Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043318.t1 | XP_024632961.1 | 69.6 | 720 | 66 | 5 | 1 | 567 | 81 | 800 | 9.40E-276 | 959.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043318.t1 | Q9SZL8 | 24.9 | 543 | 281 | 10 | 21 | 460 | 119 | 637 | 1.0e-44 | 183.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043318.t1 | D3YBB9 | 64.1 | 699 | 110 | 4 | 2 | 559 | 114 | 812 | 6.6e-247 | 862.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene043318.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043318.t1 | MTR_0558s0020 | 87.446 | 231 | 29 | 0 | 1 | 231 | 66 | 296 | 1.42e-150 | 435 |
MS.gene043318.t1 | MTR_6g090505 | 82.278 | 237 | 42 | 0 | 1 | 237 | 1 | 237 | 4.06e-140 | 411 |
MS.gene043318.t1 | MTR_1g083640 | 89.216 | 204 | 22 | 0 | 1 | 204 | 81 | 284 | 2.50e-134 | 394 |
MS.gene043318.t1 | MTR_8g446020 | 85.854 | 205 | 29 | 0 | 27 | 231 | 52 | 256 | 1.20e-129 | 380 |
MS.gene043318.t1 | MTR_2g014100 | 86.047 | 172 | 24 | 0 | 1 | 172 | 74 | 245 | 2.57e-105 | 318 |
MS.gene043318.t1 | MTR_0337s0040 | 77.202 | 193 | 44 | 0 | 4 | 196 | 30 | 222 | 4.64e-104 | 314 |
MS.gene043318.t1 | MTR_1g055240 | 87.324 | 142 | 18 | 0 | 27 | 168 | 3 | 144 | 2.89e-86 | 265 |
MS.gene043318.t1 | MTR_0019s0290 | 81.579 | 152 | 28 | 0 | 18 | 169 | 9 | 160 | 1.47e-85 | 263 |
MS.gene043318.t1 | MTR_3g028680 | 81.013 | 158 | 27 | 1 | 413 | 567 | 1 | 158 | 1.14e-84 | 262 |
MS.gene043318.t1 | MTR_3g008240 | 86.232 | 138 | 19 | 0 | 1 | 138 | 66 | 203 | 1.23e-81 | 255 |
MS.gene043318.t1 | MTR_2g067090 | 78.710 | 155 | 30 | 1 | 416 | 567 | 99 | 253 | 3.00e-76 | 244 |
MS.gene043318.t1 | MTR_4g040430 | 83.333 | 138 | 19 | 1 | 1 | 138 | 65 | 198 | 5.30e-76 | 240 |
MS.gene043318.t1 | MTR_4g133495 | 64.088 | 181 | 39 | 2 | 371 | 548 | 88 | 245 | 2.51e-68 | 223 |
MS.gene043318.t1 | MTR_4g133340 | 64.088 | 181 | 39 | 2 | 371 | 548 | 88 | 245 | 2.51e-68 | 223 |
MS.gene043318.t1 | MTR_5g071590 | 78.846 | 104 | 22 | 0 | 1 | 104 | 78 | 181 | 4.89e-55 | 185 |
MS.gene043318.t1 | MTR_0337s0060 | 54.386 | 171 | 19 | 3 | 387 | 554 | 125 | 239 | 6.25e-43 | 154 |
MS.gene043318.t1 | MTR_6g051425 | 32.234 | 273 | 157 | 5 | 21 | 277 | 64 | 324 | 3.22e-35 | 136 |
MS.gene043318.t1 | MTR_1281s0010 | 79.365 | 63 | 13 | 0 | 1 | 63 | 47 | 109 | 6.38e-28 | 108 |
MS.gene043318.t1 | MTR_2g067130 | 62.963 | 81 | 24 | 2 | 490 | 567 | 46 | 123 | 7.25e-22 | 92.8 |
MS.gene043318.t1 | MTR_1g070355 | 25.604 | 207 | 140 | 2 | 21 | 227 | 119 | 311 | 2.10e-14 | 76.6 |
MS.gene043318.t1 | MTR_0337s0050 | 72.222 | 36 | 10 | 0 | 195 | 230 | 14 | 49 | 2.35e-13 | 65.9 |
MS.gene043318.t1 | MTR_0402s0040 | 27.119 | 118 | 85 | 1 | 52 | 169 | 89 | 205 | 1.45e-11 | 67.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043318.t1 | AT4G38180 | 28.649 | 370 | 233 | 6 | 21 | 376 | 119 | 471 | 8.01e-46 | 173 |
MS.gene043318.t1 | AT3G06250 | 29.545 | 264 | 163 | 5 | 135 | 385 | 295 | 548 | 4.45e-33 | 135 |
MS.gene043318.t1 | AT3G06250 | 29.545 | 264 | 163 | 5 | 135 | 385 | 295 | 548 | 4.45e-33 | 135 |
MS.gene043318.t1 | AT3G06250 | 29.545 | 264 | 163 | 5 | 135 | 385 | 295 | 548 | 4.45e-33 | 135 |
MS.gene043318.t1 | AT2G27110 | 27.273 | 330 | 205 | 7 | 63 | 376 | 108 | 418 | 5.08e-32 | 132 |
MS.gene043318.t1 | AT2G27110 | 31.250 | 128 | 77 | 4 | 387 | 514 | 518 | 634 | 6.21e-11 | 65.9 |
MS.gene043318.t1 | AT2G27110 | 27.273 | 330 | 205 | 7 | 63 | 376 | 108 | 418 | 5.08e-32 | 132 |
MS.gene043318.t1 | AT2G27110 | 31.250 | 128 | 77 | 4 | 387 | 514 | 518 | 634 | 6.21e-11 | 65.9 |
MS.gene043318.t1 | AT2G27110 | 30.579 | 242 | 150 | 3 | 149 | 376 | 36 | 273 | 7.11e-32 | 131 |
MS.gene043318.t1 | AT2G27110 | 31.250 | 128 | 77 | 4 | 387 | 514 | 373 | 489 | 6.01e-11 | 65.9 |
MS.gene043318.t1 | AT4G15090 | 26.126 | 333 | 225 | 6 | 59 | 376 | 121 | 447 | 2.10e-29 | 124 |
MS.gene043318.t1 | AT4G15090 | 31.788 | 151 | 86 | 3 | 386 | 536 | 545 | 678 | 2.26e-15 | 80.1 |
MS.gene043318.t1 | AT4G15090 | 26.126 | 333 | 225 | 6 | 59 | 376 | 121 | 447 | 2.10e-29 | 124 |
MS.gene043318.t1 | AT4G15090 | 31.788 | 151 | 86 | 3 | 386 | 536 | 545 | 678 | 2.26e-15 | 80.1 |
