AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene043162

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene043162.t1 MTR_4g033295 96.392 194 6 1 1 193 1 194 9.82e-139 387
MS.gene043162.t1 MTR_4g033295 96.089 179 6 1 1 178 1 179 3.86e-126 355
MS.gene043162.t1 MTR_4g033295 95.513 156 6 1 1 155 1 156 1.93e-107 307
MS.gene043162.t1 MTR_1g052470 67.416 89 27 1 103 189 282 370 8.24e-36 130
MS.gene043162.t1 MTR_4g065870 74.684 79 20 0 112 190 350 428 9.37e-36 131
MS.gene043162.t1 MTR_3g028520 68.132 91 27 1 105 193 308 398 4.33e-35 129
MS.gene043162.t1 MTR_3g027650 68.132 91 27 1 105 193 308 398 4.33e-35 129
MS.gene043162.t1 MTR_8g036235 67.045 88 27 1 105 190 302 389 5.41e-34 125
MS.gene043162.t1 MTR_2g098310 68.966 87 25 1 105 189 318 404 5.90e-33 123
MS.gene043162.t1 MTR_7g092540 64.368 87 29 1 105 189 229 315 1.99e-32 120
MS.gene043162.t1 MTR_1g116790 55.882 102 45 0 94 195 242 343 7.99e-32 119
MS.gene043162.t1 MTR_4g065870 82.090 67 12 0 112 178 350 416 1.59e-31 119
MS.gene043162.t1 MTR_3g027650 75.000 76 17 1 105 178 308 383 2.93e-31 119
MS.gene043162.t1 MTR_2g098310 72.152 79 20 1 105 181 318 396 1.36e-29 114
MS.gene043162.t1 MTR_7g092540 68.354 79 23 1 105 181 229 307 7.40e-29 110
MS.gene043162.t1 MTR_2g098310 49.180 122 25 2 105 189 318 439 3.12e-26 105
MS.gene043162.t1 MTR_3g027650 81.132 53 8 1 105 155 308 360 1.51e-21 92.0
MS.gene043162.t1 MTR_8g036235 77.358 53 10 1 105 155 302 354 6.43e-20 87.8
MS.gene043162.t1 MTR_4g065870 88.636 44 5 0 112 155 350 393 1.16e-19 87.0
MS.gene043162.t1 MTR_2g098310 77.358 53 10 1 105 155 318 370 6.25e-19 85.1
MS.gene043162.t1 MTR_4g131160 62.121 66 24 1 116 181 195 259 8.30e-19 84.7
MS.gene043162.t1 MTR_4g131160 62.121 66 24 1 116 181 198 262 8.36e-19 84.7
MS.gene043162.t1 MTR_3g498825 60.000 65 26 0 117 181 147 211 2.35e-17 79.7
MS.gene043162.t1 MTR_1g080890 43.434 99 52 2 116 214 192 286 3.45e-17 79.7
MS.gene043162.t1 MTR_1g017350 51.250 80 36 1 117 196 260 336 2.68e-16 77.4
MS.gene043162.t1 MTR_1g017350 51.250 80 36 1 117 196 260 336 2.70e-16 77.4
MS.gene043162.t1 MTR_1g017350 51.250 80 36 1 117 196 260 336 2.82e-16 77.4
MS.gene043162.t1 MTR_1g017350 51.250 80 36 1 117 196 260 336 2.88e-16 77.4
MS.gene043162.t1 MTR_8g099880 55.385 65 29 0 117 181 145 209 3.63e-15 73.6
MS.gene043162.t1 MTR_5g048860 56.923 65 28 0 117 181 365 429 3.87e-15 74.3
MS.gene043162.t1 MTR_8g065740 55.385 65 29 0 117 181 305 369 4.56e-15 73.9
MS.gene043162.t1 MTR_3g116770 55.385 65 29 0 117 181 191 255 6.61e-15 73.6
MS.gene043162.t1 MTR_3g116770 55.385 65 29 0 117 181 191 255 6.72e-15 73.2
MS.gene043162.t1 MTR_7g053410 55.385 65 29 0 117 181 317 381 8.66e-15 73.2
MS.gene043162.t1 MTR_7g053410 55.385 65 29 0 117 181 317 381 9.03e-15 73.2
MS.gene043162.t1 MTR_6g052280 72.727 44 12 0 112 155 49 92 1.02e-14 68.9
MS.gene043162.t1 MTR_8g012290 55.385 65 29 0 117 181 291 355 1.31e-14 72.8
MS.gene043162.t1 MTR_8g012290 55.385 65 29 0 117 181 291 355 1.37e-14 72.8
MS.gene043162.t1 MTR_4g070320 53.846 65 30 0 117 181 143 207 3.68e-14 70.9
MS.gene043162.t1 MTR_1g018090 57.576 66 27 1 116 181 273 337 1.18e-13 69.7
MS.gene043162.t1 MTR_8g062240 49.231 65 33 0 117 181 151 215 1.11e-12 66.2
MS.gene043162.t1 MTR_5g005110 46.667 90 42 3 92 181 204 287 1.55e-12 66.2
MS.gene043162.t1 MTR_5g037250 47.692 65 34 0 117 181 112 176 1.87e-12 65.1
MS.gene043162.t1 MTR_3g103030 53.030 66 30 1 116 181 228 292 2.02e-12 65.9
MS.gene043162.t1 MTR_7g092510 49.231 65 33 0 117 181 173 237 6.96e-12 64.3
MS.gene043162.t1 MTR_1g070870 62.121 66 24 1 116 181 119 183 1.57e-11 62.8
MS.gene043162.t1 MTR_1g070870 62.121 66 24 1 116 181 122 186 1.59e-11 62.8
MS.gene043162.t1 MTR_3g101810 48.611 72 36 1 112 183 166 236 2.15e-11 62.4
MS.gene043162.t1 MTR_1g059270 46.154 65 35 0 117 181 160 224 2.26e-11 62.0
MS.gene043162.t1 MTR_1g059270 46.154 65 35 0 117 181 160 224 3.42e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene043162.t1 AT1G35460 45.570 237 72 8 10 193 25 257 2.33e-49 162
MS.gene043162.t1 AT4G09180 46.392 194 71 5 9 193 90 259 2.79e-42 144
MS.gene043162.t1 AT1G51140 67.442 86 28 0 105 190 292 377 6.71e-36 130
MS.gene043162.t1 AT2G42280 74.074 81 21 0 109 189 271 351 5.85e-35 127
MS.gene043162.t1 AT2G43140 68.293 82 26 0 108 189 125 206 2.36e-33 120
MS.gene043162.t1 AT2G43140 68.293 82 26 0 108 189 222 303 7.38e-33 121
MS.gene043162.t1 AT1G05805 60.870 92 33 1 105 193 268 359 1.19e-31 119
MS.gene043162.t1 AT2G42280 80.000 70 14 0 109 178 271 340 3.52e-31 117
MS.gene043162.t1 AT1G35460 40.704 199 61 8 10 155 25 219 9.89e-28 105
MS.gene043162.t1 AT2G24260 63.636 66 23 1 116 181 34 98 1.12e-19 85.1
MS.gene043162.t1 AT2G24260 62.687 67 24 1 115 181 136 201 4.80e-19 84.7
