AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene042887

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene042887.t1 MTR_0349s0030 93.750 208 5 1 1 200 86 293 5.02e-143 400
MS.gene042887.t1 MTR_6g074905 93.137 204 6 1 5 200 970 1173 2.33e-132 399
MS.gene042887.t1 MTR_5g082700 62.621 206 69 1 1 198 507 712 1.41e-92 285
MS.gene042887.t1 MTR_6g074870 89.116 147 8 1 5 143 201 347 2.75e-91 271
MS.gene042887.t1 MTR_6g074640 69.681 188 8 2 13 200 101 239 5.35e-82 243
MS.gene042887.t1 MTR_5g082700 64.384 146 44 1 1 138 507 652 1.51e-62 205
MS.gene042887.t1 MTR_6g074670 86.598 97 13 0 82 178 26 122 9.74e-56 173
MS.gene042887.t1 MTR_6g074750 85.000 100 7 1 4 95 18 117 8.96e-55 170
MS.gene042887.t1 MTR_5g082700 71.717 99 20 1 1 91 507 605 9.75e-45 157
MS.gene042887.t1 MTR_6g074835 93.548 62 4 0 91 152 63 124 1.16e-35 122
MS.gene042887.t1 MTR_3g109390 34.545 220 109 5 10 194 169 388 2.65e-31 117
MS.gene042887.t1 MTR_3g109390 34.545 220 109 5 10 194 191 410 4.88e-31 117
MS.gene042887.t1 MTR_3g109390 34.545 220 109 5 10 194 160 379 5.92e-31 116
MS.gene042887.t1 MTR_3g109390 34.545 220 109 5 10 194 182 401 7.89e-31 116
MS.gene042887.t1 MTR_3g109390 35.000 220 106 6 10 194 182 399 6.36e-30 114
MS.gene042887.t1 MTR_4g104620 33.929 224 112 7 4 191 106 329 1.73e-28 108
MS.gene042887.t1 MTR_4g104620 33.929 224 112 7 4 191 97 320 1.97e-28 108
MS.gene042887.t1 MTR_8g070930 34.921 252 104 10 4 197 243 492 4.52e-28 110
MS.gene042887.t1 MTR_4g104620 33.929 224 112 7 4 191 200 423 6.76e-28 108
MS.gene042887.t1 MTR_6g074480 95.833 48 2 0 153 200 30 77 8.15e-28 100
MS.gene042887.t1 MTR_3g076540 32.589 224 115 6 4 191 97 320 1.20e-27 106
MS.gene042887.t1 MTR_3g076540 32.589 224 115 6 4 191 114 337 1.50e-27 106
MS.gene042887.t1 MTR_3g086530 34.821 224 102 6 10 192 29 249 4.60e-27 103
MS.gene042887.t1 MTR_3g076540 32.589 224 115 6 4 191 196 419 4.89e-27 106
MS.gene042887.t1 MTR_3g086530 34.821 224 102 6 10 192 84 304 1.51e-26 103
MS.gene042887.t1 MTR_1g111180 31.429 210 110 5 10 192 790 992 6.09e-26 104
MS.gene042887.t1 MTR_1g111180 31.429 210 110 5 10 192 789 991 6.15e-26 104
MS.gene042887.t1 MTR_3g086530 33.913 230 108 6 4 192 195 421 1.16e-25 102
MS.gene042887.t1 MTR_8g069620 91.837 49 4 0 91 139 153 201 6.48e-25 96.7
MS.gene042887.t1 MTR_3g086530 37.423 163 69 4 4 133 195 357 1.43e-24 99.4
MS.gene042887.t1 MTR_3g076540 31.466 232 115 7 4 191 196 427 2.38e-24 99.4
MS.gene042887.t1 MTR_3g109390 38.732 142 57 3 10 121 182 323 2.57e-23 95.1
MS.gene042887.t1 MTR_3g460950 30.102 196 109 5 9 192 140 319 6.61e-21 89.0
MS.gene042887.t1 MTR_3g060330 30.102 196 109 5 9 192 140 319 6.61e-21 89.0
MS.gene042887.t1 MTR_8g071230 31.527 203 103 6 4 191 102 283 7.82e-21 89.7
MS.gene042887.t1 MTR_1g086370 31.959 194 104 7 10 191 63 240 8.88e-21 87.8
MS.gene042887.t1 MTR_7g078690 31.795 195 105 6 10 192 147 325 1.20e-20 88.6
MS.gene042887.t1 MTR_8g098845 30.500 200 111 6 5 192 156 339 1.90e-20 88.2
MS.gene042887.t1 MTR_1g086370 31.500 200 109 7 10 197 149 332 2.31e-20 87.8
MS.gene042887.t1 MTR_1g086370 31.500 200 109 7 10 197 182 365 2.45e-20 87.8
MS.gene042887.t1 MTR_1g084760 30.693 202 112 7 8 197 180 365 4.32e-20 87.4
MS.gene042887.t1 MTR_8g086000 29.703 202 113 6 9 197 140 325 6.12e-20 86.7
MS.gene042887.t1 MTR_7g110060 31.606 193 104 7 10 190 182 358 7.40e-20 86.7
MS.gene042887.t1 MTR_8g086000 29.703 202 113 6 9 197 183 368 8.97e-20 86.3
MS.gene042887.t1 MTR_4g087620 30.151 199 112 6 5 192 159 341 9.96e-20 85.9
MS.gene042887.t1 MTR_8g028720 30.612 196 106 6 10 192 146 324 1.21e-19 85.5
MS.gene042887.t1 MTR_4g117490 30.097 206 109 6 5 192 129 317 1.35e-19 86.3
MS.gene042887.t1 MTR_3g085650 32.500 200 114 8 4 191 517 707 1.78e-19 86.3
MS.gene042887.t1 MTR_3g085650 32.500 200 114 8 4 191 517 707 2.19e-19 85.9
MS.gene042887.t1 MTR_3g085650 32.500 200 114 8 4 191 517 707 2.26e-19 85.9
MS.gene042887.t1 MTR_4g117490 30.097 206 109 6 5 192 129 317 2.39e-19 85.5
MS.gene042887.t1 MTR_5g026960 28.856 201 111 5 4 191 102 283 2.54e-19 85.1
MS.gene042887.t1 MTR_2g021330 29.756 205 109 6 5 191 129 316 5.01e-19 84.3
MS.gene042887.t1 MTR_2g005620 30.198 202 113 7 8 197 195 380 6.71e-19 84.0
MS.gene042887.t1 MTR_2g021330 29.756 205 109 6 5 191 129 316 9.25e-19 84.0
MS.gene042887.t1 MTR_5g091680 30.732 205 107 7 5 191 126 313 1.10e-18 83.6
MS.gene042887.t1 MTR_3g112210 29.524 210 117 8 5 200 136 328 1.10e-18 83.2
MS.gene042887.t1 MTR_5g091680 30.732 205 107 7 5 191 124 311 1.18e-18 83.6
MS.gene042887.t1 MTR_5g091680 30.732 205 107 7 5 191 126 313 1.18e-18 83.6
MS.gene042887.t1 MTR_5g091680 30.732 205 107 7 5 191 126 313 1.24e-18 83.6
MS.gene042887.t1 MTR_8g432510 29.187 209 120 7 4 200 240 432 1.26e-18 83.2
MS.gene042887.t1 MTR_2g083940 30.693 202 112 7 8 197 139 324 1.45e-18 82.8
MS.gene042887.t1 MTR_4g103810 30.583 206 116 6 1 191 208 401 1.78e-18 82.8
MS.gene042887.t1 MTR_4g056390 29.949 197 105 5 24 192 288 479 2.06e-18 82.8
MS.gene042887.t1 MTR_2g083940 30.693 202 112 7 8 197 193 378 2.15e-18 82.4
MS.gene042887.t1 MTR_4g061320 30.392 204 114 7 5 196 144 331 2.78e-18 82.0
MS.gene042887.t1 MTR_4g103810 30.583 206 116 6 1 191 318 511 3.37e-18 82.4
MS.gene042887.t1 MTR_1g075610 27.586 203 118 6 2 192 124 309 3.63e-18 80.9
