergenic 35.0%
CAACCGTTTCAATAATATGC+AGG - chr5.2:45792310-45792329 MS.gene042665:CDS 35.0%
CATGGATCACAATACAGAAA+AGG - chr5.2:45792864-45792883 MS.gene042665:intron 35.0%
CTCCTATTCAAGGTCAATAT+TGG - chr5.2:45792219-45792238 MS.gene042665:CDS 35.0%
GAATATGACGAGGAATTTGA+AGG - chr5.2:45793260-45793279 MS.gene042665:CDS 35.0%
TGTATCTTGAACTACTAGCT+AGG + chr5.2:45792393-45792412 None:intergenic 35.0%
! GTGTTTTGTGAAATGTTGGT+TGG + chr5.2:45792161-45792180 None:intergenic 35.0%
!! GAAGATCAGGAAGTATTGTT+AGG - chr5.2:45793233-45793252 MS.gene042665:CDS 35.0%
!! TGGTAAAGTTTTGCTTTTGG+TGG + chr5.2:45792091-45792110 None:intergenic 35.0%
!!! AAGCTTTGGTTTTGTATCTG+TGG - chr5.2:45793125-45793144 MS.gene042665:CDS 35.0%
AAAGGACCAGAATCTCTAAG+GGG - chr5.2:45792882-45792901 MS.gene042665:intron 40.0%
ACCACTTTGCTCATCATCAA+TGG + chr5.2:45792111-45792130 None:intergenic 40.0%
AGCTAGGCAATAGACAGTTT+AGG + chr5.2:45792377-45792396 None:intergenic 40.0%
CACTTCAAACACACTACAAG+AGG - chr5.2:45793012-45793031 MS.gene042665:CDS 40.0%
GAAAAGGACCAGAATCTCTA+AGG - chr5.2:45792880-45792899 MS.gene042665:intron 40.0%
GTAACAGTTGCACTTCACAT+TGG - chr5.2:45792131-45792150 MS.gene042665:CDS 40.0%
GTTAGGTGATGAATATGACG+AGG - chr5.2:45793250-45793269 MS.gene042665:CDS 40.0%
TCTTCCATTTCACTCTCACT+TGG - chr5.2:45791972-45791991 MS.gene042665:CDS 40.0%
TTTACTCCCCTTAGAGATTC+TGG + chr5.2:45792891-45792910 None:intergenic 40.0%
! AGAACAACATAGAGCATCCA+AGG - chr5.2:45792964-45792983 MS.gene042665:CDS 40.0%
! TGGAGGATAGTTTAGGTTTG+TGG + chr5.2:45792016-45792035 None:intergenic 40.0%
!! ACCATTGATGATGAGCAAAG+TGG - chr5.2:45792107-45792126 MS.gene042665:CDS 40.0%
!! AGTGTTCTGAAATCCTTGAG+TGG + chr5.2:45792996-45793015 None:intergenic 40.0%
ACACACTACAAGAGGAAGCA+TGG - chr5.2:45793020-45793039 MS.gene042665:CDS 45.0%
ACAGTGCAAGAGAACTGTGT+TGG + chr5.2:45792275-45792294 None:intergenic 45.0%
ATGAGGATTTGAGCAGGTGA+AGG + chr5.2:45792248-45792267 None:intergenic 45.0%
CAGTCACCTCTAACTGCAAA+TGG + chr5.2:45793080-45793099 None:intergenic 45.0%
CATTTGCAGTTAGAGGTGAC+TGG - chr5.2:45793078-45793097 MS.gene042665:CDS 45.0%
CTGATCTTCACAACTCTCGA+CGG + chr5.2:45793222-45793241 None:intergenic 45.0%
GCTGAAGCCAAATGATGATC+AGG + chr5.2:45792200-45792219 None:intergenic 45.0%
GGGAAACCATTTGCAGTTAG+AGG - chr5.2:45793071-45793090 MS.gene042665:CDS 45.0%
TCACCTGCTCAAATCCTCAT+TGG - chr5.2:45792248-45792267 MS.gene042665:CDS 45.0%
TTGGCTTCAGCTCCTATTCA+AGG - chr5.2:45792209-45792228 MS.gene042665:CDS 45.0%
! ACATAGAGCATCCAAGGTCA+AGG - chr5.2:45792970-45792989 MS.gene042665:CDS 45.0%
! AGAACTGTGTTGGTCCAATG+AGG + chr5.2:45792265-45792284 None:intergenic 45.0%
! CATTCGGGTGTAGAAAGTGT+GGG - chr5.2:45793051-45793070 MS.gene042665:CDS 45.0%
!!! TTTTTATAAATAAATATTAG+TGG - chr5.2:45792551-45792570 MS.gene042665:intron 5.0%
AAGCATGGAGCGAAGCCATT+CGG - chr5.2:45793035-45793054 MS.gene042665:CDS 50.0%
AGGGCCAAGTGAGAGTGAAA+TGG + chr5.2:45791979-45791998 None:intergenic 50.0%
CAGATGCATATGTGGGGACA+TGG - chr5.2:45792846-45792865 MS.gene042665:intron 50.0%
CATGTTCGTGCTTTCGGTGA+TGG - chr5.2:45793182-45793201 MS.gene042665:CDS 50.0%
CCACACTTTCTACACCCGAA+TGG + chr5.2:45793053-45793072 None:intergenic 50.0%
CCATTCGGGTGTAGAAAGTG+TGG - chr5.2:45793050-45793069 MS.gene042665:CDS 50.0%
CGTCGAGAGTTGTGAAGATC+AGG - chr5.2:45793220-45793239 MS.gene042665:CDS 50.0%
GGTCCAATGAGGATTTGAGC+AGG + chr5.2:45792254-45792273 None:intergenic 50.0%
GGTTTGTGGTTGTGTGTTCC+AGG + chr5.2:45792002-45792021 None:intergenic 50.0%
TGTGGTTGTGTGTTCCAGGA+GGG + chr5.2:45791998-45792017 None:intergenic 50.0%
TTGTGGTTGTGTGTTCCAGG+AGG + chr5.2:45791999-45792018 None:intergenic 50.0%
!! CCTTGCTATTGCTGTGCAGA+GGG - chr5.2:45792936-45792955 MS.gene042665:CDS 50.0%
!! TCCTTGCTATTGCTGTGCAG+AGG - chr5.2:45792935-45792954 MS.gene042665:CDS 50.0%
AGCATGGAGCGAAGCCATTC+GGG - chr5.2:45793036-45793055 MS.gene042665:CDS 55.0%
CCCTCTGCACAGCAATAGCA+AGG + chr5.2:45792939-45792958 None:intergenic 55.0%
TCACAACTCTCGACGGTGTG+TGG + chr5.2:45793215-45793234 None:intergenic 55.0%
TCCAAGGTCAAGGCCACTCA+AGG - chr5.2:45792980-45792999 MS.gene042665:CDS 55.0%
! TCCTTGAGTGGCCTTGACCT+TGG + chr5.2:45792984-45793003 None:intergenic 55.0%
TCACTCTCACTTGGCCCTCC+TGG - chr5.2:45791981-45792000 MS.gene042665:CDS 60.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 45791909 45793346 45791909 ID=MS.gene042665
chr5.2 mRNA 45791909 45793346 45791909 ID=MS.gene042665.t1;Parent=MS.gene042665
chr5.2 exon 45792924 45793346 45792924 ID=MS.gene042665.t1.exon1;Parent=MS.gene042665.t1
chr5.2 CDS 45792924 45793346 45792924 ID=cds.MS.gene042665.t1;Parent=MS.gene042665.t1
chr5.2 exon 45791909 45792406 45791909 ID=MS.gene042665.t1.exon2;Parent=MS.gene042665.t1
chr5.2 CDS 45791909 45792406 45791909 ID=cds.MS.gene042665.t1;Parent=MS.gene042665.t1
Gene Sequence