MS.gene043162.t1 AT4G30980 62.121 66 24 1 116 181 129 193 8.28e-19 83.6
MS.gene043162.t1 AT4G30980 62.121 66 24 1 116 181 177 241 1.50e-18 83.6
MS.gene043162.t1 AT5G58010 59.091 66 26 1 116 181 98 162 2.91e-18 82.0
MS.gene043162.t1 AT4G34530 55.128 78 35 0 104 181 159 236 4.38e-17 79.3
MS.gene043162.t1 AT5G50915 58.462 65 27 0 117 181 136 200 2.56e-16 76.3
MS.gene043162.t1 AT5G50915 58.462 65 27 0 117 181 136 200 2.56e-16 76.3
MS.gene043162.t1 AT5G50915 58.462 65 27 0 117 181 136 200 3.76e-16 75.9
MS.gene043162.t1 AT5G50915 58.462 65 27 0 117 181 136 200 3.76e-16 75.9
MS.gene043162.t1 AT1G10120 51.250 80 36 1 117 196 206 282 8.98e-16 75.9
MS.gene043162.t1 AT1G10120 51.250 80 36 1 117 196 206 282 8.98e-16 75.9
MS.gene043162.t1 AT1G26260 52.632 76 34 1 106 181 192 265 1.83e-15 75.1
MS.gene043162.t1 AT1G26260 52.632 76 34 1 106 181 163 236 1.99e-15 74.7
MS.gene043162.t1 AT1G26260 52.632 76 34 1 106 181 214 287 2.15e-15 74.7
MS.gene043162.t1 AT1G26260 52.632 76 34 1 106 181 214 287 2.15e-15 74.7
MS.gene043162.t1 AT1G26260 52.632 76 34 1 106 181 214 287 2.15e-15 74.7
MS.gene043162.t1 AT1G26260 52.632 76 34 1 106 181 214 287 2.15e-15 74.7
MS.gene043162.t1 AT1G18400 53.846 65 30 0 117 181 145 209 5.98e-15 72.0
MS.gene043162.t1 AT1G68920 55.385 65 29 0 117 181 303 367 6.70e-15 73.6
MS.gene043162.t1 AT1G68920 55.385 65 29 0 117 181 303 367 6.70e-15 73.6
MS.gene043162.t1 AT1G68920 55.385 65 29 0 117 181 303 367 6.70e-15 73.6
MS.gene043162.t1 AT1G68920 55.385 65 29 0 117 181 302 366 6.89e-15 73.6
MS.gene043162.t1 AT1G18400 53.846 65 30 0 117 181 145 209 9.12e-15 72.0
MS.gene043162.t1 AT3G07340 55.385 65 29 0 117 181 258 322 1.21e-14 72.8
MS.gene043162.t1 AT3G07340 55.385 65 29 0 117 181 258 322 1.23e-14 72.8
MS.gene043162.t1 AT1G73830 53.846 65 30 0 117 181 147 211 1.68e-14 71.2
MS.gene043162.t1 AT1G73830 53.846 65 30 0 117 181 147 211 1.78e-14 70.9
MS.gene043162.t1 AT1G25330 55.385 65 29 0 117 181 104 168 3.45e-14 69.7
MS.gene043162.t1 AT2G18300 41.758 91 50 1 117 207 185 272 3.45e-14 70.9
MS.gene043162.t1 AT5G48560 53.846 65 30 0 117 181 301 365 4.51e-14 71.2
MS.gene043162.t1 AT5G48560 53.846 65 30 0 117 181 301 365 4.76e-14 71.2
MS.gene043162.t1 AT2G18300 42.529 87 47 1 117 203 185 268 9.66e-14 69.7
MS.gene043162.t1 AT5G43175 50.000 72 35 1 112 183 127 197 9.75e-14 68.6
MS.gene043162.t1 AT2G14760 57.576 66 27 1 116 181 236 300 1.15e-13 69.3
MS.gene043162.t1 AT4G33880 57.576 66 27 1 116 181 265 329 1.51e-13 69.3
MS.gene043162.t1 AT1G27740 52.857 70 32 1 112 181 162 230 1.67e-13 68.2
MS.gene043162.t1 AT2G18300 42.529 87 47 1 117 203 185 268 1.75e-13 69.3
MS.gene043162.t1 AT4G36540 41.304 92 50 1 117 204 141 232 2.42e-13 68.6
MS.gene043162.t1 AT2G42300 43.617 94 45 2 115 203 183 273 2.49e-13 68.2
MS.gene043162.t1 AT3G23690 52.308 65 31 0 117 181 191 255 2.71e-13 68.6
MS.gene043162.t1 AT4G36540 42.529 87 46 1 117 199 141 227 3.62e-13 67.8
MS.gene043162.t1 AT2G42300 50.746 67 33 0 115 181 183 249 5.35e-13 67.4
MS.gene043162.t1 AT3G57800 50.746 67 33 0 115 181 202 268 5.80e-13 67.8
MS.gene043162.t1 AT1G59640 49.231 65 33 0 117 181 136 200 1.59e-12 65.5
MS.gene043162.t1 AT1G59640 49.231 65 33 0 117 181 136 200 1.62e-12 66.2
MS.gene043162.t1 AT4G02590 58.571 70 28 1 112 181 78 146 3.36e-11 61.6
MS.gene043162.t1 AT4G02590 58.571 70 28 1 112 181 141 209 3.83e-11 62.0
MS.gene043162.t1 AT4G02590 58.571 70 28 1 112 181 141 209 3.83e-11 62.0
MS.gene043162.t1 AT1G03040 60.606 66 25 1 116 181 138 202 4.95e-11 61.6
MS.gene043162.t1 AT1G03040 60.606 66 25 1 116 181 143 207 5.29e-11 61.6
MS.gene043162.t1 AT5G62610 44.615 65 36 0 117 181 153 217 5.42e-11 61.6
MS.gene043162.t1 AT5G62610 44.615 65 36 0 117 181 153 217 5.42e-11 61.6
MS.gene043162.t1 AT1G03040 60.606 66 25 1 116 181 143 207 6.51e-11 61.6

Find 50 sgRNAs with CRISPR-Local

Find 254 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAGGGATGCAACCTGTTTC+TGG 0.121390 4.2:+71511624 None:intergenic
AGCTAAACCTTATCCATATT+TGG 0.165931 4.2:-71513345 None:intergenic
TCAAGAACTTGTGCCAAATA+TGG 0.285178 4.2:+71513332 MS.gene043162:CDS
TATAGCAATTGACCTTAAAA+TGG 0.344917 4.2:+71513075 MS.gene043162:CDS
CTCTACAACAAATACATGTT+GGG 0.348451 4.2:+71515445 MS.gene043162:CDS
GAGTAATAGTCAGATAAATA+TGG 0.359307 4.2:-71511831 None:intergenic
CCTGTTTCTGGCGGTGGTGG+TGG 0.423693 4.2:+71511636 MS.gene043162:CDS
ACTTGTGCCAAATATGGATA+AGG 0.429118 4.2:+71513338 MS.gene043162:CDS
ATTCCTCATGAAATTGATAA+TGG 0.436666 4.2:-71515473 None:intergenic
ACAAACTTCACTCTGAGTTA+TGG 0.449811 4.2:-71515413 None:intergenic
GTTGCTGCTGGCCATGGACC+TGG 0.453750 4.2:+71511786 MS.gene043162:CDS
ACTCTACAACAAATACATGT+TGG 0.455447 4.2:+71515444 MS.gene043162:CDS
TCCAAGGAGTATTGCTGAAA+GGG 0.458068 4.2:+71513159 MS.gene043162:CDS