MS.gene043318.t1 | AT4G15090 | 26.126 | 333 | 225 | 6 | 59 | 376 | 121 | 447 | 2.10e-29 | 124 |
MS.gene043318.t1 | AT4G15090 | 31.788 | 151 | 86 | 3 | 386 | 536 | 545 | 678 | 2.26e-15 | 80.1 |
MS.gene043318.t1 | AT4G15090 | 26.126 | 333 | 225 | 6 | 59 | 376 | 121 | 447 | 2.10e-29 | 124 |
MS.gene043318.t1 | AT4G15090 | 31.788 | 151 | 86 | 3 | 386 | 536 | 545 | 678 | 2.26e-15 | 80.1 |
MS.gene043318.t1 | AT4G15090 | 26.126 | 333 | 225 | 6 | 59 | 376 | 121 | 447 | 2.10e-29 | 124 |
MS.gene043318.t1 | AT4G15090 | 31.788 | 151 | 86 | 3 | 386 | 536 | 545 | 678 | 2.26e-15 | 80.1 |
MS.gene043318.t1 | AT4G38170 | 30.769 | 221 | 130 | 6 | 171 | 376 | 24 | 236 | 9.20e-29 | 121 |
MS.gene043318.t1 | AT1G76320 | 25.946 | 370 | 224 | 11 | 21 | 372 | 43 | 380 | 5.88e-28 | 119 |
MS.gene043318.t1 | AT5G18960 | 28.253 | 269 | 168 | 7 | 134 | 387 | 316 | 574 | 6.41e-28 | 119 |
MS.gene043318.t1 | AT5G18960 | 28.253 | 269 | 168 | 7 | 134 | 387 | 316 | 574 | 6.41e-28 | 119 |
MS.gene043318.t1 | AT5G28530 | 25.799 | 407 | 238 | 13 | 8 | 379 | 90 | 467 | 6.48e-28 | 119 |
MS.gene043318.t1 | AT5G28530 | 25.799 | 407 | 238 | 13 | 8 | 379 | 90 | 467 | 6.48e-28 | 119 |
MS.gene043318.t1 | AT5G28530 | 25.799 | 407 | 238 | 13 | 8 | 379 | 90 | 467 | 7.43e-28 | 119 |
MS.gene043318.t1 | AT1G76320 | 25.946 | 370 | 224 | 11 | 21 | 372 | 43 | 380 | 7.80e-28 | 119 |
MS.gene043318.t1 | AT1G76320 | 25.000 | 368 | 230 | 9 | 21 | 372 | 43 | 380 | 8.27e-28 | 119 |
MS.gene043318.t1 | AT1G76320 | 25.000 | 368 | 230 | 9 | 21 | 372 | 43 | 380 | 8.27e-28 | 119 |
MS.gene043318.t1 | AT1G10240 | 26.816 | 358 | 226 | 13 | 43 | 375 | 102 | 448 | 7.54e-26 | 112 |
MS.gene043318.t1 | AT1G10240 | 26.816 | 358 | 226 | 13 | 43 | 375 | 102 | 448 | 7.54e-26 | 112 |
MS.gene043318.t1 | AT1G80010 | 25.485 | 412 | 246 | 16 | 2 | 387 | 124 | 500 | 5.09e-23 | 104 |
MS.gene043318.t1 | AT2G32250 | 24.156 | 385 | 210 | 10 | 5 | 372 | 68 | 387 | 6.00e-23 | 103 |
MS.gene043318.t1 | AT2G32250 | 23.958 | 384 | 212 | 9 | 5 | 372 | 27 | 346 | 7.72e-23 | 103 |
MS.gene043318.t1 | AT2G32250 | 23.958 | 384 | 212 | 9 | 5 | 372 | 27 | 346 | 8.05e-23 | 103 |
MS.gene043318.t1 | AT2G32250 | 23.958 | 384 | 212 | 9 | 5 | 372 | 68 | 387 | 8.34e-23 | 103 |
MS.gene043318.t1 | AT2G32250 | 23.958 | 384 | 212 | 9 | 5 | 372 | 68 | 387 | 8.34e-23 | 103 |
MS.gene043318.t1 | AT3G22170 | 24.490 | 245 | 167 | 3 | 146 | 376 | 216 | 456 | 8.36e-23 | 103 |
MS.gene043318.t1 | AT3G22170 | 24.490 | 245 | 167 | 3 | 146 | 376 | 216 | 456 | 8.36e-23 | 103 |
MS.gene043318.t1 | AT2G32250 | 23.958 | 384 | 212 | 9 | 5 | 372 | 68 | 387 | 9.37e-23 | 103 |
MS.gene043318.t1 | AT2G32250 | 23.958 | 384 | 212 | 9 | 5 | 372 | 68 | 387 | 9.37e-23 | 103 |
MS.gene043318.t1 | AT2G32250 | 23.958 | 384 | 212 | 9 | 5 | 372 | 68 | 387 | 9.37e-23 | 103 |
MS.gene043318.t1 | AT4G19990 | 27.426 | 237 | 153 | 5 | 155 | 376 | 106 | 338 | 4.56e-19 | 91.7 |
MS.gene043318.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 386 | 516 | 438 | 558 | 5.04e-13 | 72.4 |
MS.gene043318.t1 | AT4G19990 | 27.426 | 237 | 153 | 5 | 155 | 376 | 163 | 395 | 5.32e-19 | 91.7 |
MS.gene043318.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 386 | 516 | 495 | 615 | 6.04e-13 | 72.4 |
MS.gene043318.t1 | AT4G19990 | 27.426 | 237 | 153 | 5 | 155 | 376 | 177 | 409 | 5.42e-19 | 91.7 |
MS.gene043318.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 386 | 516 | 509 | 629 | 6.44e-13 | 72.4 |
MS.gene043318.t1 | AT4G19990 | 27.426 | 237 | 153 | 5 | 155 | 376 | 163 | 395 | 6.24e-19 | 91.7 |
MS.gene043318.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 386 | 516 | 495 | 615 | 5.79e-13 | 72.4 |
MS.gene043318.t1 | AT4G19990 | 27.426 | 237 | 153 | 5 | 155 | 376 | 163 | 395 | 6.24e-19 | 91.7 |
MS.gene043318.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 386 | 516 | 495 | 615 | 5.79e-13 | 72.4 |
MS.gene043318.t1 | AT4G19990 | 27.426 | 237 | 153 | 5 | 155 | 376 | 163 | 395 | 6.92e-19 | 91.3 |
MS.gene043318.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 386 | 516 | 495 | 615 | 6.42e-13 | 72.4 |
