AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene043336

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene043336.t1 MTR_2g089420 73.961 457 43 6 1 410 1 428 0.0 659
MS.gene043336.t1 MTR_2g089420 52.663 169 60 3 136 304 303 451 3.97e-39 146
MS.gene043336.t1 MTR_2g089450 67.699 226 55 6 1 211 1 223 1.84e-99 296
MS.gene043336.t1 MTR_2g089450 55.882 102 31 4 214 311 137 228 4.10e-15 75.1
MS.gene043336.t1 MTR_2g089450 63.095 84 23 5 302 380 146 226 4.13e-11 63.2
MS.gene043336.t1 MTR_0008s0390 49.799 249 87 6 1 212 1 248 6.76e-77 240
MS.gene043336.t1 MTR_0251s0050 45.714 280 103 7 1 258 1 253 1.71e-68 218
MS.gene043336.t1 MTR_0008s0470 51.485 202 90 3 1 200 1 196 6.53e-67 215
MS.gene043336.t1 MTR_0008s0280 46.083 217 101 5 1 209 1 209 1.09e-56 186
MS.gene043336.t1 MTR_1g043080 44.105 229 95 5 1 218 1 207 1.07e-54 182
MS.gene043336.t1 MTR_1g076150 46.047 215 94 5 1 209 1 199 2.24e-54 181
MS.gene043336.t1 MTR_0063s0090 43.421 228 99 9 1 209 1 217 8.41e-54 179
MS.gene043336.t1 MTR_1g043050 47.867 211 85 6 1 202 1 195 8.95e-54 179
MS.gene043336.t1 MTR_2g011660 64.706 119 40 1 1 117 1 119 1.50e-51 176
MS.gene043336.t1 MTR_7g096930 60.000 135 48 2 1 129 1 135 2.75e-51 174
MS.gene043336.t1 MTR_4g091490 63.025 119 42 1 1 117 1 119 3.84e-51 176
MS.gene043336.t1 MTR_7g115650 63.866 119 42 1 1 118 1 119 3.89e-51 171
MS.gene043336.t1 MTR_3g074520 61.864 118 44 1 1 117 1 118 3.80e-50 173
MS.gene043336.t1 MTR_2g089620 62.712 118 43 1 1 117 1 118 5.58e-49 169
MS.gene043336.t1 MTR_6g012690 63.559 118 42 1 1 117 1 118 9.17e-49 169
MS.gene043336.t1 MTR_1g100653 50.980 153 69 2 1 147 1 153 1.17e-48 167
MS.gene043336.t1 MTR_4g082290 63.559 118 42 1 1 117 1 118 1.76e-48 170
MS.gene043336.t1 MTR_4g105130 40.000 240 129 5 6 245 7 231 2.41e-48 168
MS.gene043336.t1 MTR_1g112760 65.421 107 37 0 11 117 13 119 2.46e-48 164
MS.gene043336.t1 MTR_7g011170 63.559 118 42 1 1 117 1 118 2.64e-48 167
MS.gene043336.t1 MTR_3g077110 61.017 118 45 1 1 117 1 118 1.17e-47 166
MS.gene043336.t1 MTR_1g085040 53.061 147 59 2 6 152 7 143 2.98e-47 166
MS.gene043336.t1 MTR_4g478180 60.169 118 46 1 1 117 2 119 3.14e-47 165
MS.gene043336.t1 MTR_4g102380 61.864 118 44 1 1 117 1 118 3.33e-47 163
MS.gene043336.t1 MTR_4g125520 49.704 169 72 2 1 156 1 169 4.30e-47 164
MS.gene043336.t1 MTR_5g029840 61.017 118 45 1 1 117 1 118 5.25e-47 164
MS.gene043336.t1 MTR_5g007370 59.322 118 47 1 1 117 1 118 1.64e-46 162
MS.gene043336.t1 MTR_8g031360 63.025 119 41 2 1 116 1 119 3.36e-46 161
MS.gene043336.t1 MTR_7g076740 63.248 117 41 2 1 115 1 117 4.34e-46 161
MS.gene043336.t1 MTR_5g078140 61.017 118 45 1 1 117 1 118 4.85e-46 161
MS.gene043336.t1 MTR_3g065440 61.864 118 44 1 1 117 1 118 4.87e-46 161
MS.gene043336.t1 MTR_5g079670 58.974 117 48 0 1 117 1 117 4.97e-46 158
MS.gene043336.t1 MTR_8g027345 59.836 122 48 1 1 121 1 122 1.03e-45 160
MS.gene043336.t1 MTR_3g461490 58.621 116 47 1 1 115 1 116 1.12e-45 160
MS.gene043336.t1 MTR_4g082230 61.017 118 45 1 1 117 1 118 2.76e-45 161
MS.gene043336.t1 MTR_1g085640 60.909 110 43 0 6 115 7 116 3.16e-45 161
MS.gene043336.t1 MTR_4g121460 59.016 122 49 1 1 121 1 122 3.53e-45 159
MS.gene043336.t1 MTR_4g073420 57.265 117 49 1 1 116 1 117 3.99e-45 158
MS.gene043336.t1 MTR_3g097450 59.483 116 46 1 1 115 1 116 4.24e-45 158
MS.gene043336.t1 MTR_7g110830 60.909 110 43 0 6 115 7 116 4.76e-45 160
MS.gene043336.t1 MTR_7g117730 59.483 116 46 1 1 115 1 116 5.52e-45 156
MS.gene043336.t1 MTR_8g017440 49.020 153 72 2 6 157 7 154 6.00e-45 159
MS.gene043336.t1 MTR_2g034790 47.126 174 81 4 1 164 1 173 9.54e-45 158
MS.gene043336.t1 MTR_8g017500 60.000 110 44 0 6 115 7 116 1.26e-44 158
MS.gene043336.t1 MTR_2g064160 58.559 111 46 0 6 116 6 116 1.87e-44 157
MS.gene043336.t1 MTR_8g017540 58.559 111 46 0 6 116 53 163 3.46e-44 158
MS.gene043336.t1 MTR_7g010210 58.824 119 48 1 1 118 1 119 3.95e-44 156
MS.gene043336.t1 MTR_2g067420 62.963 108 39 1 3 109 5 112 5.53e-44 156
MS.gene043336.t1 MTR_7g010210 58.824 119 48 1 1 118 1 119 7.56e-44 154
MS.gene043336.t1 MTR_2g099740 58.559 111 46 0 6 116 7 117 7.77e-44 157
MS.gene043336.t1 MTR_3g083540 59.459 111 45 0 6 116 36 146 1.24e-43 154
MS.gene043336.t1 MTR_5g042030 62.963 108 40 0 10 117 6 113 1.30e-43 154
MS.gene043336.t1 MTR_4g485530 63.810 105 38 0 13 117 14 118 2.40e-43 150
MS.gene043336.t1 MTR_1g017140 42.515 167 91 4 1 165 1 164 8.35e-43 153
MS.gene043336.t1 MTR_3g039990 58.475 118 48 1 1 117 2 119 1.08e-42 152
MS.gene043336.t1 MTR_2g097910 61.261 111 42 1 11 121 20 129 1.20e-42 152
MS.gene043336.t1 MTR_5g014990 52.713 129 58 3 1 126 1 129 1.63e-42 152
MS.gene043336.t1 MTR_8g095390 56.034 116 50 1 1 115 1 116 1.77e-42 152
MS.gene043336.t1 MTR_8g017390 58.407 113 44 2 6 116 7 118 3.18e-42 155
MS.gene043336.t1 MTR_1g017000 52.893 121 55 2 1 119 1 121 4.16e-42 149
MS.gene043336.t1 MTR_6g009430 55.085 118 52 1 1 117 1 118 4.41e-42 151
MS.gene043336.t1 MTR_7g111290 62.745 102 38 0 6 107 7 108 6.79e-42 152
MS.gene043336.t1 MTR_4g065017 60.714 112 43 1 8 119 14 124 7.91e-42 150
MS.gene043336.t1 MTR_8g098860 55.752 113 50 0 6 118 7 119 1.04e-41 150
MS.gene043336.t1 MTR_3g103570 51.079 139 65 3 1 136 1 139 5.69e-41 149
MS.gene043336.t1 MTR_1g062940 61.538 104 40 0 11 114 6 109 5.79e-41 145
MS.gene043336.t1 MTR_6g012180 59.091 110 44 1 1 109 1 110 7.53e-41 147
MS.gene043336.t1 MTR_8g017340 57.522 113 45 2 6 116 7 118 8.61e-41 151
MS.gene043336.t1 MTR_3g028740 60.952 105 41 0 11 115 22 126 1.05e-40 148
MS.gene043336.t1 MTR_1g100667 59.434 106 43 0 12 117 14 119 1.17e-40 145
MS.gene043336.t1 MTR_0140s0030 54.918 122 54 1 1 121 2 123 1.17e-40 147
MS.gene043336.t1 MTR_0489s0020 54.918 122 54 1 1 121 2 123 1.17e-40 147
MS.gene043336.t1 MTR_5g079290 57.944 107 45 0 10 116 16 122 1.21e-40 145
MS.gene043336.t1 MTR_6g090405 54.237 118 52 2 1 116 1 118 1.51e-40 145
MS.gene043336.t1 MTR_5g079220 55.856 111 49 0 6 116 16 126 1.74e-40 145
MS.gene043336.t1 MTR_4g057635 53.390 118 53 2 1 116 1 118 2.18e-40 146
MS.gene043336.t1 MTR_5g010020 58.824 102 42 0 6 107 7 108 2.35e-40 147
MS.gene043336.t1 MTR_7g102110 55.085 118 51 2 1 116 1 118 2.87e-40 144
MS.gene043336.t1 MTR_7g087130 56.780 118 50 1 1 117 1 118 2.94e-40 146
MS.gene043336.t1 MTR_1g110460 56.780 118 50 1 9 125 24 141 3.62e-40 145
MS.gene043336.t1 MTR_8g017350 56.637 113 46 2 6 116 7 118 5.12e-40 151
MS.gene043336.t1 MTR_8g020490 55.085 118 50 1 1 118 1 115 5.98e-40 143
MS.gene043336.t1 MTR_4g100720 57.692 104 44 0 11 114 13 116 7.60e-40 140
MS.gene043336.t1 MTR_6g055910 57.547 106 45 0 12 117 15 120 1.58e-39 143
MS.gene043336.t1 MTR_1g073170 59.223 103 42 0 12 114 21 123 1.02e-38 140
MS.gene043336.t1 MTR_0001s0360 57.944 107 45 0 10 116 6 112 1.19e-38 140
MS.gene043336.t1 MTR_5g078910 58.491 106 44 0 11 116 7 112 1.42e-38 141
MS.gene043336.t1 MTR_2g095520 54.955 111 48 2 1 109 1 111 2.30e-38 141
MS.gene043336.t1 MTR_8g060940 58.824 102 42 0 10 111 6 107 3.55e-38 138
MS.gene043336.t1 MTR_5g078800 57.944 107 45 0 10 116 6 112 4.65e-38 139
MS.gene043336.t1 MTR_5g079120 51.639 122 59 0 10 131 60 181 6.15e-38 139
MS.gene043336.t1 MTR_7g035075 57.143 105 45 0 11 115 14 118 7.25e-38 136
MS.gene043336.t1 MTR_5g078860 57.009 107 46 0 10 116 6 112 7.41e-38 139
MS.gene043336.t1 MTR_3g052450 55.556 108 48 0 7 114 36 143 8.41e-38 144
MS.gene043336.t1 MTR_4g097570 54.128 109 48 2 1 107 1 109 8.70e-38 139
MS.gene043336.t1 MTR_7g109320 58.621 116 47 1 1 115 1 116 2.14e-37 139
MS.gene043336.t1 MTR_5g078950 56.311 103 45 0 10 112 6 108 2.26e-37 137
