Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042678.t1 | XP_003614420.1 | 97.1 | 445 | 13 | 0 | 1 | 445 | 1 | 445 | 7.30E-241 | 842.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042678.t1 | Q6NQK2 | 58.7 | 462 | 156 | 10 | 1 | 442 | 1 | 447 | 1.6e-135 | 484.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042678.t1 | G7JX37 | 97.1 | 445 | 13 | 0 | 1 | 445 | 1 | 445 | 5.2e-241 | 842.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene042678.t1 | TF | NAC |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042678.t1 | MTR_5g053430 | 97.528 | 445 | 11 | 0 | 1 | 445 | 1 | 445 | 0.0 | 901 |
| MS.gene042678.t1 | MTR_5g053430 | 96.854 | 445 | 11 | 1 | 1 | 445 | 1 | 442 | 0.0 | 890 |
| MS.gene042678.t1 | MTR_1g093680 | 62.083 | 480 | 142 | 8 | 2 | 444 | 4 | 480 | 0.0 | 572 |
| MS.gene042678.t1 | MTR_1g093670 | 51.990 | 402 | 129 | 9 | 41 | 440 | 6 | 345 | 7.32e-124 | 363 |
| MS.gene042678.t1 | MTR_7g033320 | 54.425 | 226 | 79 | 3 | 6 | 219 | 5 | 218 | 9.70e-83 | 263 |
| MS.gene042678.t1 | MTR_2g014680 | 49.402 | 251 | 117 | 4 | 34 | 274 | 27 | 277 | 4.61e-76 | 240 |
| MS.gene042678.t1 | MTR_4g088245 | 58.586 | 198 | 79 | 2 | 36 | 230 | 44 | 241 | 1.05e-75 | 239 |
| MS.gene042678.t1 | MTR_8g102240 | 59.162 | 191 | 68 | 3 | 36 | 218 | 27 | 215 | 1.24e-72 | 236 |
| MS.gene042678.t1 | MTR_8g102240 | 59.162 | 191 | 68 | 3 | 36 | 218 | 27 | 215 | 1.27e-72 | 236 |
| MS.gene042678.t1 | MTR_8g069160 | 60.556 | 180 | 68 | 2 | 36 | 212 | 44 | 223 | 2.53e-72 | 228 |
| MS.gene042678.t1 | MTR_4g078875 | 55.330 | 197 | 83 | 2 | 32 | 223 | 19 | 215 | 2.14e-68 | 219 |
| MS.gene042678.t1 | MTR_2g090735 | 55.446 | 202 | 86 | 2 | 32 | 229 | 20 | 221 | 6.55e-64 | 207 |
| MS.gene042678.t1 | MTR_6g084430 | 30.168 | 179 | 107 | 6 | 58 | 233 | 5 | 168 | 4.12e-14 | 73.6 |
| MS.gene042678.t1 | MTR_2157s0010 | 28.796 | 191 | 104 | 8 | 56 | 229 | 6 | 181 | 6.18e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042678.t1 | AT1G25580 | 57.451 | 463 | 162 | 10 | 1 | 443 | 1 | 448 | 1.35e-176 | 502 |
| MS.gene042678.t1 | AT3G01600 | 55.856 | 222 | 91 | 4 | 5 | 224 | 4 | 220 | 7.26e-79 | 249 |
| MS.gene042678.t1 | AT5G14490 | 51.210 | 248 | 110 | 5 | 5 | 250 | 4 | 242 | 1.71e-77 | 245 |
| MS.gene042678.t1 | AT5G14490 | 51.210 | 248 | 110 | 5 | 5 | 250 | 4 | 242 | 1.97e-77 | 243 |
| MS.gene042678.t1 | AT5G14490 | 51.210 | 248 | 110 | 5 | 5 | 250 | 7 | 245 | 2.91e-77 | 244 |
| MS.gene042678.t1 | AT5G14490 | 51.210 | 248 | 110 | 5 | 5 | 250 | 7 | 245 | 5.27e-77 | 244 |
| MS.gene042678.t1 | AT4G29230 | 58.333 | 192 | 69 | 2 | 36 | 218 | 28 | 217 | 5.21e-74 | 239 |
| MS.gene042678.t1 | AT4G29230 | 58.333 | 192 | 69 | 2 | 36 | 218 | 28 | 217 | 1.83e-73 | 239 |
| MS.gene042678.t1 | AT4G29230 | 58.333 | 192 | 68 | 2 | 36 | 218 | 28 | 216 | 3.24e-73 | 238 |
| MS.gene042678.t1 | AT4G28500 | 51.556 | 225 | 103 | 4 | 5 | 223 | 2 | 226 | 9.00e-72 | 229 |
| MS.gene042678.t1 | AT1G28470 | 55.612 | 196 | 81 | 2 | 34 | 223 | 48 | 243 | 7.80e-71 | 227 |
| MS.gene042678.t1 | AT5G56620 | 54.872 | 195 | 75 | 4 | 36 | 218 | 22 | 215 | 2.38e-67 | 220 |
| MS.gene042678.t1 | AT5G56620 | 54.872 | 195 | 75 | 4 | 36 | 218 | 22 | 215 | 2.53e-67 | 221 |
| MS.gene042678.t1 | AT5G56620 | 54.872 | 195 | 75 | 4 | 36 | 218 | 22 | 215 | 5.78e-67 | 219 |
| MS.gene042678.t1 | AT3G18400 | 30.588 | 170 | 95 | 8 | 58 | 221 | 5 | 157 | 9.03e-14 | 72.4 |
| MS.gene042678.t1 | AT1G01720 | 26.754 | 228 | 131 | 10 | 58 | 272 | 7 | 211 | 7.18e-13 | 69.3 |
| MS.gene042678.t1 | AT3G12910 | 31.544 | 149 | 86 | 5 | 61 | 206 | 24 | 159 | 1.99e-11 | 65.1 |
| MS.gene042678.t1 | AT1G02220 | 31.250 | 160 | 90 | 6 | 59 | 215 | 4 | 146 | 2.53e-11 | 65.5 |
| MS.gene042678.t1 | AT5G53950 | 28.372 | 215 | 126 | 9 | 58 | 262 | 17 | 213 | 6.33e-11 | 64.3 |
Find 97 sgRNAs with CRISPR-Local
Find 287 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATAGTATGCTGACAATT+TGG | 0.134743 | 5.2:-45535530 | None:intergenic |
| AAAATACATGATCAGGATTT+TGG | 0.158079 | 5.2:+45536950 | MS.gene042678:CDS |
| CTTCTTCCACAGAGCAATTA+AGG | 0.224693 | 5.2:+45536898 | MS.gene042678:CDS |
| GGATCAAATTTGACACCTTT+TGG | 0.259342 | 5.2:-45536627 | None:intergenic |
| GAAAAGCTGAGAAAACTAAT+TGG | 0.286732 | 5.2:+45537080 | MS.gene042678:CDS |
| CAAGATAGCTTTATAGCATT+TGG | 0.294737 | 5.2:+45538854 | MS.gene042678:CDS |
| TTTGTGTTTATATAGGAATT+TGG | 0.295109 | 5.2:+45538827 | MS.gene042678:intron |
| TGAACCCCATTCAAGATTAC+TGG | 0.295214 | 5.2:-45537007 | None:intergenic |
| CATCTGATCAGGAGGTAATT+TGG | 0.312766 | 5.2:+45536649 | MS.gene042678:CDS |
| GGCTCAGGAGTCACAGATTT+GGG | 0.319343 | 5.2:-45537268 | None:intergenic |
| CAATAGTATGCTGACAATTT+GGG | 0.324090 | 5.2:-45535529 | None:intergenic |
| CCAACAGCAGCAAGTCAAAC+TGG | 0.324794 | 5.2:+45537177 | MS.gene042678:CDS |
| AGGCTCAGGAGTCACAGATT+TGG | 0.328067 | 5.2:-45537269 | None:intergenic |
| GACGTCCGCTGGCACAAAAC+TGG | 0.344109 | 5.2:+45536974 | MS.gene042678:CDS |