MS.gene043318.t1 | AT4G19990 | 27.426 | 237 | 153 | 5 | 155 | 376 | 163 | 395 | 6.92e-19 | 91.3 |
MS.gene043318.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 386 | 516 | 495 | 615 | 6.42e-13 | 72.4 |
MS.gene043318.t1 | AT1G52520 | 22.656 | 384 | 252 | 9 | 2 | 372 | 112 | 463 | 1.78e-18 | 90.1 |
Find 87 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 2.2:+10676261 | MS.gene043318:CDS |
AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 2.2:-10677396 | None:intergenic |
TACATTTCAGCTGCCTTTCT+TGG | 0.197151 | 2.2:+10675980 | MS.gene043318:intron |
CAACAAGATTATGCTCTATT+TGG | 0.198611 | 2.2:+10675457 | MS.gene043318:CDS |
CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 2.2:+10676013 | MS.gene043318:CDS |
TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 2.2:-10676107 | None:intergenic |
TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 2.2:-10677390 | None:intergenic |
AATCAGATTTCGACTACAAT+TGG | 0.318540 | 2.2:+10676302 | MS.gene043318:CDS |
TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 2.2:+10677242 | MS.gene043318:CDS |
ACCAGCCTGGTCTGTGTATA+TGG | 0.341000 | 2.2:-10676125 | None:intergenic |
GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 2.2:-10675507 | None:intergenic |
GTCTTTAGTGCCAACATTCA+TGG | 0.367086 | 2.2:-10677118 | None:intergenic |
TATGCATTGGTCTTCAGTTT+GGG | 0.370760 | 2.2:+10676402 | MS.gene043318:CDS |
CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 2.2:+10677234 | MS.gene043318:CDS |
AACAATAAATATCGGCCATT+AGG | 0.388497 | 2.2:+10675514 | MS.gene043318:CDS |
ACCGAACAAACAATAAATAT+CGG | 0.389395 | 2.2:+10675506 | MS.gene043318:CDS |
GTATGCATTGGTCTTCAGTT+TGG | 0.392120 | 2.2:+10676401 | MS.gene043318:CDS |
TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 2.2:-10674977 | None:intergenic |
AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 2.2:+10677382 | MS.gene043318:CDS |
TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 2.2:-10677372 | None:intergenic |
CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 2.2:+10676950 | MS.gene043318:CDS |
GATTATGATCTTCAAACCTT+GGG | 0.413114 | 2.2:-10676873 | None:intergenic |
GGGTTGTCACAGTCGACATT+AGG | 0.419786 | 2.2:+10676908 | MS.gene043318:CDS |
CGATTATGATCTTCAAACCT+TGG | 0.425681 | 2.2:-10676874 | None:intergenic |
GAGGAGTTTCTTATATCTAA+AGG | 0.432555 | 2.2:+10677267 | MS.gene043318:CDS |
AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 2.2:+10675036 | MS.gene043318:CDS |
CAAGAAGTAAATGAAGTTCA+AGG | 0.439524 | 2.2:+10675154 | MS.gene043318:CDS |
TGAATGTCTATAAGATATAT+AGG | 0.445219 | 2.2:+10675068 | MS.gene043318:CDS |
TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 2.2:-10676118 | None:intergenic |
GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 2.2:+10675019 | MS.gene043318:CDS |
CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 2.2:-10677051 | None:intergenic |
GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 2.2:+10675184 | MS.gene043318:CDS |
TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 2.2:+10676192 | MS.gene043318:CDS |
CTCAAGTAGCGCAAATGCTC+TGG | 0.460440 | 2.2:-10675124 | None:intergenic |
ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 2.2:+10676951 | MS.gene043318:CDS |
GGCCTACTTCAGACTTTAAG+TGG | 0.462107 | 2.2:+10676356 | MS.gene043318:CDS |
CGCAAACACGTGTAGAAAGC+TGG | 0.465682 | 2.2:-10677185 | None:intergenic |
ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 2.2:+10674868 | MS.gene043318:CDS |
GAAGTGATGGGTCAAGGAGT+TGG | 0.484292 | 2.2:+10675229 | MS.gene043318:CDS |
TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 2.2:-10675013 | None:intergenic |
CTGTCTGTGAACTATCTGTT+GGG | 0.486691 | 2.2:+10677343 | MS.gene043318:CDS |
TCTAATGACGACTCGTCAAA+AGG | 0.488508 | 2.2:+10675297 | MS.gene043318:CDS |
CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 2.2:+10674862 | MS.gene043318:CDS |
ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 2.2:-10675993 | None:intergenic |
ATCAGATTTCGACTACAATT+GGG | 0.491708 | 2.2:+10676303 | MS.gene043318:CDS |
CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 2.2:+10675310 | MS.gene043318:CDS |
GAGAACATCTTATGAAGTGA+TGG | 0.499875 | 2.2:+10675216 | MS.gene043318:CDS |
TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 2.2:-10675402 | None:intergenic |
CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 2.2:+10676389 | MS.gene043318:CDS |
ATCATAATCGACTTGATGAA+AGG | 0.507955 | 2.2:+10676887 | MS.gene043318:CDS |
TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 2.2:-10675268 | None:intergenic |
ATTGGTCTTCAGTTTGGGTG+AGG | 0.509410 | 2.2:+10676407 | MS.gene043318:CDS |
TGTCTATAAGATATATAGGT+GGG | 0.523740 | 2.2:+10675072 | MS.gene043318:CDS |
TCATAATCGACTTGATGAAA+GGG | 0.526860 | 2.2:+10676888 | MS.gene043318:CDS |
CTGAAATCTACCATGAATGT+TGG | 0.534154 | 2.2:+10677108 | MS.gene043318:CDS |
TAACAAAGAAGGTTTCAAGA+AGG | 0.538422 | 2.2:+10674913 | MS.gene043318:CDS |
GCTGTCTGTGAACTATCTGT+TGG | 0.540392 | 2.2:+10677342 | MS.gene043318:CDS |
TGTTATGCTTGTAACAAAGA+AGG | 0.541604 | 2.2:+10674902 | MS.gene043318:CDS |
AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 2.2:+10674914 | MS.gene043318:CDS |
AAATGCTCTGGTTTATGTAA+TGG | 0.552634 | 2.2:-10675112 | None:intergenic |
ACTTCAACAACGCACCAGCC+TGG | 0.557139 | 2.2:-10676138 | None:intergenic |
AATGAAGCTCTCTCGAAACC+AGG | 0.565261 | 2.2:+10675364 | MS.gene043318:CDS |
GTGATGGGTCAAGGAGTTGG+AGG | 0.568802 | 2.2:+10675232 | MS.gene043318:CDS |
TACACGTGTTTGCGCAGATG+CGG | 0.571672 | 2.2:+10677194 | MS.gene043318:CDS |
TCTTATGAAGTGATGGGTCA+AGG | 0.589029 | 2.2:+10675223 | MS.gene043318:CDS |
TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 2.2:+10677235 | MS.gene043318:CDS |
ACCATATACACAGACCAGGC+TGG | 0.590176 | 2.2:+10676124 | MS.gene043318:CDS |
ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 2.2:+10677230 | MS.gene043318:CDS |
GAATGAATTCAAGGAATGAG+TGG | 0.593229 | 2.2:-10677937 | None:intergenic |
TGAAGACTTAGAAGGCGTAA+CGG | 0.598405 | 2.2:-10677310 | None:intergenic |
TTGATATCGTTGTGCTTGAG+TGG | 0.601464 | 2.2:-10677142 | None:intergenic |
AGAACATCTTATGAAGTGAT+GGG | 0.601988 | 2.2:+10675217 | MS.gene043318:CDS |
GACGACTCGTCAAAAGGAGA+TGG | 0.604288 | 2.2:+10675303 | MS.gene043318:CDS |
ACGTGTTTGCGCAGATGCGG+AGG | 0.605934 | 2.2:+10677197 | MS.gene043318:CDS |
GACTCGTCAAAAGGAGATGG+TGG | 0.611157 | 2.2:+10675306 | MS.gene043318:CDS |
AGCCACTTAAAGTCTGAAGT+AGG | 0.617789 | 2.2:-10676358 | None:intergenic |
AGAACTGGACTGTCACATGT+TGG | 0.620791 | 2.2:-10674962 | None:intergenic |
GGGTCAAGGAGTTGGAGGCA+CGG | 0.621882 | 2.2:+10675237 | MS.gene043318:CDS |
ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 2.2:-10676872 | None:intergenic |
GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 2.2:+10676193 | MS.gene043318:CDS |
ATGTCTATAAGATATATAGG+TGG | 0.643489 | 2.2:+10675071 | MS.gene043318:CDS |
GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 2.2:-10677093 | None:intergenic |
GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 2.2:+10677219 | MS.gene043318:CDS |
CATGTCGACATAAGAAACCC+CGG | 0.663279 | 2.2:-10676969 | None:intergenic |
TCAAACCATATACACAGACC+AGG | 0.671057 | 2.2:+10676120 | MS.gene043318:CDS |
TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 2.2:+10676952 | MS.gene043318:CDS |
GTCAATTCTGATGTAATGCG+CGG | 0.734639 | 2.2:+10677883 | MS.gene043318:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ACGTATTTATTATTATATTT+TGG | + | chr2.2:10677693-10677712 | MS.gene043318:intron | 10.0% |
!!! | TGTTTTTTATGTTATAAGTT+AGG | + | chr2.2:10677522-10677541 | MS.gene043318:intron | 15.0% |
!! | AAACCAAATTAACAATCTAA+TGG | - | chr2.2:10677726-10677745 | None:intergenic | 20.0% |
!! | AAACCATAATTATGGTTTAA+TGG | - | chr2.2:10677769-10677788 | None:intergenic | 20.0% |
!! | AAACCATTAAACCATAATTA+TGG | + | chr2.2:10677763-10677782 | MS.gene043318:intron | 20.0% |
!! | AAACCATTAGATTGTTAATT+TGG | + | chr2.2:10677720-10677739 | MS.gene043318:intron | 20.0% |
!! | AATTCTTGATTGTTATGTAT+TGG | + | chr2.2:10677620-10677639 | MS.gene043318:intron | 20.0% |