MS.gene043336.t1 MTR_3g052430 56.731 104 45 0 11 114 41 144 2.52e-37 142
MS.gene043336.t1 MTR_6g006030 52.542 118 53 1 1 115 1 118 3.97e-37 134
MS.gene043336.t1 MTR_0197s0010 57.426 101 43 0 15 115 5 105 4.32e-37 135
MS.gene043336.t1 MTR_0193s0090 38.830 188 95 4 10 178 6 192 4.73e-37 134
MS.gene043336.t1 MTR_1g045610 57.282 103 44 0 12 114 22 124 5.64e-37 135
MS.gene043336.t1 MTR_0247s0040 54.206 107 49 0 6 112 2 108 6.67e-37 133
MS.gene043336.t1 MTR_3g011610 55.769 104 46 0 11 114 37 140 6.76e-37 141
MS.gene043336.t1 MTR_1g086510 45.625 160 69 3 10 169 20 161 8.82e-37 135
MS.gene043336.t1 MTR_7g017260 55.046 109 47 1 10 116 24 132 9.17e-37 135
MS.gene043336.t1 MTR_4g097570 53.636 110 48 3 1 107 1 110 1.08e-36 135
MS.gene043336.t1 MTR_8g042410 56.731 104 45 0 11 114 37 140 1.60e-36 140
MS.gene043336.t1 MTR_5g078930 56.250 112 49 0 12 123 10 121 2.47e-36 132
MS.gene043336.t1 MTR_4g128670 53.153 111 50 2 1 109 1 111 4.20e-36 135
MS.gene043336.t1 MTR_1g021230 54.128 109 50 0 11 119 57 165 5.13e-36 137
MS.gene043336.t1 MTR_1g086530 42.138 159 74 2 11 169 33 173 8.67e-36 133
MS.gene043336.t1 MTR_4g063100 52.294 109 52 0 12 120 8 116 3.73e-35 130
MS.gene043336.t1 MTR_2g096380 45.522 134 70 1 11 144 6 136 3.73e-34 127
MS.gene043336.t1 MTR_2g088170 57.143 105 45 0 10 114 28 132 2.43e-33 130
MS.gene043336.t1 MTR_2g033170 49.587 121 60 1 11 131 24 143 3.40e-32 124
MS.gene043336.t1 MTR_3g045430 47.009 117 60 2 1 115 1 117 8.44e-31 120
MS.gene043336.t1 MTR_4g123040 47.200 125 65 1 7 131 20 143 2.93e-30 119
MS.gene043336.t1 MTR_8g006470 50.000 108 53 1 7 113 6 113 3.54e-30 118
MS.gene043336.t1 MTR_5g062790 48.544 103 52 1 12 113 10 112 3.79e-30 118
MS.gene043336.t1 MTR_5g088080 47.573 103 53 1 12 113 13 115 3.80e-30 117
MS.gene043336.t1 MTR_5g088150 47.573 103 53 1 12 113 13 115 3.80e-30 117
MS.gene043336.t1 MTR_5g488210 47.573 103 53 1 12 113 13 115 3.80e-30 117
MS.gene043336.t1 MTR_5g088640 47.573 103 53 1 12 113 13 115 4.69e-30 117
MS.gene043336.t1 MTR_6g055910 61.842 76 29 0 42 117 16 91 5.06e-30 117
MS.gene043336.t1 MTR_5g070020 37.895 190 97 7 11 196 120 292 1.23e-29 118
MS.gene043336.t1 MTR_5g488170 47.573 103 53 1 12 113 13 115 1.35e-29 115
MS.gene043336.t1 MTR_1g083630 48.148 108 56 0 7 114 8 115 1.36e-29 121
MS.gene043336.t1 MTR_5g007300 56.818 88 37 1 1 87 53 140 1.85e-29 112
MS.gene043336.t1 MTR_5g049190 48.113 106 52 2 13 117 19 122 4.76e-29 114
MS.gene043336.t1 MTR_7g111290 68.657 67 21 0 42 108 1 67 5.78e-28 113
MS.gene043336.t1 MTR_3g463400 48.246 114 55 3 11 123 131 241 8.09e-28 114
MS.gene043336.t1 MTR_4g019370 46.789 109 55 2 13 120 38 144 9.83e-28 112
MS.gene043336.t1 MTR_5g088610 46.602 103 54 1 12 113 10 112 1.43e-27 112
MS.gene043336.t1 MTR_3g101290 50.000 102 50 1 13 114 37 137 1.76e-27 109
MS.gene043336.t1 MTR_4g094982 47.170 106 47 2 13 114 5 105 2.28e-27 110
MS.gene043336.t1 MTR_4g029540 47.706 109 55 2 11 118 10 117 2.76e-27 110
MS.gene043336.t1 MTR_5g016510 47.573 103 51 2 13 114 5 105 1.91e-26 108
MS.gene043336.t1 MTR_4g063100 56.410 78 34 0 43 120 10 87 1.95e-26 106
MS.gene043336.t1 MTR_7g037260 38.235 170 80 5 13 170 145 301 2.11e-26 109
MS.gene043336.t1 MTR_3g077650 42.241 116 60 3 13 127 181 290 4.94e-26 109
MS.gene043336.t1 MTR_7g451170 42.478 113 62 2 13 125 191 300 1.02e-25 108
MS.gene043336.t1 MTR_4g082040 44.348 115 61 2 13 126 105 217 2.00e-25 107
MS.gene043336.t1 MTR_5g041570 42.857 119 65 2 13 130 134 250 2.50e-25 107
MS.gene043336.t1 MTR_2g096380 46.602 103 52 1 42 144 18 117 4.60e-25 102
MS.gene043336.t1 MTR_4g105660 44.340 106 56 2 13 117 180 283 5.71e-25 106
MS.gene043336.t1 MTR_6g015455 49.515 103 49 2 13 114 5 105 6.74e-25 108
MS.gene043336.t1 MTR_6g074860 49.020 102 49 2 13 113 4 103 1.50e-24 101
MS.gene043336.t1 MTR_7g061330 45.872 109 56 2 8 115 108 214 3.76e-24 105
MS.gene043336.t1 MTR_7g061330 35.000 100 63 2 13 111 61 159 9.41e-14 73.6
MS.gene043336.t1 MTR_7g461410 45.872 109 56 2 8 115 108 214 3.76e-24 105
MS.gene043336.t1 MTR_7g461410 35.000 100 63 2 13 111 61 159 9.41e-14 73.6
MS.gene043336.t1 MTR_7g061330 45.872 109 56 2 8 115 72 178 7.58e-24 103
MS.gene043336.t1 MTR_7g061330 35.000 100 63 2 13 111 25 123 1.53e-13 72.8
MS.gene043336.t1 MTR_4g088015 40.171 117 68 2 13 129 221 335 1.18e-23 102
MS.gene043336.t1 MTR_4g128190 41.121 107 49 2 8 113 8 101 1.78e-23 98.6
MS.gene043336.t1 MTR_7g450950 38.462 117 70 2 13 129 157 271 3.65e-23 99.8
MS.gene043336.t1 MTR_7g037130 42.857 112 61 2 13 124 145 253 4.60e-23 99.8
MS.gene043336.t1 MTR_7g035350 41.379 116 64 3 13 128 225 336 5.30e-23 100
MS.gene043336.t1 MTR_1g057980 42.157 102 58 1 11 112 78 178 6.09e-23 98.6
MS.gene043336.t1 MTR_3g110028 42.202 109 60 2 8 115 80 186 1.09e-22 101
MS.gene043336.t1 MTR_3g110028 34.000 100 64 2 13 111 33 131 8.18e-13 70.9
MS.gene043336.t1 MTR_1g026870 42.202 109 60 2 8 115 80 186 3.10e-22 99.8
MS.gene043336.t1 MTR_1g026870 36.000 100 62 2 13 111 33 131 2.41e-14 75.5
MS.gene043336.t1 MTR_3g089045 44.954 109 57 2 7 114 10 116 3.25e-22 96.3
MS.gene043336.t1 MTR_1g085880 45.370 108 57 2 8 113 8 115 3.91e-22 93.6
MS.gene043336.t1 MTR_5g082910 44.860 107 55 3 7 111 12 116 5.15e-22 95.5
MS.gene043336.t1 MTR_7g086960 43.478 115 62 2 13 126 89 201 7.75e-22 96.3
MS.gene043336.t1 MTR_1g085770 45.370 108 57 2 8 113 8 115 9.02e-22 95.5
MS.gene043336.t1 MTR_6g027340 40.777 103 58 2 13 114 16 116 1.42e-21 92.4
MS.gene043336.t1 MTR_6g027360 40.741 108 61 2 8 114 73 178 1.69e-21 94.7
MS.gene043336.t1 MTR_0023s0210 51.282 78 38 0 10 87 6 83 5.90e-21 87.0
MS.gene043336.t1 MTR_5g010650 44.000 100 55 1 8 107 105 203 3.41e-20 92.8
MS.gene043336.t1 MTR_6g027370 40.000 115 63 3 13 123 99 211 7.33e-20 90.5
MS.gene043336.t1 MTR_7g061550 34.783 138 77 3 16 151 10 136 1.94e-16 80.5
MS.gene043336.t1 MTR_8g468380 39.286 112 65 2 15 125 24 133 1.77e-15 78.2
MS.gene043336.t1 MTR_5g038910 39.604 101 58 2 15 114 28 126 5.94e-15 76.6
MS.gene043336.t1 MTR_5g038910 39.604 101 58 2 15 114 28 126 9.77e-15 75.9
MS.gene043336.t1 MTR_6g055910 57.143 49 21 0 69 117 2 50 6.56e-14 70.9
MS.gene043336.t1 MTR_8g017480 52.174 46 22 0 6 51 7 52 6.14e-12 60.8
MS.gene043336.t1 MTR_4g063100 53.061 49 23 0 72 120 4 52 6.39e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene043336.t1 AT3G23250 43.049 223 105 5 1 202 1 222 2.19e-55 185
MS.gene043336.t1 AT2G31180 47.143 210 94 5 1 209 1 194 4.25e-52 175
MS.gene043336.t1 AT4G28110 62.712 118 43 1 1 117 1 118 9.10e-52 175
MS.gene043336.t1 AT5G16770 63.559 118 42 1 1 117 1 118 5.55e-51 174
MS.gene043336.t1 AT5G16770 63.559 118 42 1 1 117 1 118 5.55e-51 174
MS.gene043336.t1 AT5G15310 65.254 118 40 1 1 117 1 118 9.76e-51 174
MS.gene043336.t1 AT5G16770 63.559 118 42 1 1 117 1 118 1.09e-50 174
MS.gene043336.t1 AT5G16770 63.559 118 42 1 1 117 1 118 1.09e-50 174
MS.gene043336.t1 AT5G15310 65.254 118 40 1 1 117 1 118 1.23e-50 173
MS.gene043336.t1 AT5G15310 65.254 118 40 1 1 117 1 118 1.97e-50 171
MS.gene043336.t1 AT1G06180 66.379 116 38 1 1 115 1 116 3.17e-50 170
MS.gene043336.t1 AT4G21440 61.017 118 45 1 1 117 1 118 3.24e-50 173
MS.gene043336.t1 AT3G01140 65.254 118 40 1 1 117 1 118 3.57e-50 173
MS.gene043336.t1 AT1G16490 64.035 114 40 1 3 115 5 118 4.85e-50 171
MS.gene043336.t1 AT1G74080 65.254 118 40 1 1 117 1 118 8.14e-50 172
MS.gene043336.t1 AT4G05100 62.185 119 43 1 1 117 1 119 1.87e-49 170
MS.gene043336.t1 AT5G07700 50.888 169 79 2 3 171 4 168 3.10e-49 170
MS.gene043336.t1 AT5G07700 50.888 169 79 2 3 171 4 168 3.10e-49 170