>MS.gene042665

ATGCAAGCTCACACATTCTCCAACATATCCTCAATTGAAACTAATAATGACACTGTTGATGAGTCTTCCATTTCACTCTCACTTGGCCCTCCTGGAACACACAACCACAAACCTAAACTATCCTCCACATTAAATCACTCTTCTACTACTCTTCTTCATCATCATCATAATCATAATCACCACCAAAAGCAAAACTTTACCATTGATGATGAGCAAAGTGGTGTAACAGTTGCACTTCACATTGGTCTTCCAACCAACATTTCACAAAACACAACACCTATTAGTAAACCTGATCATCATTTGGCTTCAGCTCCTATTCAAGGTCAATATTGGATTCCTTCACCTGCTCAAATCCTCATTGGACCAACACAGTTCTCTTGCACTGTTTGCAATAAAATGTTCAACCGTTTCAATAATATGCAGGTTAGTCAACAAGTAACTTTTCATACTGTAGCATATACAATGCCTAAACTGTCTATTGCCTAGCTAGTAGTTCAAGATACACTCATAAGCATTTATTACAGAATTAATAAGTGAATTTTTTTTTTAAAACACCTTTAGTGAACTTTTTTTTTTGTCAAAGATTTATAATTTTAAATTTTCAGTCATTCCCTAATACCATCTTGAATCGTTAACACTTTTTTTTTATAAATAAATATTAGTGGTTAATTTGTTAAGAACCATAAAATTTGTCAAGAACTAGATAATTTGTTAGCACCAAAAAATTTGTCAATACTCCTTCAATGTCCTAATGCATACTATATGGAAGACTCATTAATTTGTTAACAAAAAAATACAAACCTAGAAGATAAAAATGAACAATTAAAAGTATTGTATTTAATTTAAAAAATGAACAGATCCAAGCACAAAATTTTGTCATTTTCTTTTGCACTTAACTATAAAGAACTATTTGAATGTAATGCATTTTTGTATATATCAGATGCATATGTGGGGACATGGATCACAATACAGAAAAGGACCAGAATCTCTAAGGGGAGTAAAACCAGCTTCATCAATGTTAAGACTTCCTTGCTATTGCTGTGCAGAGGGATGCAAGAACAACATAGAGCATCCAAGGTCAAGGCCACTCAAGGATTTCAGAACACTTCAAACACACTACAAGAGGAAGCATGGAGCGAAGCCATTCGGGTGTAGAAAGTGTGGGAAACCATTTGCAGTTAGAGGTGACTGGAGAACACATGAGAAAAACTGTGGAAAGCTTTGGTTTTGTATCTGTGGATCTGATTTCAAACACAAGAGATCTCTTAAAGATCATGTTCGTGCTTTCGGTGATGGTCATGCTCCACACACCGTCGAGAGTTGTGAAGATCAGGAAGTATTGTTAGGTGATGAATATGACGAGGAATTTGAAGGAGATGAAAATTATGAAGACGATGATGATAATGATAACATCAATCGAATGGTTTTCGGTTTTTAA
Protein sequence

>MS.gene042665.t1

MQAHTFSNISSIETNNDTVDESSISLSLGPPGTHNHKPKLSSTLNHSSTTLLHHHHNHNHHQKQNFTIDDEQSGVTVALHIGLPTNISQNTTPISKPDHHLASAPIQGQYWIPSPAQILIGPTQFSCTVCNKMFNRFNNMQMHMWGHGSQYRKGPESLRGVKPASSMLRLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVESCEDQEVLLGDEYDEEFEGDENYEDDDDNDNINRMVFGF