| TCTGTTGGATTCACAACAAC+TGG | 0.369929 | 5.2:+45538513 | MS.gene042678:CDS |
| ATCTTGAATGGGGTTCAAAA+AGG | 0.388213 | 5.2:+45537013 | MS.gene042678:CDS |
| TTATAGTGAAAGACAGTATT+CGG | 0.389524 | 5.2:+45537294 | MS.gene042678:CDS |
| ATTGTTGCTTCAATAGCTTC+AGG | 0.390657 | 5.2:-45537223 | None:intergenic |
| ACATTTGACTCTGCATTTGA+AGG | 0.393867 | 5.2:-45538700 | None:intergenic |
| GCAATTAAGGCTTATAATAC+TGG | 0.394443 | 5.2:+45536911 | MS.gene042678:CDS |
| TTTCTATATGCAGACCATCT+TGG | 0.411265 | 5.2:+45535408 | MS.gene042678:intron |
| GAATACTGTCTTTCACTATA+AGG | 0.423713 | 5.2:-45537292 | None:intergenic |
| ATATCCTTCTTCAGATGCTC+TGG | 0.424976 | 5.2:-45538649 | None:intergenic |
| CTAAACCAGTAATCTTGAAT+GGG | 0.425174 | 5.2:+45537002 | MS.gene042678:CDS |
| GTCACAGATTTGGGAGTAAC+CGG | 0.426136 | 5.2:-45537259 | None:intergenic |
| TCATCTTTACCATCTCTAGT+AGG | 0.429288 | 5.2:-45538580 | None:intergenic |
| ACTAAACCAGTAATCTTGAA+TGG | 0.433030 | 5.2:+45537001 | MS.gene042678:CDS |
| CAAATTTGATCCATCTGATC+AGG | 0.442832 | 5.2:+45536638 | MS.gene042678:CDS |
| CAGTATTCGGATGTAGATCT+AGG | 0.447710 | 5.2:+45537307 | MS.gene042678:CDS |
| AACAATAACAAAAGTGGATC+CGG | 0.448228 | 5.2:+45537240 | MS.gene042678:CDS |
| AGGAACAGAAGAGGATGAAA+AGG | 0.451744 | 5.2:+45537123 | MS.gene042678:CDS |
| GCAAGTCAAACTGGGTGATA+AGG | 0.457369 | 5.2:+45537186 | MS.gene042678:CDS |
| TGCATCGGGAGCATGTGATC+TGG | 0.461888 | 5.2:+45535469 | MS.gene042678:CDS |
| AAAAGCTGAGAAAACTAATT+GGG | 0.463490 | 5.2:+45537081 | MS.gene042678:CDS |
| GCCTCCTCAGATGAATTGTC+TGG | 0.464452 | 5.2:+45538303 | MS.gene042678:intron |
| GGAGTTTCGACTAAGTCAAT+TGG | 0.465851 | 5.2:+45538741 | MS.gene042678:CDS |
| AGGTTTACCTGGGGAATGGC+AGG | 0.470561 | 5.2:-45537340 | None:intergenic |
| GAGTGGCCTGGTTTGCCAAA+AGG | 0.477697 | 5.2:+45536612 | MS.gene042678:CDS |
| TCAAGTCTCTCCTCTATGGC+GGG | 0.485338 | 5.2:+45534714 | None:intergenic |
| TGAAGCAACAATAACAAAAG+TGG | 0.486548 | 5.2:+45537234 | MS.gene042678:CDS |
| CATAAATAGAAAGGCTGGGT+TGG | 0.487379 | 5.2:-45538615 | None:intergenic |
| ATTGAAAATAATCCTGATGA+TGG | 0.487705 | 5.2:+45538460 | MS.gene042678:CDS |
| CTTTCTATTTATGCTCAGCT+AGG | 0.488398 | 5.2:+45538625 | MS.gene042678:CDS |
| CTGAGCATAAATAGAAAGGC+TGG | 0.491378 | 5.2:-45538620 | None:intergenic |
| ACTCATCCTCAAAACTTGCC+AGG | 0.498733 | 5.2:+45536768 | MS.gene042678:CDS |
| CTGACAATTTGGGCAAGCCT+TGG | 0.506059 | 5.2:-45535519 | None:intergenic |
| GTTATGCATCAATATCATCT+AGG | 0.507798 | 5.2:+45537103 | MS.gene042678:CDS |
| ATTACTCTTGAAGTGAATGA+TGG | 0.508345 | 5.2:+45536735 | MS.gene042678:CDS |
| CTTTCACTATAAGGAGGCTC+AGG | 0.512409 | 5.2:-45537283 | None:intergenic |
| CCAGTTTGACTTGCTGCTGT+TGG | 0.516424 | 5.2:-45537177 | None:intergenic |
| TATATGCAGACCATCTTGGC+TGG | 0.517331 | 5.2:+45535412 | MS.gene042678:intron |
| ATGTCAGGTGTTAAGCAAGA+TGG | 0.522325 | 5.2:+45536863 | MS.gene042678:intron |
| AATGAAAATAATGCTGATGA+TGG | 0.526709 | 5.2:+45538409 | MS.gene042678:CDS |
| GTTCTGTATATGAGTAGTGC+AGG | 0.531845 | 5.2:+45537052 | MS.gene042678:CDS |
| TTGCTTGCAAAATGTGGTGT+TGG | 0.532555 | 5.2:+45536675 | MS.gene042678:CDS |
| TTTGCTTGCTCTTCACAATG+AGG | 0.533963 | 5.2:-45538337 | None:intergenic |
| CAATTTGGGCAAGCCTTGGT+AGG | 0.534551 | 5.2:-45535515 | None:intergenic |
| GTAGAAACTGAACATAATGA+AGG | 0.537204 | 5.2:+45538376 | MS.gene042678:CDS |
| ACTCTGCATTTGAAGGCTCA+AGG | 0.539581 | 5.2:-45538693 | None:intergenic |
| CTAGCTGAGCATAAATAGAA+AGG | 0.539748 | 5.2:-45538624 | None:intergenic |
| TTTAAGGTTTACCTGGGGAA+TGG | 0.539764 | 5.2:-45537344 | None:intergenic |
| TAGTGAATCACAAAATCTGT+TGG | 0.540122 | 5.2:+45538498 | MS.gene042678:CDS |
| TACCATCTCTAGTAGGAGAC+TGG | 0.544929 | 5.2:-45538573 | None:intergenic |
| TAATTGCTCTGTGGAAGAAG+TGG | 0.556020 | 5.2:-45536895 | None:intergenic |
| GTTGTAAGGTTGTAAAAGAG+TGG | 0.556602 | 5.2:+45536595 | MS.gene042678:intron |
| CAAATTACCTCCTGATCAGA+TGG | 0.556689 | 5.2:-45536648 | None:intergenic |
| AACTCATCAACGAAAGGATG+AGG | 0.560139 | 5.2:-45536708 | None:intergenic |
| AGGACCAGAGCATCTGAAGA+AGG | 0.560183 | 5.2:+45538645 | MS.gene042678:CDS |
| TGTAGAGAATGACACACCTT+CGG | 0.575337 | 5.2:+45538720 | MS.gene042678:CDS |
| AGCCAGTCTCCTACTAGAGA+TGG | 0.577237 | 5.2:+45538571 | MS.gene042678:CDS |
| ATTATGTTCAGTTTCTACCA+TGG | 0.577859 | 5.2:-45538371 | None:intergenic |
| TCCAGACAATTCATCTGAGG+AGG | 0.583627 | 5.2:-45538304 | None:intergenic |
| CAAGTCTCTCCTCTATGGCG+GGG | 0.593225 | 5.2:+45534715 | None:intergenic |
| AGACACACCTGCCATTCCCC+AGG | 0.594387 | 5.2:+45537333 | MS.gene042678:CDS |
| AAGGTTGTAAAAGAGTGGCC+TGG | 0.594766 | 5.2:+45536600 | MS.gene042678:intron |
| AGCAAAAGATGATCTATCCA+TGG | 0.596236 | 5.2:+45538354 | MS.gene042678:CDS |
| ATGCAGACCATCTTGGCTGG+TGG | 0.599205 | 5.2:+45535415 | MS.gene042678:intron |
| ATGATAAACTCATCAACGAA+AGG | 0.599805 | 5.2:-45536714 | None:intergenic |