ACCCTTTCAGCAATACTCCT+TGG 0.458639 4.2:-71513160 None:intergenic
CCACCACCACCGCCAGAAAC+AGG 0.468342 4.2:-71511636 None:intergenic
ATGCAACCTGTTTCTGGCGG+TGG 0.482597 4.2:+71511630 MS.gene043162:CDS
CAACCTGTTTCTGGCGGTGG+TGG 0.488753 4.2:+71511633 MS.gene043162:CDS
AATAACGTTGCTGCTGGCCA+TGG 0.502383 4.2:+71511780 MS.gene043162:CDS
TCTAATAATAACGTTGCTGC+TGG 0.510052 4.2:+71511774 MS.gene043162:CDS
GACTCAGGAGTTGAAGGGCC+AGG 0.517782 4.2:-71511804 None:intergenic
GAGTTGAAGGGCCAGGTCCA+TGG 0.518792 4.2:-71511797 None:intergenic
GATAAATATGGATGAGACTC+AGG 0.521953 4.2:-71511819 None:intergenic
GTTTCTACAGAATCAAATTG+AGG 0.522450 4.2:+71515165 MS.gene043162:CDS
GGATGAGACTCAGGAGTTGA+AGG 0.522930 4.2:-71511810 None:intergenic
TTAAAGGGACTTGAGGATAG+TGG 0.523749 4.2:+71513052 MS.gene043162:intron
TTGACAGATGTAGGAGTAAG+TGG 0.525544 4.2:-71511858 None:intergenic
CGCTTTGCTCGAATCTTACA+CGG 0.531001 4.2:-71513121 None:intergenic
TTAGCAACATTGACAGATGT+AGG 0.531316 4.2:-71511867 None:intergenic
AACGATTCGAACCAACTCGC+TGG 0.532231 4.2:-71511681 None:intergenic
AAGTAAAGTACCTGAGTGAA+AGG 0.536445 4.2:-71511894 None:intergenic
GCGGTGGTGGTGGTTTGACA+CGG 0.543618 4.2:+71511646 MS.gene043162:CDS
TCTAAGAACTCTATCTGAAG+TGG 0.547369 4.2:-71515496 None:intergenic
CGCAGAGATGTTAGATGAGG+CGG 0.558021 4.2:+71515129 MS.gene043162:CDS
ATCCAAGGAGTATTGCTGAA+AGG 0.558668 4.2:+71513158 MS.gene043162:CDS
TCTACAACAAATACATGTTG+GGG 0.569213 4.2:+71515446 MS.gene043162:CDS
GATGAGACTCAGGAGTTGAA+GGG 0.577896 4.2:-71511809 None:intergenic
TGCTAATAATCCTTTCACTC+AGG 0.579907 4.2:+71511884 MS.gene043162:CDS
TGTAAGATTCGAGCAAAGCG+TGG 0.594947 4.2:+71513124 MS.gene043162:CDS
TTAACTCAACTCCAGCGAGT+TGG 0.603459 4.2:+71511670 MS.gene043162:CDS
AACTATCAGAACAGCAAAGG+AGG 0.605279 4.2:+71515300 MS.gene043162:CDS
TGTGTGTTTAAAGGGACTTG+AGG 0.606958 4.2:+71513045 MS.gene043162:intron
TTGTTGTTATGTAGGTTCGG+AGG 0.614896 4.2:+71513280 MS.gene043162:intron
AGGAACTATCAGAACAGCAA+AGG 0.629143 4.2:+71515297 MS.gene043162:intron
GTGGATTTGCTACTCATCCA+AGG 0.634120 4.2:+71513143 MS.gene043162:CDS
GGGATGCAACCTGTTTCTGG+CGG 0.639831 4.2:+71511627 None:intergenic
GTGCCATTATCAATTTCATG+AGG 0.641751 4.2:+71515470 MS.gene043162:CDS
CTACAACAAATACATGTTGG+GGG 0.652944 4.2:+71515447 MS.gene043162:CDS
TACCGCAGAGATGTTAGATG+AGG 0.658172 4.2:+71515126 MS.gene043162:CDS
TACAACAAATACATGTTGGG+GGG 0.663265 4.2:+71515448 MS.gene043162:CDS
CGCCTCATCTAACATCTCTG+CGG 0.686528 4.2:-71515128 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAAAATATCAATCAATTT+AGG + chr4.2:71512643-71512662 MS.gene043162:intron 15.0%
!! ATAGATAAATCAAGTAAATA+CGG - chr4.2:71511945-71511964 None:intergenic 15.0%
!! ATCTATATAATATACTGATA+TGG + chr4.2:71512868-71512887 MS.gene043162:intron 15.0%
!! TTGTTTAATATAAAATTCTG+AGG - chr4.2:71513904-71513923 None:intergenic 15.0%
!!! AAATAGAACATTTAAAATAG+TGG - chr4.2:71512687-71512706 None:intergenic 15.0%
!!! AAATTTAGAAAGTACTAATT+GGG + chr4.2:71513737-71513756 MS.gene043162:intron 15.0%
!!! CTTTTGAATTATCATATTTT+TGG + chr4.2:71515372-71515391 MS.gene043162:intron 15.0%
!!! TAATTTGTTTAATCCAAATT+GGG + chr4.2:71513232-71513251 MS.gene043162:intron 15.0%
!!! TTGATATTTTGTTAAGTTAA+TGG - chr4.2:71512636-71512655 None:intergenic 15.0%
!! AATTATTGACATAATGACAT+TGG + chr4.2:71513704-71513723 MS.gene043162:intron 20.0%
!! AGATAAATCTTTCTCATATT+TGG + chr4.2:71514447-71514466 MS.gene043162:intron 20.0%
!! ATATTAACATGTGATTTGAT+TGG + chr4.2:71512300-71512319 MS.gene043162:intron 20.0%
!! ATTCTTTAGATTATAAGTGT+TGG + chr4.2:71512567-71512586 MS.gene043162:intron 20.0%
!! CATATTGCTAATACTAATTT+GGG + chr4.2:71513199-71513218 MS.gene043162:intron 20.0%
!! CATGTAATAAAAGAAAAGAA+AGG - chr4.2:71513510-71513529 None:intergenic 20.0%
!! GATAAATCTTTCTCATATTT+GGG + chr4.2:71514448-71514467 MS.gene043162:intron 20.0%
!! TATATAATATACTGATATGG+AGG + chr4.2:71512871-71512890 MS.gene043162:intron 20.0%
!! TATCAAAAATCATAAATGTG+AGG + chr4.2:71514246-71514265 MS.gene043162:intron 20.0%
!! TCATATTGCTAATACTAATT+TGG + chr4.2:71513198-71513217 MS.gene043162:intron 20.0%
!! TTCAATGTAATTATATGTGT+CGG - chr4.2:71512065-71512084 None:intergenic 20.0%
!! TTGATATTTCTCAATCATTA+AGG - chr4.2:71514232-71514251 None:intergenic 20.0%
!!! AAAATGGACAAAATTTTAGA+GGG + chr4.2:71513091-71513110 MS.gene043162:CDS 20.0%
!!! AACATAGTTTTACAACTTTT+AGG + chr4.2:71512495-71512514 MS.gene043162:intron 20.0%
!!! AATTTAGAAAGTACTAATTG+GGG + chr4.2:71513738-71513757 MS.gene043162:intron 20.0%
!!! ACCTGAATAAAAAGTATAAA+AGG - chr4.2:71514160-71514179 None:intergenic 20.0%
!!! CAAATTTAGAAAGTACTAAT+TGG + chr4.2:71513736-71513755 MS.gene043162:intron 20.0%
!!! CCTGAATAAAAAGTATAAAA+GGG - chr4.2:71514159-71514178 None:intergenic 20.0%