!! | CAATTCACAAAATAAGAAAT+CGG | + | chr2.2:10674862-10674881 | MS.gene043318:CDS | 20.0% |
!! | TCTTAACTAAACCATAATTA+TGG | - | chr2.2:10677777-10677796 | None:intergenic | 20.0% |
!! | TGAATGTCTATAAGATATAT+AGG | + | chr2.2:10675068-10675087 | MS.gene043318:CDS | 20.0% |
!!! | AATTTAATGTTCTGGTTTAT+TGG | + | chr2.2:10675689-10675708 | MS.gene043318:intron | 20.0% |
!!! | ATGATGAAAAACTGTTTTAA+TGG | + | chr2.2:10676331-10676350 | MS.gene043318:CDS | 20.0% |
!!! | TGAATGTTTATATTGATTGA+AGG | + | chr2.2:10675661-10675680 | MS.gene043318:intron | 20.0% |
! | AAAACACCTTGAAAAACATT+CGG | - | chr2.2:10676169-10676188 | None:intergenic | 25.0% |
! | AAAGTGATTATGAAAAAGCT+AGG | + | chr2.2:10677421-10677440 | MS.gene043318:intron | 25.0% |
! | AAGTGATTATGAAAAAGCTA+GGG | + | chr2.2:10677422-10677441 | MS.gene043318:intron | 25.0% |
! | ACAAAATAAGAAATCGGATA+AGG | + | chr2.2:10674868-10674887 | MS.gene043318:CDS | 25.0% |
! | ACCGAACAAACAATAAATAT+CGG | + | chr2.2:10675506-10675525 | MS.gene043318:CDS | 25.0% |
! | AGTACAAAATACTAACCTAA+TGG | - | chr2.2:10675532-10675551 | None:intergenic | 25.0% |
! | ATGTCTATAAGATATATAGG+TGG | + | chr2.2:10675071-10675090 | MS.gene043318:CDS | 25.0% |
! | CAAAATAGTATTTGAAGGAA+AGG | - | chr2.2:10676702-10676721 | None:intergenic | 25.0% |
! | CTTTAGTCATTTCAACATTA+TGG | + | chr2.2:10676528-10676547 | MS.gene043318:intron | 25.0% |
! | TGAAATTTGAATGAATGTTC+TGG | + | chr2.2:10675579-10675598 | MS.gene043318:intron | 25.0% |
! | TGAATAAATGAAAAGCAAGA+TGG | - | chr2.2:10676667-10676686 | None:intergenic | 25.0% |
! | TGTCTATAAGATATATAGGT+GGG | + | chr2.2:10675072-10675091 | MS.gene043318:CDS | 25.0% |
! | TTTCGATGAGTTAACTAATT+TGG | + | chr2.2:10676261-10676280 | MS.gene043318:CDS | 25.0% |
!! | AGGTTTAGAATTTAATGTTC+TGG | + | chr2.2:10675681-10675700 | MS.gene043318:intron | 25.0% |
!! | ATTTTCAATTCTGAGTTAAG+TGG | + | chr2.2:10677796-10677815 | MS.gene043318:intron | 25.0% |
!! | CAAAGTTTTTACAATTGAGA+AGG | + | chr2.2:10676762-10676781 | MS.gene043318:intron | 25.0% |
!! | CTATACATTTTCACATTTGT+TGG | + | chr2.2:10677665-10677684 | MS.gene043318:intron | 25.0% |
!! | TGTTGTATTTTGTTCTGATT+TGG | + | chr2.2:10675951-10675970 | MS.gene043318:intron | 25.0% |
!! | TTCCTTCAAATACTATTTTG+AGG | + | chr2.2:10676702-10676721 | MS.gene043318:intron | 25.0% |
!! | TTGGTTTGAATATTATCTTC+TGG | + | chr2.2:10677639-10677658 | MS.gene043318:intron | 25.0% |
!!! | AAGACATAGCTAGTATTTTT+TGG | + | chr2.2:10675419-10675438 | MS.gene043318:CDS | 25.0% |
!!! | AGACATAGCTAGTATTTTTT+GGG | + | chr2.2:10675420-10675439 | MS.gene043318:CDS | 25.0% |
!!! | ATGTTGATAATGATAATGAG+AGG | + | chr2.2:10676803-10676822 | MS.gene043318:intron | 25.0% |
!!! | CTTATTTTGTGAATTGTTCT+TGG | - | chr2.2:10674858-10674877 | None:intergenic | 25.0% |
!!! | GCTTTAATAAATTCTAAAGC+TGG | + | chr2.2:10675184-10675203 | MS.gene043318:CDS | 25.0% |
!!! | TGAAAAACTGTTTTAATGGA+AGG | + | chr2.2:10676335-10676354 | MS.gene043318:CDS | 25.0% |
!!! | TGTTGATAATGATAATGAGA+GGG | + | chr2.2:10676804-10676823 | MS.gene043318:intron | 25.0% |
AAACACATATGATCTTTCCA+TGG | - | chr2.2:10675752-10675771 | None:intergenic | 30.0% | |
AACAAAGAAGGTTTCAAGAA+GGG | + | chr2.2:10674914-10674933 | MS.gene043318:CDS | 30.0% | |
AACAATAAATATCGGCCATT+AGG | + | chr2.2:10675514-10675533 | MS.gene043318:CDS | 30.0% | |
AAGAAAGACCAAATCCAATT+AGG | + | chr2.2:10677382-10677401 | MS.gene043318:CDS | 30.0% | |
AATCAGATTTCGACTACAAT+TGG | + | chr2.2:10676302-10676321 | MS.gene043318:CDS | 30.0% | |
AGAACATCTTATGAAGTGAT+GGG | + | chr2.2:10675217-10675236 | MS.gene043318:CDS | 30.0% | |
ATAAGTTAGGAAAGATGATG+AGG | + | chr2.2:10677535-10677554 | MS.gene043318:intron | 30.0% | |
ATCAGATTTCGACTACAATT+GGG | + | chr2.2:10676303-10676322 | MS.gene043318:CDS | 30.0% | |
ATGATTGTCAAAACCAAGAA+AGG | - | chr2.2:10675996-10676015 | None:intergenic | 30.0% | |
ATTATGATCTTCAAACCTTG+GGG | - | chr2.2:10676875-10676894 | None:intergenic | 30.0% | |
CAACAAGATTATGCTCTATT+TGG | + | chr2.2:10675457-10675476 | MS.gene043318:CDS | 30.0% | |