| CAACAGCAGCAAGTCAAACT+GGG | 0.602243 | 5.2:+45537178 | MS.gene042678:CDS |
| TATATGAGTAGTGCAGGAGG+AGG | 0.609676 | 5.2:+45537058 | MS.gene042678:CDS |
| TGGCACTTGCTTGCAAAATG+TGG | 0.618127 | 5.2:+45536669 | MS.gene042678:CDS |
| TAGAAACTGAACATAATGAA+GGG | 0.620128 | 5.2:+45538377 | MS.gene042678:CDS |
| TCATCCAGACAATTCATCTG+AGG | 0.620597 | 5.2:-45538307 | None:intergenic |
| GTGATCTGGAAAATGTTACA+TGG | 0.621927 | 5.2:+45535483 | MS.gene042678:CDS |
| TGAGCATAAATAGAAAGGCT+GGG | 0.624006 | 5.2:-45538619 | None:intergenic |
| ACAGAAGAGGATGAAAAGGA+TGG | 0.629598 | 5.2:+45537127 | MS.gene042678:CDS |
| ATTTGATCCATCTGATCAGG+AGG | 0.636045 | 5.2:+45536641 | MS.gene042678:CDS |
| AATTGCTCTGTGGAAGAAGT+GGG | 0.639626 | 5.2:-45536894 | None:intergenic |
| TACTGTCTTTCACTATAAGG+AGG | 0.644386 | 5.2:-45537289 | None:intergenic |
| ATATCATCTAGGAACAGAAG+AGG | 0.646141 | 5.2:+45537114 | MS.gene042678:CDS |
| ATGGAAAAGCAATCCTACCA+AGG | 0.655385 | 5.2:+45535502 | MS.gene042678:CDS |
| CTGTATATGAGTAGTGCAGG+AGG | 0.660155 | 5.2:+45537055 | MS.gene042678:CDS |
| TAAACCAGTAATCTTGAATG+GGG | 0.660588 | 5.2:+45537003 | MS.gene042678:CDS |
| AGGCTTATAATACTGGCACT+CGG | 0.668317 | 5.2:+45536918 | MS.gene042678:CDS |
| TATAAGCCTTAATTGCTCTG+TGG | 0.669172 | 5.2:-45536904 | None:intergenic |
| TGACTTAGTCGAAACTCCGA+AGG | 0.670660 | 5.2:-45538736 | None:intergenic |
| TATAGCATTTGGTTACAACA+AGG | 0.688806 | 5.2:+45538865 | MS.gene042678:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTATTTTTTATTTTT+TGG | + | chr5.2:45534976-45534995 | MS.gene042678:intron | 0.0% |
| !!! | AAATTTTTCAATATTTGTAA+AGG | - | chr5.2:45536099-45536118 | None:intergenic | 10.0% |
| !!! | AATTTTTCAATATTTGTAAA+GGG | - | chr5.2:45536098-45536117 | None:intergenic | 10.0% |
| !! | AACTATCAATATGATATATA+AGG | - | chr5.2:45536543-45536562 | None:intergenic | 15.0% |
| !!! | ACATTTTTGTTTATTAATCA+AGG | + | chr5.2:45538124-45538143 | MS.gene042678:intron | 15.0% |
| !!! | TTTTTCCTGATTATATTTTA+GGG | + | chr5.2:45535596-45535615 | MS.gene042678:intron | 15.0% |
| !! | ACATTTGGATAAAAACTAAA+TGG | + | chr5.2:45535092-45535111 | MS.gene042678:intron | 20.0% |
| !! | ATTAAAATCTAAATACTCAG+TGG | - | chr5.2:45537589-45537608 | None:intergenic | 20.0% |
| !! | CATTTGGATAAAAACTAAAT+GGG | + | chr5.2:45535093-45535112 | MS.gene042678:intron | 20.0% |
| !! | TTTGTGTTTATATAGGAATT+TGG | + | chr5.2:45538827-45538846 | MS.gene042678:intron | 20.0% |
| !!! | AACAAGAAAAAATGGTTTTA+AGG | - | chr5.2:45537363-45537382 | None:intergenic | 20.0% |
| !!! | AGGTTTTGTTTTTTTTTTGA+AGG | + | chr5.2:45537674-45537693 | MS.gene042678:intron | 20.0% |
| !!! | ATGTGTTTTCTATGTTTAAA+TGG | + | chr5.2:45535145-45535164 | MS.gene042678:intron | 20.0% |
| !!! | ATTTGATAATGAAACATAGT+AGG | - | chr5.2:45534757-45534776 | None:intergenic | 20.0% |
| !!! | CTTTTTCCTGATTATATTTT+AGG | + | chr5.2:45535595-45535614 | MS.gene042678:intron | 20.0% |
| !!! | TCATTTAAGATAGGTTTTTA+TGG | + | chr5.2:45537625-45537644 | MS.gene042678:intron | 20.0% |
| !!! | TCTTTGATAACAAGAAAAAA+TGG | - | chr5.2:45537371-45537390 | None:intergenic | 20.0% |
| !!! | TTACTTAACTGTAATTTTGA+CGG | + | chr5.2:45536390-45536409 | MS.gene042678:intron | 20.0% |
| !!! | TTGTTTTAACTTCATGAATT+TGG | + | chr5.2:45535069-45535088 | MS.gene042678:intron | 20.0% |
| !!! | TTTTTTTTCTTTCTGTTGTA+AGG | + | chr5.2:45536581-45536600 | MS.gene042678:intron | 20.0% |
| ! | AAAAGCTGAGAAAACTAATT+GGG | + | chr5.2:45537081-45537100 | MS.gene042678:CDS | 25.0% |
| ! | AAAAGGCTGTAAAAAGATTA+TGG | + | chr5.2:45537030-45537049 | MS.gene042678:CDS | 25.0% |
| ! | AAAGCATATCTCCTATAAAT+AGG | + | chr5.2:45535725-45535744 | MS.gene042678:intron | 25.0% |
| ! | AATCCATTGTAAGTTAGTTA+AGG | + | chr5.2:45535673-45535692 | MS.gene042678:intron | 25.0% |
| ! | AATGAAAATAATGCTGATGA+TGG | + | chr5.2:45538409-45538428 | MS.gene042678:CDS | 25.0% |
| ! | AATTAGATGGAATAATACTG+CGG | - | chr5.2:45536025-45536044 | None:intergenic | 25.0% |
| ! | AATTCTGTTGGAAAAAGATA+GGG | + | chr5.2:45535884-45535903 | MS.gene042678:intron | 25.0% |
| ! | ATAAAAACTCATTGAGAACA+TGG | - | chr5.2:45538772-45538791 | None:intergenic | 25.0% |
| ! | ATAAACAAAAATGTGCAGAA+TGG | - | chr5.2:45538118-45538137 | None:intergenic | 25.0% |
| ! | ATAATACTGCGGTATATTAA+TGG | - | chr5.2:45536014-45536033 | None:intergenic | 25.0% |
| ! | ATAGAACACAAAAATAGATC+AGG | - | chr5.2:45538270-45538289 | None:intergenic | 25.0% |
| ! | ATATCTCCTATAAATAGGAA+TGG | + | chr5.2:45535730-45535749 | MS.gene042678:intron | 25.0% |
| ! | ATCCATTGTAAGTTAGTTAA+GGG | + | chr5.2:45535674-45535693 | MS.gene042678:intron | 25.0% |
| ! | ATCTAATCCATTAATTCTGT+TGG | + | chr5.2:45535872-45535891 | MS.gene042678:intron | 25.0% |
| ! | ATCTATCAAGTACTAAACTA+TGG | - | chr5.2:45535653-45535672 | None:intergenic | 25.0% |
| ! | ATGTACCCTAAAATATAATC+AGG | - | chr5.2:45535604-45535623 | None:intergenic | 25.0% |