MS.gene042887.t1 MTR_2g016490 31.000 200 110 7 10 197 147 330 3.65e-18 81.6
MS.gene042887.t1 MTR_8g106960 30.244 205 108 6 5 191 222 409 7.29e-18 81.3
MS.gene042887.t1 MTR_8g106960 30.542 203 110 6 5 191 222 409 7.55e-18 81.3
MS.gene042887.t1 MTR_4g007750 30.049 203 107 8 4 191 121 303 9.55e-18 79.7
MS.gene042887.t1 MTR_8g073250 31.548 168 93 6 40 191 249 410 1.17e-17 80.5
MS.gene042887.t1 MTR_5g010030 29.851 201 111 6 5 192 145 328 1.21e-17 80.1
MS.gene042887.t1 MTR_5g024270 30.588 170 95 6 40 192 252 415 1.23e-17 80.5
MS.gene042887.t1 MTR_8g080190 31.500 200 110 7 7 191 489 676 1.63e-17 80.5
MS.gene042887.t1 MTR_3g060390 29.730 185 108 5 9 192 122 285 1.85e-17 79.3
MS.gene042887.t1 MTR_3g460980 29.730 185 108 5 9 192 126 289 2.27e-17 79.0
MS.gene042887.t1 MTR_3g086530 42.857 112 31 4 10 88 201 312 2.51e-17 78.6
MS.gene042887.t1 MTR_8g461040 29.952 207 106 6 5 191 130 317 3.62e-17 79.3
MS.gene042887.t1 MTR_2g072840 29.756 205 109 6 5 191 39 226 4.20e-17 79.0
MS.gene042887.t1 MTR_7g110060 30.811 185 100 7 10 182 182 350 4.29e-17 78.6
MS.gene042887.t1 MTR_8g012450 26.943 193 114 4 10 191 108 284 6.22e-17 78.2
MS.gene042887.t1 MTR_2g072840 29.756 205 109 6 5 191 129 316 6.46e-17 78.6
MS.gene042887.t1 MTR_2g072840 29.756 205 109 6 5 191 129 316 6.81e-17 78.6
MS.gene042887.t1 MTR_2g084555 30.909 165 94 5 44 192 318 478 7.17e-17 78.6
MS.gene042887.t1 MTR_8g012450 26.943 193 114 4 10 191 108 284 8.52e-17 78.2
MS.gene042887.t1 MTR_3g089510 30.332 211 100 8 5 191 117 304 1.44e-16 77.4
MS.gene042887.t1 MTR_3g089510 30.332 211 100 8 5 191 129 316 1.70e-16 77.4
MS.gene042887.t1 MTR_3g096960 29.817 218 120 7 4 197 126 334 2.48e-16 76.6
MS.gene042887.t1 MTR_7g076030 29.500 200 113 7 4 191 135 318 2.66e-16 76.3
MS.gene042887.t1 MTR_7g076030 37.815 119 61 4 4 110 242 359 9.15e-16 75.1
MS.gene042887.t1 MTR_1g061690 28.492 179 104 6 31 192 308 479 1.26e-15 74.7
MS.gene042887.t1 MTR_6g079470 29.756 205 109 6 5 191 193 380 1.29e-15 74.7
MS.gene042887.t1 MTR_3g085650 31.016 187 108 7 4 178 517 694 5.22e-15 73.2
MS.gene042887.t1 MTR_4g088750 34.259 108 59 3 1 98 302 407 3.45e-14 70.5
MS.gene042887.t1 MTR_4g107280 32.710 107 64 1 8 106 161 267 3.86e-14 70.1
MS.gene042887.t1 MTR_4g107280 32.710 107 64 1 8 106 200 306 3.92e-14 70.5
MS.gene042887.t1 MTR_8g080190 35.294 119 63 3 4 110 486 602 9.34e-14 69.3
MS.gene042887.t1 MTR_4g132860 42.105 95 43 3 14 98 193 285 1.26e-13 68.6
MS.gene042887.t1 MTR_6g012980 30.052 193 78 6 10 191 179 325 1.41e-13 68.6
MS.gene042887.t1 MTR_4g088745 32.407 108 61 3 1 98 146 251 1.98e-13 68.2
MS.gene042887.t1 MTR_4g088755 32.407 108 61 3 1 98 141 246 2.29e-13 67.8
MS.gene042887.t1 MTR_1g080020 36.937 111 58 2 6 106 111 219 2.64e-13 67.0
MS.gene042887.t1 MTR_5g008860 25.701 214 126 7 2 199 239 435 4.41e-13 67.4
MS.gene042887.t1 MTR_2g013900 32.479 117 67 3 1 107 263 377 5.44e-13 67.0
MS.gene042887.t1 MTR_4g087620 39.000 100 48 4 5 93 159 256 7.81e-13 65.9
MS.gene042887.t1 MTR_6g080470 23.039 204 131 4 4 197 113 300 1.45e-12 65.9
MS.gene042887.t1 MTR_5g017140 30.233 129 74 4 8 122 111 237 2.42e-12 64.7
MS.gene042887.t1 MTR_4g094430 26.531 196 112 6 10 191 110 287 2.56e-12 64.7
MS.gene042887.t1 MTR_2g023890 36.937 111 58 4 10 112 110 216 3.35e-12 64.3
MS.gene042887.t1 MTR_8g100085 36.735 98 50 3 8 95 240 335 4.70e-12 64.3
MS.gene042887.t1 MTR_4g109090 25.263 190 112 4 10 186 64 236 5.30e-12 64.3
MS.gene042887.t1 MTR_4g109090 25.263 190 112 4 10 186 212 384 6.85e-12 63.9
MS.gene042887.t1 MTR_6g013030 25.000 188 115 3 10 186 217 389 8.08e-12 63.9
MS.gene042887.t1 MTR_4g105770 38.235 102 51 4 7 98 164 263 9.67e-12 63.2
MS.gene042887.t1 MTR_1g048630 35.652 115 61 3 3 106 104 216 9.85e-12 63.5
MS.gene042887.t1 MTR_7g073520 37.500 88 47 1 10 89 254 341 1.12e-11 63.2
MS.gene042887.t1 MTR_8g092290 29.457 129 80 2 2 119 240 368 1.14e-11 63.2
MS.gene042887.t1 MTR_2g032060 33.628 113 62 4 10 110 110 221 1.21e-11 62.8
MS.gene042887.t1 MTR_7g116390 27.604 192 85 7 12 191 125 274 1.22e-11 62.8
MS.gene042887.t1 MTR_4g128820 26.733 202 91 5 10 200 116 271 1.46e-11 62.8
MS.gene042887.t1 MTR_3g034100 39.130 92 44 3 14 95 195 284 1.48e-11 62.8
MS.gene042887.t1 MTR_3g040810 24.623 199 121 5 1 186 135 317 2.66e-11 62.0
MS.gene042887.t1 MTR_3g078000 37.255 102 52 4 7 98 163 262 2.76e-11 62.0
MS.gene042887.t1 MTR_6g090470 38.235 102 49 3 2 91 165 264 3.52e-11 61.6
MS.gene042887.t1 MTR_2g020210 27.027 148 93 4 2 136 201 346 3.59e-11 62.0
MS.gene042887.t1 MTR_2g090405 30.328 122 70 4 2 110 240 359 6.60e-11 61.2
MS.gene042887.t1 MTR_8g464430 29.787 141 81 4 59 191 6 136 8.91e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene042887.t1 AT1G73450 83.654 208 26 1 1 200 945 1152 1.05e-124 379
MS.gene042887.t1 AT1G73460 83.654 208 26 1 1 200 962 1169 2.05e-124 378
MS.gene042887.t1 AT1G73460 83.654 208 26 1 1 200 962 1169 2.05e-124 378
MS.gene042887.t1 AT3G17750 85.096 208 23 1 1 200 931 1138 3.18e-122 372
MS.gene042887.t1 AT2G40120 60.000 200 72 1 1 192 365 564 2.21e-84 260
MS.gene042887.t1 AT4G03175 52.174 92 44 0 101 192 2 93 2.29e-32 112
MS.gene042887.t1 AT4G24740 34.222 225 112 7 4 192 97 321 1.22e-30 114
MS.gene042887.t1 AT4G24740 34.222 225 112 7 4 192 97 321 1.22e-30 114