CAAGAAGTAAATGAAGTTCA+AGG | + | chr2.2:10675154-10675173 | MS.gene043318:CDS | 30.0% | |
CACAAATTCTAAGTCAAGAT+AGG | - | chr2.2:10675719-10675738 | None:intergenic | 30.0% | |
CTCCTCAAAATAGTATTTGA+AGG | - | chr2.2:10676707-10676726 | None:intergenic | 30.0% | |
CTGGTATATGTGTGTTAATT+TGG | + | chr2.2:10675618-10675637 | MS.gene043318:intron | 30.0% | |
GAGAATGCAAAGAAAAATCT+CGG | + | chr2.2:10676217-10676236 | MS.gene043318:CDS | 30.0% | |
GAGGAGTTTCTTATATCTAA+AGG | + | chr2.2:10677267-10677286 | MS.gene043318:CDS | 30.0% | |
GATTATGATCTTCAAACCTT+GGG | - | chr2.2:10676876-10676895 | None:intergenic | 30.0% | |
GCCGATATTTATTGTTTGTT+CGG | - | chr2.2:10675510-10675529 | None:intergenic | 30.0% | |
GTCTGCTTAATCCTAAAAAT+AGG | + | chr2.2:10674939-10674958 | MS.gene043318:CDS | 30.0% | |
TAAAGAAAAACCAGAGGAAA+GGG | + | chr2.2:10675003-10675022 | MS.gene043318:CDS | 30.0% | |
TAAAGAATCGAACAAGTGAA+TGG | - | chr2.2:10676513-10676532 | None:intergenic | 30.0% | |
TAACAAAGAAGGTTTCAAGA+AGG | + | chr2.2:10674913-10674932 | MS.gene043318:CDS | 30.0% | |
TGGATATCATAGTAAAAACC+TGG | - | chr2.2:10675385-10675404 | None:intergenic | 30.0% | |
TGGTGTATACTTGTTTACTA+CGG | - | chr2.2:10676647-10676666 | None:intergenic | 30.0% | |
TGTTATGCTTGTAACAAAGA+AGG | + | chr2.2:10674902-10674921 | MS.gene043318:CDS | 30.0% | |
TTCTTTGACCTAATTGGATT+TGG | - | chr2.2:10677393-10677412 | None:intergenic | 30.0% | |
TTTAAGTCCGAAAATCGAAA+AGG | - | chr2.2:10675271-10675290 | None:intergenic | 30.0% | |
TTTCTATTTACACAGCACAA+TGG | + | chr2.2:10675910-10675929 | MS.gene043318:intron | 30.0% | |
! | AAATGCTCTGGTTTATGTAA+TGG | - | chr2.2:10675115-10675134 | None:intergenic | 30.0% |
! | AGCTGGAATATATTTGAAGT+TGG | + | chr2.2:10675036-10675055 | MS.gene043318:CDS | 30.0% |
! | GAATCTTCCTTTTCGATTTT+CGG | + | chr2.2:10675261-10675280 | MS.gene043318:CDS | 30.0% |
! | GCATCTGAAATATTTCTCAA+CGG | + | chr2.2:10677219-10677238 | MS.gene043318:CDS | 30.0% |
! | GGTTTCAAATGTTGATGTTT+TGG | + | chr2.2:10676825-10676844 | MS.gene043318:intron | 30.0% |
! | TATGGTTTGAGGTTTCTTAT+TGG | - | chr2.2:10676110-10676129 | None:intergenic | 30.0% |
! | TCAATTCCGAATGTTTTTCA+AGG | + | chr2.2:10676160-10676179 | MS.gene043318:intron | 30.0% |
! | TTTGGTCTTTCTTTGAACTT+TGG | - | chr2.2:10677375-10677394 | None:intergenic | 30.0% |
!! | ATCATAATCGACTTGATGAA+AGG | + | chr2.2:10676887-10676906 | MS.gene043318:CDS | 30.0% |
!! | ATGTTCTGGTTTAGAATTGA+AGG | + | chr2.2:10675593-10675612 | MS.gene043318:intron | 30.0% |
!! | CTTCAAATACTATTTTGAGG+AGG | + | chr2.2:10676705-10676724 | MS.gene043318:intron | 30.0% |
!! | TCATAATCGACTTGATGAAA+GGG | + | chr2.2:10676888-10676907 | MS.gene043318:CDS | 30.0% |
!! | TCGACATGTTTTCAAGATTT+TGG | + | chr2.2:10676984-10677003 | MS.gene043318:CDS | 30.0% |
!!! | CTGCACAATATGTTTTAAAG+CGG | + | chr2.2:10677052-10677071 | MS.gene043318:CDS | 30.0% |
!!! | GTTTTTCAAGGTGTTTTTCA+TGG | + | chr2.2:10676172-10676191 | MS.gene043318:intron | 30.0% |
!!! | TTCAAGATTTTGGAGTTCTT+AGG | + | chr2.2:10676994-10677013 | MS.gene043318:CDS | 30.0% |
ACATTATGGTTCAGAGAATG+AGG | + | chr2.2:10676542-10676561 | MS.gene043318:intron | 35.0% | |
CATTATGGTTCAGAGAATGA+GGG | + | chr2.2:10676543-10676562 | MS.gene043318:intron | 35.0% | |
CGATTATGATCTTCAAACCT+TGG | - | chr2.2:10676877-10676896 | None:intergenic | 35.0% | |
CTAAAGAAAAACCAGAGGAA+AGG | + | chr2.2:10675002-10675021 | MS.gene043318:CDS | 35.0% | |
CTCATTCAAATCGTATGCAT+TGG | + | chr2.2:10676389-10676408 | MS.gene043318:CDS | 35.0% | |
CTGAAATCTACCATGAATGT+TGG | + | chr2.2:10677108-10677127 | MS.gene043318:CDS | 35.0% | |
GAAAGCTAAAGAAAAACCAG+AGG | + | chr2.2:10674997-10675016 | MS.gene043318:CDS | 35.0% | |
GAAGCAAAAGAAAGATGATG+AGG | + | chr2.2:10677473-10677492 | MS.gene043318:intron | 35.0% | |
GACAGAAATTCCTTATAGCT+CGG | + | chr2.2:10677448-10677467 | MS.gene043318:intron | 35.0% | |
GAGAACATCTTATGAAGTGA+TGG | + | chr2.2:10675216-10675235 | MS.gene043318:CDS | 35.0% | |
TTCTCATACTCAACAAGAAC+TGG | - | chr2.2:10674980-10674999 | None:intergenic | 35.0% | |