!!! CTAAAATTTTGTCCATTTTA+AGG - chr4.2:71513090-71513109 None:intergenic 20.0%
!!! CTGAATAAAAAGTATAAAAG+GGG - chr4.2:71514158-71514177 None:intergenic 20.0%
!!! GAGAATGATATATTTTTTTC+TGG + chr4.2:71514487-71514506 MS.gene043162:intron 20.0%
!!! GTAACTATATGAATATCTTT+TGG - chr4.2:71512825-71512844 None:intergenic 20.0%
!!! GTAATTTGTTTAATCCAAAT+TGG + chr4.2:71513231-71513250 MS.gene043162:intron 20.0%
!!! TAAAATGGACAAAATTTTAG+AGG + chr4.2:71513090-71513109 MS.gene043162:CDS 20.0%
!!! TTTTGTTCTTATTCCTTATT+GGG + chr4.2:71512984-71513003 MS.gene043162:intron 20.0%
!!! TTTTTGTTCTTATTCCTTAT+TGG + chr4.2:71512983-71513002 MS.gene043162:intron 20.0%
! AAAAGTCCAAATATGTTGTT+TGG - chr4.2:71514302-71514321 None:intergenic 25.0%
! AACTTCAAATTCAAAGAGAA+AGG - chr4.2:71513684-71513703 None:intergenic 25.0%
! AAGATACAAAGCATAATGTA+TGG - chr4.2:71513449-71513468 None:intergenic 25.0%
! ACCATAACATGTTTGTTTAA+TGG + chr4.2:71513382-71513401 MS.gene043162:intron 25.0%
! ACCATTAAACAAACATGTTA+TGG - chr4.2:71513386-71513405 None:intergenic 25.0%
! ACTTCAAATTCAAAGAGAAA+GGG - chr4.2:71513683-71513702 None:intergenic 25.0%
! ACTTGAACAAAATCATTTCT+TGG - chr4.2:71513417-71513436 None:intergenic 25.0%
! ATCAAAATATAGGAAAGGAT+AGG + chr4.2:71514822-71514841 MS.gene043162:intron 25.0%
! ATCTAATACATTCAAGTCTT+AGG + chr4.2:71512395-71512414 MS.gene043162:intron 25.0%
! ATTAAACAAACATGTTATGG+TGG - chr4.2:71513383-71513402 None:intergenic 25.0%
! ATTCCTCATGAAATTGATAA+TGG - chr4.2:71515476-71515495 None:intergenic 25.0%
! CATTTATTAAATGGCAAACA+GGG - chr4.2:71512155-71512174 None:intergenic 25.0%
! CTAAATTTATGCTTGTCATT+TGG + chr4.2:71515205-71515224 MS.gene043162:intron 25.0%
! GAGTAATAGTCAGATAAATA+TGG - chr4.2:71511834-71511853 None:intergenic 25.0%
! GCATTTCTCTATCAAAATAT+AGG + chr4.2:71514812-71514831 MS.gene043162:intron 25.0%
! TACAAGAACAAAAGAAACTT+AGG - chr4.2:71515097-71515116 None:intergenic 25.0%
! TACTCAAAACTAGTAAAGTT+GGG + chr4.2:71513788-71513807 MS.gene043162:intron 25.0%
! TACTTAGTGAACAAATACTT+TGG + chr4.2:71512960-71512979 MS.gene043162:intron 25.0%
! TACTTTATTATTGTTCAGTC+CGG + chr4.2:71511916-71511935 MS.gene043162:intron 25.0%
! TATAGCAATTGACCTTAAAA+TGG + chr4.2:71513075-71513094 MS.gene043162:CDS 25.0%
! TCAAAATATAGGAAAGGATA+GGG + chr4.2:71514823-71514842 MS.gene043162:intron 25.0%
! TCTCAAATTATTAACGATGT+CGG + chr4.2:71512096-71512115 MS.gene043162:intron 25.0%
! TCTCTATCAAAATATAGGAA+AGG + chr4.2:71514817-71514836 MS.gene043162:intron 25.0%
! TCTGTATTTGTGTGTTTAAA+GGG + chr4.2:71513037-71513056 MS.gene043162:intron 25.0%
! TTACTCAAAACTAGTAAAGT+TGG + chr4.2:71513787-71513806 MS.gene043162:intron 25.0%
! TTCAAAAGAGAATATGCAAA+CGG - chr4.2:71515360-71515379 None:intergenic 25.0%
! TTCTGTATTTGTGTGTTTAA+AGG + chr4.2:71513036-71513055 MS.gene043162:intron 25.0%
!! AAAGTCCAAATATGTTGTTT+GGG - chr4.2:71514301-71514320 None:intergenic 25.0%
!! AACAACATATTTGGACTTTT+TGG + chr4.2:71514302-71514321 MS.gene043162:intron 25.0%
!! CTGTTTGCCATTTAATAAAT+GGG + chr4.2:71512154-71512173 MS.gene043162:intron 25.0%
!! CTTTTCTTTTATTACATGTG+AGG + chr4.2:71513512-71513531 MS.gene043162:intron 25.0%
!! TAGTTGAATTTTTCCCAATA+AGG - chr4.2:71513000-71513019 None:intergenic 25.0%
!! TGTTTGCCATTTAATAAATG+GGG + chr4.2:71512155-71512174 MS.gene043162:intron 25.0%
!! TTCATTTTCTCTCTTAATTG+TGG + chr4.2:71515069-71515088 MS.gene043162:intron 25.0%
!! TTTGAGTAAAGGAACTTTTA+AGG - chr4.2:71513776-71513795 None:intergenic 25.0%
!! TTTTTCCCAAACAACATATT+TGG + chr4.2:71514293-71514312 MS.gene043162:intron 25.0%
!!! ACTATTAATCTCTTTTTTGG+CGG + chr4.2:71514710-71514729 MS.gene043162:intron 25.0%
!!! ACTTTACTAGTTTTGAGTAA+AGG - chr4.2:71513787-71513806 None:intergenic 25.0%
!!! CCCTTTTATACTTTTTATTC+AGG + chr4.2:71514156-71514175 MS.gene043162:intron 25.0%
!!! GACACTATTAATCTCTTTTT+TGG + chr4.2:71514707-71514726 MS.gene043162:intron 25.0%
AACGGAATTATGCATTTACT+CGG - chr4.2:71515342-71515361 None:intergenic 30.0%
AATCAAGTAAATACGGATTC+CGG - chr4.2:71511938-71511957 None:intergenic 30.0%
ACACCTTAGAATCACTTATA+AGG + chr4.2:71512786-71512805 MS.gene043162:intron 30.0%
ACTCTACAACAAATACATGT+TGG + chr4.2:71515444-71515463 MS.gene043162:CDS 30.0%
AGCTAAACCTTATCCATATT+TGG - chr4.2:71513348-71513367 None:intergenic 30.0%
CAACTTAACTACAAATCCTT+AGG + chr4.2:71514125-71514144 MS.gene043162:intron 30.0%
CCATTTATTAAATGGCAAAC+AGG - chr4.2:71512156-71512175 None:intergenic 30.0%
CTAAGGATTTGTAGTTAAGT+TGG - chr4.2:71514127-71514146 None:intergenic 30.0%
CTCTACAACAAATACATGTT+GGG + chr4.2:71515445-71515464 MS.gene043162:CDS 30.0%
GAGTATAACTGAACATATTG+AGG + chr4.2:71512915-71512934 MS.gene043162:intron 30.0%
GCCATGATTTATTAAGCTAT+CGG + chr4.2:71512465-71512484 MS.gene043162:intron 30.0%