MS.gene042887.t1 AT4G24740 34.222 225 112 7 4 192 97 321 1.22e-30 114
MS.gene042887.t1 AT4G24740 34.222 225 112 7 4 192 162 386 6.38e-30 114
MS.gene042887.t1 AT4G24740 34.222 225 112 7 4 192 200 424 8.49e-30 114
MS.gene042887.t1 AT4G24740 34.597 211 102 7 18 192 8 218 5.93e-29 107
MS.gene042887.t1 AT4G24740 34.597 211 102 7 18 192 8 218 5.93e-29 107
MS.gene042887.t1 AT3G53570 33.333 222 109 6 10 192 209 430 7.81e-28 108
MS.gene042887.t1 AT3G53570 33.333 222 109 6 10 192 209 430 7.81e-28 108
MS.gene042887.t1 AT3G53570 33.333 222 109 6 10 192 223 444 7.91e-28 109
MS.gene042887.t1 AT3G53570 33.333 222 109 6 10 192 223 444 7.91e-28 109
MS.gene042887.t1 AT3G53570 33.333 222 109 6 10 192 223 444 7.91e-28 109
MS.gene042887.t1 AT4G32660 33.036 224 114 6 4 191 61 284 8.61e-28 106
MS.gene042887.t1 AT4G32660 33.036 224 114 6 4 191 173 396 4.04e-27 106
MS.gene042887.t1 AT4G32660 33.036 224 114 6 4 191 165 388 4.96e-27 106
MS.gene042887.t1 AT3G53640 31.707 205 117 5 10 192 437 640 1.56e-25 103
MS.gene042887.t1 AT4G24740 40.816 147 56 4 4 119 97 243 1.58e-25 99.4
MS.gene042887.t1 AT1G13350 30.918 207 120 5 8 192 627 832 4.76e-25 102
MS.gene042887.t1 AT5G35980 33.197 244 107 8 10 197 232 475 5.76e-25 102
MS.gene042887.t1 AT4G24740 40.816 147 56 4 4 119 200 346 6.10e-25 100
MS.gene042887.t1 AT1G13350 30.918 207 120 5 8 192 581 786 8.54e-25 101
MS.gene042887.t1 AT5G35980 33.197 244 107 8 10 197 232 475 9.19e-25 101
MS.gene042887.t1 AT1G13350 31.884 207 118 6 8 192 554 759 1.03e-24 101
MS.gene042887.t1 AT5G35980 33.197 244 107 8 10 197 197 440 1.07e-24 101
MS.gene042887.t1 AT3G25840 31.429 210 122 7 4 192 725 933 2.03e-24 100
MS.gene042887.t1 AT3G25840 31.429 210 122 7 4 192 463 671 2.08e-23 97.4
MS.gene042887.t1 AT4G32660 36.306 157 69 4 4 129 173 329 3.12e-23 95.5
MS.gene042887.t1 AT1G76540 30.500 200 110 6 4 191 122 304 4.33e-22 91.7
MS.gene042887.t1 AT5G26751 31.188 202 111 7 8 197 174 359 1.17e-20 89.0
MS.gene042887.t1 AT1G20930 29.756 205 104 7 8 192 123 307 2.09e-20 87.0
MS.gene042887.t1 AT2G46070 29.897 194 110 4 10 192 150 328 5.16e-20 86.7
MS.gene042887.t1 AT2G46070 29.897 194 110 4 10 192 184 362 5.52e-20 87.0
MS.gene042887.t1 AT4G19110 28.061 196 109 5 9 191 51 227 7.35e-20 86.7
MS.gene042887.t1 AT5G14640 31.188 202 111 7 8 197 179 364 9.16e-20 86.3
MS.gene042887.t1 AT5G14640 31.188 202 111 7 8 197 179 364 9.16e-20 86.3
MS.gene042887.t1 AT4G19110 27.363 201 114 5 4 191 102 283 9.56e-20 86.7
MS.gene042887.t1 AT4G19110 27.363 201 114 5 4 191 102 283 9.67e-20 86.7
MS.gene042887.t1 AT3G14720 32.020 203 107 6 5 191 129 316 1.28e-19 86.7
MS.gene042887.t1 AT4G36450 30.000 200 112 5 9 197 140 322 1.62e-19 85.1
MS.gene042887.t1 AT1G09840 31.443 194 105 7 8 189 61 238 1.77e-19 84.3
MS.gene042887.t1 AT3G14720 32.020 203 107 6 5 191 129 316 1.81e-19 85.5
MS.gene042887.t1 AT3G14720 32.020 203 107 6 5 191 129 316 1.81e-19 85.5
MS.gene042887.t1 AT3G44850 31.361 169 94 6 41 192 319 482 1.90e-19 85.9
MS.gene042887.t1 AT3G05840 30.198 202 113 7 8 197 178 363 2.03e-19 85.5
MS.gene042887.t1 AT3G05840 30.198 202 113 7 8 197 178 363 2.03e-19 85.5
MS.gene042887.t1 AT3G59790 29.381 194 110 4 10 192 169 346 2.11e-19 85.1
MS.gene042887.t1 AT4G18710 31.000 200 110 7 10 197 147 330 2.16e-19 85.1
MS.gene042887.t1 AT4G11330 31.034 203 106 8 5 192 147 330 2.47e-19 85.1
MS.gene042887.t1 AT1G10210 30.435 207 113 6 5 197 136 325 2.72e-19 84.7
MS.gene042887.t1 AT1G10210 30.435 207 113 6 5 197 136 325 2.72e-19 84.7
MS.gene042887.t1 AT1G10210 30.435 207 113 6 5 197 136 325 2.72e-19 84.7
MS.gene042887.t1 AT2G01450 30.516 213 113 7 5 197 120 317 2.88e-19 85.1
MS.gene042887.t1 AT2G01450 30.516 213 113 7 5 197 120 317 2.88e-19 85.1
MS.gene042887.t1 AT2G01450 30.516 213 113 7 5 197 120 317 2.88e-19 85.1
MS.gene042887.t1 AT2G01450 30.516 213 113 7 5 197 120 317 2.88e-19 85.1
MS.gene042887.t1 AT4G01370 30.612 196 106 6 10 192 152 330 4.94e-19 84.0
MS.gene042887.t1 AT1G01560 30.097 206 110 7 10 198 149 337 6.35e-19 83.6
MS.gene042887.t1 AT2G18170 28.641 206 116 6 9 200 140 328 9.76e-19 83.2
MS.gene042887.t1 AT4G13020 28.500 200 115 4 4 192 102 284 1.16e-18 83.6
MS.gene042887.t1 AT4G35500 31.361 169 94 6 40 192 255 417 1.18e-18 83.6
MS.gene042887.t1 AT4G35500 31.361 169 94 6 40 192 256 418 1.19e-18 83.6
MS.gene042887.t1 AT3G61160 28.708 209 121 6 4 200 203 395 1.22e-18 83.2
MS.gene042887.t1 AT4G13020 28.500 200 115 4 4 192 102 284 1.23e-18 83.2
MS.gene042887.t1 AT4G13020 28.500 200 115 4 4 192 111 293 1.33e-18 83.2
MS.gene042887.t1 AT3G61160 28.708 209 121 6 4 200 203 395 1.38e-18 83.2
MS.gene042887.t1 AT4G13020 28.500 200 115 4 4 192 111 293 1.41e-18 82.8
MS.gene042887.t1 AT4G13020 28.500 200 115 4 4 192 110 292 1.45e-18 83.2
MS.gene042887.t1 AT4G13020 28.500 200 115 4 4 192 110 292 1.46e-18 83.2
MS.gene042887.t1 AT3G61160 28.708 209 121 6 4 200 210 402 1.47e-18 83.2
MS.gene042887.t1 AT4G13020 28.500 200 115 4 4 192 102 284 1.49e-18 82.8
MS.gene042887.t1 AT1G09840 30.693 202 112 7 8 197 188 373 1.49e-18 83.2
MS.gene042887.t1 AT1G09840 30.693 202 112 7 8 197 188 373 1.49e-18 83.2
MS.gene042887.t1 AT1G09840 30.693 202 112 7 8 197 188 373 1.49e-18 83.2
MS.gene042887.t1 AT1G09840 30.693 202 112 7 8 197 188 373 1.49e-18 83.2
