AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene043270

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene043270.t1 MTR_7g009730 96.404 584 19 2 1 582 1 584 0.0 1155
MS.gene043270.t1 MTR_4g107970 40.035 577 258 22 37 565 68 604 1.57e-79 262
MS.gene043270.t1 MTR_4g107970 40.564 567 249 22 47 565 1 527 7.47e-79 258
MS.gene043270.t1 MTR_4g094412 41.304 322 88 9 199 486 225 479 7.25e-51 182
MS.gene043270.t1 MTR_4g094412 41.304 322 88 9 199 486 216 470 8.91e-51 182
MS.gene043270.t1 MTR_3g053330 36.426 291 114 4 190 480 225 444 1.06e-48 176
MS.gene043270.t1 MTR_7g110720 71.429 98 28 0 196 293 168 265 5.59e-47 170
MS.gene043270.t1 MTR_7g110720 71.429 98 28 0 196 293 195 292 5.71e-47 171
MS.gene043270.t1 MTR_2g088000 30.279 502 239 14 14 481 132 556 8.82e-47 173
MS.gene043270.t1 MTR_2g023930 39.044 251 127 5 31 276 135 364 1.68e-44 166
MS.gene043270.t1 MTR_4g132430 39.147 258 126 4 45 302 120 346 2.44e-44 164
MS.gene043270.t1 MTR_4g132430 64.035 114 41 0 189 302 99 212 3.41e-41 153
MS.gene043270.t1 MTR_4g049790 33.673 294 173 7 30 311 122 405 9.54e-41 156
MS.gene043270.t1 MTR_4g049760 32.440 373 160 12 46 386 113 425 1.19e-40 155
MS.gene043270.t1 MTR_2g045360 34.824 313 119 10 190 492 185 422 1.55e-39 150
MS.gene043270.t1 MTR_4g047580 34.545 275 156 8 51 311 110 374 4.46e-36 142
MS.gene043270.t1 MTR_4g007060 42.857 133 59 4 196 311 105 237 2.03e-25 106
MS.gene043270.t1 MTR_4g007060 42.857 133 59 4 196 311 139 271 2.29e-25 107
MS.gene043270.t1 MTR_1g013760 53.333 75 35 0 200 274 123 197 4.54e-23 100
MS.gene043270.t1 MTR_3g106060 61.017 59 23 0 216 274 137 195 5.56e-23 99.8
MS.gene043270.t1 MTR_1g013790 41.228 114 60 3 168 274 45 158 2.97e-22 96.7
MS.gene043270.t1 MTR_2g105060 60.000 60 24 0 216 275 93 152 3.11e-22 96.3
MS.gene043270.t1 MTR_2g105060 60.000 60 24 0 216 275 168 227 3.21e-22 98.2
MS.gene043270.t1 MTR_5g074400 55.000 80 31 2 199 274 398 476 4.74e-22 100
MS.gene043270.t1 MTR_5g074400 52.542 59 26 2 217 275 243 299 1.90e-12 70.5
MS.gene043270.t1 MTR_5g094430 44.231 104 56 2 179 282 215 316 5.20e-22 99.4
MS.gene043270.t1 MTR_5g094430 52.542 59 26 2 217 275 88 144 1.02e-11 67.8
MS.gene043270.t1 MTR_5g094430 44.231 104 56 2 179 282 193 294 5.26e-22 99.0
MS.gene043270.t1 MTR_5g094430 52.542 59 26 2 217 275 66 122 1.19e-11 67.4
MS.gene043270.t1 MTR_3g031220 56.338 71 30 1 204 274 352 421 7.37e-22 99.8
MS.gene043270.t1 MTR_3g031220 50.794 63 29 2 217 279 198 258 6.48e-13 71.6
MS.gene043270.t1 MTR_7g071120 49.412 85 42 1 201 285 308 391 8.12e-22 99.4
MS.gene043270.t1 MTR_7g071120 53.448 58 25 2 218 275 167 222 6.48e-12 68.6
MS.gene043270.t1 MTR_3g056100 38.462 130 61 3 156 274 206 327 1.25e-21 98.6
MS.gene043270.t1 MTR_3g056100 50.847 59 27 2 217 275 99 155 4.13e-11 65.9
MS.gene043270.t1 MTR_3g056100 38.462 130 61 3 156 274 193 314 1.29e-21 98.2
MS.gene043270.t1 MTR_3g056100 50.847 59 27 2 217 275 99 155 4.34e-11 65.9
MS.gene043270.t1 MTR_5g094430 44.231 104 56 2 179 282 327 428 1.46e-21 99.0
MS.gene043270.t1 MTR_5g094430 52.542 59 26 2 217 275 200 256 1.73e-11 67.4
MS.gene043270.t1 MTR_3g056100 38.462 130 61 3 156 274 350 471 1.51e-21 99.0
MS.gene043270.t1 MTR_3g056100 50.847 59 27 2 217 275 243 299 4.04e-11 66.2
MS.gene043270.t1 MTR_3g056100 38.462 130 61 3 156 274 337 458 1.70e-21 99.0
MS.gene043270.t1 MTR_3g056100 50.847 59 27 2 217 275 243 299 4.19e-11 66.2
MS.gene043270.t1 MTR_7g080000 38.931 131 74 3 194 321 406 533 2.23e-21 99.0
MS.gene043270.t1 MTR_7g080000 32.824 131 77 5 144 274 170 289 9.76e-11 65.1
MS.gene043270.t1 MTR_3g009470 47.917 96 47 2 204 297 482 576 6.96e-21 97.4
MS.gene043270.t1 MTR_3g009470 47.826 69 33 3 207 275 271 336 1.64e-11 67.8
MS.gene043270.t1 MTR_5g042920 42.276 123 68 3 154 274 255 376 7.48e-21 95.9
MS.gene043270.t1 MTR_5g042920 50.746 67 28 4 211 276 146 208 6.22e-12 68.2
MS.gene043270.t1 MTR_4g013260 50.649 77 37 1 200 276 319 394 1.24e-20 95.9
MS.gene043270.t1 MTR_4g013260 30.412 194 115 5 94 275 56 241 3.51e-14 75.5
MS.gene043270.t1 MTR_7g080020 35.766 137 78 3 194 321 467 602 1.46e-20 96.7
MS.gene043270.t1 MTR_2g033820 50.649 77 37 1 204 280 190 265 1.68e-20 94.0
MS.gene043270.t1 MTR_3g104750 51.389 72 34 1 204 275 91 161 2.17e-20 89.0
MS.gene043270.t1 MTR_1g015140 51.389 72 34 1 204 275 89 159 6.70e-20 87.4
MS.gene043270.t1 MTR_4g082580 41.228 114 63 3 161 274 225 334 7.65e-20 92.4
MS.gene043270.t1 MTR_7g011820 43.011 93 48 2 186 274 375 466 1.91e-19 92.0
MS.gene043270.t1 MTR_7g011820 53.448 58 25 2 217 274 228 283 2.57e-11 66.6
MS.gene043270.t1 MTR_7g109800 34.586 133 76 3 187 311 107 236 3.31e-19 89.0
MS.gene043270.t1 MTR_7g028415 46.914 81 40 2 208 288 86 163 4.46e-19 85.5
MS.gene043270.t1 MTR_7g028710 46.914 81 40 2 208 288 86 163 4.46e-19 85.5
MS.gene043270.t1 MTR_6g038890 61.404 57 22 0 189 245 160 216 7.30e-19 85.9
MS.gene043270.t1 MTR_4g094588 47.619 84 39 2 204 283 165 247 7.35e-19 88.6
MS.gene043270.t1 MTR_7g079010 51.389 72 34 1 204 275 128 198 7.53e-19 85.9
MS.gene043270.t1 MTR_4g130900 50.000 80 39 1 195 274 337 415 9.91e-19 89.7
MS.gene043270.t1 MTR_7g100510 51.948 77 34 2 205 279 349 424 1.13e-18 89.4
MS.gene043270.t1 MTR_7g100510 51.562 64 28 3 211 274 184 244 3.89e-12 68.9
MS.gene043270.t1 MTR_1g086790 37.671 146 64 4 204 323 145 289 1.17e-18 87.8
MS.gene043270.t1 MTR_4g122530 37.956 137 59 4 203 314 194 329 1.35e-18 89.0
MS.gene043270.t1 MTR_5g097490 52.113 71 33 1 204 274 239 308 1.69e-18 88.2
MS.gene043270.t1 MTR_5g097490 34.677 124 78 3 218 341 93 213 8.37e-11 64.7
MS.gene043270.t1 MTR_7g109600 37.209 129 68 3 217 335 53 178 2.85e-18 85.5
MS.gene043270.t1 MTR_5g016610 54.412 68 29 1 212 279 196 261 4.07e-18 85.1