| ! | ATTGAAAATAATCCTGATGA+TGG | + | chr5.2:45538460-45538479 | MS.gene042678:CDS | 25.0% |
| ! | CTATCTTAAATGATGTCTAA+AGG | - | chr5.2:45537618-45537637 | None:intergenic | 25.0% |
| ! | GAAAAACAAAATTGCAAAAG+AGG | - | chr5.2:45535986-45536005 | None:intergenic | 25.0% |
| ! | TAAAAACTCATTGAGAACAT+GGG | - | chr5.2:45538771-45538790 | None:intergenic | 25.0% |
| ! | TAAATCCCATTCCTATTTAT+AGG | - | chr5.2:45535739-45535758 | None:intergenic | 25.0% |
| ! | TAATTCTGTTGGAAAAAGAT+AGG | + | chr5.2:45535883-45535902 | MS.gene042678:intron | 25.0% |
| ! | TAGAAACTGAACATAATGAA+GGG | + | chr5.2:45538377-45538396 | MS.gene042678:CDS | 25.0% |
| ! | TATCTCCTATAAATAGGAAT+GGG | + | chr5.2:45535731-45535750 | MS.gene042678:intron | 25.0% |
| ! | TGCATTATTAAAGCCATTAA+GGG | - | chr5.2:45538083-45538102 | None:intergenic | 25.0% |
| ! | TTAGGCATTTAATCAATATC+AGG | - | chr5.2:45535209-45535228 | None:intergenic | 25.0% |
| ! | TTATAGTGAAAGACAGTATT+CGG | + | chr5.2:45537294-45537313 | MS.gene042678:CDS | 25.0% |
| ! | TTGCATTATTAAAGCCATTA+AGG | - | chr5.2:45538084-45538103 | None:intergenic | 25.0% |
| !! | AAAATACATGATCAGGATTT+TGG | + | chr5.2:45536950-45536969 | MS.gene042678:CDS | 25.0% |
| !! | AAATGCCTAAATCTGAAATA+TGG | + | chr5.2:45535219-45535238 | MS.gene042678:intron | 25.0% |
| !! | AACCAAAATAAAAAGTGCAT+CGG | + | chr5.2:45535454-45535473 | MS.gene042678:CDS | 25.0% |
| !! | AATCCTGATCATGTATTTTT+CGG | - | chr5.2:45536949-45536968 | None:intergenic | 25.0% |
| !! | ACGCATTTTTGTGTTTATAT+AGG | + | chr5.2:45538820-45538839 | MS.gene042678:intron | 25.0% |
| !! | CTTTAGACATCATTTAAGAT+AGG | + | chr5.2:45537616-45537635 | MS.gene042678:intron | 25.0% |
| !! | TCTGATTTGATTTATGAGAT+GGG | + | chr5.2:45534815-45534834 | MS.gene042678:intron | 25.0% |
| !! | TCTTTTTCCAACAGAATTAA+TGG | - | chr5.2:45535882-45535901 | None:intergenic | 25.0% |
| !! | TTCTGATTTGATTTATGAGA+TGG | + | chr5.2:45534814-45534833 | MS.gene042678:intron | 25.0% |
| !!! | CTAATTTTGGATTTGCTATA+AGG | + | chr5.2:45538175-45538194 | MS.gene042678:intron | 25.0% |
| !!! | TAGAAATATGGCTTTAATAG+TGG | + | chr5.2:45537988-45538007 | MS.gene042678:intron | 25.0% |
| !!! | TAGGAGGGAAATTTTTTTTT+TGG | - | chr5.2:45537818-45537837 | None:intergenic | 25.0% |
| !!! | TATTAAAGCCATATTTCTAG+AGG | - | chr5.2:45537987-45538006 | None:intergenic | 25.0% |
| !!! | TATTTTAGGGTACATTGTTA+TGG | + | chr5.2:45535609-45535628 | MS.gene042678:intron | 25.0% |
| !!! | TTTTTTCCTAAGACATTTGT+AGG | - | chr5.2:45536440-45536459 | None:intergenic | 25.0% |
| !!! | TTTTTTTGAAGGATGAGAAA+AGG | + | chr5.2:45537685-45537704 | MS.gene042678:intron | 25.0% |
| AAATGGTCTATCATTAGACT+TGG | + | chr5.2:45536228-45536247 | MS.gene042678:intron | 30.0% | |
| AACAATAACAAAAGTGGATC+CGG | + | chr5.2:45537240-45537259 | MS.gene042678:CDS | 30.0% | |
| AACACACAAAACAACTTGTA+AGG | - | chr5.2:45538037-45538056 | None:intergenic | 30.0% | |
| AATCTAAATACTCAGTGGTT+TGG | - | chr5.2:45537584-45537603 | None:intergenic | 30.0% | |
| ACTAAACCAGTAATCTTGAA+TGG | + | chr5.2:45537001-45537020 | MS.gene042678:CDS | 30.0% | |
| ACTAAGTGTAACTAATTCCT+TGG | + | chr5.2:45535023-45535042 | MS.gene042678:intron | 30.0% | |
| ACTTCATGAATTTGGACATT+TGG | + | chr5.2:45535077-45535096 | MS.gene042678:intron | 30.0% | |
| AGGAACTAAAATATACAGCA+AGG | - | chr5.2:45536420-45536439 | None:intergenic | 30.0% | |
| AGGAATGGGATTTATATTGA+GGG | + | chr5.2:45535745-45535764 | MS.gene042678:intron | 30.0% | |
| AGTTAGTTAAGGGGTTATAT+AGG | + | chr5.2:45535684-45535703 | MS.gene042678:intron | 30.0% | |
| ATGATAAACTCATCAACGAA+AGG | - | chr5.2:45536717-45536736 | None:intergenic | 30.0% | |
| ATTACTCTTGAAGTGAATGA+TGG | + | chr5.2:45536735-45536754 | MS.gene042678:CDS | 30.0% | |
| ATTATGTTCAGTTTCTACCA+TGG | - | chr5.2:45538374-45538393 | None:intergenic | 30.0% | |
| CAAGTCCATATTTCAGATTT+AGG | - | chr5.2:45535227-45535246 | None:intergenic | 30.0% | |
| CAATAGTATGCTGACAATTT+GGG | - | chr5.2:45535532-45535551 | None:intergenic | 30.0% | |
| CTAAACCAGTAATCTTGAAT+GGG | + | chr5.2:45537002-45537021 | MS.gene042678:CDS | 30.0% | |
| GAAAAGCTGAGAAAACTAAT+TGG | + | chr5.2:45537080-45537099 | MS.gene042678:CDS | 30.0% | |
| GAATACTGTCTTTCACTATA+AGG | - | chr5.2:45537295-45537314 | None:intergenic | 30.0% | |
| GCAATTAAGGCTTATAATAC+TGG | + | chr5.2:45536911-45536930 | MS.gene042678:CDS | 30.0% | |
| GCAATTGATGAGATTAGAAT+CGG | + | chr5.2:45535771-45535790 | MS.gene042678:intron | 30.0% | |
| GGGTTCAAACAAAAATTAGA+TGG | - | chr5.2:45536038-45536057 | None:intergenic | 30.0% | |
| GTAGAAACTGAACATAATGA+AGG | + | chr5.2:45538376-45538395 | MS.gene042678:CDS | 30.0% | |
| GTTATGCATCAATATCATCT+AGG | + | chr5.2:45537103-45537122 | MS.gene042678:CDS | 30.0% | |
| TAAACCAGTAATCTTGAATG+GGG | + | chr5.2:45537003-45537022 | MS.gene042678:CDS | 30.0% | |
| TAAGCTTCAATGAAAATGTC+AGG | + | chr5.2:45536848-45536867 | MS.gene042678:intron | 30.0% | |