MS.gene042887.t1 AT1G09840 30.693 202 112 7 8 197 188 373 1.49e-18 83.2
MS.gene042887.t1 AT1G09840 30.693 202 112 7 8 197 188 373 1.49e-18 83.2
MS.gene042887.t1 AT1G09840 30.693 202 112 7 8 197 188 373 1.49e-18 83.2
MS.gene042887.t1 AT1G09840 30.693 202 112 7 8 197 188 373 1.49e-18 83.2
MS.gene042887.t1 AT1G09840 30.693 202 112 7 8 197 188 373 1.49e-18 83.2
MS.gene042887.t1 AT1G09840 30.693 202 112 7 8 197 188 373 1.49e-18 83.2
MS.gene042887.t1 AT4G13020 28.500 200 115 4 4 192 102 284 1.50e-18 82.8
MS.gene042887.t1 AT5G45430 28.218 202 111 6 4 191 102 283 1.52e-18 83.2
MS.gene042887.t1 AT1G57870 30.198 202 113 7 8 197 187 372 1.66e-18 82.8
MS.gene042887.t1 AT5G45430 28.218 202 111 6 4 191 102 283 1.90e-18 82.8
MS.gene042887.t1 AT1G57870 30.198 202 113 7 8 197 187 372 1.98e-18 82.8
MS.gene042887.t1 AT1G57870 30.198 202 113 7 8 197 187 372 1.98e-18 82.8
MS.gene042887.t1 AT1G57870 30.198 202 113 7 8 197 187 372 1.98e-18 82.8
MS.gene042887.t1 AT1G06390 30.198 202 113 7 8 197 175 360 2.46e-18 82.4
MS.gene042887.t1 AT1G06390 30.198 202 113 7 8 197 175 360 2.46e-18 82.4
MS.gene042887.t1 AT5G19010 32.000 200 101 7 5 186 129 311 3.10e-18 82.4
MS.gene042887.t1 AT4G00720 30.097 206 116 7 4 197 239 428 5.99e-18 81.6
MS.gene042887.t1 AT2G17530 30.178 169 96 6 40 192 254 416 8.19e-18 80.9
MS.gene042887.t1 AT2G17530 30.178 169 96 6 40 192 254 416 8.19e-18 80.9
MS.gene042887.t1 AT4G24740 41.379 116 37 4 4 88 200 315 8.51e-18 80.1
MS.gene042887.t1 AT3G18040 30.732 205 107 6 5 191 39 226 1.02e-17 80.5
MS.gene042887.t1 AT3G61160 37.815 119 61 4 4 110 203 320 1.08e-17 80.1
MS.gene042887.t1 AT3G61160 34.559 136 76 4 4 127 203 337 1.25e-17 80.1
MS.gene042887.t1 AT3G61160 37.815 119 61 4 4 110 210 327 1.37e-17 80.1
MS.gene042887.t1 AT5G63370 27.861 201 124 7 3 191 268 459 1.41e-17 80.5
MS.gene042887.t1 AT5G63370 27.861 201 124 7 3 191 268 459 1.41e-17 80.5
MS.gene042887.t1 AT2G38620 30.542 203 106 9 4 191 59 241 1.45e-17 78.6
MS.gene042887.t1 AT3G18040 30.732 205 107 6 5 191 127 314 1.51e-17 80.5
MS.gene042887.t1 AT3G18040 30.732 205 107 6 5 191 122 309 1.53e-17 80.5
MS.gene042887.t1 AT5G22840 30.723 166 93 6 44 192 311 471 1.56e-17 80.5
MS.gene042887.t1 AT3G18040 30.732 205 107 6 5 191 236 423 1.91e-17 80.1
MS.gene042887.t1 AT5G63370 28.000 200 123 7 4 191 403 593 1.92e-17 80.1
MS.gene042887.t1 AT5G63370 28.000 200 123 7 4 191 403 593 1.92e-17 80.1
MS.gene042887.t1 AT5G63370 28.000 200 123 7 4 191 403 593 1.92e-17 80.1
MS.gene042887.t1 AT5G63370 28.000 200 123 7 4 191 403 593 1.92e-17 80.1
MS.gene042887.t1 AT5G63370 28.000 200 123 7 4 191 403 593 1.92e-17 80.1
MS.gene042887.t1 AT1G67580 31.500 200 110 7 7 191 510 697 2.10e-17 80.1
MS.gene042887.t1 AT1G67580 31.500 200 110 7 7 191 510 697 2.10e-17 80.1
MS.gene042887.t1 AT3G18040 30.732 205 107 6 5 191 236 423 2.56e-17 79.7
MS.gene042887.t1 AT2G30980 29.703 202 114 7 8 197 177 362 2.62e-17 79.3
MS.gene042887.t1 AT4G08500 32.000 200 77 7 8 194 437 590 3.12e-17 79.7
MS.gene042887.t1 AT2G38620 30.542 203 106 9 4 191 121 303 3.19e-17 78.6
MS.gene042887.t1 AT1G07880 28.293 205 117 6 5 196 137 324 3.35e-17 79.0
MS.gene042887.t1 AT1G73670 29.268 205 112 7 5 192 194 382 4.41e-17 79.0
MS.gene042887.t1 AT4G18710 38.938 113 56 4 10 110 141 252 7.89e-17 77.0
MS.gene042887.t1 AT2G43790 28.643 199 115 5 5 192 167 349 9.71e-17 77.8
MS.gene042887.t1 AT3G53030 30.723 166 93 6 44 192 307 467 1.01e-16 78.2
MS.gene042887.t1 AT2G46070 28.723 188 108 4 10 186 150 322 1.48e-16 76.6
MS.gene042887.t1 AT2G42880 30.244 205 108 7 5 191 129 316 1.75e-16 77.4
MS.gene042887.t1 AT3G45640 27.619 210 114 7 5 197 142 330 1.91e-16 76.6
MS.gene042887.t1 AT2G42880 30.244 205 108 7 5 191 129 316 1.92e-16 77.4
MS.gene042887.t1 AT1G53510 29.000 200 107 7 10 191 134 316 2.64e-16 77.0
MS.gene042887.t1 AT3G54180 29.208 202 110 8 4 191 119 301 3.58e-16 75.5
MS.gene042887.t1 AT1G08650 28.000 200 93 6 2 191 115 273 8.89e-16 73.9
MS.gene042887.t1 AT1G18150 29.126 206 111 6 5 192 208 396 3.15e-15 73.6
MS.gene042887.t1 AT1G18150 29.126 206 111 6 5 192 208 396 3.15e-15 73.6
MS.gene042887.t1 AT1G18150 29.126 206 111 6 5 192 208 396 3.15e-15 73.6
MS.gene042887.t1 AT1G01560 29.508 183 99 6 10 179 149 314 4.69e-15 72.8
MS.gene042887.t1 AT1G08650 35.652 115 63 3 2 106 115 228 4.80e-15 72.0
MS.gene042887.t1 AT3G48750 27.500 200 117 6 4 191 104 287 6.59e-15 72.0
MS.gene042887.t1 AT4G26890 29.268 205 96 5 2 200 101 262 7.91e-15 72.4
MS.gene042887.t1 AT5G39440 26.943 193 85 4 10 192 125 271 1.53e-14 71.6
MS.gene042887.t1 AT5G63370 33.333 120 66 3 3 110 268 385 3.17e-14 70.5
MS.gene042887.t1 AT5G63370 33.613 119 65 3 4 110 403 519 3.34e-14 70.9
MS.gene042887.t1 AT5G63370 33.613 119 65 3 4 110 403 519 3.34e-14 70.9
MS.gene042887.t1 AT5G55090 27.638 199 91 6 2 191 102 256 5.34e-14 70.1
MS.gene042887.t1 AT1G62400 42.105 95 43 3 14 98 199 291 9.39e-14 69.3
MS.gene042887.t1 AT5G55090 27.638 199 91 6 2 191 164 318 9.74e-14 69.3
MS.gene042887.t1 AT3G29160 33.871 124 69 3 10 122 126 247 1.32e-13 68.6
MS.gene042887.t1 AT1G01560 42.105 95 42 4 10 93 149 241 1.43e-13 67.8
MS.gene042887.t1 AT1G01560 42.105 95 42 4 10 93 149 241 1.43e-13 67.8
MS.gene042887.t1 AT1G54610 27.000 200 115 6 10 195 225 407 1.49e-13 68.9