GTTTCTACAGAATCAAATTG+AGG + chr4.2:71515165-71515184 MS.gene043162:CDS 30.0%
TAAAAGGGGATTAAAACCTA+AGG - chr4.2:71514144-71514163 None:intergenic 30.0%
TAAATTCAGTGCATACATTC+TGG - chr4.2:71514101-71514120 None:intergenic 30.0%
TCTACAACAAATACATGTTG+GGG + chr4.2:71515446-71515465 MS.gene043162:CDS 30.0%
TGACCAATTCTGTTATAAGT+GGG + chr4.2:71514887-71514906 MS.gene043162:intron 30.0%
TGCATGAATTGATACATTAC+AGG + chr4.2:71515277-71515296 MS.gene043162:intron 30.0%
TTTGGAAGGTGAGAAATATA+GGG + chr4.2:71514418-71514437 MS.gene043162:intron 30.0%
! ACATATTTGGACTTTTTGGA+AGG + chr4.2:71514306-71514325 MS.gene043162:intron 30.0%
! CCTGTTTGCCATTTAATAAA+TGG + chr4.2:71512153-71512172 MS.gene043162:intron 30.0%
! TATGCTTGTCATTTGGTATT+CGG + chr4.2:71515212-71515231 MS.gene043162:intron 30.0%
! TGACATAATGACATTGGTTA+AGG + chr4.2:71513710-71513729 MS.gene043162:intron 30.0%
!! AAAATTCTGAGGTTCAAATC+TGG - chr4.2:71513893-71513912 None:intergenic 30.0%
!! TACAATCTTAGGCTTTGTTT+GGG + chr4.2:71514368-71514387 MS.gene043162:intron 30.0%
!! TGAGTTTCTTGTTGTTATGT+AGG + chr4.2:71513272-71513291 MS.gene043162:intron 30.0%
!! TTCTTGTTGTTATGTAGGTT+CGG + chr4.2:71513277-71513296 MS.gene043162:intron 30.0%
!!! GGTTTTGAGTGAAATTTACT+TGG + chr4.2:71513533-71513552 MS.gene043162:intron 30.0%
AAACTGAGACATATCAGACA+AGG - chr4.2:71514275-71514294 None:intergenic 35.0%
AAAGAGAAAGGGTAGTTAAG+TGG - chr4.2:71513672-71513691 None:intergenic 35.0%
ACAAACTTCACTCTGAGTTA+TGG - chr4.2:71515416-71515435 None:intergenic 35.0%
ACGGAATTATGCATTTACTC+GGG - chr4.2:71515341-71515360 None:intergenic 35.0%
ACTTGTGCCAAATATGGATA+AGG + chr4.2:71513338-71513357 MS.gene043162:CDS 35.0%
ATGCAACCATACAAGTGAAT+TGG - chr4.2:71512435-71512454 None:intergenic 35.0%
CAGAAAAAGTTCACCCAATT+TGG - chr4.2:71513248-71513267 None:intergenic 35.0%
CATTAAGGTTACTGCAAAAG+TGG - chr4.2:71514217-71514236 None:intergenic 35.0%
CCTCCTTATAAGTGATTCTA+AGG - chr4.2:71512792-71512811 None:intergenic 35.0%
CCTTAGAATCACTTATAAGG+AGG + chr4.2:71512789-71512808 MS.gene043162:intron 35.0%
CTACAACAAATACATGTTGG+GGG + chr4.2:71515447-71515466 MS.gene043162:CDS 35.0%
GATAAATATGGATGAGACTC+AGG - chr4.2:71511822-71511841 None:intergenic 35.0%
GCAAGACCCCATTTATTAAA+TGG - chr4.2:71512164-71512183 None:intergenic 35.0%
GCCGATAGCTTAATAAATCA+TGG - chr4.2:71512469-71512488 None:intergenic 35.0%
GTAAGTTATGCTGTTCAATG+TGG + chr4.2:71514509-71514528 MS.gene043162:intron 35.0%
GTGACCAATTCTGTTATAAG+TGG + chr4.2:71514886-71514905 MS.gene043162:intron 35.0%
TACAACAAATACATGTTGGG+GGG + chr4.2:71515448-71515467 MS.gene043162:CDS 35.0%
TAGGTAGCCAATTTACCATT+GGG - chr4.2:71514569-71514588 None:intergenic 35.0%
TATGAAGTATGAACACTCCT+CGG + chr4.2:71511998-71512017 MS.gene043162:intron 35.0%
TCAAGAACTTGTGCCAAATA+TGG + chr4.2:71513332-71513351 MS.gene043162:CDS 35.0%
TCAAGTCTTAGGTAAAGTTG+TGG + chr4.2:71512406-71512425 MS.gene043162:intron 35.0%
TCTAAGAACTCTATCTGAAG+TGG - chr4.2:71515499-71515518 None:intergenic 35.0%
TCTAATAATAACGTTGCTGC+TGG + chr4.2:71511774-71511793 MS.gene043162:CDS 35.0%
TCTCCCACTTATAACAGAAT+TGG - chr4.2:71514893-71514912 None:intergenic 35.0%
TGAACTGTCTGATTCTGATT+GGG + chr4.2:71513946-71513965 MS.gene043162:intron 35.0%
TGCTAATAATCCTTTCACTC+AGG + chr4.2:71511884-71511903 MS.gene043162:CDS 35.0%
TTAGCAACATTGACAGATGT+AGG - chr4.2:71511870-71511889 None:intergenic 35.0%
TTCTGTTATAAGTGGGAGAA+CGG + chr4.2:71514894-71514913 MS.gene043162:intron 35.0%
TTGGAAGGTGAGAAATATAG+GGG + chr4.2:71514419-71514438 MS.gene043162:intron 35.0%
TTTGCAGTTAGTAACCGTTT+GGG + chr4.2:71514946-71514965 MS.gene043162:intron 35.0%
! AAGTAAAGTACCTGAGTGAA+AGG - chr4.2:71511897-71511916 None:intergenic 35.0%
! CGTGTGTTGTGTTTTATGAT+CGG + chr4.2:71513595-71513614 MS.gene043162:intron 35.0%
! CTTTGGAAGGTGAGAAATAT+AGG + chr4.2:71514417-71514436 MS.gene043162:intron 35.0%
! GCATACATTCTGGCATTTTT+CGG - chr4.2:71514091-71514110 None:intergenic 35.0%
! GTGCCATTATCAATTTCATG+AGG + chr4.2:71515470-71515489 MS.gene043162:CDS 35.0%
! GTGTTATTATAGTGACATGG+AGG + chr4.2:71512893-71512912 MS.gene043162:intron 35.0%
! TTTTCAACTACACAGAAACC+TGG - chr4.2:71513815-71513834 None:intergenic 35.0%
! TTTTGCAGTTAGTAACCGTT+TGG + chr4.2:71514945-71514964 MS.gene043162:intron 35.0%
!! CTACAATCTTAGGCTTTGTT+TGG + chr4.2:71514367-71514386 MS.gene043162:intron 35.0%
!! GAGGTGTTATTATAGTGACA+TGG + chr4.2:71512890-71512909 MS.gene043162:intron 35.0%
AAACTAGTAAAGTTGGGACC+AGG + chr4.2:71513794-71513813 MS.gene043162:intron 40.0%
AACTATCAGAACAGCAAAGG+AGG + chr4.2:71515300-71515319 MS.gene043162:CDS 40.0%
AATACTAGACGGAAAGTGAG+AGG + chr4.2:71512364-71512383 MS.gene043162:intron 40.0%
ACACAACACATGTCTGATAC+CGG - chr4.2:71512036-71512055 None:intergenic 40.0%