MS.gene043336.t1 AT3G01140 64.407 118 41 1 1 117 44 161 3.36e-49 171
MS.gene043336.t1 AT5G60890 63.793 116 41 1 1 115 1 116 5.20e-49 168
MS.gene043336.t1 AT3G02940 61.864 118 44 1 1 117 1 118 7.04e-49 168
MS.gene043336.t1 AT3G02940 61.864 118 44 1 1 117 1 118 1.47e-48 168
MS.gene043336.t1 AT3G02940 61.864 118 44 1 1 117 1 118 1.47e-48 168
MS.gene043336.t1 AT3G61250 63.248 117 42 1 1 116 1 117 2.41e-48 167
MS.gene043336.t1 AT1G34670 61.864 118 44 1 1 117 1 118 5.00e-48 168
MS.gene043336.t1 AT1G18570 63.025 119 42 1 1 117 1 119 6.26e-48 167
MS.gene043336.t1 AT5G10280 61.017 118 45 1 1 117 1 118 6.66e-48 167
MS.gene043336.t1 AT1G79180 60.684 117 45 1 3 118 5 121 1.60e-47 164
MS.gene043336.t1 AT1G74430 62.500 112 42 0 7 118 8 119 2.80e-47 163
MS.gene043336.t1 AT5G61420 60.169 118 46 1 1 117 1 118 5.81e-47 165
MS.gene043336.t1 AT5G07690 57.463 134 55 2 1 132 1 134 5.90e-47 164
MS.gene043336.t1 AT5G65230 61.017 118 45 1 1 117 1 118 6.61e-47 163
MS.gene043336.t1 AT4G17785 57.983 119 48 1 1 117 1 119 1.17e-46 164
MS.gene043336.t1 AT4G17785 57.983 119 48 1 1 117 1 119 1.34e-46 164
MS.gene043336.t1 AT1G56160 61.404 114 43 1 3 115 5 118 2.25e-46 161
MS.gene043336.t1 AT4G38620 58.120 117 48 1 1 116 1 117 3.39e-46 160
MS.gene043336.t1 AT1G22640 57.265 117 49 1 1 116 1 117 4.53e-46 159
MS.gene043336.t1 AT4G34990 58.475 118 48 1 1 117 1 118 5.78e-46 160
MS.gene043336.t1 AT4G22680 61.017 118 45 1 1 117 1 118 6.25e-46 159
MS.gene043336.t1 AT3G12820 59.483 116 46 1 3 117 5 120 9.02e-46 158
MS.gene043336.t1 AT5G14750 46.032 189 97 4 8 193 13 199 1.05e-45 157
MS.gene043336.t1 AT5G16600 61.864 118 44 1 1 117 1 118 1.66e-45 160
MS.gene043336.t1 AT5G26660 57.600 125 44 1 6 130 7 122 2.18e-45 160
MS.gene043336.t1 AT4G01680 61.818 110 42 0 6 115 7 116 2.58e-45 157
MS.gene043336.t1 AT1G57560 58.036 112 47 0 6 117 7 118 3.14e-45 158
MS.gene043336.t1 AT1G57560 58.036 112 47 0 6 117 7 118 3.49e-45 159
MS.gene043336.t1 AT5G54230 61.682 107 41 0 11 117 12 118 4.35e-45 159
MS.gene043336.t1 AT2G16720 56.410 117 50 1 1 116 1 117 4.76e-45 157
MS.gene043336.t1 AT4G12350 43.721 215 111 6 1 209 1 211 5.88e-45 157
MS.gene043336.t1 AT1G66230 60.169 118 46 1 1 117 1 118 6.00e-45 157
MS.gene043336.t1 AT4G09460 57.265 117 49 1 1 116 1 117 9.71e-45 155
MS.gene043336.t1 AT4G01680 61.818 110 42 0 6 115 7 116 1.13e-44 158
MS.gene043336.t1 AT1G35515 56.410 117 50 1 1 116 1 117 1.25e-44 154
MS.gene043336.t1 AT3G13540 56.034 116 50 1 4 118 15 130 1.28e-44 155
MS.gene043336.t1 AT5G56110 57.759 116 48 1 1 115 1 116 1.74e-44 157
MS.gene043336.t1 AT3G62610 60.345 116 45 1 1 115 1 116 2.51e-44 157
MS.gene043336.t1 AT1G18710 59.633 109 44 0 7 115 8 116 3.10e-44 155
MS.gene043336.t1 AT3G12720 54.955 111 50 0 6 116 17 127 5.52e-44 155
MS.gene043336.t1 AT5G62320 46.429 168 73 4 3 162 4 162 7.82e-44 153
MS.gene043336.t1 AT5G14340 58.621 116 47 1 1 115 13 128 2.04e-43 153
MS.gene043336.t1 AT1G09540 49.286 140 60 1 6 145 7 135 2.29e-43 155
MS.gene043336.t1 AT3G13890 57.658 111 47 0 6 116 7 117 2.49e-43 155
MS.gene043336.t1 AT5G35550 54.615 130 59 0 11 140 14 143 7.49e-43 151
MS.gene043336.t1 AT3G47600 57.627 118 49 1 1 117 1 118 1.80e-42 152
MS.gene043336.t1 AT3G28470 59.091 110 44 1 1 109 1 110 2.92e-42 151
MS.gene043336.t1 AT5G40330 61.538 104 40 0 12 115 13 116 3.46e-42 148
MS.gene043336.t1 AT5G62470 45.614 171 91 2 1 169 1 171 3.72e-42 152
MS.gene043336.t1 AT3G28910 58.475 118 48 1 1 117 1 118 3.82e-42 151
MS.gene043336.t1 AT3G27920 53.782 119 55 0 3 121 6 124 6.11e-42 148
MS.gene043336.t1 AT5G49330 56.897 116 49 1 1 115 1 116 8.47e-42 150
MS.gene043336.t1 AT1G63910 56.250 112 49 0 6 117 7 118 1.42e-41 151
MS.gene043336.t1 AT1G08810 55.556 126 55 1 1 125 1 126 1.76e-41 148
MS.gene043336.t1 AT5G57620 53.279 122 55 2 1 120 1 122 2.75e-41 149
MS.gene043336.t1 AT2G47460 55.172 116 51 1 1 115 1 116 2.83e-41 150
MS.gene043336.t1 AT4G01680 55.738 122 42 1 6 115 7 128 2.98e-41 149
MS.gene043336.t1 AT5G12870 59.813 107 43 0 11 117 18 124 3.86e-41 147
MS.gene043336.t1 AT1G79180 46.667 150 46 2 3 118 5 154 5.55e-41 148
MS.gene043336.t1 AT1G74650 57.265 117 49 1 1 116 1 117 5.71e-41 148
MS.gene043336.t1 AT3G49690 55.085 118 51 2 1 116 1 118 5.75e-41 147
MS.gene043336.t1 AT5G62470 45.614 171 90 3 1 169 1 170 1.46e-40 147
MS.gene043336.t1 AT3G13890 53.333 120 47 1 6 116 7 126 2.35e-40 147
MS.gene043336.t1 AT3G08500 61.905 105 40 0 11 115 30 134 3.59e-40 146
MS.gene043336.t1 AT5G23000 52.542 118 54 2 1 116 1 118 4.36e-40 145
MS.gene043336.t1 AT4G37780 50.394 127 57 3 1 125 1 123 8.30e-40 144
MS.gene043336.t1 AT5G65790 53.390 118 53 2 1 116 1 118 1.72e-39 145
MS.gene043336.t1 AT5G06100 53.982 113 52 0 2 114 23 135 4.03e-39 146
MS.gene043336.t1 AT2G36890 53.390 118 53 2 1 116 1 118 8.42e-39 141
MS.gene043336.t1 AT2G32460 59.048 105 43 0 10 114 5 109 9.03e-39 145
MS.gene043336.t1 AT2G32460 57.407 108 46 0 7 114 14 121 9.43e-39 145
MS.gene043336.t1 AT2G36890 53.390 118 53 2 1 116 42 159 1.07e-38 142
MS.gene043336.t1 AT5G06100 53.982 113 52 0 2 114 23 135 1.17e-38 146
MS.gene043336.t1 AT5G06100 53.982 113 52 0 2 114 23 135 1.17e-38 146
MS.gene043336.t1 AT5G06100 53.982 113 52 0 2 114 23 135 1.17e-38 146
MS.gene043336.t1 AT5G06100 53.982 113 52 0 2 114 23 135 1.17e-38 146
MS.gene043336.t1 AT3G30210 43.548 186 76 3 10 182 26 195 3.48e-38 139
MS.gene043336.t1 AT5G40350 57.009 107 46 0 11 117 17 123 5.05e-38 137
MS.gene043336.t1 AT3G11440 53.097 113 49 1 6 114 32 144 6.29e-38 143
MS.gene043336.t1 AT5G52260 57.009 107 46 0 12 118 13 119 7.03e-38 138
MS.gene043336.t1 AT3G27810 57.009 107 45 1 11 117 20 125 1.53e-37 136
MS.gene043336.t1 AT3G24310 58.095 105 44 0 10 114 17 121 1.64e-37 137
MS.gene043336.t1 AT5G52600 57.692 104 44 0 11 114 12 115 1.85e-37 135
MS.gene043336.t1 AT3G11440 53.097 113 49 1 6 114 32 144 2.03e-37 143
MS.gene043336.t1 AT3G11440 53.097 113 49 1 6 114 32 144 2.03e-37 143
MS.gene043336.t1 AT3G11440 53.097 113 49 1 6 114 32 144 2.03e-37 143
MS.gene043336.t1 AT4G26930 57.282 103 44 0 11 113 19 121 2.41e-37 140
MS.gene043336.t1 AT4G13480 59.223 103 42 0 12 114 7 109 3.95e-37 136
MS.gene043336.t1 AT3G48920 56.863 102 44 0 12 113 19 120 4.25e-37 136
MS.gene043336.t1 AT1G48000 55.340 103 46 0 11 113 32 134 1.01e-36 134
MS.gene043336.t1 AT4G25560 54.206 107 49 0 12 118 11 117 2.43e-36 134
MS.gene043336.t1 AT5G55020 58.252 103 43 0 11 113 26 128 2.49e-36 139
MS.gene043336.t1 AT3G01530 55.340 103 46 0 11 113 25 127 3.09e-36 132
MS.gene043336.t1 AT1G66370 56.190 105 46 0 10 114 7 111 5.00e-36 132
MS.gene043336.t1 AT1G68320 55.769 104 46 0 11 114 19 122 1.66e-35 132
MS.gene043336.t1 AT2G47190 39.583 192 92 5 11 198 20 191 1.88e-35 132
MS.gene043336.t1 AT1G25340 48.507 134 58 2 12 145 19 141 8.31e-35 130
MS.gene043336.t1 AT2G26960 56.436 101 44 0 13 113 22 122 1.52e-34 133
MS.gene043336.t1 AT1G66380 54.783 115 52 0 8 122 5 119 5.97e-34 124
MS.gene043336.t1 AT3G46130 53.333 105 49 0 10 114 8 112 9.90e-34 127
MS.gene043336.t1 AT5G14750 44.253 174 83 6 23 193 3 165 1.14e-33 124
MS.gene043336.t1 AT5G35550 55.882 102 45 0 39 140 45 146 1.48e-33 126
MS.gene043336.t1 AT5G59780 53.398 103 48 0 12 114 9 111 1.83e-33 125
MS.gene043336.t1 AT1G56650 53.846 117 54 0 10 126 7 123 3.12e-33 125
MS.gene043336.t1 AT1G66390 57.143 105 45 0 10 114 7 111 1.14e-32 124
MS.gene043336.t1 AT3G53200 51.923 104 50 0 11 114 9 112 1.18e-32 123
MS.gene043336.t1 AT3G06490 49.587 121 60 1 11 131 19 138 5.81e-32 124