MS.gene043270.t1 MTR_4g094908 57.627 59 25 0 218 276 267 325 5.63e-18 85.9
MS.gene043270.t1 MTR_8g096730 40.909 88 48 3 196 283 52 135 8.05e-18 80.9
MS.gene043270.t1 MTR_1g009613 46.988 83 36 2 202 278 243 323 1.24e-17 85.1
MS.gene043270.t1 MTR_5g091390 46.914 81 42 1 204 284 144 223 2.60e-17 83.6
MS.gene043270.t1 MTR_5g044695 61.404 57 22 0 189 245 49 105 4.98e-17 77.4
MS.gene043270.t1 MTR_8g092010 40.449 89 50 2 204 290 95 182 6.02e-17 79.7
MS.gene043270.t1 MTR_1g070455 56.140 57 25 0 218 274 294 350 6.43e-17 83.2
MS.gene043270.t1 MTR_1g077780 34.783 138 87 3 157 293 1 136 1.26e-16 77.4
MS.gene043270.t1 MTR_8g087000 48.000 75 38 1 207 281 67 140 1.31e-16 80.1
MS.gene043270.t1 MTR_8g087000 48.000 75 38 1 207 281 68 141 1.39e-16 80.1
MS.gene043270.t1 MTR_8g007270 35.659 129 76 3 152 274 83 210 1.60e-16 79.3
MS.gene043270.t1 MTR_2g032030 42.857 91 52 0 218 308 268 358 1.81e-16 82.8
MS.gene043270.t1 MTR_3g095080 47.887 71 36 1 204 274 131 200 1.97e-16 79.0
MS.gene043270.t1 MTR_3g095080 47.887 71 36 1 204 274 155 224 2.34e-16 79.3
MS.gene043270.t1 MTR_2g032030 42.857 91 52 0 218 308 268 358 4.92e-16 80.9
MS.gene043270.t1 MTR_3g108960 48.235 85 33 3 202 277 295 377 4.96e-16 80.9
MS.gene043270.t1 MTR_5g043880 47.297 74 38 1 201 274 108 180 6.69e-16 78.6
MS.gene043270.t1 MTR_8g092140 52.381 63 29 1 212 274 155 216 6.75e-16 77.8
MS.gene043270.t1 MTR_4g127040 43.678 87 41 2 202 282 226 310 6.76e-16 79.3
MS.gene043270.t1 MTR_3g095040 46.479 71 37 1 204 274 105 174 7.76e-16 77.0
MS.gene043270.t1 MTR_7g079040 40.659 91 51 1 200 287 134 224 1.87e-15 78.2
MS.gene043270.t1 MTR_2g024350 50.877 57 28 0 218 274 9 65 2.12e-15 76.3
MS.gene043270.t1 MTR_0117s0040 38.393 112 59 3 202 307 55 162 2.18e-15 76.6
MS.gene043270.t1 MTR_8g028565 40.659 91 51 1 200 287 135 225 2.65e-15 77.8
MS.gene043270.t1 MTR_2g016770 52.542 59 28 0 218 276 36 94 4.09e-15 75.1
MS.gene043270.t1 MTR_7g062220 48.611 72 35 2 204 274 110 180 4.65e-15 77.0
MS.gene043270.t1 MTR_2g016770 52.542 59 28 0 218 276 28 86 5.44e-15 74.7
MS.gene043270.t1 MTR_2g083870 45.946 74 40 0 208 281 71 144 8.46e-15 75.1
MS.gene043270.t1 MTR_2g024380 52.632 57 27 0 218 274 252 308 9.85e-15 77.4
MS.gene043270.t1 MTR_8g098945 38.372 86 53 0 215 300 127 212 2.73e-14 73.9
MS.gene043270.t1 MTR_4g007060 52.542 59 26 2 198 254 141 199 4.15e-14 72.8
MS.gene043270.t1 MTR_1g099600 38.095 105 60 2 188 287 151 255 1.34e-13 72.4
MS.gene043270.t1 MTR_6g086555 48.649 74 36 2 204 276 193 265 1.89e-13 72.8
MS.gene043270.t1 MTR_3g031220 50.794 63 29 2 217 279 198 258 2.90e-13 72.0
MS.gene043270.t1 MTR_3g009470 47.826 69 33 3 207 275 271 336 1.20e-11 67.8
MS.gene043270.t1 MTR_8g099350 45.205 73 37 2 202 272 118 189 2.98e-11 65.9
MS.gene043270.t1 MTR_3g090860 44.595 74 38 2 201 272 118 190 3.21e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene043270.t1 AT5G15130 39.691 582 259 19 8 558 10 530 3.94e-82 268
MS.gene043270.t1 AT5G15130 40.700 543 236 18 47 558 1 488 5.46e-80 261
MS.gene043270.t1 AT1G18860 38.160 511 231 19 27 481 29 510 1.13e-66 226
MS.gene043270.t1 AT1G68150 40.000 300 123 8 46 332 100 355 8.53e-54 187
MS.gene043270.t1 AT4G04450 36.812 345 169 8 36 364 11 322 2.84e-53 187
MS.gene043270.t1 AT4G04450 36.812 345 169 8 36 364 105 416 4.00e-52 187
MS.gene043270.t1 AT1G69810 37.026 343 169 9 33 366 19 323 2.57e-45 165
MS.gene043270.t1 AT1G62300 38.095 294 139 8 9 301 145 396 6.94e-42 159
MS.gene043270.t1 AT4G01720 77.215 79 18 0 198 276 220 298 3.97e-39 150
MS.gene043270.t1 AT4G22070 76.316 76 18 0 201 276 281 356 3.38e-37 145
MS.gene043270.t1 AT4G22070 76.316 76 18 0 201 276 281 356 3.38e-37 145
MS.gene043270.t1 AT4G22070 76.316 76 18 0 201 276 281 356 3.38e-37 145
MS.gene043270.t1 AT4G22070 76.316 76 18 0 201 276 281 356 3.38e-37 145
MS.gene043270.t1 AT1G69810 39.259 270 118 8 105 366 34 265 1.46e-36 139
MS.gene043270.t1 AT4G31800 66.667 60 20 0 215 274 109 168 2.72e-25 105
MS.gene043270.t1 AT4G31800 66.667 60 20 0 215 274 174 233 3.55e-25 106
MS.gene043270.t1 AT2G25000 63.636 66 23 1 210 274 95 160 5.60e-24 101
MS.gene043270.t1 AT2G25000 63.636 66 23 1 210 274 95 160 5.60e-24 101
MS.gene043270.t1 AT2G25000 63.636 66 23 1 210 274 117 182 1.17e-23 100
MS.gene043270.t1 AT2G25000 63.636 66 23 1 210 274 138 203 1.19e-23 101
MS.gene043270.t1 AT1G80840 53.333 75 35 0 202 276 131 205 1.86e-23 101
MS.gene043270.t1 AT2G38470 41.985 131 60 5 204 320 349 477 9.44e-23 102
MS.gene043270.t1 AT2G38470 51.724 58 26 2 218 275 185 240 5.36e-12 68.9
MS.gene043270.t1 AT1G29860 39.024 123 70 2 173 295 92 209 3.22e-22 97.4
MS.gene043270.t1 AT5G56270 44.545 110 57 2 204 313 474 579 3.68e-22 101
MS.gene043270.t1 AT4G26640 37.908 153 73 5 193 331 180 324 7.81e-22 98.2
MS.gene043270.t1 AT4G26640 46.377 69 33 3 209 275 25 91 4.18e-11 65.5
MS.gene043270.t1 AT4G26640 37.908 153 73 5 193 331 180 324 7.81e-22 98.2
MS.gene043270.t1 AT4G26640 46.377 69 33 3 209 275 25 91 4.18e-11 65.5
MS.gene043270.t1 AT4G26640 37.908 153 73 5 193 331 180 324 7.81e-22 98.2
MS.gene043270.t1 AT4G26640 46.377 69 33 3 209 275 25 91 4.18e-11 65.5
MS.gene043270.t1 AT4G26640 37.908 153 73 5 193 331 180 324 7.81e-22 98.2
MS.gene043270.t1 AT4G26640 46.377 69 33 3 209 275 25 91 4.18e-11 65.5
MS.gene043270.t1 AT5G49520 37.313 134 68 3 201 321 205 335 1.29e-21 97.8
MS.gene043270.t1 AT4G26640 37.908 153 73 5 193 331 284 428 1.94e-21 98.2
MS.gene043270.t1 AT4G26640 46.377 69 33 3 209 275 129 195 5.06e-11 65.9
MS.gene043270.t1 AT4G26640 37.908 153 73 5 193 331 316 460 2.34e-21 98.2
MS.gene043270.t1 AT4G26640 46.377 69 33 3 209 275 161 227 5.27e-11 65.9
MS.gene043270.t1 AT4G26640 37.908 153 73 5 193 331 356 500 3.12e-21 98.2