| TAGGAATGGGATTTATATTG+AGG | + | chr5.2:45535744-45535763 | MS.gene042678:intron | 30.0% | |
| TAGTGAATCACAAAATCTGT+TGG | + | chr5.2:45538498-45538517 | MS.gene042678:CDS | 30.0% | |
| TATAGCATTTGGTTACAACA+AGG | + | chr5.2:45538865-45538884 | MS.gene042678:CDS | 30.0% | |
| TATTAAGTAAGAGATTCCTC+TGG | - | chr5.2:45535315-45535334 | None:intergenic | 30.0% | |
| TCAATAGTATGCTGACAATT+TGG | - | chr5.2:45535533-45535552 | None:intergenic | 30.0% | |
| TCCATTGTAAGTTAGTTAAG+GGG | + | chr5.2:45535675-45535694 | MS.gene042678:intron | 30.0% | |
| TGAAGCAACAATAACAAAAG+TGG | + | chr5.2:45537234-45537253 | MS.gene042678:CDS | 30.0% | |
| TTAGTTCCTACAAATGTCTT+AGG | + | chr5.2:45536431-45536450 | MS.gene042678:intron | 30.0% | |
| TTATGAGATCGTTTGAGAAA+AGG | + | chr5.2:45536265-45536284 | MS.gene042678:intron | 30.0% | |
| ! | ACCAAAATAAAAAGTGCATC+GGG | + | chr5.2:45535455-45535474 | MS.gene042678:CDS | 30.0% |
| ! | ACCATGTCAATTTTAAACCA+AGG | - | chr5.2:45535043-45535062 | None:intergenic | 30.0% |
| ! | ATTTGATTTATGAGATGGGT+TGG | + | chr5.2:45534819-45534838 | MS.gene042678:intron | 30.0% |
| ! | GATAATGCTCTTAGATTTTG+TGG | + | chr5.2:45535246-45535265 | MS.gene042678:intron | 30.0% |
| ! | TCCTTGGTTTAAAATTGACA+TGG | + | chr5.2:45535039-45535058 | MS.gene042678:intron | 30.0% |
| ! | TGGTTTAAAATTGACATGGT+TGG | + | chr5.2:45535043-45535062 | MS.gene042678:intron | 30.0% |
| ! | TTTCACATCCTCTAGAAATA+TGG | + | chr5.2:45537976-45537995 | MS.gene042678:intron | 30.0% |
| !! | CAAGATAGCTTTATAGCATT+TGG | + | chr5.2:45538854-45538873 | MS.gene042678:CDS | 30.0% |
| !! | GTTTGTGTTTTTGTTCAAGT+TGG | + | chr5.2:45534878-45534897 | MS.gene042678:intron | 30.0% |
| !! | GTTTTTAAGCGTGTATTAGA+TGG | + | chr5.2:45536178-45536197 | MS.gene042678:intron | 30.0% |
| !! | TTAGATTATGTGTGTTGACT+AGG | + | chr5.2:45535348-45535367 | MS.gene042678:intron | 30.0% |
| !! | TTGTTTTGTGTGTTTGAGTT+AGG | + | chr5.2:45538043-45538062 | MS.gene042678:intron | 30.0% |
| !!! | AAATGGTTTTAAGGTTTACC+TGG | - | chr5.2:45537354-45537373 | None:intergenic | 30.0% |
| !!! | AATGGTTTTAAGGTTTACCT+GGG | - | chr5.2:45537353-45537372 | None:intergenic | 30.0% |
| !!! | GAGGGAAATTTTTTTTTTGG+TGG | - | chr5.2:45537815-45537834 | None:intergenic | 30.0% |
| !!! | GGAAATTTTTTTTTTGGTGG+TGG | - | chr5.2:45537812-45537831 | None:intergenic | 30.0% |
| !!! | TTGGTCAGTTTAGGTTTTTT+TGG | + | chr5.2:45534897-45534916 | MS.gene042678:intron | 30.0% |
| AATATTTGTAAAGGGCCACA+TGG | - | chr5.2:45536090-45536109 | None:intergenic | 35.0% | |
| AATCTGTTGTTACATCGGAT+GGG | + | chr5.2:45536325-45536344 | MS.gene042678:intron | 35.0% | |
| ACATTTGACTCTGCATTTGA+AGG | - | chr5.2:45538703-45538722 | None:intergenic | 35.0% | |
| ACCCCTTAACTAACTTACAA+TGG | - | chr5.2:45535679-45535698 | None:intergenic | 35.0% | |
| AGATTGCAGGTTAAATAGGT+GGG | - | chr5.2:45536310-45536329 | None:intergenic | 35.0% | |
| AGCAAAAGATGATCTATCCA+TGG | + | chr5.2:45538354-45538373 | MS.gene042678:CDS | 35.0% | |
| AGGGTACATTGTTATGGAAT+GGG | + | chr5.2:45535615-45535634 | MS.gene042678:intron | 35.0% | |
| AGTTCATGGCAAGTCATAAT+AGG | - | chr5.2:45537407-45537426 | None:intergenic | 35.0% | |
| ATAAACATCGTGTCGTAAAC+CGG | - | chr5.2:45535176-45535195 | None:intergenic | 35.0% | |
| ATAGACCATTTGAATCCAGA+TGG | - | chr5.2:45536219-45536238 | None:intergenic | 35.0% | |
| ATATCATCTAGGAACAGAAG+AGG | + | chr5.2:45537114-45537133 | MS.gene042678:CDS | 35.0% | |
| ATCTTGAATGGGGTTCAAAA+AGG | + | chr5.2:45537013-45537032 | MS.gene042678:CDS | 35.0% | |
| ATGGGATTTATATTGAGGGT+AGG | + | chr5.2:45535749-45535768 | MS.gene042678:intron | 35.0% | |
| CAAAACAACTTGTAAGGTAC+AGG | - | chr5.2:45538031-45538050 | None:intergenic | 35.0% | |
| CAAATTTGATCCATCTGATC+AGG | + | chr5.2:45536638-45536657 | MS.gene042678:CDS | 35.0% | |
| CAACAGATTGCAGGTTAAAT+AGG | - | chr5.2:45536314-45536333 | None:intergenic | 35.0% | |
| CTAGCTGAGCATAAATAGAA+AGG | - | chr5.2:45538627-45538646 | None:intergenic | 35.0% | |
| CTTAGTTTCAATCCACCTAT+AGG | + | chr5.2:45537867-45537886 | MS.gene042678:intron | 35.0% | |
| CTTTCTATTTATGCTCAGCT+AGG | + | chr5.2:45538625-45538644 | MS.gene042678:CDS | 35.0% | |
| GATAATGAGTACTCAGTAGT+AGG | + | chr5.2:45537471-45537490 | MS.gene042678:intron | 35.0% | |
| GATCTCATAATGTCCTATGA+TGG | - | chr5.2:45536255-45536274 | None:intergenic | 35.0% | |
| GATTAGAATCGGAAAAGTCT+TGG | + | chr5.2:45535782-45535801 | MS.gene042678:intron | 35.0% | |
| GTGATCTGGAAAATGTTACA+TGG | + | chr5.2:45535483-45535502 | MS.gene042678:CDS | 35.0% | |
| GTTGTAAGGTTGTAAAAGAG+TGG | + | chr5.2:45536595-45536614 | MS.gene042678:intron | 35.0% | |
| TAAGGGGTTATATAGGTAGT+TGG | + | chr5.2:45535691-45535710 | MS.gene042678:intron | 35.0% | |
| TACTGTCTTTCACTATAAGG+AGG | - | chr5.2:45537292-45537311 | None:intergenic | 35.0% | |
| TAGGGTACATTGTTATGGAA+TGG | + | chr5.2:45535614-45535633 | MS.gene042678:intron | 35.0% | |