MS.gene043336.t1 AT3G12820 70.423 71 21 0 47 117 2 72 2.34e-31 118
MS.gene043336.t1 AT5G26660 60.920 87 25 1 44 130 14 91 5.42e-31 121
MS.gene043336.t1 AT5G49620 48.760 121 61 1 11 131 26 145 6.67e-31 120
MS.gene043336.t1 AT1G25340 46.269 134 56 3 12 145 19 136 3.52e-30 118
MS.gene043336.t1 AT1G25340 46.269 134 56 3 12 145 19 136 6.14e-30 118
MS.gene043336.t1 AT3G60460 50.000 104 51 1 11 113 11 114 1.53e-28 114
MS.gene043336.t1 AT3G23250 37.952 166 82 4 57 202 1 165 1.72e-28 112
MS.gene043336.t1 AT3G27810 59.211 76 30 1 42 117 2 76 3.69e-28 109
MS.gene043336.t1 AT3G47600 55.789 95 38 1 23 117 22 112 3.94e-28 113
MS.gene043336.t1 AT5G40350 60.811 74 29 0 44 117 5 78 4.77e-28 108
MS.gene043336.t1 AT3G09230 49.123 114 49 2 13 122 55 163 1.08e-27 113
MS.gene043336.t1 AT3G27785 43.220 118 66 1 5 122 181 297 1.36e-27 114
MS.gene043336.t1 AT5G49620 43.704 135 61 2 11 131 26 159 1.90e-27 111
MS.gene043336.t1 AT5G11050 33.740 246 124 8 13 249 105 320 1.95e-27 113
MS.gene043336.t1 AT4G18770 44.828 116 62 2 11 125 215 329 2.25e-27 113
MS.gene043336.t1 AT2G26950 48.421 95 49 0 13 107 18 112 9.09e-27 110
MS.gene043336.t1 AT5G40360 45.614 114 57 3 11 123 156 265 9.50e-27 110
MS.gene043336.t1 AT5G58850 42.063 126 63 3 11 135 103 219 2.24e-26 110
MS.gene043336.t1 AT3G46130 59.722 72 29 0 43 114 9 80 4.39e-26 105
MS.gene043336.t1 AT5G59780 60.563 71 28 0 44 114 20 90 7.07e-26 104
MS.gene043336.t1 AT3G46130 60.563 71 28 0 44 114 20 90 8.52e-26 105
MS.gene043336.t1 AT1G69560 32.308 195 104 3 13 181 107 299 1.03e-25 107
MS.gene043336.t1 AT1G69560 32.308 195 104 3 13 181 123 315 1.13e-25 107
MS.gene043336.t1 AT3G53200 60.563 71 28 0 44 114 9 79 2.73e-25 102
MS.gene043336.t1 AT1G17950 45.763 118 52 3 13 129 5 111 3.22e-25 103
MS.gene043336.t1 AT1G26780 43.590 117 63 2 11 126 96 210 4.54e-25 105
MS.gene043336.t1 AT5G67300 47.573 103 51 2 13 114 6 106 4.85e-25 104
MS.gene043336.t1 AT1G26780 43.590 117 63 2 11 126 96 210 7.22e-25 103
MS.gene043336.t1 AT5G11510 42.593 108 61 1 8 115 76 182 7.80e-25 107
MS.gene043336.t1 AT5G11510 33.000 100 65 2 13 111 29 127 5.20e-13 71.6
MS.gene043336.t1 AT5G11510 42.593 108 61 1 8 115 76 182 7.80e-25 107
MS.gene043336.t1 AT5G11510 33.000 100 65 2 13 111 29 127 5.20e-13 71.6
MS.gene043336.t1 AT5G11510 42.593 108 61 1 8 115 76 182 7.80e-25 107
MS.gene043336.t1 AT5G11510 33.000 100 65 2 13 111 29 127 5.20e-13 71.6
MS.gene043336.t1 AT1G66380 57.143 84 36 0 42 125 6 89 1.05e-24 98.2
MS.gene043336.t1 AT5G11510 42.593 108 61 1 8 115 76 182 1.16e-24 107
MS.gene043336.t1 AT5G11510 33.000 100 65 2 13 111 29 127 6.35e-13 71.2
MS.gene043336.t1 AT5G11510 42.593 108 61 1 8 115 76 182 1.51e-24 106
MS.gene043336.t1 AT5G11510 33.000 100 65 2 13 111 29 127 7.02e-13 70.9
MS.gene043336.t1 AT3G50060 46.602 103 52 2 13 114 6 106 1.76e-24 102
MS.gene043336.t1 AT5G14750 42.143 140 76 4 57 193 1 138 2.12e-24 98.2
MS.gene043336.t1 AT5G14750 42.143 140 76 4 57 193 1 138 2.12e-24 98.2
MS.gene043336.t1 AT3G09370 45.045 111 52 2 8 114 130 235 2.48e-24 105
MS.gene043336.t1 AT3G09370 34.000 100 64 2 13 111 83 181 2.62e-12 68.9
MS.gene043336.t1 AT3G09370 45.045 111 52 2 8 114 125 230 2.65e-24 105
MS.gene043336.t1 AT3G09370 34.000 100 64 2 13 111 78 176 2.79e-12 68.6
MS.gene043336.t1 AT3G09370 45.045 111 52 2 8 114 138 243 3.23e-24 105
MS.gene043336.t1 AT3G09370 34.000 100 64 2 13 111 91 189 2.22e-12 68.9
MS.gene043336.t1 AT5G02320 44.954 109 57 2 8 115 122 228 3.98e-24 105
MS.gene043336.t1 AT5G02320 38.000 100 60 2 13 111 75 173 2.66e-15 78.2
MS.gene043336.t1 AT5G02320 44.954 109 57 2 8 115 122 228 3.98e-24 105
MS.gene043336.t1 AT5G02320 38.000 100 60 2 13 111 75 173 2.66e-15 78.2
MS.gene043336.t1 AT3G55730 47.115 104 52 2 13 115 56 157 4.83e-24 103
MS.gene043336.t1 AT5G02320 44.954 109 57 2 8 115 62 168 6.26e-24 103
MS.gene043336.t1 AT5G02320 38.000 100 60 2 13 111 15 113 3.92e-15 77.4
MS.gene043336.t1 AT2G23290 47.573 103 51 2 13 114 13 113 8.68e-24 101
MS.gene043336.t1 AT4G37260 46.078 102 54 1 13 114 13 113 1.08e-23 101
MS.gene043336.t1 AT1G71030 58.824 68 28 0 50 117 5 72 2.10e-23 97.1
MS.gene043336.t1 AT1G71030 58.824 68 28 0 50 117 19 86 2.42e-23 97.1
MS.gene043336.t1 AT1G73410 48.544 103 50 2 13 114 6 106 2.45e-23 98.2
MS.gene043336.t1 AT1G66380 53.488 86 40 0 8 93 5 90 6.57e-23 93.2
MS.gene043336.t1 AT1G73410 48.544 103 50 2 13 114 6 106 7.42e-23 95.9
MS.gene043336.t1 AT2G39880 46.226 106 48 2 13 114 50 150 8.82e-23 99.4
MS.gene043336.t1 AT4G33450 44.545 110 60 1 12 121 18 126 9.61e-23 97.1
MS.gene043336.t1 AT5G17800 44.118 102 56 1 13 114 93 193 2.95e-22 97.1
MS.gene043336.t1 AT1G18960 43.220 118 55 5 1 115 1 109 7.55e-22 95.5
MS.gene043336.t1 AT4G32730 41.284 109 61 2 8 115 82 188 8.97e-22 98.6
MS.gene043336.t1 AT4G32730 34.579 107 68 2 13 118 35 140 5.99e-14 74.3
MS.gene043336.t1 AT4G32730 41.284 109 61 2 8 115 82 188 8.97e-22 98.6
MS.gene043336.t1 AT4G32730 34.579 107 68 2 13 118 35 140 5.99e-14 74.3
MS.gene043336.t1 AT4G32730 41.284 109 61 2 8 115 82 188 8.97e-22 98.6
MS.gene043336.t1 AT4G32730 34.579 107 68 2 13 118 35 140 5.99e-14 74.3
MS.gene043336.t1 AT4G32730 41.284 109 61 2 8 115 82 188 8.97e-22 98.6
MS.gene043336.t1 AT4G32730 34.579 107 68 2 13 118 35 140 5.99e-14 74.3
MS.gene043336.t1 AT3G29020 36.054 147 87 4 13 157 67 208 1.10e-21 95.1
MS.gene043336.t1 AT4G32730 41.284 109 61 2 8 115 82 188 1.19e-21 97.8
MS.gene043336.t1 AT4G32730 34.579 107 68 2 13 118 35 140 7.44e-14 73.9
MS.gene043336.t1 AT1G22640 60.000 60 24 0 57 116 1 60 1.34e-21 92.4
MS.gene043336.t1 AT3G29020 37.984 129 76 3 13 139 65 191 2.16e-21 92.8
MS.gene043336.t1 AT2G25230 44.248 113 55 4 13 124 26 131 2.39e-21 92.4
MS.gene043336.t1 AT2G37630 36.232 138 74 3 16 151 7 132 1.19e-18 87.4
MS.gene043336.t1 AT5G40430 40.517 116 60 5 11 125 52 159 2.21e-18 84.7
MS.gene043336.t1 AT5G39700 41.905 105 54 2 12 113 55 155 1.43e-17 80.9
MS.gene043336.t1 AT4G00540 40.367 109 59 3 11 115 101 207 5.46e-17 82.8
MS.gene043336.t1 AT4G00540 40.367 109 59 3 11 115 99 205 1.05e-16 82.0
MS.gene043336.t1 AT1G14350 38.095 126 68 3 15 139 27 143 1.11e-16 82.0
MS.gene043336.t1 AT1G14350 38.095 126 68 3 15 139 27 143 1.11e-16 82.0
MS.gene043336.t1 AT3G18100 37.113 97 60 1 12 108 545 640 2.62e-15 78.6
MS.gene043336.t1 AT3G18100 37.113 97 60 1 12 108 497 592 4.13e-15 77.8
MS.gene043336.t1 AT2G02820 37.500 112 67 2 15 125 32 141 5.16e-15 77.0
MS.gene043336.t1 AT2G02820 37.500 112 67 2 15 125 32 141 5.22e-15 77.0
MS.gene043336.t1 AT3G18100 37.500 96 59 1 12 107 384 478 5.67e-15 77.4
MS.gene043336.t1 AT3G18100 37.113 97 60 1 12 108 332 427 7.43e-15 77.0
MS.gene043336.t1 AT2G02820 37.500 112 67 2 15 125 32 141 1.10e-14 75.1
MS.gene043336.t1 AT4G25560 56.522 46 20 0 72 117 5 50 1.16e-12 67.4
MS.gene043336.t1 AT5G59780 58.140 43 18 0 72 114 4 46 4.68e-12 64.7
MS.gene043336.t1 AT3G46130 58.140 43 18 0 72 114 4 46 7.92e-12 64.3

Find 73 sgRNAs with CRISPR-Local

Find 249 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAAACTCCTTCAAATTTAT+TGG 0.117024 2.2:+10390068 None:intergenic
TAAAACTCCTTCAAGTTTAT+TGG 0.126920 2.2:+10389594 None:intergenic
TGAAAATGACCTTCCTTTAA+TGG 0.144521 2.2:-10389296 MS.gene043336:CDS
AGGATTTGAGTGAGAATTTC+TGG 0.155231 2.2:-10389417 MS.gene043336:CDS
GATATTTGATTTGCAATATT+AGG 0.201381 2.2:+10390030 None:intergenic
TTTCCATTGTAAGGTGATTA+TGG 0.216947 2.2:+10389359 None:intergenic
ATTATTTGAATTTGAATCTT+TGG 0.220751 2.2:+10390110 None:intergenic
ATGAATAATGCATCCATTAA+AGG 0.221966 2.2:+10389283 None:intergenic