MS.gene042887.t1 AT1G54610 27.000 200 115 6 10 195 225 407 1.49e-13 68.9
MS.gene042887.t1 AT1G54610 27.000 200 115 6 10 195 225 407 1.49e-13 68.9
MS.gene042887.t1 AT3G29160 33.871 124 69 3 10 122 126 247 2.23e-13 68.2
MS.gene042887.t1 AT3G29160 33.871 124 69 3 10 122 126 247 2.23e-13 68.2
MS.gene042887.t1 AT2G34290 37.500 104 50 2 2 90 105 208 4.53e-13 66.2
MS.gene042887.t1 AT2G42550 35.294 119 51 5 4 99 115 230 4.82e-13 67.0
MS.gene042887.t1 AT5G63610 28.774 212 118 9 4 191 131 333 7.24e-13 66.6
MS.gene042887.t1 AT3G04530 33.962 106 60 3 10 106 120 224 8.53e-13 65.9
MS.gene042887.t1 AT1G74330 24.500 200 119 4 2 186 220 402 8.95e-13 66.6
MS.gene042887.t1 AT1G74330 24.500 200 119 4 2 186 220 402 9.30e-13 66.6
MS.gene042887.t1 AT1G74330 24.500 200 119 4 2 186 220 402 9.91e-13 66.6
MS.gene042887.t1 AT4G29810 40.000 100 46 3 4 91 168 265 1.46e-12 65.9
MS.gene042887.t1 AT4G29810 40.000 100 46 3 4 91 177 274 1.70e-12 65.5
MS.gene042887.t1 AT2G05060 37.374 99 47 2 4 89 122 218 2.40e-12 64.7
MS.gene042887.t1 AT1G50240 35.652 115 61 3 3 106 103 215 2.48e-12 65.5
MS.gene042887.t1 AT1G50240 35.652 115 61 3 3 106 103 215 2.48e-12 65.5
MS.gene042887.t1 AT4G29810 40.000 100 46 3 4 91 177 274 2.74e-12 64.7
MS.gene042887.t1 AT5G39420 25.962 208 123 5 2 195 204 394 3.51e-12 65.1
MS.gene042887.t1 AT2G41930 34.677 124 56 6 4 102 111 234 3.65e-12 64.3
MS.gene042887.t1 AT1G18670 24.623 199 121 4 2 186 230 413 6.31e-12 64.3
MS.gene042887.t1 AT1G18670 24.623 199 121 4 2 186 230 413 6.49e-12 64.3
MS.gene042887.t1 AT1G18670 24.623 199 121 4 2 186 230 413 6.98e-12 63.9
MS.gene042887.t1 AT5G04510 30.579 121 61 3 8 107 148 266 1.08e-11 63.2
MS.gene042887.t1 AT1G07880 37.000 100 50 4 5 93 137 234 1.13e-11 62.4
MS.gene042887.t1 AT5G04510 30.579 121 61 3 8 107 148 266 1.15e-11 63.2
MS.gene042887.t1 AT1G03740 24.623 199 120 5 2 187 312 493 1.65e-11 62.8
MS.gene042887.t1 AT1G03740 24.623 199 120 5 2 187 312 493 1.77e-11 62.8
MS.gene042887.t1 AT5G50860 27.517 149 93 3 1 136 212 358 2.32e-11 62.4
MS.gene042887.t1 AT5G50860 27.517 149 93 3 1 136 212 358 2.43e-11 62.4
MS.gene042887.t1 AT5G04510 30.579 121 61 3 8 107 148 266 2.61e-11 61.6
MS.gene042887.t1 AT3G08730 35.556 90 50 1 8 89 238 327 3.44e-11 62.0
MS.gene042887.t1 AT3G08730 35.556 90 50 1 8 89 238 327 3.44e-11 62.0
MS.gene042887.t1 AT5G12090 33.000 100 55 3 2 89 135 234 6.82e-11 60.8
MS.gene042887.t1 AT5G44290 23.944 213 112 6 2 191 236 421 7.17e-11 61.2
MS.gene042887.t1 AT5G44290 23.944 213 112 6 2 191 236 421 7.29e-11 61.2
MS.gene042887.t1 AT5G44290 23.944 213 112 6 2 191 236 421 7.29e-11 61.2
MS.gene042887.t1 AT5G44290 23.944 213 112 6 2 191 236 421 7.29e-11 61.2
MS.gene042887.t1 AT5G44290 23.944 213 112 6 2 191 236 421 7.29e-11 61.2
MS.gene042887.t1 AT5G44290 23.944 213 112 6 2 191 236 421 7.29e-11 61.2
MS.gene042887.t1 AT1G33770 37.755 98 46 4 2 86 240 335 7.84e-11 60.8
MS.gene042887.t1 AT3G08720 35.106 94 53 1 8 93 244 337 8.18e-11 60.8
MS.gene042887.t1 AT3G08720 35.106 94 53 1 8 93 244 337 8.18e-11 60.8
MS.gene042887.t1 AT3G08720 35.106 94 53 1 8 93 244 337 8.18e-11 60.8
MS.gene042887.t1 AT3G08720 35.106 94 53 1 8 93 244 337 8.18e-11 60.8
MS.gene042887.t1 AT5G44290 24.402 209 108 6 2 187 236 417 8.41e-11 60.8

Find 58 sgRNAs with CRISPR-Local

Find 127 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGTTACTAGCTAGGGTAAT+TGG 0.218504 6.1:+63935865 MS.gene042887:CDS
CTTGAAGCCGGAGAATATTT+TGG 0.240496 6.1:+63934759 MS.gene042887:CDS
TGCCTCAAAGATGTCTTCTT+TGG 0.277464 6.1:-63936444 None:intergenic
GTCAATTACCATTCAATGTT+TGG 0.292705 6.1:+63934693 MS.gene042887:intron
GATGCAGAAGGTCGCTTCTT+CGG 0.294316 6.1:-63936528 None:intergenic
TGAATACTTCAAGATGATAT+TGG 0.328889 6.1:-63936591 None:intergenic
ATGCAGAAGGTCGCTTCTTC+GGG 0.331076 6.1:-63936527 None:intergenic
TATTATTATACTTACATTGC+CGG 0.345011 6.1:-63934973 None:intergenic
GCTAGCATACTTTGACCAAT+AGG 0.356888 6.1:-63935898 None:intergenic
CTTCACAATGCCAAGATTGC+AGG 0.358829 6.1:+63934225 None:intergenic
ACGTTGCCGGGGAATCGTTT+TGG 0.362389 6.1:-63935846 None:intergenic
CGTGCTCCTGAGGTTATTCT+CGG 0.367843 6.1:+63934888 MS.gene042887:CDS
CGTTACTAGCTAGGGTAATT+GGG 0.381867 6.1:+63935866 MS.gene042887:CDS
ACTCCACAAACCTGCAATCT+TGG 0.385584 6.1:-63934235 None:intergenic
AAGATTGATATCTGGTCTCT+TGG 0.415156 6.1:+63934927 MS.gene042887:CDS
ACCCTAGCTAGTAACGTTGC+CGG 0.421257 6.1:-63935859 None:intergenic
CTTCAATATTTACATAACCT+TGG 0.431917 6.1:+63934721 MS.gene042887:CDS
AAGTGCTTCCAAACATTGAA+TGG 0.439190 6.1:-63934701 None:intergenic
CCCTAGCTAGTAACGTTGCC+GGG 0.442685 6.1:-63935858 None:intergenic
CAAGATGATATTGGTTCGTA+AGG 0.449658 6.1:-63936582 None:intergenic
ATTGGGATCATCGGTCCTAT+TGG 0.459571 6.1:+63935883 MS.gene042887:CDS
TTGATATGCAGGAAAGCAAC+AGG 0.462723 6.1:+63936406 MS.gene042887:intron
ATGACAAGAAGATTGATATC+TGG 0.463726 6.1:+63934919 MS.gene042887:CDS
CTGGTCTCTTGGATGCATCT+TGG 0.473461 6.1:+63934938 MS.gene042887:CDS
TTCCAAAGAAGACATCTTTG+AGG 0.490294 6.1:+63936442 MS.gene042887:CDS
TATGCTTTATGAGAGGAATC+AGG 0.494533 6.1:+63935960 MS.gene042887:CDS
GGTCAAAGTATGCTAGCAAA+AGG 0.496032 6.1:+63935904 MS.gene042887:CDS
CCCCGGCAACGTTACTAGCT+AGG 0.503488 6.1:+63935857 MS.gene042887:CDS
CAACGAAGTCAATGAAGCCT+TGG 0.513679 6.1:-63936485 None:intergenic
