AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene043344

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene043344.t1 MTR_2g089620 96.466 283 10 0 10 292 44 326 0.0 563
MS.gene043344.t1 MTR_4g091490 45.000 320 133 12 10 292 45 358 7.51e-66 210
MS.gene043344.t1 MTR_4g478180 70.874 103 30 0 9 111 44 146 6.37e-50 169
MS.gene043344.t1 MTR_5g029840 56.287 167 54 3 2 168 36 183 1.95e-49 167
MS.gene043344.t1 MTR_4g082290 78.652 89 19 0 10 98 44 132 3.55e-48 166
MS.gene043344.t1 MTR_4g082230 77.528 89 20 0 10 98 44 132 3.74e-47 163
MS.gene043344.t1 MTR_5g007370 71.134 97 28 0 9 105 43 139 4.19e-47 160
MS.gene043344.t1 MTR_6g012690 73.404 94 25 0 10 103 44 137 1.16e-46 160
MS.gene043344.t1 MTR_3g074520 74.157 89 23 0 9 97 43 131 1.86e-46 159
MS.gene043344.t1 MTR_7g011170 73.626 91 24 0 10 100 44 134 2.12e-46 158
MS.gene043344.t1 MTR_7g076740 75.581 86 21 0 9 94 44 129 1.24e-43 151
MS.gene043344.t1 MTR_4g073420 77.647 85 19 0 10 94 44 128 2.19e-43 150
MS.gene043344.t1 MTR_8g031360 66.667 99 32 1 9 106 45 143 4.96e-42 147
MS.gene043344.t1 MTR_4g102380 69.767 86 26 0 9 94 43 128 3.83e-41 144
MS.gene043344.t1 MTR_1g112760 67.442 86 28 0 9 94 44 129 3.91e-41 142
MS.gene043344.t1 MTR_3g077110 64.835 91 32 0 9 99 43 133 5.51e-41 145
MS.gene043344.t1 MTR_7g110830 75.294 85 21 0 10 94 44 128 7.58e-41 145
MS.gene043344.t1 MTR_4g105130 71.765 85 24 0 10 94 44 128 1.14e-40 145
MS.gene043344.t1 MTR_1g085640 74.118 85 22 0 10 94 44 128 1.24e-40 145
MS.gene043344.t1 MTR_8g095390 71.765 85 24 0 10 94 44 128 1.35e-40 143
MS.gene043344.t1 MTR_3g461490 68.132 91 28 1 10 100 44 133 3.91e-40 142
MS.gene043344.t1 MTR_1g085040 73.256 86 23 0 9 94 43 128 4.24e-40 143
MS.gene043344.t1 MTR_5g079670 69.880 83 25 0 10 92 43 125 6.38e-40 139
MS.gene043344.t1 MTR_3g097450 73.494 83 22 0 10 92 44 126 7.84e-40 141
MS.gene043344.t1 MTR_5g042030 72.619 84 23 0 12 95 41 124 1.22e-39 140
MS.gene043344.t1 MTR_7g115650 74.359 78 20 0 10 87 44 121 1.64e-39 137
MS.gene043344.t1 MTR_5g078140 69.767 86 26 0 9 94 43 128 2.22e-39 140
MS.gene043344.t1 MTR_6g009430 61.616 99 38 0 10 108 44 142 8.24e-39 139
MS.gene043344.t1 MTR_3g065440 71.429 84 24 0 9 92 43 126 9.01e-39 138
MS.gene043344.t1 MTR_4g485530 68.675 83 26 0 10 92 44 126 2.62e-38 134
MS.gene043344.t1 MTR_2g064160 66.667 84 28 0 9 92 42 125 5.38e-38 136
MS.gene043344.t1 MTR_3g083540 67.059 85 28 0 10 94 73 157 5.88e-38 136
MS.gene043344.t1 MTR_4g065017 64.583 96 27 1 10 98 49 144 3.47e-37 135
MS.gene043344.t1 MTR_7g111290 70.930 86 25 0 9 94 1 86 3.70e-37 135
MS.gene043344.t1 MTR_1g076150 71.605 81 23 0 2 82 36 116 5.33e-37 132
MS.gene043344.t1 MTR_1g043080 76.712 73 17 0 11 83 45 117 1.66e-36 131
MS.gene043344.t1 MTR_1g100653 75.000 76 19 0 10 85 44 119 3.26e-36 131
MS.gene043344.t1 MTR_7g111290 70.930 86 25 0 9 94 43 128 3.34e-36 133
MS.gene043344.t1 MTR_2g097910 76.712 73 17 0 10 82 52 124 1.58e-35 130