TCCATTGTAGGGTGATTATA+GGG 0.235335 2.2:+10389859 None:intergenic
TTCCATTGTAGGGTGATTAT+AGG 0.248697 2.2:+10389858 None:intergenic
ACTACTATACCTGCAAATTT+AGG 0.249220 2.2:+10393892 None:intergenic
TTATTGGCTTCTTCCAATAT+AGG 0.256671 2.2:+10390084 None:intergenic
ATGAATAATGCATCCATAAA+AGG 0.286876 2.2:+10389673 None:intergenic
TTCAAATAATCACCCTATAT+TGG 0.288064 2.2:-10390097 MS.gene043336:CDS
GACAATCGACTTGCAATATT+AGG 0.293210 2.2:+10389559 None:intergenic
CGTGATTGCTTCAAATTTAC+CGG 0.299900 2.2:-10390226 MS.gene043336:CDS
TATTGGCTTCTTCCAATATA+GGG 0.314144 2.2:+10390085 None:intergenic
GTGATTCTTTACCTCATTAT+CGG 0.317179 2.2:+10390197 None:intergenic
TTCTTGGTTTCTTCCATTGT+AGG 0.324003 2.2:+10389847 None:intergenic
TATGAATTGTCTATCATATA+TGG 0.327989 2.2:+10389886 None:intergenic
TTTAATGGATGCATTATTCA+TGG 0.332906 2.2:-10389281 MS.gene043336:CDS
TGTGAACTGTCTATCATATA+AGG 0.339402 2.2:+10389388 None:intergenic
TAGAAAGTGTCTATCATATA+TGG 0.352614 2.2:+10389619 None:intergenic
CGACAACTACCTAAATTTGC+AGG 0.368724 2.2:-10393901 MS.gene043336:intron
AGATAGTGAACTCGTAATAT+TGG 0.395570 2.2:+10389792 None:intergenic
CTAGGTATGGCTGTTGGAAT+TGG 0.399200 2.2:-10393924 MS.gene043336:CDS
TTCTATGCCAATAAACTTGA+AGG 0.399423 2.2:-10389601 MS.gene043336:CDS
AGAACCCCTTGTGACAATAA+TGG 0.416910 2.2:-10394003 MS.gene043336:CDS
AGGTCATTGTCATCAAGAAT+TGG 0.433113 2.2:+10389463 None:intergenic
GAAGAAGCCAATAAATTTGA+AGG 0.437102 2.2:-10390075 MS.gene043336:CDS
CTTTATAAAACGCTTCTTCA+AGG 0.438316 2.2:+10390164 None:intergenic
TCTTGGTTTCTTCCATTGTA+GGG 0.439231 2.2:+10389848 None:intergenic
GACAATAATGGATTGAGAAA+AGG 0.457500 2.2:-10393991 MS.gene043336:CDS
ATTGCTTATGTAACTAGGTA+TGG 0.467457 2.2:-10393937 MS.gene043336:CDS
AGTTGATTGCTTATGTAACT+AGG 0.476172 2.2:-10393942 MS.gene043336:CDS
CTCAATCCATTATTGTCACA+AGG 0.493237 2.2:+10393997 None:intergenic
CTGAGGCCAAATATCAAAAG+AGG 0.509978 2.2:-10393489 MS.gene043336:CDS
CAAGAGAATCCGCTTGAAGA+TGG 0.512963 2.2:+10389763 None:intergenic
GAAGAAACCAAGAAACTTGA+CGG 0.523731 2.2:-10389838 MS.gene043336:CDS
TGCATTCTCTTGCATAGCAA+TGG 0.528821 2.2:-10389518 MS.gene043336:CDS
TGTATGTTTCCATAAAAGAA+AGG 0.541995 2.2:+10389941 None:intergenic
TGAATGCATCCATAAAATGA+AGG 0.545826 2.2:+10389443 None:intergenic
ACCTCATTATCGGTTCTCCC+CGG 0.550386 2.2:+10390207 None:intergenic
TGGATTCTCATATGATATTG+TGG 0.550630 2.2:+10389483 None:intergenic
GTGGGAAGAGCTGTAGACTA+AGG 0.551758 2.2:-10393524 MS.gene043336:CDS
TTTCAGGGCTTGAAAGGTGT+GGG 0.557460 2.2:-10393542 MS.gene043336:intron
CAATCCATTATTGTCACAAG+GGG 0.566200 2.2:+10393999 None:intergenic
CATGACAAATCGCTTGAAGC+TGG 0.568568 2.2:+10390000 None:intergenic
GTGATTGCTTCAAATTTACC+GGG 0.570836 2.2:-10390225 MS.gene043336:CDS
CAAGAGAATGCACTTGAAGA+TGG 0.571011 2.2:+10389529 None:intergenic
AAGAATATTAAGTCTAAGCG+TGG 0.575339 2.2:-10390144 MS.gene043336:CDS
ATGGATTGAGAAAAGGCACT+TGG 0.575990 2.2:-10393984 MS.gene043336:CDS
ATAATGAGGTAAAGAATCAC+TGG 0.577807 2.2:-10390194 MS.gene043336:CDS
ACCGGGGAGAACCGATAATG+AGG 0.590459 2.2:-10390208 MS.gene043336:CDS
CGATTTGTCATGCATAACAA+TGG 0.591514 2.2:-10389989 MS.gene043336:CDS
CGGTAAATTTGAAGCAATCA+CGG 0.592595 2.2:+10390227 None:intergenic
TCAATCCATTATTGTCACAA+GGG 0.597815 2.2:+10393998 None:intergenic
GTCACAAGGGGTTCTCACCA+TGG 0.605010 2.2:+10394011 None:intergenic
TCTTCGCAACCATCTTCAAG+CGG 0.608733 2.2:-10389772 MS.gene043336:CDS
ATGTAACTAGGTATGGCTGT+TGG 0.609352 2.2:-10393930 MS.gene043336:CDS
CCATTGTAGGGTGATTATAG+GGG 0.613750 2.2:+10389860 None:intergenic
CCCCTATAATCACCCTACAA+TGG 0.613964 2.2:-10389860 MS.gene043336:CDS
TGAGGCCAAATATCAAAAGA+GGG 0.619320 2.2:-10393488 MS.gene043336:CDS
TAAGGTGGATGAACTATCTG+AGG 0.621739 2.2:-10393506 MS.gene043336:CDS
CCATTGTAAGGTGATTATGG+AGG 0.622467 2.2:+10389362 None:intergenic
CCTCCATAATCACCTTACAA+TGG 0.623207 2.2:-10389362 MS.gene043336:CDS
AAAAGGCACTTGGACTCATG+AGG 0.629560 2.2:-10393974 MS.gene043336:CDS
AGGGAACTTTAATCAACAAG+AGG 0.630408 2.2:-10393469 MS.gene043336:CDS
ATAATGCATCCATTAAAGGA+AGG 0.636763 2.2:+10389287 None:intergenic
ATAATGCATCCATAAAAGGA+AGG 0.636763 2.2:+10389677 None:intergenic
ATATTAAGTCTAAGCGTGGA+AGG 0.639098 2.2:-10390140 MS.gene043336:CDS
GGAAGAGCTGTAGACTAAGG+TGG 0.649277 2.2:-10393521 MS.gene043336:CDS
TGATTGCTTCAAATTTACCG+GGG 0.729789 2.2:-10390224 MS.gene043336:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTAATATTTTAAATTATT+AGG - chr2.2:10392973-10392992 MS.gene043336:intron 0.0%
!! AAAAAAAAAAAATTCATTGT+TGG + chr2.2:10390079-10390098 None:intergenic 10.0%
!! AAATTTGAAAAAAAAAACAT+AGG - chr2.2:10392714-10392733 MS.gene043336:intron 10.0%
!! AATTTGAAAAAAAAAACATA+GGG - chr2.2:10392715-10392734 MS.gene043336:intron 10.0%
!! ACTAATATAATATTGTAAAT+AGG + chr2.2:10390845-10390864 None:intergenic 10.0%
!! ATTAAGAATAATTATCTTTA+TGG + chr2.2:10389633-10389652 None:intergenic 10.0%
!! CAAAAATCTAAATTAATTTA+AGG + chr2.2:10392292-10392311 None:intergenic 10.0%
!! TTAATAATTAATGTGTAAAT+TGG - chr2.2:10389648-10389667 MS.gene043336:CDS 10.0%
!!! TTTAATATAACTTTACTTTT+AGG - chr2.2:10390890-10390909 MS.gene043336:intron 10.0%
!! AGAATATATATAAAAGTGAA+TGG + chr2.2:10391945-10391964 None:intergenic 15.0%
!! ATTATTTGAATTTGAATCTT+TGG + chr2.2:10393172-10393191 None:intergenic 15.0%
!! ATTTGAAAAAAAAAACATAG+GGG - chr2.2:10392716-10392735 MS.gene043336:intron 15.0%
!! TGGATAAAGTTAAAATTATA+AGG - chr2.2:10392911-10392930 MS.gene043336:intron 15.0%
!! TTGCATATATTTAATTAGTT+TGG - chr2.2:10391572-10391591 MS.gene043336:intron 15.0%
!!! AAAACACTTTTTTTTTTTGA+AGG + chr2.2:10392949-10392968 None:intergenic 15.0%
!!! AATAAATTAACATACTTTTG+TGG - chr2.2:10389948-10389967 MS.gene043336:CDS 15.0%
!!! AGTTTGTTTAGTTAATTTTT+AGG - chr2.2:10391723-10391742 MS.gene043336:intron 15.0%
!!! ATAATATCATAAATTTTCGT+TGG - chr2.2:10389429-10389448 MS.gene043336:CDS 15.0%
!!! ATTTTGTGTATTTTTATACA+AGG - chr2.2:10390732-10390751 MS.gene043336:intron 15.0%
!!! CAAATTTGAAATTGTTTATT+TGG + chr2.2:10392701-10392720 None:intergenic 15.0%
!!! GTTTGTTTAGTTAATTTTTA+GGG - chr2.2:10391724-10391743 MS.gene043336:intron 15.0%
!!! TTTTAAATTAATTTTCTCTC+AGG - chr2.2:10389564-10389583 MS.gene043336:CDS 15.0%
!! AAATGGCATAATATATCAAA+AGG + chr2.2:10391975-10391994 None:intergenic 20.0%
!! ACTAACTTACAAACATAAAA+GGG + chr2.2:10391184-10391203 None:intergenic 20.0%
!! AGATAAGCAAAATAAAGTTA+TGG - chr2.2:10392765-10392784 MS.gene043336:intron 20.0%
!! ATGTTAATTTATTCTCTTTG+AGG + chr2.2:10389941-10389960 None:intergenic 20.0%
!! CAATCTTATTATCAAACAAT+TGG + chr2.2:10391146-10391165 None:intergenic 20.0%
!! GTTAGATAACAAATAAATCT+TGG + chr2.2:10392147-10392166 None:intergenic 20.0%
!! TAAAACTCCTTCAAATTTAT+TGG + chr2.2:10393214-10393233 None:intergenic 20.0%
!! TAAATAGAATTCTCTTACAA+AGG + chr2.2:10392821-10392840 None:intergenic 20.0%
!! TACTAACTTACAAACATAAA+AGG + chr2.2:10391185-10391204 None:intergenic 20.0%
!! TATGAATTGTCTATCATATA+TGG + chr2.2:10393396-10393415 None:intergenic 20.0%
!! TTATTATCAAACAATTGGTT+TGG + chr2.2:10391141-10391160 None:intergenic 20.0%
!!! AAATAGAGAAATTTTGTAAG+AGG + chr2.2:10392058-10392077 None:intergenic 20.0%
!!! ACAATTTTAGTGAGAATTTT+TGG - chr2.2:10393364-10393383 MS.gene043336:intron 20.0%
!!! ACTCATGAAACTTATATTTT+AGG - chr2.2:10390673-10390692 MS.gene043336:intron 20.0%
!!! ATTATGCCATTTGATATTAT+TGG - chr2.2:10391983-10392002 MS.gene043336:intron 20.0%
!!! ATTTTTCACAAACACATTAT+GGG + chr2.2:10391263-10391282 None:intergenic 20.0%
!!! TATATTTTAGGATTGTTTGT+TGG - chr2.2:10390685-10390704 MS.gene043336:intron 20.0%