AGGAACTATCAGAACAGCAA+AGG + chr4.2:71515297-71515316 MS.gene043162:intron 40.0%
AGGATCTCAAATGAGAACGT+AGG + chr4.2:71514543-71514562 MS.gene043162:intron 40.0%
AGGGAATAATATGACGTGGT+AGG + chr4.2:71514842-71514861 MS.gene043162:intron 40.0%
CAATATCAACTTGGCGGAAT+TGG - chr4.2:71514018-71514037 None:intergenic 40.0%
CACACACAATATCAACTTGG+CGG - chr4.2:71514024-71514043 None:intergenic 40.0%
CTAGGTAGCCAATTTACCAT+TGG - chr4.2:71514570-71514589 None:intergenic 40.0%
CTCACTTTCCGTCTAGTATT+GGG - chr4.2:71512364-71512383 None:intergenic 40.0%
CTCCACACACAATATCAACT+TGG - chr4.2:71514027-71514046 None:intergenic 40.0%
CTGAACTGTCTGATTCTGAT+TGG + chr4.2:71513945-71513964 MS.gene043162:intron 40.0%
GGATAGGGAATAATATGACG+TGG + chr4.2:71514838-71514857 MS.gene043162:intron 40.0%
GGGAATAATATGACGTGGTA+GGG + chr4.2:71514843-71514862 MS.gene043162:intron 40.0%
GTTAGAAGCCCAATACTAGA+CGG + chr4.2:71512353-71512372 MS.gene043162:intron 40.0%
TAACATCACTCTCCACCTAA+TGG - chr4.2:71514603-71514622 None:intergenic 40.0%
TCTCACTTTCCGTCTAGTAT+TGG - chr4.2:71512365-71512384 None:intergenic 40.0%
TCTGTTATAAGTGGGAGAAC+GGG + chr4.2:71514895-71514914 MS.gene043162:intron 40.0%
TGGTGTCCAATTCACTTGTA+TGG + chr4.2:71512426-71512445 MS.gene043162:intron 40.0%
TGTGTGTTTAAAGGGACTTG+AGG + chr4.2:71513045-71513064 MS.gene043162:intron 40.0%
TTAAAGGGACTTGAGGATAG+TGG + chr4.2:71513052-71513071 MS.gene043162:intron 40.0%
TTGACAGATGTAGGAGTAAG+TGG - chr4.2:71511861-71511880 None:intergenic 40.0%
! AGTTAGTAACCGTTTGGGTT+GGG + chr4.2:71514951-71514970 MS.gene043162:intron 40.0%
! AGTTGATATTGTGTGTGGAG+TGG + chr4.2:71514027-71514046 MS.gene043162:intron 40.0%
! CATTTGATCTGGGATTACAC+GGG + chr4.2:71515004-71515023 MS.gene043162:intron 40.0%
! GCATTTGATCTGGGATTACA+CGG + chr4.2:71515003-71515022 MS.gene043162:intron 40.0%
! GTATGGTTGCATCTGAGTTT+TGG + chr4.2:71512443-71512462 MS.gene043162:intron 40.0%
! TTGTTGTTATGTAGGTTCGG+AGG + chr4.2:71513280-71513299 MS.gene043162:intron 40.0%
!! ATCCAAGGAGTATTGCTGAA+AGG + chr4.2:71513158-71513177 MS.gene043162:CDS 40.0%
!! TCCAAGGAGTATTGCTGAAA+GGG + chr4.2:71513159-71513178 MS.gene043162:CDS 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG + chr4.2:71514375-71514394 MS.gene043162:intron 40.0%
!!! CTCTTTTTTGGCGGAATTCA+CGG + chr4.2:71514719-71514738 MS.gene043162:intron 40.0%
!!! TCTTTTTTGGCGGAATTCAC+GGG + chr4.2:71514720-71514739 MS.gene043162:intron 40.0%
AAATGAGAACGTAGGCCCAA+TGG + chr4.2:71514551-71514570 MS.gene043162:intron 45.0%
ACCCTTTCAGCAATACTCCT+TGG - chr4.2:71513163-71513182 None:intergenic 45.0%
ACGTAGGCCCAATGGTAAAT+TGG + chr4.2:71514559-71514578 MS.gene043162:intron 45.0%
ACTGTCTGATTCTGATTGGG+CGG + chr4.2:71513949-71513968 MS.gene043162:intron 45.0%
AGGTTCAAATCTGGACCATG+TGG - chr4.2:71513884-71513903 None:intergenic 45.0%
AGTGTTTCATCTCTTCTGCG+AGG + chr4.2:71514979-71514998 MS.gene043162:intron 45.0%
AGTTGCACAAGTCCATTAGG+TGG + chr4.2:71514588-71514607 MS.gene043162:intron 45.0%
ATGGTAAACACAGACACGCT+TGG + chr4.2:71514343-71514362 MS.gene043162:intron 45.0%
ATTCGACACACCAACAACAC+AGG - chr4.2:71512329-71512348 None:intergenic 45.0%
ATTCTGATTGGGCGGTTCTA+AGG + chr4.2:71513957-71513976 MS.gene043162:intron 45.0%
CAACTTGGCGGAATTGGATT+AGG - chr4.2:71514012-71514031 None:intergenic 45.0%
CACAACACATGTCTGATACC+GGG - chr4.2:71512035-71512054 None:intergenic 45.0%
CACGCTTGGACTACAATCTT+AGG + chr4.2:71514357-71514376 MS.gene043162:intron 45.0%
CAGTTAGTAACCGTTTGGGT+TGG + chr4.2:71514950-71514969 MS.gene043162:intron 45.0%
CCTAGTTGCACAAGTCCATT+AGG + chr4.2:71514585-71514604 MS.gene043162:intron 45.0%
CGCTTTGCTCGAATCTTACA+CGG - chr4.2:71513124-71513143 None:intergenic 45.0%
CGTGTCTGTGTTTACCATAG+AGG - chr4.2:71514341-71514360 None:intergenic 45.0%
GAAGGTGAAGTCTTCCTCTA+TGG + chr4.2:71514324-71514343 MS.gene043162:intron 45.0%
GATGAGACTCAGGAGTTGAA+GGG - chr4.2:71511812-71511831 None:intergenic 45.0%
GTATGAACACTCCTCGGATT+AGG + chr4.2:71512004-71512023 MS.gene043162:intron 45.0%
GTCTCACAACACGGACAATA+CGG - chr4.2:71512133-71512152 None:intergenic 45.0%
TACCGCAGAGATGTTAGATG+AGG + chr4.2:71515126-71515145 MS.gene043162:CDS 45.0%
TCAATGTGGCAGTGTCTGTT+AGG + chr4.2:71514523-71514542 MS.gene043162:intron 45.0%
TGATTGGATGCCTGTGTTGT+TGG + chr4.2:71512316-71512335 MS.gene043162:intron 45.0%
TGTAAGATTCGAGCAAAGCG+TGG + chr4.2:71513124-71513143 MS.gene043162:CDS 45.0%
TTAACTCAACTCCAGCGAGT+TGG + chr4.2:71511670-71511689 MS.gene043162:CDS 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + chr4.2:71514380-71514399 MS.gene043162:intron 45.0%
!! CCTAATGGACTTGTGCAACT+AGG - chr4.2:71514588-71514607 None:intergenic 45.0%
!! CGCCAAGTTGATATTGTGTG+TGG + chr4.2:71514022-71514041 MS.gene043162:intron 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + chr4.2:71514379-71514398 MS.gene043162:intron 45.0%