MS.gene043270.t1 AT4G26640 46.377 69 33 3 209 275 201 267 6.48e-11 65.5
MS.gene043270.t1 AT5G41570 48.235 85 43 1 193 277 74 157 5.97e-21 90.9
MS.gene043270.t1 AT5G26170 34.667 150 77 4 141 274 25 169 8.50e-21 90.5
MS.gene043270.t1 AT1G13960 49.438 89 38 2 194 276 227 314 9.38e-21 94.7
MS.gene043270.t1 AT1G13960 51.562 64 28 3 211 274 71 131 3.24e-12 68.9
MS.gene043270.t1 AT1G13960 49.438 89 38 2 194 276 380 467 1.16e-20 95.9
MS.gene043270.t1 AT1G13960 51.562 64 28 3 211 274 224 284 2.25e-12 70.1
MS.gene043270.t1 AT2G46130 55.556 72 31 1 204 275 17 87 2.09e-20 87.0
MS.gene043270.t1 AT2G04880 49.412 85 38 2 196 276 258 341 2.31e-20 94.7
MS.gene043270.t1 AT2G04880 51.667 60 27 2 216 275 110 167 1.63e-12 70.5
MS.gene043270.t1 AT2G03340 39.098 133 46 4 204 335 402 500 2.42e-20 95.1
MS.gene043270.t1 AT2G03340 53.030 66 28 3 211 276 245 307 2.10e-13 73.2
MS.gene043270.t1 AT1G64000 51.351 74 35 1 204 277 101 173 3.10e-20 89.4
MS.gene043270.t1 AT2G04880 49.412 85 38 2 196 276 282 365 3.20e-20 94.4
MS.gene043270.t1 AT2G04880 51.667 60 27 2 216 275 110 167 2.02e-12 70.1
MS.gene043270.t1 AT1G55600 45.977 87 42 2 193 275 279 364 3.86e-20 94.4
MS.gene043270.t1 AT1G29280 48.810 84 42 1 198 281 56 138 4.05e-20 90.9
MS.gene043270.t1 AT5G13080 47.297 74 38 1 204 277 54 126 4.78e-20 87.4
MS.gene043270.t1 AT4G26440 32.645 242 134 10 166 400 325 544 8.24e-20 93.6
MS.gene043270.t1 AT3G01080 53.521 71 32 1 204 274 293 362 2.33e-19 91.3
MS.gene043270.t1 AT3G01080 53.521 71 32 1 204 274 331 400 2.34e-19 91.7
MS.gene043270.t1 AT4G18170 47.561 82 42 1 195 276 150 230 2.49e-19 89.7
MS.gene043270.t1 AT5G07100 50.649 77 37 1 200 276 124 199 4.25e-19 86.7
MS.gene043270.t1 AT5G07100 50.649 77 37 1 200 276 124 199 4.25e-19 86.7
MS.gene043270.t1 AT5G07100 50.649 77 37 1 200 276 124 199 4.25e-19 86.7
MS.gene043270.t1 AT5G07100 50.649 77 37 1 200 276 124 199 4.25e-19 86.7
MS.gene043270.t1 AT2G23320 61.017 59 23 0 218 276 241 299 4.75e-19 89.0
MS.gene043270.t1 AT5G46350 42.105 95 54 1 204 298 170 263 4.99e-19 89.0
MS.gene043270.t1 AT5G07100 52.000 75 35 1 200 274 217 290 6.34e-19 88.2
MS.gene043270.t1 AT4G30935 38.938 113 64 2 199 311 313 420 7.55e-19 90.1
MS.gene043270.t1 AT1G69310 51.351 74 35 1 201 274 131 203 1.67e-18 86.7
MS.gene043270.t1 AT1G69310 51.351 74 35 1 201 274 131 203 1.67e-18 86.7
MS.gene043270.t1 AT1G69310 51.351 74 35 1 201 274 131 203 1.67e-18 86.7
MS.gene043270.t1 AT2G47260 41.584 101 54 2 201 297 158 257 1.96e-18 87.4
MS.gene043270.t1 AT5G64810 47.887 71 36 1 204 274 97 166 1.96e-18 84.3
MS.gene043270.t1 AT2G30250 50.649 77 37 1 200 276 311 386 2.48e-18 87.8
MS.gene043270.t1 AT2G30590 50.000 80 32 2 202 275 294 371 6.41e-18 86.3
MS.gene043270.t1 AT3G04670 55.385 65 28 1 222 286 267 330 7.00e-18 85.5
MS.gene043270.t1 AT4G24240 45.349 86 43 1 202 283 262 347 1.39e-17 85.1
MS.gene043270.t1 AT2G44745 49.296 71 35 1 204 274 132 201 2.06e-17 82.0
MS.gene043270.t1 AT5G28650 53.846 65 29 1 222 286 267 330 2.31e-17 84.0
MS.gene043270.t1 AT2G37260 58.065 62 25 1 215 276 265 325 4.16e-17 83.6
MS.gene043270.t1 AT2G37260 54.386 57 24 2 218 274 84 138 1.31e-12 69.7
MS.gene043270.t1 AT2G37260 58.065 62 25 1 215 276 267 327 4.33e-17 83.6
MS.gene043270.t1 AT2G37260 54.386 57 24 2 218 274 86 140 1.37e-12 69.7
MS.gene043270.t1 AT2G37260 58.065 62 25 1 215 276 347 407 8.79e-17 83.6
MS.gene043270.t1 AT2G37260 54.386 57 24 2 218 274 166 220 1.96e-12 70.1
MS.gene043270.t1 AT4G31550 51.316 76 33 3 201 274 230 303 1.37e-16 81.6
MS.gene043270.t1 AT2G24570 45.545 101 47 4 201 299 227 321 1.41e-16 81.6
MS.gene043270.t1 AT4G31550 51.316 76 33 3 201 274 229 302 1.42e-16 81.6
MS.gene043270.t1 AT4G39410 47.887 71 36 1 204 274 210 279 3.15e-16 80.1
MS.gene043270.t1 AT3G62340 50.000 72 35 1 204 275 105 175 3.55e-16 79.7
MS.gene043270.t1 AT3G01970 46.479 71 37 1 204 274 52 121 5.90e-16 75.9
MS.gene043270.t1 AT1G30650 49.254 67 34 0 218 284 218 284 1.09e-15 80.1
MS.gene043270.t1 AT2G46130 51.389 72 30 2 204 275 17 83 1.70e-15 73.2
MS.gene043270.t1 AT3G58710 55.000 60 27 0 217 276 71 130 1.78e-15 77.4
MS.gene043270.t1 AT3G58710 55.000 60 27 0 217 276 70 129 1.91e-15 77.4
MS.gene043270.t1 AT2G34830 49.254 67 34 0 218 284 216 282 2.31e-15 79.0
MS.gene043270.t1 AT2G34830 49.254 67 34 0 218 284 225 291 2.85e-15 79.0
MS.gene043270.t1 AT4G01250 46.479 71 38 0 217 287 128 198 4.15e-15 76.6
MS.gene043270.t1 AT2G21900 46.667 60 31 1 216 275 108 166 1.96e-14 72.8
MS.gene043270.t1 AT5G52830 48.571 70 36 0 218 287 166 235 2.08e-14 75.5
MS.gene043270.t1 AT4G23550 42.857 77 44 0 216 292 139 215 4.00e-14 73.9
MS.gene043270.t1 AT4G31800 65.000 40 14 0 215 254 174 213 4.32e-14 72.8
MS.gene043270.t1 AT1G69310 47.297 74 34 2 201 274 131 199 1.21e-13 72.0
MS.gene043270.t1 AT5G43290 47.222 72 36 2 204 274 100 170 1.80e-13 71.6
MS.gene043270.t1 AT5G45050 38.043 92 57 0 218 309 1042 1133 1.01e-12 72.0
MS.gene043270.t1 AT5G45050 38.043 92 57 0 218 309 1181 1272 1.06e-12 72.0
MS.gene043270.t1 AT5G45050 38.043 92 57 0 218 309 1153 1244 1.14e-12 71.6
MS.gene043270.t1 AT5G24110 43.836 73 38 2 202 272 99 170 2.14e-12 68.6
MS.gene043270.t1 AT1G66560 47.761 67 33 1 208 272 94 160 6.81e-11 63.5
MS.gene043270.t1 AT2G40740 51.724 58 26 1 217 272 173 230 8.15e-11 63.9

Find 97 sgRNAs with CRISPR-Local

Find 208 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAATAATAACAATAAATT+AGG 0.135542 7.2:-88094818 MS.gene043270:CDS
CACAACAATTCTACATCTTT+TGG 0.181125 7.2:-88095091 MS.gene043270:CDS
TCTTTCTCTTTAGGTTTGTT+AGG 0.187408 7.2:+88097255 None:intergenic
AACAATTTGTTGAATCAAAA+TGG 0.213590 7.2:-88094485 MS.gene043270:CDS
GAACAGAAACTAAGATTATT+TGG 0.219427 7.2:+88094881 None:intergenic