! | CATCGTAAGAGTGTGTTATT+TGG | + | chr2.2:10676013-10676032 | MS.gene043318:CDS | 35.0% |
! | TCTTTCAATGCTTTTCTTCG+TGG | + | chr2.2:10676472-10676491 | MS.gene043318:intron | 35.0% |
! | TGAGGCTTTGACAATTTAAG+CGG | + | chr2.2:10677491-10677510 | MS.gene043318:intron | 35.0% |
! | TTTTTCATGGTCTTTGCTCA+TGG | + | chr2.2:10676185-10676204 | MS.gene043318:CDS | 35.0% |
!! | ACTGCTTTTGAAGACTTAGA+AGG | - | chr2.2:10677321-10677340 | None:intergenic | 35.0% |
!! | CGCTTTAAAACATATTGTGC+AGG | - | chr2.2:10677054-10677073 | None:intergenic | 35.0% |
!! | TATGCATTGGTCTTCAGTTT+GGG | + | chr2.2:10676402-10676421 | MS.gene043318:CDS | 35.0% |
!! | TCACATGTTGGCCTATTTTT+AGG | - | chr2.2:10674953-10674972 | None:intergenic | 35.0% |
!!! | AAGATTTTGGAGTTCTTAGG+TGG | + | chr2.2:10676997-10677016 | MS.gene043318:CDS | 35.0% |
!!! | AGACATCAGCTACTTTTGAT+TGG | + | chr2.2:10676056-10676075 | MS.gene043318:CDS | 35.0% |
!!! | CACAATATGTTTTAAAGCGG+TGG | + | chr2.2:10677055-10677074 | MS.gene043318:CDS | 35.0% |
AATCGAACAAGTGAATGGTC+TGG | - | chr2.2:10676508-10676527 | None:intergenic | 40.0% | |
ACCTATGATCTTTGCATAGC+TGG | - | chr2.2:10675850-10675869 | None:intergenic | 40.0% | |
AGTCGCTTCTTTGACCTAAT+TGG | - | chr2.2:10677399-10677418 | None:intergenic | 40.0% | |
ATGTCGTATGTTTGAGAACC+GGG | + | chr2.2:10676951-10676970 | MS.gene043318:CDS | 40.0% | |
ATTTCTCAACGGTGTTCTTG+AGG | + | chr2.2:10677230-10677249 | MS.gene043318:CDS | 40.0% | |
CATGTCGTATGTTTGAGAAC+CGG | + | chr2.2:10676950-10676969 | MS.gene043318:CDS | 40.0% | |
CTGTCTGTGAACTATCTGTT+GGG | + | chr2.2:10677343-10677362 | MS.gene043318:CDS | 40.0% | |
GATTTCAGCTTATCGACAGA+CGG | - | chr2.2:10677096-10677115 | None:intergenic | 40.0% | |
GTCAATTCTGATGTAATGCG+CGG | + | chr2.2:10677883-10677902 | MS.gene043318:CDS | 40.0% | |
GTCTTTAGTGCCAACATTCA+TGG | - | chr2.2:10677121-10677140 | None:intergenic | 40.0% | |
TACATTTCAGCTGCCTTTCT+TGG | + | chr2.2:10675980-10675999 | MS.gene043318:intron | 40.0% | |
TCAAACCATATACACAGACC+AGG | + | chr2.2:10676120-10676139 | MS.gene043318:CDS | 40.0% | |
TCCAGCTATGCAAAGATCAT+AGG | + | chr2.2:10675846-10675865 | MS.gene043318:intron | 40.0% | |
TCTAATGACGACTCGTCAAA+AGG | + | chr2.2:10675297-10675316 | MS.gene043318:CDS | 40.0% | |
TGGTCTGTGTATATGGTTTG+AGG | - | chr2.2:10676121-10676140 | None:intergenic | 40.0% | |
TTGAGGAGGACACAACAAAA+GGG | + | chr2.2:10676719-10676738 | MS.gene043318:intron | 40.0% | |
TTGATATCGTTGTGCTTGAG+TGG | - | chr2.2:10677145-10677164 | None:intergenic | 40.0% | |
TTTGAGGAGGACACAACAAA+AGG | + | chr2.2:10676718-10676737 | MS.gene043318:intron | 40.0% | |
TTTGCTTCTTCCGAGCTATA+AGG | - | chr2.2:10677461-10677480 | None:intergenic | 40.0% | |
! | AGCCACTTAAAGTCTGAAGT+AGG | - | chr2.2:10676361-10676380 | None:intergenic | 40.0% |
! | GAGGCTTTGACAATTTAAGC+GGG | + | chr2.2:10677492-10677511 | MS.gene043318:intron | 40.0% |
! | GAGGGATAATCATGCTGATT+TGG | + | chr2.2:10676561-10676580 | MS.gene043318:intron | 40.0% |
! | TGAAGACTTAGAAGGCGTAA+CGG | - | chr2.2:10677313-10677332 | None:intergenic | 40.0% |
! | TGGTTTAGAATTGAAGGCTC+TGG | + | chr2.2:10675599-10675618 | MS.gene043318:intron | 40.0% |
! | TTGAAGGAAACTTTTCCCCA+AGG | + | chr2.2:10676857-10676876 | MS.gene043318:CDS | 40.0% |
!! | GTATGCATTGGTCTTCAGTT+TGG | + | chr2.2:10676401-10676420 | MS.gene043318:CDS | 40.0% |
!! | GTTTTGGATGCAGAACTTGA+AGG | + | chr2.2:10676841-10676860 | MS.gene043318:intron | 40.0% |
!! | TCATGCTGATTTGGACTTCA+AGG | + | chr2.2:10676570-10676589 | MS.gene043318:intron | 40.0% |
!! | TCTTATGAAGTGATGGGTCA+AGG | + | chr2.2:10675223-10675242 | MS.gene043318:CDS | 40.0% |
!!! | GCTAGTATTTTTTGGGCAGA+TGG | + | chr2.2:10675427-10675446 | MS.gene043318:CDS | 40.0% |
AATGAAGCTCTCTCGAAACC+AGG | + | chr2.2:10675364-10675383 | MS.gene043318:CDS | 45.0% | |
AGAACTGGACTGTCACATGT+TGG | - | chr2.2:10674965-10674984 | None:intergenic | 45.0% | |
ATCCCAACAGTCAGCTTATG+CGG | + | chr2.2:10676620-10676639 | MS.gene043318:intron | 45.0% | |
ATTTGTGCTCTGTACAGCCA+TGG | + | chr2.2:10675732-10675751 | MS.gene043318:intron | 45.0% | |