| TATAAGCCTTAATTGCTCTG+TGG | - | chr5.2:45536907-45536926 | None:intergenic | 35.0% | |
| TCAAACCATCTGGATTCAAA+TGG | + | chr5.2:45536211-45536230 | MS.gene042678:intron | 35.0% | |
| TCATCTTTACCATCTCTAGT+AGG | - | chr5.2:45538583-45538602 | None:intergenic | 35.0% | |
| TCTTGGTCTCTTGATATCTA+GGG | + | chr5.2:45535799-45535818 | MS.gene042678:intron | 35.0% | |
| TGAGCATAAATAGAAAGGCT+GGG | - | chr5.2:45538622-45538641 | None:intergenic | 35.0% | |
| TGCATAATCTATGCAATGTC+CGG | + | chr5.2:45537772-45537791 | MS.gene042678:intron | 35.0% | |
| TTTAAGCGTGTATTAGATGG+AGG | + | chr5.2:45536181-45536200 | MS.gene042678:intron | 35.0% | |
| TTTCTATATGCAGACCATCT+TGG | + | chr5.2:45535408-45535427 | MS.gene042678:intron | 35.0% | |
| ! | AAATTAGAAGTGTAGCCAAG+TGG | - | chr5.2:45538162-45538181 | None:intergenic | 35.0% |
| ! | ACAAAACCTTTTCTCACTAG+TGG | - | chr5.2:45537663-45537682 | None:intergenic | 35.0% |
| ! | ATTCACTATCCCACCATTTT+TGG | - | chr5.2:45538486-45538505 | None:intergenic | 35.0% |
| ! | ATTGTTGCTTCAATAGCTTC+AGG | - | chr5.2:45537226-45537245 | None:intergenic | 35.0% |
| ! | CAAAACCTTTTCTCACTAGT+GGG | - | chr5.2:45537662-45537681 | None:intergenic | 35.0% |
| ! | CTTGGCTACACTTCTAATTT+TGG | + | chr5.2:45538162-45538181 | MS.gene042678:intron | 35.0% |
| ! | GGATCAAATTTGACACCTTT+TGG | - | chr5.2:45536630-45536649 | None:intergenic | 35.0% |
| ! | TTGTAAGGTACAGGCTTTTA+AGG | - | chr5.2:45538022-45538041 | None:intergenic | 35.0% |
| !! | ATCGAGAAGTATTGTTTGTG+GGG | + | chr5.2:45535910-45535929 | MS.gene042678:intron | 35.0% |
| !! | CATCGAGAAGTATTGTTTGT+GGG | + | chr5.2:45535909-45535928 | MS.gene042678:intron | 35.0% |
| !! | CTATAGGTGGATTGAAACTA+AGG | - | chr5.2:45537869-45537888 | None:intergenic | 35.0% |
| !! | TCATCGAGAAGTATTGTTTG+TGG | + | chr5.2:45535908-45535927 | MS.gene042678:intron | 35.0% |
| !! | TCCCGATGCACTTTTTATTT+TGG | - | chr5.2:45535459-45535478 | None:intergenic | 35.0% |
| !! | TGGCTTTAATAGTGGAGATA+AGG | + | chr5.2:45537996-45538015 | MS.gene042678:intron | 35.0% |
| !! | TTGACATTTAGCTTGTGAGT+TGG | - | chr5.2:45536360-45536379 | None:intergenic | 35.0% |
| !! | TTGTTCAAGTTGGTCAGTTT+AGG | + | chr5.2:45534888-45534907 | MS.gene042678:intron | 35.0% |
| !!! | ATGGTTTTAAGGTTTACCTG+GGG | - | chr5.2:45537352-45537371 | None:intergenic | 35.0% |
| !!! | ATTTTTTTTTTGGTGGTGGC+CGG | - | chr5.2:45537808-45537827 | None:intergenic | 35.0% |
| AACCCATCAGTTACTTGGTA+GGG | + | chr5.2:45536053-45536072 | MS.gene042678:intron | 40.0% | |
| AACTCATCAACGAAAGGATG+AGG | - | chr5.2:45536711-45536730 | None:intergenic | 40.0% | |
| AATTGCTCTGTGGAAGAAGT+GGG | - | chr5.2:45536897-45536916 | None:intergenic | 40.0% | |
| ACACTACACACTAGAGTTCA+TGG | - | chr5.2:45537421-45537440 | None:intergenic | 40.0% | |
| ACAGAAGAGGATGAAAAGGA+TGG | + | chr5.2:45537127-45537146 | MS.gene042678:CDS | 40.0% | |
| ACTTCAACAGTCTCCCTTAA+TGG | + | chr5.2:45538067-45538086 | MS.gene042678:intron | 40.0% | |
| AGGAACAGAAGAGGATGAAA+AGG | + | chr5.2:45537123-45537142 | MS.gene042678:CDS | 40.0% | |
| AGGATAGATGTCAAACCATC+TGG | + | chr5.2:45536201-45536220 | MS.gene042678:intron | 40.0% | |
| AGGCTTATAATACTGGCACT+CGG | + | chr5.2:45536918-45536937 | MS.gene042678:CDS | 40.0% | |
| ATATCCTTCTTCAGATGCTC+TGG | - | chr5.2:45538652-45538671 | None:intergenic | 40.0% | |
| ATCTGTTGTTACATCGGATG+GGG | + | chr5.2:45536326-45536345 | MS.gene042678:intron | 40.0% | |
| ATGGAAAAGCAATCCTACCA+AGG | + | chr5.2:45535502-45535521 | MS.gene042678:CDS | 40.0% | |
| ATGTCAGGTGTTAAGCAAGA+TGG | + | chr5.2:45536863-45536882 | MS.gene042678:intron | 40.0% | |
| ATTTGATCCATCTGATCAGG+AGG | + | chr5.2:45536641-45536660 | MS.gene042678:CDS | 40.0% | |
| CAAATTACCTCCTGATCAGA+TGG | - | chr5.2:45536651-45536670 | None:intergenic | 40.0% | |
| CAATCTGTTGTTACATCGGA+TGG | + | chr5.2:45536324-45536343 | MS.gene042678:intron | 40.0% | |
| CAGATTGCAGGTTAAATAGG+TGG | - | chr5.2:45536311-45536330 | None:intergenic | 40.0% | |
| CAGTATTCGGATGTAGATCT+AGG | + | chr5.2:45537307-45537326 | MS.gene042678:CDS | 40.0% | |
| CATAAATAGAAAGGCTGGGT+TGG | - | chr5.2:45538618-45538637 | None:intergenic | 40.0% | |
| CATAATCTATGCAATGTCCG+GGG | + | chr5.2:45537774-45537793 | MS.gene042678:intron | 40.0% | |
| CATCTATGTAGTAAGACCAG+AGG | + | chr5.2:45535296-45535315 | MS.gene042678:intron | 40.0% | |
| CATCTGATCAGGAGGTAATT+TGG | + | chr5.2:45536649-45536668 | MS.gene042678:CDS | 40.0% | |
| CCTGCAATCTGTTGTTACAT+CGG | + | chr5.2:45536320-45536339 | MS.gene042678:intron | 40.0% | |
| CTATGTTTAAATGGCGTTGC+CGG | + | chr5.2:45535154-45535173 | MS.gene042678:intron | 40.0% | |
| CTGAGCATAAATAGAAAGGC+TGG | - | chr5.2:45538623-45538642 | None:intergenic | 40.0% | |
| CTGTAGTATCTTTCTTCTGC+TGG | + | chr5.2:45537928-45537947 | MS.gene042678:intron | 40.0% | |
| CTTCTTCCACAGAGCAATTA+AGG | + | chr5.2:45536898-45536917 | MS.gene042678:CDS | 40.0% | |
| GATTGCAGGTTAAATAGGTG+GGG | - | chr5.2:45536309-45536328 | None:intergenic | 40.0% | |