GAGGTGAAGGTCATTGATCT+TGG 0.522315 6.1:+63934802 MS.gene042887:CDS
CCCGGCAACGTTACTAGCTA+GGG 0.522921 6.1:+63935858 MS.gene042887:CDS
CTGAAACTCTAAAGCACCCC+TGG 0.524226 6.1:+63936550 MS.gene042887:CDS
TTCGTAAGGGTATGATAACC+AGG 0.528514 6.1:-63936568 None:intergenic
TTTGAGGCATAGATTACCGA+TGG 0.557764 6.1:+63936458 MS.gene042887:CDS
AATAACCTCAGGAGCACGAT+AGG 0.565802 6.1:-63934883 None:intergenic
CTTATTCCAAAACGATTCCC+CGG 0.574030 6.1:+63935840 MS.gene042887:CDS
CTTCGTTGCTCATTTGCTCG+AGG 0.578087 6.1:+63936500 MS.gene042887:CDS
ATCTTGGCAGAACTTTGTAC+CGG 0.579038 6.1:+63934954 MS.gene042887:CDS
AGTCACAATGTATTAGTCCA+AGG 0.583347 6.1:-63934738 None:intergenic
AATACATTGTGACTTGAAGC+CGG 0.584972 6.1:+63934747 MS.gene042887:CDS
GTGCTCCTGAGGTTATTCTC+GGG 0.587936 6.1:+63934889 MS.gene042887:CDS
AAGTATGCTAGCAAAAGGAC+GGG 0.589744 6.1:+63935909 MS.gene042887:CDS
AAAGTATGCTAGCAAAAGGA+CGG 0.592834 6.1:+63935908 MS.gene042887:CDS
TTGAGGCATAGATTACCGAT+GGG 0.601000 6.1:+63936459 MS.gene042887:CDS
GCTAGGGTAATTGGGATCAT+CGG 0.603278 6.1:+63935874 MS.gene042887:CDS
TTTAGAGTTTCAGATGCAGA+AGG 0.611844 6.1:-63936540 None:intergenic
AAGATGATATTGGTTCGTAA+GGG 0.614064 6.1:-63936581 None:intergenic
CTACAGCCGATGTGAGGTGA+AGG 0.619012 6.1:+63934789 MS.gene042887:CDS
AAAATCATATGCTTTATGAG+AGG 0.623112 6.1:+63935953 MS.gene042887:CDS
CAGGTCCTATCGTGCTCCTG+AGG 0.625226 6.1:+63934878 MS.gene042887:intron
GAAAGCCCGAGAATAACCTC+AGG 0.637971 6.1:-63934894 None:intergenic
TAAAAGCTACAGCCGATGTG+AGG 0.648020 6.1:+63934783 MS.gene042887:CDS
TCGTAAGGGTATGATAACCA+GGG 0.665522 6.1:-63936567 None:intergenic
CCTAGCTAGTAACGTTGCCG+GGG 0.670246 6.1:-63935857 None:intergenic
CGTAAGGGTATGATAACCAG+GGG 0.686121 6.1:-63936566 None:intergenic
CAATGACCTTCACCTCACAT+CGG 0.686191 6.1:-63934795 None:intergenic
TGAGGCATAGATTACCGATG+GGG 0.713357 6.1:+63936460 MS.gene042887:CDS
GAGGCATAGATTACCGATGG+GGG 0.717861 6.1:+63936461 MS.gene042887:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAAATTTGAAAATGATTT+GGG + chr6.1:63935427-63935446 MS.gene042887:intron 10.0%
!!! AGTTGATTTAAAATTATATT+AGG + chr6.1:63934499-63934518 MS.gene042887:intron 10.0%
!!! TTTTAAATTTGAAAATGATT+TGG + chr6.1:63935426-63935445 MS.gene042887:intron 10.0%
!! AAATAAAAGAGTTTAAATGA+AGG + chr6.1:63934551-63934570 MS.gene042887:intron 15.0%
!! AATAAAAGAGTTTAAATGAA+GGG + chr6.1:63934552-63934571 MS.gene042887:intron 15.0%
!!! AGTCAATTTTAGAAATTTTA+GGG - chr6.1:63936024-63936043 None:intergenic 15.0%
!!! ATTTATATTCTACATTTTTG+AGG + chr6.1:63935286-63935305 MS.gene042887:intron 15.0%
!! CATTGTATGTTTAATTATCA+TGG + chr6.1:63936356-63936375 MS.gene042887:intron 20.0%
!! GCTTAAGTTTGAAAAATTTA+TGG - chr6.1:63935026-63935045 None:intergenic 20.0%
!! TATTATTATACTTACATTGC+CGG - chr6.1:63934976-63934995 None:intergenic 20.0%
!! TATTGTATCACTTAATCTTA+AGG + chr6.1:63935227-63935246 MS.gene042887:intron 20.0%
!!! AAAATGATTTGTGACATATT+AGG + chr6.1:63935669-63935688 MS.gene042887:intron 20.0%
!!! ATTTTTTGTGAAGTACTTAT+AGG - chr6.1:63935938-63935957 None:intergenic 20.0%
!!! CAGTCAATTTTAGAAATTTT+AGG - chr6.1:63936025-63936044 None:intergenic 20.0%
! AAAATCATATGCTTTATGAG+AGG + chr6.1:63935953-63935972 MS.gene042887:CDS 25.0%
! AGACTGTTTAAGAGAATTTA+TGG - chr6.1:63936268-63936287 None:intergenic 25.0%
! AGTATGAGCATGTTTATATT+GGG - chr6.1:63936329-63936348 None:intergenic 25.0%
! CTTCAATATTTACATAACCT+TGG + chr6.1:63934721-63934740 MS.gene042887:CDS 25.0%
! GTTTAAATGAAGGGTAAAAT+TGG + chr6.1:63934561-63934580 MS.gene042887:intron 25.0%
! TAGGATTAGATCATATTTGA+GGG + chr6.1:63934518-63934537 MS.gene042887:intron 25.0%
! TAGTATGAGCATGTTTATAT+TGG - chr6.1:63936330-63936349 None:intergenic 25.0%
! TATTCTATCCTATTCTAACT+TGG - chr6.1:63935266-63935285 None:intergenic 25.0%
! TCAGTATTCTCTTTATATAC+AGG + chr6.1:63934606-63934625 MS.gene042887:intron 25.0%
! TTAGGATTAGATCATATTTG+AGG + chr6.1:63934517-63934536 MS.gene042887:intron 25.0%
!! CTTAATCTTAAGGAAGTTTT+TGG + chr6.1:63935237-63935256 MS.gene042887:intron 25.0%
!! CTTTTAACCAAAATATTCTC+CGG - chr6.1:63934769-63934788 None:intergenic 25.0%
!! GTTTTGCTCTTTAATACATT+AGG + chr6.1:63935095-63935114 MS.gene042887:intron 25.0%
!! TGTAGGGTTTTTACATTTTT+GGG + chr6.1:63935729-63935748 MS.gene042887:intron 25.0%
!! TTGTAGGGTTTTTACATTTT+TGG + chr6.1:63935728-63935747 MS.gene042887:intron 25.0%
!!! ATGAGTTTATGTTGTTTTAG+TGG + chr6.1:63935617-63935636 MS.gene042887:intron 25.0%
ACACTTCATCAGTTTATTTC+AGG - chr6.1:63935405-63935424 None:intergenic 30.0%
AGGATTAGATCATATTTGAG+GGG + chr6.1:63934519-63934538 MS.gene042887:intron 30.0%
ATGACAAGAAGATTGATATC+TGG + chr6.1:63934919-63934938 MS.gene042887:CDS 30.0%
CAAATACCACTTACACAAAT+TGG - chr6.1:63935194-63935213 None:intergenic 30.0%
CATGGAAAAATTATTCAGTG+AGG + chr6.1:63936374-63936393 MS.gene042887:intron 30.0%
GAACACGAATGGAATTAAAT+GGG - chr6.1:63935373-63935392 None:intergenic 30.0%
GTAATTACCATAAACTCTCT+AGG - chr6.1:63936210-63936229 None:intergenic 30.0%
GTCAATTACCATTCAATGTT+TGG + chr6.1:63934693-63934712 MS.gene042887:intron 30.0%
TATATGTTCTTGCAGTTGTA+GGG + chr6.1:63935713-63935732 MS.gene042887:intron 30.0%
TTATATGTTCTTGCAGTTGT+AGG + chr6.1:63935712-63935731 MS.gene042887:intron 30.0%
TTGTCAATCGCAATAAATAG+TGG - chr6.1:63935592-63935611 None:intergenic 30.0%