!!! TGAAATGTTTCTATATATGA+AGG + chr2.2:10389988-10390007 None:intergenic 20.0%
!!! TTGTTTGTTATATTCAACAT+CGG + chr2.2:10392181-10392200 None:intergenic 20.0%
!!! TTTGAAAGTTCTAATACATA+TGG - chr2.2:10392891-10392910 MS.gene043336:intron 20.0%
!!! TTTGATTCTTTTGGATAATT+TGG - chr2.2:10391222-10391241 MS.gene043336:intron 20.0%
! AAAAAAAATTCATTGTTGGC+TGG + chr2.2:10390075-10390094 None:intergenic 25.0%
! AATATATCAACACTCTATCA+TGG - chr2.2:10389878-10389897 MS.gene043336:CDS 25.0%
! AATGATTTATAAAGTGCAGA+TGG - chr2.2:10393028-10393047 MS.gene043336:intron 25.0%
! AATTATTGTAAACCAGTTGA+TGG + chr2.2:10392256-10392275 None:intergenic 25.0%
! ACAAACAAAACATTCACATT+TGG - chr2.2:10392193-10392212 MS.gene043336:intron 25.0%
! AGACATACACTATACATATT+TGG + chr2.2:10390182-10390201 None:intergenic 25.0%
! AGAGTTCCAATAATATCAAA+TGG + chr2.2:10391992-10392011 None:intergenic 25.0%
! AGGTATAGTAGTATAAGAAA+AGG - chr2.2:10389398-10389417 MS.gene043336:CDS 25.0%
! ATCAAACTTCATGAAAAACT+GGG - chr2.2:10389844-10389863 MS.gene043336:CDS 25.0%
! ATGAATAATGCATCCATAAA+AGG + chr2.2:10393609-10393628 None:intergenic 25.0%
! ATGAATAATGCATCCATTAA+AGG + chr2.2:10393999-10394018 None:intergenic 25.0%
! ATTCAAATATGTCTTCAACA+AGG + chr2.2:10391286-10391305 None:intergenic 25.0%
! CCAAACACATTATTGAAAAT+TGG - chr2.2:10390607-10390626 MS.gene043336:intron 25.0%
! TGTATGTTTCCATAAAAGAA+AGG + chr2.2:10393341-10393360 None:intergenic 25.0%
! TTCAAATAATCACCCTATAT+TGG - chr2.2:10393182-10393201 MS.gene043336:intron 25.0%
! TTTATGAGTAGATTTCTTCT+AGG - chr2.2:10390941-10390960 MS.gene043336:intron 25.0%
! TTTCAATAATGTGTTTGGTT+CGG + chr2.2:10390605-10390624 None:intergenic 25.0%
!! AAAATTTTCATGTGATGTTG+TGG + chr2.2:10393955-10393974 None:intergenic 25.0%
!! AAGTAACATTTTCCATTGTA+AGG + chr2.2:10393932-10393951 None:intergenic 25.0%
!! AATCAATTGATTCTTCTCTT+TGG - chr2.2:10391356-10391375 MS.gene043336:intron 25.0%
!! AATTTCTCTATTTGTTAGAG+AGG - chr2.2:10392065-10392084 MS.gene043336:intron 25.0%
!! ATCATAAATTTTCGTTGGAT+AGG - chr2.2:10389434-10389453 MS.gene043336:CDS 25.0%
!! CATGAAAATTCAGTTTTTGA+TGG - chr2.2:10393573-10393592 MS.gene043336:intron 25.0%
!! CCAATTTTCAATAATGTGTT+TGG + chr2.2:10390610-10390629 None:intergenic 25.0%
!! CTCTATTTGTTCTTCTATTT+TGG - chr2.2:10391549-10391568 MS.gene043336:intron 25.0%
!! GATTTTTCACAAACACATTA+TGG + chr2.2:10391264-10391283 None:intergenic 25.0%
!! GGATGATTTTATGATTATGT+GGG - chr2.2:10390706-10390725 MS.gene043336:intron 25.0%
!! TAAAACTCCTTCAAGTTTAT+TGG + chr2.2:10393688-10393707 None:intergenic 25.0%
!! TAAGTTTGTTTGTTCAAAGT+GGG + chr2.2:10390225-10390244 None:intergenic 25.0%
!! TGAATTTTCATGTGATATAG+TGG + chr2.2:10393565-10393584 None:intergenic 25.0%
!! TGGATGATTTTATGATTATG+TGG - chr2.2:10390705-10390724 MS.gene043336:intron 25.0%
!! TTCTTTTATGGAAACATACA+TGG - chr2.2:10393341-10393360 MS.gene043336:intron 25.0%
!! TTTAATGGATGCATTATTCA+TGG - chr2.2:10393998-10394017 MS.gene043336:CDS 25.0%
!! TTTTATGGATGCATTATTCA+TGG - chr2.2:10393608-10393627 MS.gene043336:intron 25.0%
!!! AAACATTTGCTATTTAAGAG+AGG + chr2.2:10390151-10390170 None:intergenic 25.0%
!!! AAGAACTCTTTTGATTCTTT+TGG - chr2.2:10391213-10391232 MS.gene043336:intron 25.0%
!!! TAGAAAGTGTCTATCATATA+TGG + chr2.2:10393663-10393682 None:intergenic 25.0%
!!! TTATAAAAGAGCCTTTTTTG+TGG - chr2.2:10390474-10390493 MS.gene043336:intron 25.0%
!!! TTGAACATTACGCTTTATTT+TGG - chr2.2:10390755-10390774 MS.gene043336:intron 25.0%
AACAAAACATTCACATTTGG+TGG - chr2.2:10392196-10392215 MS.gene043336:intron 30.0%
AACAATTCTCTCGAGTTTAA+AGG + chr2.2:10389718-10389737 None:intergenic 30.0%
AACATACGACATTGAATGAT+TGG + chr2.2:10389485-10389504 None:intergenic 30.0%
AAGAATATTAAGTCTAAGCG+TGG - chr2.2:10393135-10393154 MS.gene043336:intron 30.0%
ACAAATAAATCTTGGCACTT+AGG + chr2.2:10392139-10392158 None:intergenic 30.0%
ACTACTATACCTGCAAATTT+AGG + chr2.2:10389390-10389409 None:intergenic 30.0%
AGATAGTGAACTCGTAATAT+TGG + chr2.2:10393490-10393509 None:intergenic 30.0%
AGTTGATTGCTTATGTAACT+AGG - chr2.2:10389337-10389356 MS.gene043336:CDS 30.0%
ATAATGAGGTAAAGAATCAC+TGG - chr2.2:10393085-10393104 MS.gene043336:intron 30.0%
ATAATGCATCCATAAAAGGA+AGG + chr2.2:10393605-10393624 None:intergenic 30.0%
ATAATGCATCCATTAAAGGA+AGG + chr2.2:10393995-10394014 None:intergenic 30.0%
ATTAACAAAGAGAGAAACCA+AGG + chr2.2:10391339-10391358 None:intergenic 30.0%
ATTGCTTATGTAACTAGGTA+TGG - chr2.2:10389342-10389361 MS.gene043336:CDS 30.0%
CATCAAACTTCATGAAAAAC+TGG - chr2.2:10389843-10389862 MS.gene043336:CDS 30.0%
CGTGTTCATAAAAAATCCAT+GGG + chr2.2:10389909-10389928 None:intergenic 30.0%
CTAATCTTTCTTCTCAATGT+TGG - chr2.2:10391393-10391412 MS.gene043336:intron 30.0%
CTTATATTCAAGACCAAAGA+AGG - chr2.2:10392453-10392472 MS.gene043336:intron 30.0%
CTTTATAAAACGCTTCTTCA+AGG + chr2.2:10393118-10393137 None:intergenic 30.0%
GAAAAATTGGACCACAAAAA+AGG + chr2.2:10390488-10390507 None:intergenic 30.0%
GAAAGTTTCACATATTAGAG+TGG + chr2.2:10392117-10392136 None:intergenic 30.0%
GAAGAAGCCAATAAATTTGA+AGG - chr2.2:10393204-10393223 MS.gene043336:intron 30.0%
GAATAAGACAAGAAACTCAA+TGG - chr2.2:10392518-10392537 MS.gene043336:intron 30.0%
GATTAGATTTCTCACTTTAG+TGG - chr2.2:10391448-10391467 MS.gene043336:intron 30.0%
GCTAACAATGATACAAATCA+AGG + chr2.2:10391002-10391021 None:intergenic 30.0%
GTGATTCTTTACCTCATTAT+CGG + chr2.2:10393085-10393104 None:intergenic 30.0%
TAAGATTGAGCTTATGCTAT+TGG - chr2.2:10391158-10391177 MS.gene043336:intron 30.0%
TCAATCCATTATTGTCACAA+GGG + chr2.2:10389284-10389303 None:intergenic 30.0%
TCATAAAAAATCCATGGGTT+AGG + chr2.2:10389904-10389923 None:intergenic 30.0%
TCGGAAAGAAGAAGAAAAAT+TGG + chr2.2:10390501-10390520 None:intergenic 30.0%
TCGTGTTCATAAAAAATCCA+TGG + chr2.2:10389910-10389929 None:intergenic 30.0%
TGAAAATGACCTTCCTTTAA+TGG - chr2.2:10393983-10394002 MS.gene043336:CDS 30.0%
TGAATGCATCCATAAAATGA+AGG + chr2.2:10393839-10393858 None:intergenic 30.0%
TGGATTCTCATATGATATTG+TGG + chr2.2:10393799-10393818 None:intergenic 30.0%
TGTGAACTGTCTATCATATA+AGG + chr2.2:10393894-10393913 None:intergenic 30.0%
TTCATGAAAAACTGGGTAAT+AGG - chr2.2:10389851-10389870 MS.gene043336:CDS 30.0%
TTCTATGCCAATAAACTTGA+AGG - chr2.2:10393678-10393697 MS.gene043336:intron 30.0%
TTGTAATAAGCTCAAAGCTT+TGG - chr2.2:10391753-10391772 MS.gene043336:intron 30.0%
TTTCCATTGTAAGGTGATTA+TGG + chr2.2:10393923-10393942 None:intergenic 30.0%
TTTCTATATATGAAGGCAAG+AGG + chr2.2:10389981-10390000 None:intergenic 30.0%
! AAGTTCCCTCTTTTGATATT+TGG + chr2.2:10389799-10389818 None:intergenic 30.0%
! AAGTTTGTTTGTTCAAAGTG+GGG + chr2.2:10390224-10390243 None:intergenic 30.0%
! CTAAGTTTGTTTGTTCAAAG+TGG + chr2.2:10390226-10390245 None:intergenic 30.0%
! TGACAATGACCTTCATTTTA+TGG - chr2.2:10393827-10393846 MS.gene043336:intron 30.0%
! TTTTATGGATGCATTCATAG+AGG - chr2.2:10393842-10393861 MS.gene043336:intron 30.0%
!! GACAATAATGGATTGAGAAA+AGG - chr2.2:10389288-10389307 MS.gene043336:CDS 30.0%
!! TATTGGCTTCTTCCAATATA+GGG + chr2.2:10393197-10393216 None:intergenic 30.0%
!! TGATAGTGACCTTTCTTTTA+TGG - chr2.2:10393329-10393348 MS.gene043336:intron 30.0%
!! TTATTGGCTTCTTCCAATAT+AGG + chr2.2:10393198-10393217 None:intergenic 30.0%
!!! TCACTTTAGTGGCTTTTTTT+TGG - chr2.2:10391459-10391478 MS.gene043336:intron 30.0%
!!! TTGCGTTTTTAAGTGTGAAT+CGG - chr2.2:10390338-10390357 MS.gene043336:intron 30.0%
AAAAACTCCGTCAAGTTTCT+TGG + chr2.2:10393451-10393470 None:intergenic 35.0%
AACATCAACCCCATTGATAT+AGG - chr2.2:10391098-10391117 MS.gene043336:intron 35.0%