| GCATAATCTATGCAATGTCC+GGG | + | chr5.2:45537773-45537792 | MS.gene042678:intron | 40.0% | |
| GGAGTTTCGACTAAGTCAAT+TGG | + | chr5.2:45538741-45538760 | MS.gene042678:CDS | 40.0% | |
| GGGTACATTGTTATGGAATG+GGG | + | chr5.2:45535616-45535635 | MS.gene042678:intron | 40.0% | |
| GTCTTGGTCTCTTGATATCT+AGG | + | chr5.2:45535798-45535817 | MS.gene042678:intron | 40.0% | |
| GTTCTGTATATGAGTAGTGC+AGG | + | chr5.2:45537052-45537071 | MS.gene042678:CDS | 40.0% | |
| GTTTGAACCCATCAGTTACT+TGG | + | chr5.2:45536048-45536067 | MS.gene042678:intron | 40.0% | |
| TAATTGCTCTGTGGAAGAAG+TGG | - | chr5.2:45536898-45536917 | None:intergenic | 40.0% | |
| TCATCCAGACAATTCATCTG+AGG | - | chr5.2:45538310-45538329 | None:intergenic | 40.0% | |
| TCTGTTGGATTCACAACAAC+TGG | + | chr5.2:45538513-45538532 | MS.gene042678:CDS | 40.0% | |
| TGAACCCCATTCAAGATTAC+TGG | - | chr5.2:45537010-45537029 | None:intergenic | 40.0% | |
| TGAGCTTAGCTCAGTTTGTA+GGG | + | chr5.2:45537745-45537764 | MS.gene042678:intron | 40.0% | |
| TTAAGCCCACTAGTGAGAAA+AGG | + | chr5.2:45537654-45537673 | MS.gene042678:intron | 40.0% | |
| TTGCTTGCAAAATGTGGTGT+TGG | + | chr5.2:45536675-45536694 | MS.gene042678:CDS | 40.0% | |
| TTTGCTTGCTCTTCACAATG+AGG | - | chr5.2:45538340-45538359 | None:intergenic | 40.0% | |
| ! | CATTAGACTTGGTCCATCAT+AGG | + | chr5.2:45536239-45536258 | MS.gene042678:intron | 40.0% |
| ! | CTGTTCCTTCACACCATTTT+TGG | - | chr5.2:45538435-45538454 | None:intergenic | 40.0% |
| ! | TTTAAGGTTTACCTGGGGAA+TGG | - | chr5.2:45537347-45537366 | None:intergenic | 40.0% |
| !! | ATCCTGATGATGGCCAAAAA+TGG | + | chr5.2:45538470-45538489 | MS.gene042678:CDS | 40.0% |
| !! | ATGCTGATGATGGCCAAAAA+TGG | + | chr5.2:45538419-45538438 | MS.gene042678:CDS | 40.0% |
| !! | TCGAGAAGTATTGTTTGTGG+GGG | + | chr5.2:45535911-45535930 | MS.gene042678:intron | 40.0% |
| !! | TGATGATGGCCAAAAATGGT+GGG | + | chr5.2:45538423-45538442 | MS.gene042678:CDS | 40.0% |
| !!! | TTTTTTTTTTGGTGGTGGCC+GGG | - | chr5.2:45537807-45537826 | None:intergenic | 40.0% |
| AAGGTTGTAAAAGAGTGGCC+TGG | + | chr5.2:45536600-45536619 | MS.gene042678:intron | 45.0% | |
| ACAGTACGTACATGCTAGGA+GGG | - | chr5.2:45537833-45537852 | None:intergenic | 45.0% | |
| ACCCATCAGTTACTTGGTAG+GGG | + | chr5.2:45536054-45536073 | MS.gene042678:intron | 45.0% | |
| ACTCATCCTCAAAACTTGCC+AGG | + | chr5.2:45536768-45536787 | MS.gene042678:CDS | 45.0% | |
| ACTCTGCATTTGAAGGCTCA+AGG | - | chr5.2:45538696-45538715 | None:intergenic | 45.0% | |
| ATCCCCTACCAAGTAACTGA+TGG | - | chr5.2:45536059-45536078 | None:intergenic | 45.0% | |
| ATCCTCAAAACTTGCCAGGT+TGG | + | chr5.2:45536772-45536791 | MS.gene042678:intron | 45.0% | |
| ATGCCGCAATTAAGGCCTAT+AGG | - | chr5.2:45537885-45537904 | None:intergenic | 45.0% | |
| CAACACAGTACGTACATGCT+AGG | - | chr5.2:45537837-45537856 | None:intergenic | 45.0% | |
| CAACAGCAGCAAGTCAAACT+GGG | + | chr5.2:45537178-45537197 | MS.gene042678:CDS | 45.0% | |
| CAATTCATCTGAGGAGGCTT+CGG | - | chr5.2:45538301-45538320 | None:intergenic | 45.0% | |
| CCACCTATAGGCCTTAATTG+CGG | + | chr5.2:45537879-45537898 | MS.gene042678:intron | 45.0% | |
| CCGATGTAACAACAGATTGC+AGG | - | chr5.2:45536323-45536342 | None:intergenic | 45.0% | |
| CTAGCATGTACGTACTGTGT+TGG | + | chr5.2:45537835-45537854 | MS.gene042678:intron | 45.0% | |
| CTGTATATGAGTAGTGCAGG+AGG | + | chr5.2:45537055-45537074 | MS.gene042678:CDS | 45.0% | |
| CTTTCACTATAAGGAGGCTC+AGG | - | chr5.2:45537286-45537305 | None:intergenic | 45.0% | |
| GAACCCATCAGTTACTTGGT+AGG | + | chr5.2:45536052-45536071 | MS.gene042678:intron | 45.0% | |
| GATGGCCAAAAATGGTGTGA+AGG | + | chr5.2:45538427-45538446 | MS.gene042678:CDS | 45.0% | |
| GCAAGTCAAACTGGGTGATA+AGG | + | chr5.2:45537186-45537205 | MS.gene042678:CDS | 45.0% | |
| GCGCCGAAAAATACATGATC+AGG | + | chr5.2:45536943-45536962 | MS.gene042678:CDS | 45.0% | |
| GCTCAAAGATGCCGCAATTA+AGG | - | chr5.2:45537893-45537912 | None:intergenic | 45.0% | |
| GTCACAGATTTGGGAGTAAC+CGG | - | chr5.2:45537262-45537281 | None:intergenic | 45.0% | |
| GTGAGCTTAGCTCAGTTTGT+AGG | + | chr5.2:45537744-45537763 | MS.gene042678:intron | 45.0% | |
| TAAAACGCAAGTCACCAACC+TGG | - | chr5.2:45536789-45536808 | None:intergenic | 45.0% | |
| TACCATCTCTAGTAGGAGAC+TGG | - | chr5.2:45538576-45538595 | None:intergenic | 45.0% | |
| TATATGAGTAGTGCAGGAGG+AGG | + | chr5.2:45537058-45537077 | MS.gene042678:CDS | 45.0% | |
| TATATGCAGACCATCTTGGC+TGG | + | chr5.2:45535412-45535431 | MS.gene042678:intron | 45.0% | |
| TCCAGACAATTCATCTGAGG+AGG | - | chr5.2:45538307-45538326 | None:intergenic | 45.0% | |
| TCCCCTACCAAGTAACTGAT+GGG | - | chr5.2:45536058-45536077 | None:intergenic | 45.0% | |
| TGACTTAGTCGAAACTCCGA+AGG | - | chr5.2:45538739-45538758 | None:intergenic | 45.0% | |
| TGGCACTTGCTTGCAAAATG+TGG | + | chr5.2:45536669-45536688 | MS.gene042678:CDS | 45.0% | |