TCCATATCTTCTTTCTCTTT+AGG 0.253785 7.2:+88097246 None:intergenic
AGAGAGAATGGTTTAGGTTC+AGG 0.273214 7.2:-88094548 MS.gene043270:CDS
GATGATATTGGTGTGAAATT+TGG 0.273603 7.2:+88094848 None:intergenic
TTGTTGGAAACAAGTTATTA+TGG 0.281677 7.2:+88094975 None:intergenic
GAAAATAGAGAGAATGGTTT+AGG 0.299650 7.2:-88094554 MS.gene043270:CDS
TCTTCTTTCTTATACTCATT+TGG 0.300183 7.2:+88097294 None:intergenic
GGTTCTTCATCGATTTCTTC+TGG 0.302455 7.2:+88097348 None:intergenic
GTATATACCTGTTTCCTAAC+TGG 0.305967 7.2:+88096357 None:intergenic
AATTCTTCTGAGCTATTCAT+TGG 0.315815 7.2:+88097156 None:intergenic
GAAGTTGAAGTTGAAGAAAA+AGG 0.324758 7.2:-88097126 MS.gene043270:CDS
ACAATAATAACAATAAATTA+GGG 0.362140 7.2:-88094817 MS.gene043270:CDS
GTGTTCTTGATTGTTCAAAT+TGG 0.364271 7.2:+88095026 None:intergenic
GCTGCAGTTTCGTCGATTGT+AGG 0.370957 7.2:-88094608 MS.gene043270:CDS
TCTTCAACTTCAACTTCCTT+TGG 0.371657 7.2:+88097132 None:intergenic
GAGAGAATGGTTTAGGTTCA+GGG 0.373934 7.2:-88094547 MS.gene043270:CDS
AGATTATTTGGAGAAAATCT+TGG 0.374052 7.2:+88094893 None:intergenic
ACATGTCATCTGCACATCTT+TGG 0.375837 7.2:+88095266 None:intergenic
CTGCTCTTAGAAACAGAAAA+TGG 0.375936 7.2:+88094371 None:intergenic
CTTTCTCTTTAGGTTTGTTA+GGG 0.381231 7.2:+88097256 None:intergenic
AACCCCTTCAAGGCAAGCTT+TGG 0.383268 7.2:-88094687 MS.gene043270:CDS
TGGATTAGACTCTAAATATA+TGG 0.384134 7.2:-88097208 MS.gene043270:CDS
TCACACCAATATCATCCATT+TGG 0.393132 7.2:-88094841 MS.gene043270:CDS
GCAGCTTCAATGATGGTATC+AGG 0.393995 7.2:-88095160 MS.gene043270:CDS
TTGTTCCAAATGGATGATAT+TGG 0.395825 7.2:+88094836 None:intergenic
GGAATGAAGAAATGTTGTTT+TGG 0.395896 7.2:+88095004 None:intergenic
ACCTAAAGAGAAAGAAGATA+TGG 0.399352 7.2:-88097247 MS.gene043270:CDS
TCAGCCAAAGCTTGCCTTGA+AGG 0.406538 7.2:+88094683 None:intergenic
GGATGTCAATGGAGAAAGTA+TGG 0.409848 7.2:-88096447 MS.gene043270:CDS
TTAGCCTGTGAACTTGTTGT+TGG 0.415702 7.2:+88094422 None:intergenic
CAAGAAGAAAATAGAGAGAA+TGG 0.423211 7.2:-88094560 MS.gene043270:CDS
ATTGTTATTATTGTTCCAAA+TGG 0.426970 7.2:+88094826 None:intergenic
TTCATATGTTGTGATTAAGA+TGG 0.434775 7.2:+88095243 None:intergenic
CAAGTTATCAAACCCCTTCA+AGG 0.448201 7.2:-88094697 MS.gene043270:CDS
TAGAGTCTAATCCAAGACTT+AGG 0.454455 7.2:+88097217 None:intergenic
AAATTGTTTGAAACCATTTG+AGG 0.460922 7.2:+88094500 None:intergenic
CAGCCAAAGCTTGCCTTGAA+GGG 0.463069 7.2:+88094684 None:intergenic
TTGCACCAGCATGCCCAGTT+AGG 0.463809 7.2:-88096371 MS.gene043270:CDS
ATGGAAGTTAACCTAAGTCT+TGG 0.464788 7.2:-88097228 MS.gene043270:CDS
AGCATGCCCAGTTAGGAAAC+AGG 0.467255 7.2:-88096364 MS.gene043270:intron
GGAAACAAGTTATTATGGTT+TGG 0.467619 7.2:+88094980 None:intergenic
CGATAGTATGCTCTTGGACA+TGG 0.469854 7.2:+88096402 None:intergenic
GTTAGGTCAAGAGTGATTGT+TGG 0.470080 7.2:+88094959 None:intergenic
ACTTGGTGAGTATCCTCAAA+TGG 0.474336 7.2:-88094513 MS.gene043270:CDS
GTGCAACGATAGTATGCTCT+TGG 0.484000 7.2:+88096396 None:intergenic
ATAAGGATGAAGGAGAGGTT+AGG 0.484803 7.2:+88094942 None:intergenic
AACAAGTTATTATGGTTTGG+TGG 0.484846 7.2:+88094983 None:intergenic
AAAATGTGCTACAGAGGAGA+TGG 0.486262 7.2:-88097511 MS.gene043270:CDS
AGCTATGTTTGATGATGATA+AGG 0.489640 7.2:+88094925 None:intergenic
GAAACAGAAAATGGCAATGA+AGG 0.491332 7.2:+88094380 None:intergenic
AAATGGTAAAGGATGCTTGA+AGG 0.499468 7.2:-88094468 MS.gene043270:CDS
CTAGATCAAAATTGTTGACA+TGG 0.502185 7.2:+88094321 None:intergenic
TCAGGGTTGAATTTGAAACT+TGG 0.503944 7.2:-88094530 MS.gene043270:CDS
TGTTAACGATGTCAAAGAAA+CGG 0.508949 7.2:+88097412 None:intergenic
TTGTTGAATCAAAATGGTAA+AGG 0.509980 7.2:-88094479 MS.gene043270:CDS
TGTTTCCTAACTGGGCATGC+TGG 0.511634 7.2:+88096366 None:intergenic
ATCTTAATCACAACATATGA+AGG 0.515584 7.2:-88095241 MS.gene043270:CDS
AATGGTAAAGGATGCTTGAA+GGG 0.515986 7.2:-88094467 MS.gene043270:CDS
TTCAGCTGCAGCTTCAATGA+TGG 0.518537 7.2:-88095167 MS.gene043270:CDS
TATGGACAGAAGATAGCAAA+AGG 0.522272 7.2:-88096429 MS.gene043270:CDS
ACTCATTTGGACTTCTTCCA+AGG 0.530874 7.2:+88097307 None:intergenic
GAGTTTGTGTCACTTTGCCT+TGG 0.535145 7.2:-88097324 MS.gene043270:CDS
TTGACATGGTTAACAATGGA+TGG 0.535314 7.2:+88094335 None:intergenic
AATTCACCAACACAAATCAA+TGG 0.535541 7.2:-88095067 MS.gene043270:CDS
ACTTTCAAACAGATGAATGA+TGG 0.544493 7.2:-88096468 MS.gene043270:intron
TATATACCTGTTTCCTAACT+GGG 0.545205 7.2:+88096358 None:intergenic
TTTAGACCATTGATTTGTGT+TGG 0.547844 7.2:+88095061 None:intergenic
TCTTCAATCTCTGAACTGCT+AGG 0.554571 7.2:+88098545 None:intergenic
GTCACCAACAACAAGTTCAC+AGG 0.558090 7.2:-88094426 MS.gene043270:CDS
AAGGCAAAGTGACACAAACT+CGG 0.562482 7.2:+88097326 None:intergenic
TGTGAAATTTGGTTGTTGTG+TGG 0.564092 7.2:+88094859 None:intergenic
TTTGATGATGATAAGGATGA+AGG 0.564477 7.2:+88094932 None:intergenic
AGCCAAAGCTTGCCTTGAAG+GGG 0.565025 7.2:+88094685 None:intergenic
AGATGAATGATGGATGTCAA+TGG 0.566197 7.2:-88096458 MS.gene043270:CDS
GCTATAACTGAATGAAGACT+TGG 0.566497 7.2:+88094632 None:intergenic
TGATTGCTCTACTGAACAAG+AGG 0.569404 7.2:-88098486 MS.gene043270:CDS
GCTGATGCTGTTACTTGAAG+AGG 0.585701 7.2:+88095205 None:intergenic
CTCTAAATATATGGTACCAA+CGG 0.598516 7.2:-88097199 MS.gene043270:CDS
ATTGTTGACATGGTTAACAA+TGG 0.603385 7.2:+88094331 None:intergenic
AGCTGAAGTTGTGTATGCCA+TGG 0.611049 7.2:+88095183 None:intergenic
TACTGAACAAGAGGTTACAA+AGG 0.612360 7.2:-88098477 MS.gene043270:intron
CAAACTAAAATGTGCTACAG+AGG 0.618198 7.2:-88097517 MS.gene043270:CDS
AAATGTGCTACAGAGGAGAT+GGG 0.620689 7.2:-88097510 MS.gene043270:CDS
GGACAAGGATCAAACAATGG+TGG 0.624982 7.2:-88094587 MS.gene043270:CDS
AAATCAGATACTAACTCCGT+TGG 0.628268 7.2:+88097183 None:intergenic
TGATGATAAGGATGAAGGAG+AGG 0.633201 7.2:+88094937 None:intergenic
CTGATGCTGTTACTTGAAGA+GGG 0.633343 7.2:+88095206 None:intergenic