CATGTCGACATAAGAAACCC+CGG | - | chr2.2:10676972-10676991 | None:intergenic | 45.0% | |
GAAAAACCAGAGGAAAGGGT+TGG | + | chr2.2:10675007-10675026 | MS.gene043318:CDS | 45.0% | |
GCTGTCTGTGAACTATCTGT+TGG | + | chr2.2:10677342-10677361 | MS.gene043318:CDS | 45.0% | |
GGCCTACTTCAGACTTTAAG+TGG | + | chr2.2:10676356-10676375 | MS.gene043318:CDS | 45.0% | |
TGTCGTATGTTTGAGAACCG+GGG | + | chr2.2:10676952-10676971 | MS.gene043318:CDS | 45.0% | |
TGTCTTCTGCAGCATCAACT+TGG | - | chr2.2:10675405-10675424 | None:intergenic | 45.0% | |
TGTTCTTGAGGCAGGGAAAA+AGG | + | chr2.2:10677242-10677261 | MS.gene043318:CDS | 45.0% | |
TTACAACCAACCCTTTCCTC+TGG | - | chr2.2:10675016-10675035 | None:intergenic | 45.0% | |
! | GTGAGGTCACATTTTACAGC+TGG | + | chr2.2:10676424-10676443 | MS.gene043318:CDS | 45.0% |
!! | ATTGGTCTTCAGTTTGGGTG+AGG | + | chr2.2:10676407-10676426 | MS.gene043318:CDS | 45.0% |
!! | GAAAGGGTTGGTTGTAAAGC+TGG | + | chr2.2:10675019-10675038 | MS.gene043318:CDS | 45.0% |
ACCAGCCTGGTCTGTGTATA+TGG | - | chr2.2:10676128-10676147 | None:intergenic | 50.0% | |
ACCATATACACAGACCAGGC+TGG | + | chr2.2:10676124-10676143 | MS.gene043318:CDS | 50.0% | |
CGCAAACACGTGTAGAAAGC+TGG | - | chr2.2:10677188-10677207 | None:intergenic | 50.0% | |
CTCAAGTAGCGCAAATGCTC+TGG | - | chr2.2:10675127-10675146 | None:intergenic | 50.0% | |
GACCGCATAAGCTGACTGTT+GGG | - | chr2.2:10676625-10676644 | None:intergenic | 50.0% | |
GACGACTCGTCAAAAGGAGA+TGG | + | chr2.2:10675303-10675322 | MS.gene043318:CDS | 50.0% | |
GACTCGTCAAAAGGAGATGG+TGG | + | chr2.2:10675306-10675325 | MS.gene043318:CDS | 50.0% | |
GGGTTGTCACAGTCGACATT+AGG | + | chr2.2:10676908-10676927 | MS.gene043318:CDS | 50.0% | |
GGTCTTTGCTCATGGCACAT+GGG | + | chr2.2:10676193-10676212 | MS.gene043318:CDS | 50.0% | |
TACACGTGTTTGCGCAGATG+CGG | + | chr2.2:10677194-10677213 | MS.gene043318:CDS | 50.0% | |
TCAACGGTGTTCTTGAGGCA+GGG | + | chr2.2:10677235-10677254 | MS.gene043318:CDS | 50.0% | |
TGGTCTTTGCTCATGGCACA+TGG | + | chr2.2:10676192-10676211 | MS.gene043318:CDS | 50.0% | |
!! | GAAGTGATGGGTCAAGGAGT+TGG | + | chr2.2:10675229-10675248 | MS.gene043318:CDS | 50.0% |
ACTTCAACAACGCACCAGCC+TGG | - | chr2.2:10676141-10676160 | None:intergenic | 55.0% | |
CTCAACGGTGTTCTTGAGGC+AGG | + | chr2.2:10677234-10677253 | MS.gene043318:CDS | 55.0% | |
GGACCGCATAAGCTGACTGT+TGG | - | chr2.2:10676626-10676645 | None:intergenic | 55.0% | |
TGAGGCAGGGAAAAAGGCAG+AGG | + | chr2.2:10677248-10677267 | MS.gene043318:CDS | 55.0% | |
! | CGTCAAAAGGAGATGGTGGC+TGG | + | chr2.2:10675310-10675329 | MS.gene043318:CDS | 55.0% |
!! | GTGATGGGTCAAGGAGTTGG+AGG | + | chr2.2:10675232-10675251 | MS.gene043318:CDS | 55.0% |
ACGTGTTTGCGCAGATGCGG+AGG | + | chr2.2:10677197-10677216 | MS.gene043318:CDS | 60.0% | |
GGGTCAAGGAGTTGGAGGCA+CGG | + | chr2.2:10675237-10675256 | MS.gene043318:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 10674845 | 10677951 | 10674845 | ID=MS.gene043318 |
chr2.2 | mRNA | 10674845 | 10677951 | 10674845 | ID=MS.gene043318.t1;Parent=MS.gene043318 |
chr2.2 | exon | 10674845 | 10675535 | 10674845 | ID=MS.gene043318.t1.exon1;Parent=MS.gene043318.t1 |
chr2.2 | CDS | 10674845 | 10675535 | 10674845 | ID=cds.MS.gene043318.t1;Parent=MS.gene043318.t1 |
chr2.2 | exon | 10675990 | 10676145 | 10675990 | ID=MS.gene043318.t1.exon2;Parent=MS.gene043318.t1 |
chr2.2 | CDS | 10675990 | 10676145 | 10675990 | ID=cds.MS.gene043318.t1;Parent=MS.gene043318.t1 |
chr2.2 | exon | 10676182 | 10676466 | 10676182 | ID=MS.gene043318.t1.exon3;Parent=MS.gene043318.t1 |
chr2.2 | CDS | 10676182 | 10676466 | 10676182 | ID=cds.MS.gene043318.t1;Parent=MS.gene043318.t1 |
chr2.2 | exon | 10676854 | 10677423 | 10676854 | ID=MS.gene043318.t1.exon4;Parent=MS.gene043318.t1 |
chr2.2 | CDS | 10676854 | 10677423 | 10676854 | ID=cds.MS.gene043318.t1;Parent=MS.gene043318.t1 |
chr2.2 | exon | 10677860 | 10677951 | 10677860 | ID=MS.gene043318.t1.exon5;Parent=MS.gene043318.t1 |
chr2.2 | CDS | 10677860 | 10677951 | 10677860 | ID=cds.MS.gene043318.t1;Parent=MS.gene043318.t1 |
Gene Sequence |
Protein sequence |