| TTGTTACATCGGATGGGGTT+TGG | + | chr5.2:45536331-45536350 | MS.gene042678:intron | 45.0% | |
| ! | AGGAGTGTAACATAGCCACT+TGG | + | chr5.2:45538144-45538163 | MS.gene042678:intron | 45.0% |
| ! | TTGACACCTTTTGGCAAACC+AGG | - | chr5.2:45536621-45536640 | None:intergenic | 45.0% |
| !! | CGAGAAGTATTGTTTGTGGG+GGG | + | chr5.2:45535912-45535931 | MS.gene042678:intron | 45.0% |
| !! | CTGATGATGGCCAAAAATGG+TGG | + | chr5.2:45538422-45538441 | MS.gene042678:CDS | 45.0% |
| !! | TTCTTCCAGTTTTGTGCCAG+CGG | - | chr5.2:45536982-45537001 | None:intergenic | 45.0% |
| !!! | CACCATTTTTGGCCATCATC+AGG | - | chr5.2:45538424-45538443 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTGGTGGTGGCCG+GGG | - | chr5.2:45537806-45537825 | None:intergenic | 45.0% |
| AGCCAGTCTCCTACTAGAGA+TGG | + | chr5.2:45538571-45538590 | MS.gene042678:CDS | 50.0% | |
| AGGCTCAGGAGTCACAGATT+TGG | - | chr5.2:45537272-45537291 | None:intergenic | 50.0% | |
| ATTGTTTGTGGGGGGCCATT+TGG | + | chr5.2:45535920-45535939 | MS.gene042678:intron | 50.0% | |
| CAAACTGAGCTAAGCTCACG+AGG | - | chr5.2:45537743-45537762 | None:intergenic | 50.0% | |
| CAATTTGGGCAAGCCTTGGT+AGG | - | chr5.2:45535518-45535537 | None:intergenic | 50.0% | |
| CACAGTACGTACATGCTAGG+AGG | - | chr5.2:45537834-45537853 | None:intergenic | 50.0% | |
| CCAACAGCAGCAAGTCAAAC+TGG | + | chr5.2:45537177-45537196 | MS.gene042678:CDS | 50.0% | |
| CCGCAATTAAGGCCTATAGG+TGG | - | chr5.2:45537882-45537901 | None:intergenic | 50.0% | |
| CTCTACCAGACCAAGCCAAA+TGG | - | chr5.2:45535938-45535957 | None:intergenic | 50.0% | |
| CTGACAATTTGGGCAAGCCT+TGG | - | chr5.2:45535522-45535541 | None:intergenic | 50.0% | |
| GCCTCCTCAGATGAATTGTC+TGG | + | chr5.2:45538303-45538322 | MS.gene042678:intron | 50.0% | |
| GGCTCAGGAGTCACAGATTT+GGG | - | chr5.2:45537271-45537290 | None:intergenic | 50.0% | |
| ! | AGGACCAGAGCATCTGAAGA+AGG | + | chr5.2:45538645-45538664 | MS.gene042678:CDS | 50.0% |
| ! | AGGGGATTTTGAGCACCATG+TGG | + | chr5.2:45536072-45536091 | MS.gene042678:intron | 50.0% |
| ! | CACCAACCTGGCAAGTTTTG+AGG | - | chr5.2:45536777-45536796 | None:intergenic | 50.0% |
| ! | CTTTTGTCCACCAGCCAAGA+TGG | - | chr5.2:45535425-45535444 | None:intergenic | 50.0% |
| !! | CCAGTTTGACTTGCTGCTGT+TGG | - | chr5.2:45537180-45537199 | None:intergenic | 50.0% |
| AAGCTCACGAGGACGCTATG+AGG | - | chr5.2:45537732-45537751 | None:intergenic | 55.0% | |
| AATGTCCGGGGTTCAAACCC+CGG | + | chr5.2:45537786-45537805 | MS.gene042678:intron | 55.0% | |
| AGCTCACGAGGACGCTATGA+GGG | - | chr5.2:45537731-45537750 | None:intergenic | 55.0% | |
| AGGTTTACCTGGGGAATGGC+AGG | - | chr5.2:45537343-45537362 | None:intergenic | 55.0% | |
| ATGCAGACCATCTTGGCTGG+TGG | + | chr5.2:45535415-45535434 | MS.gene042678:intron | 55.0% | |
| ! | GAGTGGCCTGGTTTGCCAAA+AGG | + | chr5.2:45536612-45536631 | MS.gene042678:CDS | 55.0% |
| ! | TGCATCGGGAGCATGTGATC+TGG | + | chr5.2:45535469-45535488 | MS.gene042678:CDS | 55.0% |
| !!! | AGGATTTTGGTGACGTCCGC+TGG | + | chr5.2:45536963-45536982 | MS.gene042678:CDS | 55.0% |
| AGACACACCTGCCATTCCCC+AGG | + | chr5.2:45537333-45537352 | MS.gene042678:CDS | 60.0% | |
| GACGTCCGCTGGCACAAAAC+TGG | + | chr5.2:45536974-45536993 | MS.gene042678:CDS | 60.0% | |
| TTGTGGGGGGCCATTTGGCT+TGG | + | chr5.2:45535925-45535944 | MS.gene042678:intron | 60.0% | |
| !! | GGGGGCCATTTGGCTTGGTC+TGG | + | chr5.2:45535930-45535949 | MS.gene042678:intron | 65.0% |
| GGTGGCCGGGGTTTGAACCC+CGG | - | chr5.2:45537794-45537813 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 45534729 | 45538898 | 45534729 | ID=MS.gene042678 |
| chr5.2 | mRNA | 45534729 | 45538898 | 45534729 | ID=MS.gene042678.t1;Parent=MS.gene042678 |
| chr5.2 | exon | 45534729 | 45534736 | 45534729 | ID=MS.gene042678.t1.exon1;Parent=MS.gene042678.t1 |
| chr5.2 | CDS | 45534729 | 45534736 | 45534729 | ID=cds.MS.gene042678.t1;Parent=MS.gene042678.t1 |
| chr5.2 | exon | 45535421 | 45535562 | 45535421 | ID=MS.gene042678.t1.exon2;Parent=MS.gene042678.t1 |
| chr5.2 | CDS | 45535421 | 45535562 | 45535421 | ID=cds.MS.gene042678.t1;Parent=MS.gene042678.t1 |
| chr5.2 | exon | 45536603 | 45536789 | 45536603 | ID=MS.gene042678.t1.exon3;Parent=MS.gene042678.t1 |
| chr5.2 | CDS | 45536603 | 45536789 | 45536603 | ID=cds.MS.gene042678.t1;Parent=MS.gene042678.t1 |
| chr5.2 | exon | 45536870 | 45537354 | 45536870 | ID=MS.gene042678.t1.exon4;Parent=MS.gene042678.t1 |
| chr5.2 | CDS | 45536870 | 45537354 | 45536870 | ID=cds.MS.gene042678.t1;Parent=MS.gene042678.t1 |
| chr5.2 | exon | 45538304 | 45538762 | 45538304 | ID=MS.gene042678.t1.exon5;Parent=MS.gene042678.t1 |
| chr5.2 | CDS | 45538304 | 45538762 | 45538304 | ID=cds.MS.gene042678.t1;Parent=MS.gene042678.t1 |
| chr5.2 | exon | 45538842 | 45538898 | 45538842 | ID=MS.gene042678.t1.exon6;Parent=MS.gene042678.t1 |
| chr5.2 | CDS | 45538842 | 45538898 | 45538842 | ID=cds.MS.gene042678.t1;Parent=MS.gene042678.t1 |
| Gene Sequence |
| Protein sequence |