TCAAGTAACAGCATCAGCCA+TGG 0.634105 7.2:-88095200 MS.gene043270:CDS
AGCTAAATGTGATACTCCCA+CGG 0.647058 7.2:-88097007 MS.gene043270:intron
AGGCAAAGTGACACAAACTC+GGG 0.648244 7.2:+88097327 None:intergenic
GTTTCGTCGATTGTAGGACA+AGG 0.650226 7.2:-88094602 MS.gene043270:CDS
TAGCTCAGAAGAATTACCAA+AGG 0.660407 7.2:-88097148 MS.gene043270:CDS
GTAGGACAAGGATCAAACAA+TGG 0.686881 7.2:-88094590 MS.gene043270:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATTGACTAAATTTA+TGG - chr7.2:88096574-88096593 MS.gene043270:intron 10.0%
!! AACAATAATAACAATAAATT+AGG - chr7.2:88098046-88098065 MS.gene043270:intron 10.0%
!! ACAATAATAACAATAAATTA+GGG - chr7.2:88098047-88098066 MS.gene043270:intron 10.0%
!! ATTCATAACTATTTATAAAA+GGG - chr7.2:88094786-88094805 MS.gene043270:CDS 10.0%
!! TATTCATAACTATTTATAAA+AGG - chr7.2:88094785-88094804 MS.gene043270:CDS 10.0%
!!! ATTTAGTCAATTTTTTTTAT+AGG + chr7.2:88096571-88096590 None:intergenic 10.0%
!!! TATTTTTTTTTATGCTTATA+CGG + chr7.2:88097253-88097272 None:intergenic 10.0%
!! AAAATTTAAGTCTCTAAATT+AGG - chr7.2:88096245-88096264 MS.gene043270:intron 15.0%
!! AGTCATAAAAAGATTTAATA+AGG + chr7.2:88095028-88095047 None:intergenic 15.0%
!! ATTATTATATATATAACACG+TGG + chr7.2:88095167-88095186 None:intergenic 15.0%
!! TATAGCATTTCATTAATAAT+TGG - chr7.2:88097042-88097061 MS.gene043270:CDS 15.0%
!!! AATTTAGAGACTTAAATTTT+TGG + chr7.2:88096245-88096264 None:intergenic 15.0%
!!! ACAAATTTAAAGCAAAATAA+AGG - chr7.2:88096076-88096095 MS.gene043270:intron 15.0%
!!! ATTTAGAGACTTAAATTTTT+GGG + chr7.2:88096244-88096263 None:intergenic 15.0%
!!! ATTTTTTGCTTTCAAAATAT+CGG + chr7.2:88097227-88097246 None:intergenic 15.0%
!!! CAAATTTAAAGCAAAATAAA+GGG - chr7.2:88096077-88096096 MS.gene043270:intron 15.0%
!!! CTGAAATCATATAAAATTTT+GGG + chr7.2:88097576-88097595 None:intergenic 15.0%
!!! TGAAATCATATAAAATTTTG+GGG + chr7.2:88097575-88097594 None:intergenic 15.0%
!!! TTATCCTTATTAATCTTTTT+AGG - chr7.2:88095198-88095217 MS.gene043270:CDS 15.0%
!!! TTTTTTTTTTTTTGTAGTAG+TGG - chr7.2:88096333-88096352 MS.gene043270:intron 15.0%
!! AACAAGAGTAAAAAAATTTG+TGG - chr7.2:88096636-88096655 MS.gene043270:intron 20.0%
!! AACATTAAGTACAAAAATTG+TGG + chr7.2:88096700-88096719 None:intergenic 20.0%
!! AACCATTATAAAGAATTTAG+AGG - chr7.2:88097390-88097409 MS.gene043270:CDS 20.0%
!! AATTTACTATCTTGTATTCT+AGG - chr7.2:88095908-88095927 MS.gene043270:intron 20.0%
!! AGAGAAACTGAAATTTAATT+CGG - chr7.2:88095961-88095980 MS.gene043270:intron 20.0%
!! ATATTGAAAAAACTCAAGTT+AGG - chr7.2:88098095-88098114 MS.gene043270:intron 20.0%
!! ATGTCCTAAAAAGATTAATA+AGG + chr7.2:88095205-88095224 None:intergenic 20.0%
!! CAATATGACTGATTATTTAT+AGG - chr7.2:88094709-88094728 MS.gene043270:CDS 20.0%
!! CTTTCAAAAAAATATATCAG+TGG + chr7.2:88097013-88097032 None:intergenic 20.0%
!! TACTATTCATGAACAATAAT+TGG + chr7.2:88094462-88094481 None:intergenic 20.0%
!!! AACAATTTGTTGAATCAAAA+TGG - chr7.2:88098379-88098398 MS.gene043270:intron 20.0%
!!! AATGTTATTTCTTCTTCATA+TGG - chr7.2:88095085-88095104 MS.gene043270:CDS 20.0%
!!! ACTTGAGTTTTTTCAATATT+AGG + chr7.2:88098094-88098113 None:intergenic 20.0%
!!! ATTGTTATTATTGTTCCAAA+TGG + chr7.2:88098041-88098060 None:intergenic 20.0%
!!! CCAAAATTTTATATGATTTC+AGG - chr7.2:88097574-88097593 MS.gene043270:intron 20.0%
!!! CCTGAAATCATATAAAATTT+TGG + chr7.2:88097577-88097596 None:intergenic 20.0%
!!! CTTGAGTTTTTTCAATATTA+GGG + chr7.2:88098093-88098112 None:intergenic 20.0%
!!! GATTTTGATAGAAATTTTCT+TGG + chr7.2:88098135-88098154 None:intergenic 20.0%
!!! TACTTAATGTTTTAAGAACT+AGG - chr7.2:88096709-88096728 MS.gene043270:intron 20.0%
!!! TTGATGCTTTGTTATTTATA+AGG - chr7.2:88094514-88094533 MS.gene043270:CDS 20.0%
!!! TTTTCTTGGAAATGATTAAA+AGG + chr7.2:88098121-88098140 None:intergenic 20.0%
! AAATTAATTGATACTAACCG+TGG + chr7.2:88095877-88095896 None:intergenic 25.0%
! AAGAAGTAAAAAAATTGGTG+AGG + chr7.2:88094430-88094449 None:intergenic 25.0%
! AATTAATTGATACTAACCGT+GGG + chr7.2:88095876-88095895 None:intergenic 25.0%
! AGATTATTTGGAGAAAATCT+TGG + chr7.2:88097974-88097993 None:intergenic 25.0%
! AGCAAAATAAAGGGTAATAT+AGG - chr7.2:88096086-88096105 MS.gene043270:intron 25.0%
! ATAGCATTTCTTGAACTTAT+AGG + chr7.2:88096945-88096964 None:intergenic 25.0%
! ATAGGTTTAATTGGTTGAAT+CGG + chr7.2:88096927-88096946 None:intergenic 25.0%
! ATCTTAATCACAACATATGA+AGG - chr7.2:88097623-88097642 MS.gene043270:intron 25.0%
! CAATGAGGTATAATAAGTAA+TGG - chr7.2:88097075-88097094 MS.gene043270:CDS 25.0%
! CCAATTAAACTATAATCCAA+AGG + chr7.2:88096755-88096774 None:intergenic 25.0%
! CCTTTGGATTATAGTTTAAT+TGG - chr7.2:88096752-88096771 MS.gene043270:intron 25.0%
! CTTGAACTTATAGGTTTAAT+TGG + chr7.2:88096936-88096955 None:intergenic 25.0%
! GAACAGAAACTAAGATTATT+TGG + chr7.2:88097986-88098005 None:intergenic 25.0%
! GACCTCTAAATTCTTTATAA+TGG + chr7.2:88097395-88097414 None:intergenic 25.0%
! GCAAAATAAAGGGTAATATA+GGG - chr7.2:88096087-88096106 MS.gene043270:intron 25.0%
! GGTTTCATATTTGAACTTAT+AGG + chr7.2:88096992-88097011 None:intergenic 25.0%
! TAAAAAAATTGGTGAGGATT+AGG + chr7.2:88094424-88094443 None:intergenic 25.0%
! TCTTCTTTCTTATACTCATT+TGG + chr7.2:88095573-88095592 None:intergenic 25.0%
! TGATTTATGATAGAACACTA+TGG - chr7.2:88097434-88097453 MS.gene043270:CDS 25.0%
! TGCACAAGAAGTAAAAAAAT+TGG + chr7.2:88094435-88094454 None:intergenic 25.0%
! TTCATATGTTGTGATTAAGA+TGG + chr7.2:88097624-88097643 None:intergenic 25.0%
! TTCCTAGAATTCAAAATCAT+AGG + chr7.2:88095325-88095344 None:intergenic 25.0%
! TTGTTGAATCAAAATGGTAA+AGG - chr7.2:88098385-88098404 MS.gene043270:intron 25.0%
! TTGTTGGAAACAAGTTATTA+TGG + chr7.2:88097892-88097911 None:intergenic 25.0%