!! GTGGATTTGCTACTCATCCA+AGG + chr4.2:71513143-71513162 MS.gene043162:CDS 45.0%
AACGATTCGAACCAACTCGC+TGG - chr4.2:71511684-71511703 None:intergenic 50.0%
AATAACGTTGCTGCTGGCCA+TGG + chr4.2:71511780-71511799 MS.gene043162:CDS 50.0%
CGCAGAGATGTTAGATGAGG+CGG + chr4.2:71515129-71515148 MS.gene043162:CDS 50.0%
CGCCTCATCTAACATCTCTG+CGG - chr4.2:71515131-71515150 None:intergenic 50.0%
GCAAACAGGGTCTCACAACA+CGG - chr4.2:71512142-71512161 None:intergenic 50.0%
GGATGAGACTCAGGAGTTGA+AGG - chr4.2:71511813-71511832 None:intergenic 50.0%
! ACCATGTGGTCTTGATCGGA+CGG - chr4.2:71513870-71513889 None:intergenic 50.0%
! CTGGACCATGTGGTCTTGAT+CGG - chr4.2:71513874-71513893 None:intergenic 50.0%
! GGCTTAGTGGGTGTAAAGAG+CGG + chr4.2:71514741-71514760 MS.gene043162:intron 50.0%
! TTAGTGGGTGTAAAGAGCGG+TGG + chr4.2:71514744-71514763 MS.gene043162:intron 50.0%
!! CTGCGAGGAGCATTTGATCT+GGG + chr4.2:71514994-71515013 MS.gene043162:intron 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + chr4.2:71514378-71514397 MS.gene043162:intron 50.0%
!! TCTGCGAGGAGCATTTGATC+TGG + chr4.2:71514993-71515012 MS.gene043162:intron 50.0%
AAGTGGGAGAACGGGAGAGA+GGG + chr4.2:71514903-71514922 MS.gene043162:intron 55.0%
ATATGACGTGGTAGGGAGCG+AGG + chr4.2:71514850-71514869 MS.gene043162:intron 55.0%
CACTCTCTGCCCAACCCAAA+CGG - chr4.2:71514963-71514982 None:intergenic 55.0%
CAGTGCAGTCAGCATGCTCA+AGG + chr4.2:71513844-71513863 MS.gene043162:intron 55.0%
GCGGAATTCACGGGCTTAGT+GGG + chr4.2:71514729-71514748 MS.gene043162:intron 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG + chr4.2:71514384-71514403 MS.gene043162:intron 55.0%
TAAGTGGGAGAACGGGAGAG+AGG + chr4.2:71514902-71514921 MS.gene043162:intron 55.0%
TATGACGTGGTAGGGAGCGA+GGG + chr4.2:71514851-71514870 MS.gene043162:intron 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG + chr4.2:71514383-71514402 MS.gene043162:intron 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG + chr4.2:71514385-71514404 MS.gene043162:intron 55.0%
!! ATGCAACCTGTTTCTGGCGG+TGG + chr4.2:71511630-71511649 MS.gene043162:CDS 55.0%
AACGGGAGAGAGGGAAGGGA+GGG + chr4.2:71514912-71514931 MS.gene043162:intron 60.0%
AGGGAGCGAGGGTGAGCAAA+TGG + chr4.2:71514862-71514881 MS.gene043162:intron 60.0%
GACTCAGGAGTTGAAGGGCC+AGG - chr4.2:71511807-71511826 None:intergenic 60.0%
GAGTTGAAGGGCCAGGTCCA+TGG - chr4.2:71511800-71511819 None:intergenic 60.0%
GAGTTTGGAGGGGAGGGGAA+GGG + chr4.2:71514390-71514409 MS.gene043162:intron 60.0%
GCCGTCCGATCAAGACCACA+TGG + chr4.2:71513866-71513885 MS.gene043162:intron 60.0%
GGAGAACGGGAGAGAGGGAA+GGG + chr4.2:71514908-71514927 MS.gene043162:intron 60.0%
GGCGGAATTCACGGGCTTAG+TGG + chr4.2:71514728-71514747 MS.gene043162:intron 60.0%
! AGAGAGGGAAGGGAGGGCAT+TGG + chr4.2:71514918-71514937 MS.gene043162:intron 60.0%
! TCCTCGGATTAGGCGTGTCC+CGG + chr4.2:71512014-71512033 MS.gene043162:intron 60.0%
!! CAACCTGTTTCTGGCGGTGG+TGG + chr4.2:71511633-71511652 MS.gene043162:CDS 60.0%
!! GCGGTGGTGGTGGTTTGACA+CGG + chr4.2:71511646-71511665 MS.gene043162:CDS 60.0%
ACCGGGACACGCCTAATCCG+AGG - chr4.2:71512018-71512037 None:intergenic 65.0%
CCACCACCACCGCCAGAAAC+AGG - chr4.2:71511639-71511658 None:intergenic 65.0%
GAACGGGAGAGAGGGAAGGG+AGG + chr4.2:71514911-71514930 MS.gene043162:intron 65.0%
GGAGTTTGGAGGGGAGGGGA+AGG + chr4.2:71514389-71514408 MS.gene043162:intron 65.0%
GGGAGAACGGGAGAGAGGGA+AGG + chr4.2:71514907-71514926 MS.gene043162:intron 65.0%
GTTGCTGCTGGCCATGGACC+TGG + chr4.2:71511786-71511805 MS.gene043162:CDS 65.0%
TTGGAGGGGAGGGGAAGGGA+GGG + chr4.2:71514394-71514413 MS.gene043162:intron 65.0%
TTTGGAGGGGAGGGGAAGGG+AGG + chr4.2:71514393-71514412 MS.gene043162:intron 65.0%
!! CCTGTTTCTGGCGGTGGTGG+TGG + chr4.2:71511636-71511655 MS.gene043162:CDS 65.0%
!! GGGGAAGGGAGGGCTTTGGA+AGG + chr4.2:71514404-71514423 MS.gene043162:intron 65.0%
GGGAGGGGAAGGGAGGGCTT+TGG + chr4.2:71514400-71514419 MS.gene043162:intron 70.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 71511630 71515531 71511630 ID=MS.gene043162
chr4.2 mRNA 71511630 71515531 71511630 ID=MS.gene043162.t1;Parent=MS.gene043162
chr4.2 exon 71511630 71511905 71511630 ID=MS.gene043162.t1.exon1;Parent=MS.gene043162.t1
chr4.2 CDS 71511630 71511905 71511630 ID=cds.MS.gene043162.t1;Parent=MS.gene043162.t1
chr4.2 exon 71513058 71513180 71513058 ID=MS.gene043162.t1.exon2;Parent=MS.gene043162.t1
chr4.2 CDS 71513058 71513180 71513058 ID=cds.MS.gene043162.t1;Parent=MS.gene043162.t1
chr4.2 exon 71513294 71513359 71513294 ID=MS.gene043162.t1.exon3;Parent=MS.gene043162.t1
chr4.2 CDS 71513294 71513359 71513294 ID=cds.MS.gene043162.t1;Parent=MS.gene043162.t1
chr4.2 exon 71515118 71515186 71515118 ID=MS.gene043162.t1.exon4;Parent=MS.gene043162.t1