! AGTTTATTTCAGGTAGTGTT+TGG - chr6.1:63935395-63935414 None:intergenic 30.0%
! TCTATTAGAGAAAAGCATAC+AGG - chr6.1:63934320-63934339 None:intergenic 30.0%
! TGTATGCTTTTCTCTAATAG+AGG + chr6.1:63934319-63934338 MS.gene042887:intron 30.0%
!! AAGATGATATTGGTTCGTAA+GGG - chr6.1:63936584-63936603 None:intergenic 30.0%
!!! TTTACATTTTTGGGTGAAAG+CGG + chr6.1:63935738-63935757 MS.gene042887:intron 30.0%
AAAGTATGCTAGCAAAAGGA+CGG + chr6.1:63935908-63935927 MS.gene042887:CDS 35.0%
AAGATTGATATCTGGTCTCT+TGG + chr6.1:63934927-63934946 MS.gene042887:CDS 35.0%
AAGTGCTTCCAAACATTGAA+TGG - chr6.1:63934704-63934723 None:intergenic 35.0%
AATACATTGTGACTTGAAGC+CGG + chr6.1:63934747-63934766 MS.gene042887:CDS 35.0%
AGAAATCAAGCTTCAAGCTT+TGG + chr6.1:63934359-63934378 MS.gene042887:intron 35.0%
AGTCACAATGTATTAGTCCA+AGG - chr6.1:63934741-63934760 None:intergenic 35.0%
GGAACACGAATGGAATTAAA+TGG - chr6.1:63935374-63935393 None:intergenic 35.0%
TAGATGCCAATTTGTGTAAG+TGG + chr6.1:63935185-63935204 MS.gene042887:intron 35.0%
TATCTACAACTAGCATGCAA+TGG + chr6.1:63934279-63934298 MS.gene042887:intron 35.0%
TATGCTTTATGAGAGGAATC+AGG + chr6.1:63935960-63935979 MS.gene042887:CDS 35.0%
TGGACTGAATATATGAGCAA+AGG - chr6.1:63934860-63934879 None:intergenic 35.0%
TGTAATGTTTGTAGTGTGAC+AGG - chr6.1:63934649-63934668 None:intergenic 35.0%
TTCCAAAGAAGACATCTTTG+AGG + chr6.1:63936442-63936461 MS.gene042887:CDS 35.0%
TTGCAATCCTAGAGAGTTTA+TGG + chr6.1:63936200-63936219 MS.gene042887:intron 35.0%
TTGTCAAATAGTTGCTCTAG+TGG + chr6.1:63935530-63935549 MS.gene042887:intron 35.0%
TTTGCTCATATATTCAGTCC+AGG + chr6.1:63934859-63934878 MS.gene042887:intron 35.0%
! GGATCAAGCAGTAAATTTTG+CGG - chr6.1:63935130-63935149 None:intergenic 35.0%
! TTTAGAGTTTCAGATGCAGA+AGG - chr6.1:63936543-63936562 None:intergenic 35.0%
! TTTGGTAGCCAAGTTAGAAT+AGG + chr6.1:63935255-63935274 MS.gene042887:intron 35.0%
!! CAAGATGATATTGGTTCGTA+AGG - chr6.1:63936585-63936604 None:intergenic 35.0%
!! TCGCTTGTATTTGCTATGTT+TGG + chr6.1:63936052-63936071 MS.gene042887:intron 35.0%
AAGTATGCTAGCAAAAGGAC+GGG + chr6.1:63935909-63935928 MS.gene042887:CDS 40.0%
ACGTTACTAGCTAGGGTAAT+TGG + chr6.1:63935865-63935884 MS.gene042887:CDS 40.0%
AGCTTGAAGCTTGATTTCTG+TGG - chr6.1:63934358-63934377 None:intergenic 40.0%
ATCTTGGCAGAACTTTGTAC+CGG + chr6.1:63934954-63934973 MS.gene042887:CDS 40.0%
CATCTAAACAATGCCATCAC+CGG - chr6.1:63935171-63935190 None:intergenic 40.0%
CGTTACTAGCTAGGGTAATT+GGG + chr6.1:63935866-63935885 MS.gene042887:CDS 40.0%
CTTATTCCAAAACGATTCCC+CGG + chr6.1:63935840-63935859 MS.gene042887:CDS 40.0%
GCTAGCATACTTTGACCAAT+AGG - chr6.1:63935901-63935920 None:intergenic 40.0%
GGTCAAAGTATGCTAGCAAA+AGG + chr6.1:63935904-63935923 MS.gene042887:CDS 40.0%
TCTCTAATAGAGGCCATAGT+CGG + chr6.1:63934329-63934348 MS.gene042887:intron 40.0%
TGCCTCAAAGATGTCTTCTT+TGG - chr6.1:63936447-63936466 None:intergenic 40.0%
TTGAAGCTTGATTTCTGTGG+AGG - chr6.1:63934355-63934374 None:intergenic 40.0%
TTGAGGCATAGATTACCGAT+GGG + chr6.1:63936459-63936478 MS.gene042887:CDS 40.0%
TTGATATGCAGGAAAGCAAC+AGG + chr6.1:63936406-63936425 MS.gene042887:intron 40.0%
! CACGTCTATTTTCGTGTTAG+AGG + chr6.1:63935054-63935073 MS.gene042887:intron 40.0%
! CTTGAAGCCGGAGAATATTT+TGG + chr6.1:63934759-63934778 MS.gene042887:CDS 40.0%
! GGCATTGTGTATTGATATGC+AGG + chr6.1:63936395-63936414 MS.gene042887:intron 40.0%
! TCGTAAGGGTATGATAACCA+GGG - chr6.1:63936570-63936589 None:intergenic 40.0%
! TTCGTAAGGGTATGATAACC+AGG - chr6.1:63936571-63936590 None:intergenic 40.0%
! TTTGAGGCATAGATTACCGA+TGG + chr6.1:63936458-63936477 MS.gene042887:CDS 40.0%
!! CTTGATTCGTGTTTTTCCTC+CGG + chr6.1:63935149-63935168 MS.gene042887:intron 40.0%
ACTCCACAAACCTGCAATCT+TGG - chr6.1:63934238-63934257 None:intergenic 45.0%
ATGCCAAGATTGCAGGTTTG+TGG + chr6.1:63934232-63934251 MS.gene042887:intron 45.0%
ATTGGGATCATCGGTCCTAT+TGG + chr6.1:63935883-63935902 MS.gene042887:CDS 45.0%
CAACGAAGTCAATGAAGCCT+TGG - chr6.1:63936488-63936507 None:intergenic 45.0%
CAATGACCTTCACCTCACAT+CGG - chr6.1:63934798-63934817 None:intergenic 45.0%
CGGAGGAAAAACACGAATCA+AGG - chr6.1:63935151-63935170 None:intergenic 45.0%
GAACTGCTGTGTAGCAGAAT+CGG + chr6.1:63935560-63935579 MS.gene042887:intron 45.0%
GAGGTGAAGGTCATTGATCT+TGG + chr6.1:63934802-63934821 MS.gene042887:CDS 45.0%
GCTAGGGTAATTGGGATCAT+CGG + chr6.1:63935874-63935893 MS.gene042887:CDS 45.0%
TAAAAGCTACAGCCGATGTG+AGG + chr6.1:63934783-63934802 MS.gene042887:CDS 45.0%
TGAGGCATAGATTACCGATG+GGG + chr6.1:63936460-63936479 MS.gene042887:CDS 45.0%
! AATAACCTCAGGAGCACGAT+AGG - chr6.1:63934886-63934905 None:intergenic 45.0%
! CGTAAGGGTATGATAACCAG+GGG - chr6.1:63936569-63936588 None:intergenic 45.0%
! GGTAGTGTTTGGAACACGAA+TGG - chr6.1:63935384-63935403 None:intergenic 45.0%
ACCCTAGCTAGTAACGTTGC+CGG - chr6.1:63935862-63935881 None:intergenic 50.0%
ATGCAGAAGGTCGCTTCTTC+GGG - chr6.1:63936530-63936549 None:intergenic 50.0%
ATTTCTGTGGAGGCCGACTA+TGG - chr6.1:63934345-63934364 None:intergenic 50.0%
CGTGCTCCTGAGGTTATTCT+CGG + chr6.1:63934888-63934907 MS.gene042887:CDS 50.0%
CTAAACAATGCCATCACCGG+AGG - chr6.1:63935168-63935187 None:intergenic 50.0%
CTGGTCTCTTGGATGCATCT+TGG + chr6.1:63934938-63934957 MS.gene042887:CDS 50.0%