!! AAATTGTTTGAAACCATTTG+AGG + chr7.2:88098367-88098386 None:intergenic 25.0%
!! GTTTCTCTAATAGTTTTTCT+AGG + chr7.2:88097373-88097392 None:intergenic 25.0%
!! TGGATTAGACTCTAAATATA+TGG - chr7.2:88095656-88095675 MS.gene043270:intron 25.0%
!!! GATCTCTAAAATCTTTTTAG+TGG - chr7.2:88096218-88096237 MS.gene043270:intron 25.0%
!!! GTTTTGTTCATATAGTATTG+TGG - chr7.2:88094889-88094908 MS.gene043270:CDS 25.0%
!!! TAGAGAGATTTTTTGTGTTT+AGG - chr7.2:88094684-88094703 MS.gene043270:CDS 25.0%
!!! TGTCCTTGATAATCTTTTTA+TGG - chr7.2:88094920-88094939 MS.gene043270:CDS 25.0%
!!! TTAGCCTACAAACTTTTTTA+CGG - chr7.2:88096013-88096032 MS.gene043270:intron 25.0%
AATTCACCAACACAAATCAA+TGG - chr7.2:88097797-88097816 MS.gene043270:intron 30.0%
AATTCTTCTGAGCTATTCAT+TGG + chr7.2:88095711-88095730 None:intergenic 30.0%
ACCTAAAGAGAAAGAAGATA+TGG - chr7.2:88095617-88095636 MS.gene043270:intron 30.0%
ACGCCATAAAAAGATTATCA+AGG + chr7.2:88094926-88094945 None:intergenic 30.0%
ACGCTAAGTGTTATATATGT+CGG - chr7.2:88096163-88096182 MS.gene043270:intron 30.0%
ACTTTCAAACAGATGAATGA+TGG - chr7.2:88096396-88096415 MS.gene043270:CDS 30.0%
ATTGGTTGTTCAATACAATG+AGG - chr7.2:88097060-88097079 MS.gene043270:CDS 30.0%
ATTGTTGACATGGTTAACAA+TGG + chr7.2:88098536-88098555 None:intergenic 30.0%
CAAGAAGAAAATAGAGAGAA+TGG - chr7.2:88098304-88098323 MS.gene043270:intron 30.0%
CTAGATCAAAATTGTTGACA+TGG + chr7.2:88098546-88098565 None:intergenic 30.0%
CTCTAAATATATGGTACCAA+CGG - chr7.2:88095665-88095684 MS.gene043270:intron 30.0%
CTTCTCGCTACAATTAAATA+AGG + chr7.2:88097280-88097299 None:intergenic 30.0%
GAAAATAGAGAGAATGGTTT+AGG - chr7.2:88098310-88098329 MS.gene043270:intron 30.0%
GAAGTTGAAGTTGAAGAAAA+AGG - chr7.2:88095738-88095757 MS.gene043270:intron 30.0%
GATGATATTGGTGTGAAATT+TGG + chr7.2:88098019-88098038 None:intergenic 30.0%
GGAAACAAGTTATTATGGTT+TGG + chr7.2:88097887-88097906 None:intergenic 30.0%
GTGTTCTTGATTGTTCAAAT+TGG + chr7.2:88097841-88097860 None:intergenic 30.0%
TAGGTTTAATTGGTTGAATC+GGG + chr7.2:88096926-88096945 None:intergenic 30.0%
TATATACCTGTTTCCTAACT+GGG + chr7.2:88096509-88096528 None:intergenic 30.0%
TCCATATCTTCTTTCTCTTT+AGG + chr7.2:88095621-88095640 None:intergenic 30.0%
TCTTCTTCATATGGTATAGT+TGG - chr7.2:88095094-88095113 MS.gene043270:CDS 30.0%
TGTTAACGATGTCAAAGAAA+CGG + chr7.2:88095455-88095474 None:intergenic 30.0%
TTGTTCCAAATGGATGATAT+TGG + chr7.2:88098031-88098050 None:intergenic 30.0%
! AACAAGTTATTATGGTTTGG+TGG + chr7.2:88097884-88097903 None:intergenic 30.0%
! CACAACAATTCTACATCTTT+TGG - chr7.2:88097773-88097792 MS.gene043270:intron 30.0%
! CGACCAATTTTTACGATATA+GGG + chr7.2:88095988-88096007 None:intergenic 30.0%
! CTCCTATGATTTTGAATTCT+AGG - chr7.2:88095320-88095339 MS.gene043270:intron 30.0%
! TCTTTCTCTTTAGGTTTGTT+AGG + chr7.2:88095612-88095631 None:intergenic 30.0%
!! AGCTATGTTTGATGATGATA+AGG + chr7.2:88097942-88097961 None:intergenic 30.0%
!! CTTTCTCTTTAGGTTTGTTA+GGG + chr7.2:88095611-88095630 None:intergenic 30.0%
!! GGAATGAAGAAATGTTGTTT+TGG + chr7.2:88097863-88097882 None:intergenic 30.0%
!! TCATAACCTAGTGTTTTTGT+CGG - chr7.2:88095253-88095272 MS.gene043270:CDS 30.0%
!! TTTAGACCATTGATTTGTGT+TGG + chr7.2:88097806-88097825 None:intergenic 30.0%
!! TTTGATGATGATAAGGATGA+AGG + chr7.2:88097935-88097954 None:intergenic 30.0%
!!! AAGTTTTGTTGTTGTTGTAG+AGG + chr7.2:88094628-88094647 None:intergenic 30.0%
AAATCAGATACTAACTCCGT+TGG + chr7.2:88095684-88095703 None:intergenic 35.0%
AAATGGTAAAGGATGCTTGA+AGG - chr7.2:88098396-88098415 MS.gene043270:intron 35.0%
AAATTGGTGAGGATTAGGAT+TGG + chr7.2:88094419-88094438 None:intergenic 35.0%
AACTCTCAACCTCTTAGAAT+CGG + chr7.2:88096868-88096887 None:intergenic 35.0%
AAGAAGAGTAGATCAAATGG+AGG - chr7.2:88097318-88097337 MS.gene043270:CDS 35.0%
AATGGTAAAGGATGCTTGAA+GGG - chr7.2:88098397-88098416 MS.gene043270:intron 35.0%
AGTCAGGTTAAAAGAGATAG+AGG - chr7.2:88097343-88097362 MS.gene043270:CDS 35.0%
ATCATACCGACAAAAACACT+AGG + chr7.2:88095262-88095281 None:intergenic 35.0%
ATGGAAGTTAACCTAAGTCT+TGG - chr7.2:88095636-88095655 MS.gene043270:intron 35.0%
CAAACTAAAATGTGCTACAG+AGG - chr7.2:88095347-88095366 MS.gene043270:intron 35.0%
CGTAAGAAGAGTAGATCAAA+TGG - chr7.2:88097315-88097334 MS.gene043270:CDS 35.0%
CTGCTCTTAGAAACAGAAAA+TGG + chr7.2:88098496-88098515 None:intergenic 35.0%
GAAACAGAAAATGGCAATGA+AGG + chr7.2:88098487-88098506 None:intergenic 35.0%
GAATTTAGAGGTCAATGAGT+TGG - chr7.2:88097402-88097421 MS.gene043270:CDS 35.0%
GCTATAACTGAATGAAGACT+TGG + chr7.2:88098235-88098254 None:intergenic 35.0%
GGTCCCTATATCGTAAAAAT+TGG - chr7.2:88095982-88096001 MS.gene043270:intron 35.0%
GTATATACCTGTTTCCTAAC+TGG + chr7.2:88096510-88096529 None:intergenic 35.0%
GTCAGGTTAAAAGAGATAGA+GGG - chr7.2:88097344-88097363 MS.gene043270:CDS 35.0%
TACTGAACAAGAGGTTACAA+AGG - chr7.2:88094387-88094406 MS.gene043270:CDS 35.0%
TAGAGTCTAATCCAAGACTT+AGG + chr7.2:88095650-88095669 None:intergenic 35.0%
TAGCTCAGAAGAATTACCAA+AGG - chr7.2:88095716-88095735 MS.gene043270:intron 35.0%
TATGGACAGAAGATAGCAAA+AGG - chr7.2:88096435-88096454 MS.gene043270:CDS 35.0%
TCACACCAATATCATCCATT+TGG - chr7.2:88098023-88098042 MS.gene043270:intron 35.0%
TCAGCCGTAAAAAAGTTTGT+AGG + chr7.2:88096020-88096039 None:intergenic 35.0%
TCAGGTTAAAAGAGATAGAG+GGG - chr7.2:88097345-88097364 MS.gene043270:CDS 35.0%
TCTTCAACTTCAACTTCCTT+TGG + chr7.2:88095735-88095754 None:intergenic 35.0%
TGTGAAATTTGGTTGTTGTG+TGG + chr7.2:88098008-88098027 None:intergenic 35.0%
TTGACATGGTTAACAATGGA+TGG + chr7.2:88098532-88098551 None:intergenic 35.0%
! AAGTCTAAGGTCAAGTTCAA+TGG + chr7.2:88097159-88097178 None:intergenic 35.0%
! AGTCTAAGGTCAAGTTCAAT+GGG + chr7.2:88097158-88097177 None:intergenic 35.0%