chr4.2 CDS 71515118 71515186 71515118 ID=cds.MS.gene043162.t1;Parent=MS.gene043162.t1
chr4.2 exon 71515299 71515342 71515299 ID=MS.gene043162.t1.exon5;Parent=MS.gene043162.t1
chr4.2 CDS 71515299 71515342 71515299 ID=cds.MS.gene043162.t1;Parent=MS.gene043162.t1
chr4.2 exon 71515408 71515531 71515408 ID=MS.gene043162.t1.exon6;Parent=MS.gene043162.t1
chr4.2 CDS 71515408 71515531 71515408 ID=cds.MS.gene043162.t1;Parent=MS.gene043162.t1
Gene Sequence

>MS.gene043162

ATGCAACCTGTTTCTGGCGGTGGTGGTGGTTTGACACGGTTTAACTCAACTCCAGCGAGTTGGTTCGAATCGTTTATTCTTAAAGAAGAAGATGAAGTTGATGAAAGACAACAAGATCATAACTTAAGTTTTACTCAACTGCTTTCTAATAATAACGTTGCTGCTGGCCATGGACCTGGCCCTTCAACTCCTGAGTCTCATCCATATTTATCTGACTATTACTCTTCACCACTTACTCCTACATCTGTCAATGTTGCTAATAATCCTTTCACTCAGGTACTTTACTTACTTTATTATTGTTCAGTCCGGAATCCGTATTTACTTGATTTATCTATCTTTATTTACTCTTCATTTATGAGAGATAGACATATGAAGTATGAACACTCCTCGGATTAGGCGTGTCCCGGTATCAGACATGTGTTGTGTCTAACACCGACACATATAATTACATTGAATTATTTGATTTTCTCAAATTATTAACGATGTCGGCGTGTCAATGTCCGTATTGTCCGTGTTGTGAGACCCTGTTTGCCATTTAATAAATGGGGTCTTGCTAATATTCTACTTGTGTATATATCTCTCTCATGAATGAAGCTAATACGAACTCTATCAAGATGTTCTCTTATTCATTTTATAACTTTTGTTTTATATGTAATTATTTAATCAAATGATATTAACATGTGATTTGATTGGATGCCTGTGTTGTTGGTGTGTCGAATTAGAGTTAGAAGCCCAATACTAGACGGAAAGTGAGAGGAAACATATATCTAATACATTCAAGTCTTAGGTAAAGTTGTGGTGTCCAATTCACTTGTATGGTTGCATCTGAGTTTTGGCCATGATTTATTAAGCTATCGGCATGTATAACATAGTTTTACAACTTTTAGGTACGTAATAATTAATTCTATGTATGAAAATTGAGTGAGCATTCATTTTGATTCTTTAGATTATAAGTGTTGGTCACACAATTTATTCTCTCGAATTTGCGAATTATCAATTTAGTCCATTAACTTAACAAAATATCAATCAATTTAGGTATTTTTCTAAATTTAAACCACTATTTTAAATGTTCTATTTAAATCTTCTATGTTTGTCTTAATGCAGCAAAAAAGTATTCAAATATTCAAGACAGTATGAGACTGTTCAAGCACGAAAAACACCTTAGAATCACTTATAAGGAGGATTGACTAAACCAAAAGATATTCATATAGTTACAGAAAGATGATAAGAATTAAGTTATCTATATAATATACTGATATGGAGGTGTTATTATAGTGACATGGAGGAGTATAACTGAACATATTGAGGTTGTTTGATATGTATAAAACACTACTTAGTGAACAAATACTTTGGTTTTTGTTCTTATTCCTTATTGGGAAAAATTCAACTATTATTGAATTAACATGTTCTGTATTTGTGTGTTTAAAGGGACTTGAGGATAGTGGTATAGCAATTGACCTTAAAATGGACAAAATTTTAGAGGGTTCAGTTCCGTGTAAGATTCGAGCAAAGCGTGGATTTGCTACTCATCCAAGGAGTATTGCTGAAAGGGTAACTATCTTTACTTGTCATATTGCTAATACTAATTTGGGATTTGCTTAGTAATTTGTTTAATCCAAATTGGGTGAACTTTTTCTGTTTTTGAGTTTCTTGTTGTTATGTAGGTTCGGAGGACTCGTATTAGTGATCGCATAAGAAAACTTCAAGAACTTGTGCCAAATATGGATAAGGTTTAGCTTTTCATCTTAAACCACCATAACATGTTTGTTTAATGGTTTTTATTACCAAGAAATGATTTTGTTCAAGTTGTTATTTACCATACATTATGCTTTGTATCTTTTAACAGCAAGCAAGATGATGAATTGTCATAAGCATAACCTTTCTTTTCTTTTATTACATGTGAGGTTTTGAGTGAAATTTACTTGGAAAGATATTGCAATGATTATTTAATTCATCTATGATCAACGTGTGTTGTGTTTTATGATCGGTAATTCTTTCACTTTTGAGTAGTGTCTTAACTGTGAAGAAAAGTTCTGCATCCACTTAACTACCCTTTCTCTTTGAATTTGAAGTTAATTATTGACATAATGACATTGGTTAAGGAAACAAATTTAGAAAGTACTAATTGGGGATATTAAATTTTCCTTAAAAGTTCCTTTACTCAAAACTAGTAAAGTTGGGACCAGGTTTCTGTGTAGTTGAAAAGCAGTGTAGCAGTGCAGTCAGCATGCTCAAGGCCGTCCGATCAAGACCACATGGTCCAGATTTGAACCTCAGAATTTTATATTAAACAAACATAAAAACAGTCTTGATATCTGAACTGTCTGATTCTGATTGGGCGGTTCTAAGGTGCTGACTGCATACAATCATATGACTGCACCTAATCCAATTCCGCCAAGTTGATATTGTGTGTGGAGTGGAAAAGAGATGTTCTTTACTATTTGAATAAATCAGCAATCCGAAAAATGCCAGAATGTATGCACTGAATTTAAGTCCAACTTAACTACAAATCCTTAGGTTTTAATCCCCTTTTATACTTTTTATTCAGGTTCTTTTTTCTATGTATAAGTTTATTAGAAAATTTCCACTTTTGCAGTAACCTTAATGATTGAGAAATATCAAAAATCATAAATGTGAGGTAACCTTGTCTGATATGTCTCAGTTTTTTCCCAAACAACATATTTGGACTTTTTGGAAGGTGAAGTCTTCCTCTATGGTAAACACAGACACGCTTGGACTACAATCTTAGGCTTTGTTTGGGAGTTTGGAGGGGAGGGGAAGGGAGGGCTTTGGAAGGTGAGAAATATAGGGGAAAGTAGATAAATCTTTCTCATATTTGGGAAGAGTATTAATTTTAGAGAATGATATATTTTTTTCTGGTAAGTTATGCTGTTCAATGTGGCAGTGTCTGTTAGGATCTCAAATGAGAACGTAGGCCCAATGGTAAATTGGCTACCTAGTTGCACAAGTCCATTAGGTGGAGAGTGATGTTATCAAAACGAGACATGCTATTTGTTACAGATCTTGTTAGAAACGAAAGACAAGAATCAATACGTGTGAATGTGTTAAAAAATATTGACACTATTAATCTCTTTTTTGGCGGAATTCACGGGCTTAGTGGGTGTAAAGAGCGGTGGAGATTAGTTCGTACGATACTTGTGTTGACAGTTTTGTAAAAATAAGCATTTCTCTATCAAAATATAGGAAAGGATAGGGAATAATATGACGTGGTAGGGAGCGAGGGTGAGCAAATGGTGTGACCAATTCTGTTATAAGTGGGAGAACGGGAGAGAGGGAAGGGAGGGCATTGGATATTTTTGCAGTTAGTAACCGTTTGGGTTGGGCAGAGAGTGTTTCATCTCTTCTGCGAGGAGCATTTGATCTGGGATTACACGGGTTTATCTTCTATAATATCTTCTTTTTTCGTCAATAATACAATTTCATTTTCTCTCTTAATTGTGGTTCCTAAGTTTCTTTTGTTCTTGTAGCAAACAAATACCGCAGAGATGTTAGATGAGGCGGTAGCTTATGTCAAGTTTCTACAGAATCAAATTGAGGTAATCTTTTGTGTGTGACTAAATTTATGCTTGTCATTTGGTATTCGGTACTCTCTGCATTTTGTCACGCACTAAGTTGTTGACTAATCTTGCATGAATTGATACATTACAGGAACTATCAGAACAGCAAAGGAGGTGTAAATGCACGATTCCCGAGTAAATGCATAATTCCGTTTGCATATTCTCTTTTGAATTATCATATTTTTGGTGTTTTGATGAAGATTAACCATAACTCAGAGTGAAGTTTGTATCACATTACTCTACAACAAATACATGTTGGGGGGTGCCATTATCAATTTCATGAGGAATCCACTTCAGATAGAGTTCTTAGATAGTGTGTTATAG
Protein sequence

>MS.gene043162.t1

MQPVSGGGGGLTRFNSTPASWFESFILKEEDEVDERQQDHNLSFTQLLSNNNVAAGHGPGPSTPESHPYLSDYYSSPLTPTSVNVANNPFTQGLEDSGIAIDLKMDKILEGSVPCKIRAKRGFATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKFLQNQIEELSEQQRRCKCTIPELTITQSEVCITLLYNKYMLGGAIINFMRNPLQIEFLDSVL