AAGAAACTCAATGGATGAGA+TGG - chr2.2:10392527-10392546 MS.gene043336:intron 35.0%
AGAAACTCAATGGATGAGAT+GGG - chr2.2:10392528-10392547 MS.gene043336:intron 35.0%
AGGATTTGAGTGAGAATTTC+TGG - chr2.2:10393862-10393881 MS.gene043336:intron 35.0%
AGGGAACTTTAATCAACAAG+AGG - chr2.2:10389810-10389829 MS.gene043336:CDS 35.0%
AGGTCATTGTCATCAAGAAT+TGG + chr2.2:10393819-10393838 None:intergenic 35.0%
AGTTTCACATATTAGAGTGG+TGG + chr2.2:10392114-10392133 None:intergenic 35.0%
ATATTAAGTCTAAGCGTGGA+AGG - chr2.2:10393139-10393158 MS.gene043336:intron 35.0%
CAATCCATTATTGTCACAAG+GGG + chr2.2:10389283-10389302 None:intergenic 35.0%
CACACGTTTAATGAGCTTAT+GGG + chr2.2:10390524-10390543 None:intergenic 35.0%
CCGAACAAAATCAGTGAAAT+CGG - chr2.2:10390413-10390432 MS.gene043336:intron 35.0%
CGATTTGTCATGCATAACAA+TGG - chr2.2:10393290-10393309 MS.gene043336:intron 35.0%
CGTGATTGCTTCAAATTTAC+CGG - chr2.2:10393053-10393072 MS.gene043336:intron 35.0%
CTCAATCCATTATTGTCACA+AGG + chr2.2:10389285-10389304 None:intergenic 35.0%
CTTAGGTGATCACATAAAGA+AGG + chr2.2:10392020-10392039 None:intergenic 35.0%
CTTCTTTATGTGATCACCTA+AGG - chr2.2:10392018-10392037 MS.gene043336:intron 35.0%
GAAGAAACCAAGAAACTTGA+CGG - chr2.2:10393441-10393460 MS.gene043336:CDS 35.0%
GGTCGTTTAAGTGTAATCTA+TGG + chr2.2:10390584-10390603 None:intergenic 35.0%
GGTGAAATATGTCTAACCTT+AGG + chr2.2:10392037-10392056 None:intergenic 35.0%
GTGATTGCTTCAAATTTACC+GGG - chr2.2:10393054-10393073 MS.gene043336:intron 35.0%
TCACCATTCAATAGCTATGA+GGG + chr2.2:10390257-10390276 None:intergenic 35.0%
TCCATTGTAGGGTGATTATA+GGG + chr2.2:10393423-10393442 None:intergenic 35.0%
TCGACTCAACCTATATCAAT+GGG + chr2.2:10391110-10391129 None:intergenic 35.0%
TCTATGGAAGATGAGTTGTT+TGG + chr2.2:10390568-10390587 None:intergenic 35.0%
TCTTGGTTTCTTCCATTGTA+GGG + chr2.2:10393434-10393453 None:intergenic 35.0%
TGAGGCCAAATATCAAAAGA+GGG - chr2.2:10389791-10389810 MS.gene043336:CDS 35.0%
TGATTGCTTCAAATTTACCG+GGG - chr2.2:10393055-10393074 MS.gene043336:intron 35.0%
TTCCATTGTAGGGTGATTAT+AGG + chr2.2:10393424-10393443 None:intergenic 35.0%
TTCTTGGTTTCTTCCATTGT+AGG + chr2.2:10393435-10393454 None:intergenic 35.0%
TTGATGTTGGATCTATGTAG+CGG + chr2.2:10391086-10391105 None:intergenic 35.0%
TTTCCCTCATAGCTATTGAA+TGG - chr2.2:10390251-10390270 MS.gene043336:intron 35.0%
! AACTCGAGAGAATTGTTTTC+AGG - chr2.2:10389721-10389740 MS.gene043336:CDS 35.0%
! ACTCGAGAGAATTGTTTTCA+GGG - chr2.2:10389722-10389741 MS.gene043336:CDS 35.0%
! ACTCGTACGATTTTACTAGT+CGG - chr2.2:10390916-10390935 MS.gene043336:intron 35.0%
! CGGTAAATTTGAAGCAATCA+CGG + chr2.2:10393055-10393074 None:intergenic 35.0%
! GACATTGAATGATTGGTCAT+TGG + chr2.2:10389478-10389497 None:intergenic 35.0%
! TTGTTGGCTGGTAACAATTT+CGG + chr2.2:10390063-10390082 None:intergenic 35.0%
!! AATTGTTTTCAGGGCTTGAA+AGG - chr2.2:10389731-10389750 MS.gene043336:CDS 35.0%
!! ACCAAAGAAGGTATCTCTTT+AGG - chr2.2:10392465-10392484 MS.gene043336:intron 35.0%
!! AGAAAGCATTCCTAACGATA+TGG + chr2.2:10391054-10391073 None:intergenic 35.0%
!! CCAAAGAAGGTATCTCTTTA+GGG - chr2.2:10392466-10392485 MS.gene043336:intron 35.0%
!! CTTTGTTGATTCTTCCCATT+TGG - chr2.2:10391643-10391662 MS.gene043336:intron 35.0%
!! GACAATCGACTTGCAATATT+AGG + chr2.2:10393723-10393742 None:intergenic 35.0%
!! TATATCAATGGGGTTGATGT+TGG + chr2.2:10391099-10391118 None:intergenic 35.0%
!!! CCGATTTCACTGATTTTGTT+CGG + chr2.2:10390416-10390435 None:intergenic 35.0%
AACAAAGAGAGAAACCAAGG+AGG + chr2.2:10391336-10391355 None:intergenic 40.0%
AAGCATTCCTAACGATATGG+AGG + chr2.2:10391051-10391070 None:intergenic 40.0%
ACAAAGAGAGAAACCAAGGA+GGG + chr2.2:10391335-10391354 None:intergenic 40.0%
ACTAACTTCTCACCATCAAC+TGG - chr2.2:10392241-10392260 MS.gene043336:intron 40.0%
AGAACCCCTTGTGACAATAA+TGG - chr2.2:10389276-10389295 MS.gene043336:CDS 40.0%
AGAGAGGCAATCTATGAGAA+TGG + chr2.2:10390135-10390154 None:intergenic 40.0%
ATGTAACTAGGTATGGCTGT+TGG - chr2.2:10389349-10389368 MS.gene043336:CDS 40.0%
CAAGAGAATGCACTTGAAGA+TGG + chr2.2:10393753-10393772 None:intergenic 40.0%
CCACACGTTTAATGAGCTTA+TGG + chr2.2:10390525-10390544 None:intergenic 40.0%
CCATAAGCTCATTAAACGTG+TGG - chr2.2:10390522-10390541 MS.gene043336:intron 40.0%
CCATTGTAAGGTGATTATGG+AGG + chr2.2:10393920-10393939 None:intergenic 40.0%
CCATTGTAGGGTGATTATAG+GGG + chr2.2:10393422-10393441 None:intergenic 40.0%
CCCTAAAGAGATACCTTCTT+TGG + chr2.2:10392469-10392488 None:intergenic 40.0%
CCTCCATAATCACCTTACAA+TGG - chr2.2:10393917-10393936 MS.gene043336:CDS 40.0%
CGACAACTACCTAAATTTGC+AGG - chr2.2:10389378-10389397 MS.gene043336:CDS 40.0%
CGACTCAACCTATATCAATG+GGG + chr2.2:10391109-10391128 None:intergenic 40.0%
CGTTTAATGAGCTTATGGGT+CGG + chr2.2:10390520-10390539 None:intergenic 40.0%
CTGAGGCCAAATATCAAAAG+AGG - chr2.2:10389790-10389809 MS.gene043336:CDS 40.0%
GAGAATTCTTTGCAGTATCC+TGG + chr2.2:10389611-10389630 None:intergenic 40.0%
GGTATAAGTGCTTCTCTAGT+TGG - chr2.2:10391690-10391709 MS.gene043336:intron 40.0%
GTCACCATTCAATAGCTATG+AGG + chr2.2:10390258-10390277 None:intergenic 40.0%
TAAGGTGGATGAACTATCTG+AGG - chr2.2:10389773-10389792 MS.gene043336:CDS 40.0%
TATGCGCTATCTCAGTATCT+TGG - chr2.2:10389684-10389703 MS.gene043336:CDS 40.0%
TGCATTCTCTTGCATAGCAA+TGG - chr2.2:10393761-10393780 MS.gene043336:intron 40.0%
TGTTGCATCGTGAGTTTGAA+GGG - chr2.2:10391857-10391876 MS.gene043336:intron 40.0%
TTGTTGCATCGTGAGTTTGA+AGG - chr2.2:10391856-10391875 MS.gene043336:intron 40.0%
! GTCGACTCAACCTATATCAA+TGG + chr2.2:10391111-10391130 None:intergenic 40.0%
! TGGCAATGACCTTCCTTTTA+TGG - chr2.2:10393593-10393612 MS.gene043336:intron 40.0%
! TGTTGGCTGGTAACAATTTC+GGG + chr2.2:10390062-10390081 None:intergenic 40.0%
! TTTCTTCCGTTTTGCTACCA+TGG - chr2.2:10390105-10390124 MS.gene043336:CDS 40.0%
!! ATGGATTGAGAAAAGGCACT+TGG - chr2.2:10389295-10389314 MS.gene043336:CDS 40.0%
!! GGTCATGTGACTTGTTCTAT+TGG + chr2.2:10391030-10391049 None:intergenic 40.0%
!! GTATCTCTTTAGGGTTCGTT+TGG - chr2.2:10392475-10392494 MS.gene043336:intron 40.0%
!!! CGTTTTTAAGTGTGAATCGG+TGG - chr2.2:10390341-10390360 MS.gene043336:intron 40.0%
ATCAGAGCTTGCAGATTGAG+CGG - chr2.2:10390383-10390402 MS.gene043336:intron 45.0%
ATGCTTCTCTCTATGGCTGA+TGG - chr2.2:10391669-10391688 MS.gene043336:intron 45.0%
CAAGAGAATCCGCTTGAAGA+TGG + chr2.2:10393519-10393538 None:intergenic 45.0%
CACATGACCTCCATATCGTT+AGG - chr2.2:10391041-10391060 MS.gene043336:intron 45.0%
CATGACAAATCGCTTGAAGC+TGG + chr2.2:10393282-10393301 None:intergenic 45.0%
CCCCTATAATCACCCTACAA+TGG - chr2.2:10393419-10393438 MS.gene043336:intron 45.0%
CTAGGTATGGCTGTTGGAAT+TGG - chr2.2:10389355-10389374 MS.gene043336:CDS 45.0%
CTTTGTTCCAACAGAACTCC+AGG - chr2.2:10389590-10389609 MS.gene043336:CDS 45.0%
TCTATGAGAATGGCAAGCCA+TGG + chr2.2:10390125-10390144 None:intergenic 45.0%
TCTTCGCAACCATCTTCAAG+CGG - chr2.2:10393507-10393526 MS.gene043336:CDS 45.0%
TTGGCTGATGCTTCTCTCTA+TGG - chr2.2:10391662-10391681 MS.gene043336:intron 45.0%
! TATAGGTTGAGTCGACGACT+TGG - chr2.2:10391115-10391134 MS.gene043336:intron 45.0%
! TTTCAGGGCTTGAAAGGTGT+GGG - chr2.2:10389737-10389756 MS.gene043336:CDS 45.0%
!! AAAAGGCACTTGGACTCATG+AGG - chr2.2:10389305-10389324 MS.gene043336:CDS 45.0%
!! AGAGAGAAGCATCAGCCAAA+TGG + chr2.2:10391661-10391680 None:intergenic 45.0%
!! GAGAGAAGCATCAGCCAAAT+GGG + chr2.2:10391660-10391679 None:intergenic 45.0%
!! GCTGGTAACAATTTCGGGTT+GGG + chr2.2:10390057-10390076 None:intergenic 45.0%
!! TCTCTTTAGGGTTCGTTTGG+TGG - chr2.2:10392478-10392497 MS.gene043336:intron 45.0%