! GCGACCAATTTTTACGATAT+AGG + chr7.2:88095989-88096008 None:intergenic 35.0%
! TCAGGGTTGAATTTGAAACT+TGG - chr7.2:88098334-88098353 MS.gene043270:intron 35.0%
!! AAATGAGATAATTTGCTGCC+AGG + chr7.2:88097127-88097146 None:intergenic 35.0%
!! AGATGAATGATGGATGTCAA+TGG - chr7.2:88096406-88096425 MS.gene043270:CDS 35.0%
AAAATGTGCTACAGAGGAGA+TGG - chr7.2:88095353-88095372 MS.gene043270:intron 40.0%
AAATGTGCTACAGAGGAGAT+GGG - chr7.2:88095354-88095373 MS.gene043270:intron 40.0%
AAGGCAAAGTGACACAAACT+CGG + chr7.2:88095541-88095560 None:intergenic 40.0%
ACATGTCATCTGCACATCTT+TGG + chr7.2:88097601-88097620 None:intergenic 40.0%
ACCTTAGACTTTGTGAAGTG+GGG - chr7.2:88097168-88097187 MS.gene043270:CDS 40.0%
ACTCATTTGGACTTCTTCCA+AGG + chr7.2:88095560-88095579 None:intergenic 40.0%
AGAACGAATAGTGAGACCTT+TGG - chr7.2:88096736-88096755 MS.gene043270:intron 40.0%
AGCTAAATGTGATACTCCCA+CGG - chr7.2:88095857-88095876 MS.gene043270:intron 40.0%
ATAAGGATGAAGGAGAGGTT+AGG + chr7.2:88097925-88097944 None:intergenic 40.0%
ATGTCTTATCCCACTAAGTG+GGG + chr7.2:88097483-88097502 None:intergenic 40.0%
CAAGTTATCAAACCCCTTCA+AGG - chr7.2:88098167-88098186 MS.gene043270:intron 40.0%
CAGGTTAAAAGAGATAGAGG+GGG - chr7.2:88097346-88097365 MS.gene043270:CDS 40.0%
CATGTCTTATCCCACTAAGT+GGG + chr7.2:88097484-88097503 None:intergenic 40.0%
GACCTTAGACTTTGTGAAGT+GGG - chr7.2:88097167-88097186 MS.gene043270:CDS 40.0%
GATAACGTTACAACCATACC+TGG - chr7.2:88097106-88097125 MS.gene043270:CDS 40.0%
GGATGTCAATGGAGAAAGTA+TGG - chr7.2:88096417-88096436 MS.gene043270:CDS 40.0%
GTAGGACAAGGATCAAACAA+TGG - chr7.2:88098274-88098293 MS.gene043270:intron 40.0%
GTTAGGTCAAGAGTGATTGT+TGG + chr7.2:88097908-88097927 None:intergenic 40.0%
TAACCAACCAACAGACTTGT+CGG - chr7.2:88096898-88096917 MS.gene043270:intron 40.0%
TCTTCAATCTCTGAACTGCT+AGG + chr7.2:88094322-88094341 None:intergenic 40.0%
TCTTCTTACGACGACATCTA+CGG + chr7.2:88097305-88097324 None:intergenic 40.0%
TGACCTTAGACTTTGTGAAG+TGG - chr7.2:88097166-88097185 MS.gene043270:CDS 40.0%
TGATGATAAGGATGAAGGAG+AGG + chr7.2:88097930-88097949 None:intergenic 40.0%
TGATTGCTCTACTGAACAAG+AGG - chr7.2:88094378-88094397 MS.gene043270:CDS 40.0%
! ACTTGGTGAGTATCCTCAAA+TGG - chr7.2:88098351-88098370 MS.gene043270:intron 40.0%
! AGAGAGAATGGTTTAGGTTC+AGG - chr7.2:88098316-88098335 MS.gene043270:intron 40.0%
! CTGATGCTGTTACTTGAAGA+GGG + chr7.2:88097661-88097680 None:intergenic 40.0%
! GAAACTCTGACTCTTTTAGC+AGG + chr7.2:88095831-88095850 None:intergenic 40.0%
! GAGAGAATGGTTTAGGTTCA+GGG - chr7.2:88098317-88098336 MS.gene043270:intron 40.0%
!! AGATAATTTGCTGCCAGGTA+TGG + chr7.2:88097122-88097141 None:intergenic 40.0%
!! GGTTCTTCATCGATTTCTTC+TGG + chr7.2:88095519-88095538 None:intergenic 40.0%
!! TTAGCCTGTGAACTTGTTGT+TGG + chr7.2:88098445-88098464 None:intergenic 40.0%
AGATCAAATGGAGGAGAGTC+AGG - chr7.2:88097327-88097346 MS.gene043270:CDS 45.0%
AGCTGAAGTTGTGTATGCCA+TGG + chr7.2:88097684-88097703 None:intergenic 45.0%
AGGCAAAGTGACACAAACTC+GGG + chr7.2:88095540-88095559 None:intergenic 45.0%
CCACTTAGTGGGATAAGACA+TGG - chr7.2:88097482-88097501 MS.gene043270:CDS 45.0%
CCATGTCTTATCCCACTAAG+TGG + chr7.2:88097485-88097504 None:intergenic 45.0%
CCTTAGACTTTGTGAAGTGG+GGG - chr7.2:88097169-88097188 MS.gene043270:CDS 45.0%
CGATAGTATGCTCTTGGACA+TGG + chr7.2:88096465-88096484 None:intergenic 45.0%
CTTAGACTTTGTGAAGTGGG+GGG - chr7.2:88097170-88097189 MS.gene043270:CDS 45.0%
CTTCTTACGACGACATCTAC+GGG + chr7.2:88097304-88097323 None:intergenic 45.0%
GCAGCTTCAATGATGGTATC+AGG - chr7.2:88097704-88097723 MS.gene043270:intron 45.0%
GGACAAGGATCAAACAATGG+TGG - chr7.2:88098277-88098296 MS.gene043270:intron 45.0%
GGCAAACAATCTTCTGCAAG+CGG - chr7.2:88097191-88097210 MS.gene043270:CDS 45.0%
GTCACCAACAACAAGTTCAC+AGG - chr7.2:88098438-88098457 MS.gene043270:intron 45.0%
GTGCAACGATAGTATGCTCT+TGG + chr7.2:88096471-88096490 None:intergenic 45.0%
TCAAGTAACAGCATCAGCCA+TGG - chr7.2:88097664-88097683 MS.gene043270:intron 45.0%
TGCTTCGATCCGATTCTAAG+AGG - chr7.2:88096856-88096875 MS.gene043270:intron 45.0%
TTCAGCTGCAGCTTCAATGA+TGG - chr7.2:88097697-88097716 MS.gene043270:intron 45.0%
! GCTGATGCTGTTACTTGAAG+AGG + chr7.2:88097662-88097681 None:intergenic 45.0%
! GTTTCGTCGATTGTAGGACA+AGG - chr7.2:88098262-88098281 MS.gene043270:intron 45.0%
!! GAGTTTGTGTCACTTTGCCT+TGG - chr7.2:88095540-88095559 MS.gene043270:intron 45.0%
AACCCCTTCAAGGCAAGCTT+TGG - chr7.2:88098177-88098196 MS.gene043270:intron 50.0%
AGCATGCCCAGTTAGGAAAC+AGG - chr7.2:88096500-88096519 MS.gene043270:intron 50.0%
AGCCAAAGCTTGCCTTGAAG+GGG + chr7.2:88098182-88098201 None:intergenic 50.0%
CAGCCAAAGCTTGCCTTGAA+GGG + chr7.2:88098183-88098202 None:intergenic 50.0%
CCCCCACTTCACAAAGTCTA+AGG + chr7.2:88097172-88097191 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr7.2:88097479-88097498 None:intergenic 50.0%
GAACCGACAAGTCTGTTGGT+TGG + chr7.2:88096904-88096923 None:intergenic 50.0%
TCAGCCAAAGCTTGCCTTGA+AGG + chr7.2:88098184-88098203 None:intergenic 50.0%
TGTTTCCTAACTGGGCATGC+TGG + chr7.2:88096501-88096520 None:intergenic 50.0%
! GCTGCAGTTTCGTCGATTGT+AGG - chr7.2:88098256-88098275 MS.gene043270:intron 50.0%
ATGTAGCCGACCCCACTTAG+TGG - chr7.2:88097470-88097489 MS.gene043270:CDS 55.0%
TCGGGAACCGACAAGTCTGT+TGG + chr7.2:88096908-88096927 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr7.2:88097471-88097490 MS.gene043270:CDS 55.0%
TTGCACCAGCATGCCCAGTT+AGG - chr7.2:88096493-88096512 MS.gene043270:intron 55.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 88094301 88098585 88094301 ID=MS.gene043270
chr7.2 mRNA 88094301 88098585 88094301 ID=MS.gene043270.t1;Parent=MS.gene043270
chr7.2 exon 88098478 88098585 88098478 ID=MS.gene043270.t1.exon1;Parent=MS.gene043270.t1