CTTCGTTGCTCATTTGCTCG+AGG + chr6.1:63936500-63936519 MS.gene042887:CDS 50.0%
GAAAGCCCGAGAATAACCTC+AGG - chr6.1:63934897-63934916 None:intergenic 50.0%
GAGGCATAGATTACCGATGG+GGG + chr6.1:63936461-63936480 MS.gene042887:CDS 50.0%
GATGCAGAAGGTCGCTTCTT+CGG - chr6.1:63936531-63936550 None:intergenic 50.0%
GTGCTCCTGAGGTTATTCTC+GGG + chr6.1:63934889-63934908 MS.gene042887:CDS 50.0%
! TCGTGTTTTTCCTCCGGTGA+TGG + chr6.1:63935155-63935174 MS.gene042887:intron 50.0%
!! CTGAAACTCTAAAGCACCCC+TGG + chr6.1:63936550-63936569 MS.gene042887:CDS 50.0%
AGATTACCGATGGGGGACCA+AGG + chr6.1:63936468-63936487 MS.gene042887:CDS 55.0%
ATGAAGCCTTGGTCCCCCAT+CGG - chr6.1:63936477-63936496 None:intergenic 55.0%
CCCGGCAACGTTACTAGCTA+GGG + chr6.1:63935858-63935877 MS.gene042887:CDS 55.0%
CCCTAGCTAGTAACGTTGCC+GGG - chr6.1:63935861-63935880 None:intergenic 55.0%
CCTAGCTAGTAACGTTGCCG+GGG - chr6.1:63935860-63935879 None:intergenic 55.0%
CTACAGCCGATGTGAGGTGA+AGG + chr6.1:63934789-63934808 MS.gene042887:CDS 55.0%
GCATGCAATGGACACTGACG+TGG + chr6.1:63934291-63934310 MS.gene042887:intron 55.0%
TGCAATGGACACTGACGTGG+CGG + chr6.1:63934294-63934313 MS.gene042887:intron 55.0%
! ACGTTGCCGGGGAATCGTTT+TGG - chr6.1:63935849-63935868 None:intergenic 55.0%
CAGGTCCTATCGTGCTCCTG+AGG + chr6.1:63934878-63934897 MS.gene042887:intron 60.0%
CCCCGGCAACGTTACTAGCT+AGG + chr6.1:63935857-63935876 MS.gene042887:CDS 60.0%
! CTCAGGAGCACGATAGGACC+TGG - chr6.1:63934880-63934899 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 63934232 63936605 63934232 ID=MS.gene042887
chr6.1 mRNA 63934232 63936605 63934232 ID=MS.gene042887.t1;Parent=MS.gene042887
chr6.1 exon 63934232 63934246 63934232 ID=MS.gene042887.t1.exon1;Parent=MS.gene042887.t1
chr6.1 CDS 63934232 63934246 63934232 ID=cds.MS.gene042887.t1;Parent=MS.gene042887.t1
chr6.1 exon 63934694 63934848 63934694 ID=MS.gene042887.t1.exon2;Parent=MS.gene042887.t1
chr6.1 CDS 63934694 63934848 63934694 ID=cds.MS.gene042887.t1;Parent=MS.gene042887.t1
chr6.1 exon 63934881 63934980 63934881 ID=MS.gene042887.t1.exon3;Parent=MS.gene042887.t1
chr6.1 CDS 63934881 63934980 63934881 ID=cds.MS.gene042887.t1;Parent=MS.gene042887.t1
chr6.1 exon 63935838 63935981 63935838 ID=MS.gene042887.t1.exon4;Parent=MS.gene042887.t1
chr6.1 CDS 63935838 63935981 63935838 ID=cds.MS.gene042887.t1;Parent=MS.gene042887.t1
chr6.1 exon 63936417 63936605 63936417 ID=MS.gene042887.t1.exon5;Parent=MS.gene042887.t1
chr6.1 CDS 63936417 63936605 63936417 ID=cds.MS.gene042887.t1;Parent=MS.gene042887.t1
Gene Sequence

>MS.gene042887

ATGCCAAGATTGCAGGTTTGTGGAGTTCTGCATGTTACTTTTCATTTTATCTACAACTAGCATGCAATGGACACTGACGTGGCGGCCTGTATGCTTTTCTCTAATAGAGGCCATAGTCGGCCTCCACAGAAATCAAGCTTCAAGCTTTGGACGAAATTTTATTACTTAGTATTGTTATTTTTATTTTAATTACGATATTTTTAATTCAAAATTAAATTAAGATTAGTTTAGATTTAAATTTTTAGATTGATTTAATGATTTTGTTAGAGTTGATTTAAAATTATATTAGGATTAGATCATATTTGAGGGGTAAATTTGTAAATAAAAGAGTTTAAATGAAGGGTAAAATTGGAAGAAAAAAGCTACAGCAAACTTCAGTATTCTCTTTATATACAGGCATCGATAGATTCTACACCTGTCACACTACAAACATTACAAACTTGTCTTGATTTGTTATTGCAGTCAATTACCATTCAATGTTTGGAAGCACTTCAATATTTACATAACCTTGGACTAATACATTGTGACTTGAAGCCGGAGAATATTTTGGTTAAAAGCTACAGCCGATGTGAGGTGAAGGTCATTGATCTTGGAAGTAGTTGTTTTGAGACAGATCAGTAGATCACCTTTGCTCATATATTCAGTCCAGGTCCTATCGTGCTCCTGAGGTTATTCTCGGGCTTTCATATGACAAGAAGATTGATATCTGGTCTCTTGGATGCATCTTGGCAGAACTTTGTACCGGCAATGTAAGTATAATAATAATATATAGTCAATTCAATTTCAAAATGCCATAAATTTTTCAAACTTAAGCATGTTATTCACGTCTATTTTCGTGTTAGAGGTAACATGAAAATGCTGTAGTTTTGCTCTTTAATACATTAGGTCTAATTTACCGCAAAATTTACTGCTTGATCCTTGATTCGTGTTTTTCCTCCGGTGATGGCATTGTTTAGATGCCAATTTGTGTAAGTGGTATTTGCTCTGCTGTGTTGTATTGTATCACTTAATCTTAAGGAAGTTTTTGGTAGCCAAGTTAGAATAGGATAGAATAATTTATATTCTACATTTTTGAGGCATATAAGAAATAGCACAGAAAATGATATAAATAAAAATTGTTGAAGCAAAAATAAGCTGTCCCATTTAATTCCATTCGTGTTCCAAACACTACCTGAAATAAACTGATGAAGTGTATTTTAAATTTGAAAATGATTTGGGTGTTGTTAAATAGCAGCTATAATGTAGCAGAATTTGAACAAATCGTTATTATTCTGCATTACGCAATATAGTGCAAAATATTGTCAAATAGTTGCTCTAGTGGCACTATTGAACTGCTGTGTAGCAGAATCGGAACAAACCACTATTTATTGCGATTGACAATGCTAATGAGTTTATGTTGTTTTAGTGGAACTATATAGAGAATAGAACAGATGTGTCAAAATGATTTGTGACATATTAGGTACTGTGAATTGCTTTTAAGTTATATGTTCTTGCAGTTGTAGGGTTTTTACATTTTTGGGTGAAAGCGGATGTCAAATCTGTATCTGTTTTAGTGAATACATTCATAAATCTTGATTCTTAATGAACTCAACTATACTTATTGTAGCTCTTATTCCAAAACGATTCCCCGGCAACGTTACTAGCTAGGGTAATTGGGATCATCGGTCCTATTGGTCAAAGTATGCTAGCAAAAGGACGGGATACCTATAAGTACTTCACAAAAAATCATATGCTTTATGAGAGGAATCAGGTAAGAAATTAATTTCAAAAAGCAAAACAAGAGATAGCTCCCTAAAATTTCTAAAATTGACTGTTTTCGTTCGCTTGTATTTGCTATGTTTGGATAAATAACTTAATTAAGCTTACAACATAGAAACTTATCATGTAAGTTCTTATATATGTTATTTTCTATAATAAAAGATGAAACAAAGTCAAATTATTTTCATATAAGCTGTAAGCTGATTTCATTTGCAATCCTAGAGAGTTTATGGTAATTACTTGAAAATAGCTTATGAACATGTCATAAGTTGTTTCCATAAATTCTCTTAAACAGTCTCATAAGTGCTTATGCAAGTTGATAATAAGCTCAAATAACCCAATATAAACATGCTCATACTAAACATGCATTGTATGTTTAATTATCATGGAAAAATTATTCAGTGAGGCATTGTGTATTGATATGCAGGAAAGCAACAGGTTAGAATACTTGATTCCAAAGAAGACATCTTTGAGGCATAGATTACCGATGGGGGACCAAGGCTTCATTGACTTCGTTGCTCATTTGCTCGAGGTTAACCCGAAGAAGCGACCTTCTGCATCTGAAACTCTAAAGCACCCCTGGTTATCATACCCTTACGAACCAATATCATCTTGA
Protein sequence

>MS.gene042887.t1

MPRLQSITIQCLEALQYLHNLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDQSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNLLFQNDSPATLLARVIGIIGPIGQSMLAKGRDTYKYFTKNHMLYERNQESNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEVNPKKRPSASETLKHPWLSYPYEPISS