!! TTTTCAGGGCTTGAAAGGTG+TGG - chr2.2:10389736-10389755 MS.gene043336:CDS 45.0%
!! AAAAATCTAAATTAATTTAA+GGG + chr2.2:10392291-10392310 None:intergenic 5.0%
!!! AAAAATATCAAAAATTATTT+TGG + chr2.2:10392622-10392641 None:intergenic 5.0%
!!! TTAATATTTCATTAAATTTT+AGG + chr2.2:10392645-10392664 None:intergenic 5.0%
AAGAGAGAAACCAAGGAGGG+AGG + chr2.2:10391332-10391351 None:intergenic 50.0%
AGAGAGAAACCAAGGAGGGA+GGG + chr2.2:10391331-10391350 None:intergenic 50.0%
CTCTATCATGGCCTAACCCA+TGG - chr2.2:10389890-10389909 MS.gene043336:CDS 50.0%
GCAGTATCCTGGAGTTCTGT+TGG + chr2.2:10389600-10389619 None:intergenic 50.0%
GGAAGAGCTGTAGACTAAGG+TGG - chr2.2:10389758-10389777 MS.gene043336:CDS 50.0%
GGCAAGCCATGGTAGCAAAA+CGG + chr2.2:10390114-10390133 None:intergenic 50.0%
GGGGCTGTCAAGTGTACAAA+CGG + chr2.2:10390205-10390224 None:intergenic 50.0%
GTGGGAAGAGCTGTAGACTA+AGG - chr2.2:10389755-10389774 MS.gene043336:CDS 50.0%
! GGCTGGTAACAATTTCGGGT+TGG + chr2.2:10390058-10390077 None:intergenic 50.0%
!! ACCTCATTATCGGTTCTCCC+CGG + chr2.2:10393075-10393094 None:intergenic 50.0%
!! GCTCAAAGCTTTGGCTTGAG+TGG - chr2.2:10391762-10391781 MS.gene043336:intron 50.0%
ACCGGGGAGAACCGATAATG+AGG - chr2.2:10393071-10393090 MS.gene043336:intron 55.0%
AGAAACCAAGGAGGGAGGGA+GGG + chr2.2:10391327-10391346 None:intergenic 55.0%
GAGAAACCAAGGAGGGAGGG+AGG + chr2.2:10391328-10391347 None:intergenic 60.0%
TCTCTCCCTCCCTCCCTCCT+TGG - chr2.2:10391319-10391338 MS.gene043336:intron 65.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 10389270 10394031 10389270 ID=MS.gene043336
chr2.2 mRNA 10389270 10394031 10389270 ID=MS.gene043336.t1;Parent=MS.gene043336
chr2.2 exon 10393902 10394031 10393902 ID=MS.gene043336.t1.exon1;Parent=MS.gene043336.t1
chr2.2 CDS 10393902 10394031 10393902 ID=cds.MS.gene043336.t1;Parent=MS.gene043336.t1
chr2.2 exon 10393429 10393558 10393429 ID=MS.gene043336.t1.exon2;Parent=MS.gene043336.t1
chr2.2 CDS 10393429 10393558 10393429 ID=cds.MS.gene043336.t1;Parent=MS.gene043336.t1
chr2.2 exon 10389270 10390254 10389270 ID=MS.gene043336.t1.exon3;Parent=MS.gene043336.t1
chr2.2 CDS 10389270 10390254 10389270 ID=cds.MS.gene043336.t1;Parent=MS.gene043336.t1
Gene Sequence

>MS.gene043336

ATGGTGAGAACCCCTTGTGACAATAATGGATTGAGAAAAGGCACTTGGACTCATGAGGAAGACAAAAAGTTGATTGCTTATGTAACTAGGTATGGCTGTTGGAATTGGCGACAACTACCTAAATTTGCAGGTATAGTAGTATAAGAAAAGGTGAACACTATAATATCATAAATTTTCGTTGGATAGGTATCTCTTACATGTTACTCCAATGACCAATCATTCAATGTCGTATGTTACTTTTCATATTTAATTATTTTAATTTAAAAAAAAAATTTATTTTGAAATAAATTTAAATTTTAAATTAATTTTCTCTCAGGATACTTTGTTCCAACAGAACTCCAGGATACTGCAAAGAATTCTCCATAAAGATAATTATTCTTAATAATTAATGTGTAAATTGGTTTTCGTTTAGTTTATGCGCTATCTCAGTATCTTGGAATTCAATCCTTTAAACTCGAGAGAATTGTTTTCAGGGCTTGAAAGGTGTGGGAAGAGCTGTAGACTAAGGTGGATGAACTATCTGAGGCCAAATATCAAAAGAGGGAACTTTAATCAACAAGAGGAAGATGTTATCATCAAACTTCATGAAAAACTGGGTAATAGGTATCAATATATCAACACTCTATCATGGCCTAACCCATGGATTTTTTATGAACACGAACAACGCACCTCAAAGAGAATAAATTAACATACTTTTGTGGTTTGATGCCTCTTGCCTTCATATATAGAAACATTTCAATATAATTTATTCATTATCTCAAATAACATTACACTATGATTACTACCCAACCCGAAATTGTTACCAGCCAACAATGAATTTTTTTTTTTTTTTTGTTTTCTTCCGTTTTGCTACCATGGCTTGCCATTCTCATAGATTGCCTCTCTTAAATAGCAAATGTTTAATCTATGCCAAATATGTATAGTGTATGTCTCCGTTTGTACACTTGACAGCCCCACTTTGAACAAACAAACTTAGTTATGTTTCCCTCATAGCTATTGAATGGTGACACTACATATGTATTTGTATTTTTCTCAAACTCTAGTGTTAACTCGTAAACTCAAGTGAGTTTGCGTTTTTAAGTGTGAATCGGTGGTAAACTTGTTTACAGTGAAATCAGAGCTTGCAGATTGAGCGGTTTAACTCCGAACAAAATCAGTGAAATCGGATAAATTCATTTGATTTTAACTGAGTTTTTGATTTTATTTATAAAAGAGCCTTTTTTGTGGTCCAATTTTTCTTCTTCTTTCCGACCCATAAGCTCATTAAACGTGTGGAAATGCACTGCTTTCAATAACCAAACAACTCATCTTCCATAGATTACACTTAAACGACCGAACCAAACACATTATTGAAAATTGGTGAAACTTTAACTTTAGTTTTTATTATTATAGTTTTACTAACAACTCATGAAACTTATATTTTAGGATTGTTTGTTGGATGATTTTATGATTATGTGGGATAATTTTGTGTATTTTTATACAAGGTTGAACATTACGCTTTATTTTGGAGATTATATATACTTTGAATTTATAATTAAGTTAATATTTTTTTTTTAACTATTGACATATTTACCTATTTACAATATTATATTAGTATATATGTCATGTATATATAATAATTTTAATATAACTTTACTTTTAGGTAAACTCGTACGATTTTACTAGTCGGAGTTTATGAGTAGATTTCTTCTAGGCAAAATGATTTGAAATAAAAACTTGAATCAGACAACCTTGATTTGTATCATTGTTAGCAACAACCAATAGAACAAGTCACATGACCTCCATATCGTTAGGAATGCTTTCTATACAAAAACCGCTACATAGATCCAACATCAACCCCATTGATATAGGTTGAGTCGACGACTTGGCCAAACCAATTGTTTGATAATAAGATTGAGCTTATGCTATTGGCCCTTTTATGTTTGTAAGTTAGTAGATTTGTAAAGAACTCTTTTGATTCTTTTGGATAATTTGGTAAGTCAAGTTATTGCCCATAATGTGTTTGTGAAAAATCCTTGTTGAAGACATATTTGAATTTTTTTTTGTCTCTCTCTCCCTCCCTCCCTCCTTGGTTTCTCTCTTTGTTAATCAATTGATTCTTCTCTTTGGTTGTTTTGTCTTCTCTAATCTTTCTTCTCAATGTTGGTTTCTACATTTGATTGATTGATTATTTAGTTTGATTAGATTTCTCACTTTAGTGGCTTTTTTTTGGATTGATTCTCACAACATCGATTCTTCTGCTTGATATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATTTGTTCTTCTATTTTGGTTGCATATATTTAATTAGTTTGGTTTTGATCTTCTATCTGTTAGTTCTCTCTCATTGATCATTGCTTTTGTCTTTGTTGATTCTTCCCATTTGGCTGATGCTTCTCTCTATGGCTGATGGTATAAGTGCTTCTCTAGTTGGTTACACTATTAGTTTGTTTAGTTAATTTTTAGGGTTAATTTTGTAATAAGCTCAAAGCTTTGGCTTGAGTGGTAGTATATTTTAAGTTTATATGATTGAGTATGTTCTTTATTTTTTGTTTGACAAACTCTCGATGCTATTTGTTGTTGCATCGTGAGTTTGAAGGGAGATGTTAGATAATAAGACTATACTTATTATTGACTCATTTATGTTTCTAAGTTAGTAATGTCCATTCACTTTTATATATATTCTCTTATAACCTTTTGATATATTATGCCATTTGATATTATTGGAACTCTATTAGCCTTCTTTATGTGATCACCTAAGGTTAGACATATTTCACCTCTTACAAAATTTCTCTATTTGTTAGAGAGGTATGTGATTAGATATTAATTTTTCCACCACTCTAATATGTGAAACTTTCCTAAGTGCCAAGATTTATTTGTTATCTAACTGAATGTTACTCCGATGTTGAATATAACAAACAAAACATTCACATTTGGTGGTGCTTAATAGAAGTAAATCTTAACTAACTTCTCACCATCAACTGGTTTACAATAATTTTTTTATTTACACCCTTAAATTAATTTAGATTTTTGTGTACAATAATTTTTTTATTTGCATGCAAAAAGTTTCAATAAAAAGTAGTTTAAAAAATAAAACTATTTTTTTATCAATATCAAGAAAGTTGAATGAAATTAACTATCATTTTTAGATTAACTTGAATTTATATGATTTGACTTATATTCAAGACCAAAGAAGGTATCTCTTTAGGGTTCGTTTGGTGGTTAACATAAAATAGAGAGAATAAGACAAGAAACTCAATGGATGAGATGGGATATGAACAACATAAATGCTTATTCTATTATGTATTTGAGCATTCATGATAACAGTTATATATTTTTTCCAAAATAATTTTTGATATTTTTCCTAAAATTTAATGAAATATTAATTTTATATAATTTAAAGTAATTCATTGACACTACCAAATAAACAATTTCAAATTTGAAAAAAAAAACATAGGGGTAACAAACAGTTCTATTATAAAAGTCAGATAAGCAAAATAAAGTTATGGTATAATAATTAATTTTAAATGACAACACTACCTTTGTAAGAGAATTCTATTTAACTTCTTAAAAGAAAAAGTAAATTAGTTATCTTATGTTATTTATGTAATTTTTGAAAGTTCTAATACATATGGATAAAGTTAAAATTATAAGGTGTTTTCACTTTCCTTCAAAAAAAAAAAGTGTTTTCACTTATTAATATTTTAAATTATTAGGAGAGTTGATTTATTTTAAATATATGATGATCAAATGATTTATAAAGTGCAGATGGACCGTGATTGCTTCAAATTTACCGGGGAGAACCGATAATGAGGTAAAGAATCACTGGCACACTACCTTGAAGAAGCGTTTTATAAAGAATATTAAGTCTAAGCGTGGAAGGAGAAAAGCCAAAGATTCAAATTCAAATAATCACCCTATATTGGAAGAAGCCAATAAATTTGAAGGAGTTTTAGAGAACAACAATGATCCTAATATTGCAAATCAAATATCTTCACAACCAGCTTCAAGCGATTTGTCATGCATAACAATGGAAACTGCAATTTTTGATGATAGTGACCTTTCTTTTATGGAAACATACATGGACAATTTTAGTGAGAATTTTTGGACAGAGCCATATATGATAGACAATTCATATGTCCCCTATAATCACCCTACAATGGAAGAAACCAAGAAACTTGACGGAGTTTTTGAGAACAACATCGATGCCAATATTACGAGTTCACTATCTTCGCAACCATCTTCAAGCGGATTCTCTTGCATAACAACAGAAAATTTAGCTTCCACTATATCACATGAAAATTCAGTTTTTGATGGCAATGACCTTCCTTTTATGGATGCATTATTCATGGAGACTGTGAGTGAAAATTTTATGACTGAGCCATATATGATAGACACTTTCTATGCCAATAAACTTGAAGGAGTTTTAGAGAACAGTGATCCTAATATTGCAAGTCGATTGTCTTCACAACCATCTTCAAGTGCATTCTCTTGCATAGCAATGGATACTGCATCTACCACAATATCATATGAGAATCCAATTCTTGATGACAATGACCTTCATTTTATGGATGCATTCATAGAGGATTTGAGTGAGAATTTCTGGTCAGAGCCTTATATGATAGACAGTTCACATGTCCTCCATAATCACCTTACAATGGAAAATGTTACTTCCACAACATCACATGAAAATTTTGTTCTTGATGAAAATGACCTTCCTTTAATGGATGCATTATTCATGGAGACTGAGTGA
Protein sequence

>MS.gene043336.t1

MVRTPCDNNGLRKGTWTHEEDKKLIAYVTRYGCWNWRQLPKFAGLERCGKSCRLRWMNYLRPNIKRGNFNQQEEDVIIKLHEKLGNRWTVIASNLPGRTDNEVKNHWHTTLKKRFIKNIKSKRGRRKAKDSNSNNHPILEEANKFEGVLENNNDPNIANQISSQPASSDLSCITMETAIFDDSDLSFMETYMDNFSENFWTEPYMIDNSYVPYNHPTMEETKKLDGVFENNIDANITSSLSSQPSSSGFSCITTENLASTISHENSVFDGNDLPFMDALFMETVSENFMTEPYMIDTFYANKLEGVLENSDPNIASRLSSQPSSSAFSCIAMDTASTTISYENPILDDNDLHFMDAFIEDLSENFWSEPYMIDSSHVLHNHLTMENVTSTTSHENFVLDENDLPLMDALFMETE