chr7.2 CDS 88098478 88098585 88098478 ID=cds.MS.gene043270.t1;Parent=MS.gene043270.t1
chr7.2 exon 88097008 88097544 88097008 ID=MS.gene043270.t1.exon2;Parent=MS.gene043270.t1
chr7.2 CDS 88097008 88097544 88097008 ID=cds.MS.gene043270.t1;Parent=MS.gene043270.t1
chr7.2 exon 88096365 88096478 88096365 ID=MS.gene043270.t1.exon3;Parent=MS.gene043270.t1
chr7.2 CDS 88096365 88096478 88096365 ID=cds.MS.gene043270.t1;Parent=MS.gene043270.t1
chr7.2 exon 88094301 88095290 88094301 ID=MS.gene043270.t1.exon4;Parent=MS.gene043270.t1
chr7.2 CDS 88094301 88095290 88094301 ID=cds.MS.gene043270.t1;Parent=MS.gene043270.t1
Gene Sequence

>MS.gene043270

ATGTCAAAAATGTCGAGTCCTAGCAGTTCAGAGATTGAAGAGAAAAGAGTTACTTCAATTGTTCATGAAGTTGAAGTTGATTGCTCTACTGAACAAGAGGTTACAAAGGTACACACCAATCCTAATCCTCACCAATTTTTTTACTTCTTGTGCAACATCCAATTATTGTTCATGAATAGTATTCTTTGAATTATTGAATTTTTATTTTTTACTTTGATGCTTTGTTATTTATAAGGATTATGCATATGTAGCTTGAGTTTCATATCAATAGAAGATGAGCAATTACACTCTAGTTTGACACAAAAATGTGTTATAACAACAAAACCTCTACAACAACAACAAAACTTCTTTTCTAGTTTCAAATTTATTGATTATCTTTGAAATAGAGAGATTTTTTGTGTTTAGGAACAATATGACTGATTATTTATAGGATAATACTTATATGCTGTACAATATTGTTGTATGTGACATAGTTCAATGTAAATATTCATAACTATTTATAAAAGGGTTAAAAGTTATAATTGTCTTAAAAAAAATCATGTACATGTATTATTGTTTTTTTTTTTTGAGAGAAAGACGTGTATTATTGTTTTGTTCATATAGTATTGTGGTTCAATTTTGTCCTTGATAATCTTTTTATGGCGTTAAAAGTTATAATTGTCTTCAAACTTTTCATATGTGTTTGTTATAGTTTAATTCATATGATACTGTATGTAAGTTTTGTCCTTATTAAATCTTTTTATGACTTTAAAAGTTATAAATGTCTTAAAATTTTTCATATTCGAATGTTATTTCTTCTTCATATGGTATAGTTGGTAAATTTTGACATCATTAAACTTTTATTGCGTTAAAGTTTTTTTTATCCACGTGTTATATATATAATAATACACATAAGTTTTATCCTTATTAATCTTTTTAGGACATTAAAAAGTTATAATTGTCTAAAAGTTTTTCATAACCTAGTGTTTTTGTCGGTATGATATCGCAAAAAAGTTTTGTTTGCGTTAATATTATTAATACTCCTATGATTTTGAATTCTAGGAAGACAAACTAAAATGTGCTACAGAGGAGATGGGTGATGTGAAAGAAGAAAACGAAAGATTGAAGACGATGCTATCTCGAGTTGAAAAAGATTACAACTCACTTCAACTCCGTTTCTTTGACATCGTTAACAAAGACGTTTCTATGAAAGATATAGAAGATTCATCAACTTCACCAGAAGAAATCGATGAAGAACCCGAGTTTGTGTCACTTTGCCTTGGAAGAAGTCCAAATGAGTATAAGAAAGAAGAAAAAAACATTGAAAACCCTAACAAACCTAAAGAGAAAGAAGATATGGAAGTTAACCTAAGTCTTGGATTAGACTCTAAATATATGGTACCAACGGAGTTAGTATCTGATTTGAGTCCAATGAATAGCTCAGAAGAATTACCAAAGGAAGTTGAAGTTGAAGAAAAAGGAGCTATATTTTCAACAAATAAATCAACAAAAGTGATAAATGTAAATGATGAGATTTCAGAACTATTGCCTGCTAAAAGAGTCAGAGTTTCTGTGAGAGCTAAATGTGATACTCCCACGGTTAGTATCAATTAATTTGTTACATTACAAATTTACTATCTTGTATTCTAGGAAAATTTTATATTTACTACAAATATTATTTAGAGAAACTGAAATTTAATTCGGTCCCTATATCGTAAAAATTGGTCGCTATTTTAGCCTACAAACTTTTTTACGGCTGATTTAATGACTAATTACTAATAGAAGTTAAATTAACGACAAATTTAAAGCAAAATAAAGGGTAATATAGGGTAATATTTGTCTCTAATTTTCTCTCAAAAAAAAAAAATTTGTCTCTAATTTCGACGCTAAGTGTTATATATGTCGGTCTCTAAATTGTCTTTTTTTATTTTATTTTACGATCTCTAAAATCTTTTTAGTGGCCCAAAAATTTAAGTCTCTAAATTAGGTGTTAATGAAAGAGTTTTTTTTTTTTTTTTTTTATACTAAAACTAAATAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAGTAGTGGTTTCTTGTATATTTTTCTTGTATAATAGCTTATTTGTGTGACTTTCAAACAGATGAATGATGGATGTCAATGGAGAAAGTATGGACAGAAGATAGCAAAAGGAAATCCATGTCCAAGAGCATACTATCGTTGCACAGTTGCACCAGCATGCCCAGTTAGGAAACAGGTATATACATTACATATATGCATTATATGATTTAAATACATTGCTTCCTATAAAAAAAATTGACTAAATTTATGGTCTTTAAAAAAGATATTCATTTTTAGTCTCTATTTATTTAACAAGAGTAAAAAAATTTGTGGATTTTAGTCTTTCTTTAATCTCTTATTAGTGACTCAAACCACAATTTTTGTACTTAATGTTTTAAGAACTAGGTTGAAGAACGAATAGTGAGACCTTTGGATTATAGTTTAATTGGTTTAATCAATTGAATTATGCTTGAATCAGACGAATAATAAATAACTACAACAAATATATAAAAAAAGAAGTGAATTAATCGTGCTTCGATCCGATTCTAAGAGGTTGAGAGTTGATCACAGTTTAACCAACCAACAGACTTGTCGGTTCCCGATTCAACCAATTAAACCTATAAGTTCAAGAAATGCTATAAATATCTTACTTTCAAAAAAAAACCTATAAGTTCAAATATGAAACCACTGATATATTTTTTTGAAAGTAAGATATTTATAGCATTTCATTAATAATTGGTTGTTCAATACAATGAGGTATAATAAGTAATGGAACTAGCTGATAACGTTACAACCATACCTGGCAGCAAATTATCTCATTTGTTTGTCGCCCATTGAACTTGACCTTAGACTTTGTGAAGTGGGGGGCAAACAATCTTCTGCAAGCGGATAGAAAACACCGATATTTTGAAAGCAAAAAATGAACCGTATAAGCATAAAAAAAAATATTTACCTTATTTAATTGTAGCGAGAAGACCCGTAGATGTCGTCGTAAGAAGAGTAGATCAAATGGAGGAGAGTCAGGTTAAAAGAGATAGAGGGGGACCTAGAAAAACTATTAGAGAAACCATTATAAAGAATTTAGAGGTCAATGAGTTGGATCAAAATATGATTTATGATAGAACACTATGGCGTAATTTGATTCATGTAGCCGACCCCACTTAGTGGGATAAGACATGGTTGTTGTTATTGTTGATATTATTGTATAGAGATTTTAGTTATTGTTTCAAGATGTATAGTAAGAACACCCCAAAATTTTATATGATTTCAGGTCCAAAGATGTGCAGATGACATGTCCATCTTAATCACAACATATGAAGGAACACACAATCACCCTCTTCAAGTAACAGCATCAGCCATGGCATACACAACTTCAGCTGCAGCTTCAATGATGGTATCAGGTTCATCAACATCATCATCATCATCACATCAAAATCAAAATGTTCATCACAACAATTCTACATCTTTTGGAAATTCACCAACACAAATCAATGGTCTAAATTTCAATCATCACCAATTTGAACAATCAAGAACACCAAAACAACATTTCTTCATTCCACCAAACCATAATAACTTGTTTCCAACAATCACTCTTGACCTAACCTCTCCTTCATCCTTATCATCATCAAACATAGCTTCAAATGTTCCAAGATTTTCTCCAAATAATCTTAGTTTCTGTTCCACACAACAACCAAATTTCACACCAATATCATCCATTTGGAACAATAATAACAATAAATTAGGGTTTATTAACAATAACTCAAACCCTAATATTGAAAAAACTCAAGTTAGGCCTTTTAATCATTTCCAAGAAAATTTCTATCAAAATCAAAATTGCATGACAAGTTATCAAACCCCTTCAAGGCAAGCTTTGGCTGAAACAATAAGCAAAGCAATAAGCACTGATCCAAGTCTTCATTCAGTTATAGCTGCTGCAGTTTCGTCGATTGTAGGACAAGGATCAAACAATGGTGGAAAGCAAGAAGAAAATAGAGAGAATGGTTTAGGTTCAGGGTTGAATTTGAAACTTGGTGAGTATCCTCAAATGGTTTCAAACAATTTGTTGAATCAAAATGGTAAAGGATGCTTGAAGGGATCATACTTCAAAAGATTGTCACCAACAACAAGTTCACAGGCTAAAAATTTCATGCTTCTTCAACCTTCATTGCCATTTTCTGTTTCTAAGAGCAGTGCTAGTAAATCTCCATCCATTGTTAACCATGTCAACAATTTTGATCTAGATAAGAAGACACATAATTAG
Protein sequence

>MS.gene043270.t1

MSKMSSPSSSEIEEKRVTSIVHEVEVDCSTEQEVTKEDKLKCATEEMGDVKEENERLKTMLSRVEKDYNSLQLRFFDIVNKDVSMKDIEDSSTSPEEIDEEPEFVSLCLGRSPNEYKKEEKNIENPNKPKEKEDMEVNLSLGLDSKYMVPTELVSDLSPMNSSEELPKEVEVEEKGAIFSTNKSTKVINVNDEISELLPAKRVRVSVRAKCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPACPVRKQVQRCADDMSILITTYEGTHNHPLQVTASAMAYTTSAAASMMVSGSSTSSSSSHQNQNVHHNNSTSFGNSPTQINGLNFNHHQFEQSRTPKQHFFIPPNHNNLFPTITLDLTSPSSLSSSNIASNVPRFSPNNLSFCSTQQPNFTPISSIWNNNNNKLGFINNNSNPNIEKTQVRPFNHFQENFYQNQNCMTSYQTPSRQALAETISKAISTDPSLHSVIAAAVSSIVGQGSNNGGKQEENRENGLGSGLNLKLGEYPQMVSNNLLNQNGKGCLKGSYFKRLSPTTSSQAKNFMLLQPSLPFSVSKSSASKSPSIVNHVNNFDLDKKTHN