MS.gene043344.t1 MTR_7g096930 75.342 73 18 0 10 82 44 116 1.84e-35 129
MS.gene043344.t1 MTR_8g017340 63.736 91 32 1 9 99 44 133 1.90e-35 133
MS.gene043344.t1 MTR_1g043050 75.676 74 18 0 10 83 44 117 2.46e-35 128
MS.gene043344.t1 MTR_3g028740 76.712 73 17 0 10 82 54 126 3.11e-35 130
MS.gene043344.t1 MTR_2g089450 72.368 76 21 0 9 84 43 118 5.20e-35 127
MS.gene043344.t1 MTR_8g017350 62.637 91 33 1 9 99 44 133 1.19e-34 132
MS.gene043344.t1 MTR_8g027345 73.333 75 20 0 10 84 44 118 3.06e-34 126
MS.gene043344.t1 MTR_8g098860 40.884 181 94 3 10 179 44 222 3.90e-34 126
MS.gene043344.t1 MTR_8g017440 54.369 103 41 1 9 105 43 145 7.83e-34 126
MS.gene043344.t1 MTR_7g117730 72.603 73 20 0 10 82 44 116 1.00e-33 124
MS.gene043344.t1 MTR_2g099740 58.511 94 32 1 9 95 43 136 1.75e-33 126
MS.gene043344.t1 MTR_0251s0050 50.833 120 55 1 9 128 44 159 2.92e-33 123
MS.gene043344.t1 MTR_2g067420 77.941 68 15 0 10 77 46 113 3.15e-33 124
MS.gene043344.t1 MTR_1g100667 66.667 78 26 0 8 85 43 120 3.31e-33 123
MS.gene043344.t1 MTR_6g055910 62.791 86 31 1 8 93 15 99 3.35e-33 122
MS.gene043344.t1 MTR_5g010020 63.107 103 33 2 11 108 45 147 3.71e-33 124
MS.gene043344.t1 MTR_4g125520 72.603 73 20 0 10 82 44 116 4.07e-33 123
MS.gene043344.t1 MTR_4g100720 73.611 72 19 0 10 81 45 116 4.26e-33 120
MS.gene043344.t1 MTR_8g017540 62.963 81 30 0 9 89 89 169 1.18e-32 124
MS.gene043344.t1 MTR_2g034790 69.863 73 22 0 10 82 44 116 2.15e-32 122
MS.gene043344.t1 MTR_0008s0390 68.000 75 24 0 9 83 44 118 4.57e-32 120
MS.gene043344.t1 MTR_8g017390 43.421 152 75 5 9 153 44 191 4.65e-32 124
MS.gene043344.t1 MTR_7g010210 68.421 76 24 0 10 85 44 119 4.92e-32 120
MS.gene043344.t1 MTR_7g010210 68.421 76 24 0 10 85 44 119 5.49e-32 121
MS.gene043344.t1 MTR_4g121460 68.493 73 23 0 10 82 44 116 5.93e-32 121
MS.gene043344.t1 MTR_1g017000 60.976 82 32 0 2 83 37 118 6.36e-32 119
MS.gene043344.t1 MTR_7g087130 63.953 86 29 1 10 93 44 129 7.47e-32 120
MS.gene043344.t1 MTR_3g039990 69.333 75 23 0 10 84 45 119 8.47e-32 120
MS.gene043344.t1 MTR_4g063100 61.250 80 30 1 3 81 2 81 8.59e-32 118
MS.gene043344.t1 MTR_0008s0470 66.667 75 25 0 9 83 44 118 1.55e-31 119
MS.gene043344.t1 MTR_6g055910 61.628 86 32 1 8 93 44 128 1.84e-31 118
MS.gene043344.t1 MTR_2g089420 64.474 76 27 0 9 84 42 117 2.25e-31 121
MS.gene043344.t1 MTR_8g020490 69.863 73 22 0 10 82 40 112 2.40e-31 117
MS.gene043344.t1 MTR_0197s0010 65.333 75 26 0 8 82 31 105 2.51e-31 117
MS.gene043344.t1 MTR_1g062940 52.885 104 49 0 5 108 33 136 4.79e-31 115
MS.gene043344.t1 MTR_3g052430 69.444 72 22 0 10 81 73 144 5.53e-31 121
MS.gene043344.t1 MTR_8g017500 55.435 92 35 1 9 94 43 134 6.44e-31 119
MS.gene043344.t1 MTR_3g052450 69.014 71 22 0 11 81 73 143 1.75e-30 120
MS.gene043344.t1 MTR_4g063100 64.384 73 26 0 9 81 38 110 1.92e-30 115
MS.gene043344.t1 MTR_0140s0030 65.753 73 25 0 10 82 45 117 2.20e-30 117
MS.gene043344.t1 MTR_0489s0020 65.753 73 25 0 10 82 45 117 2.20e-30 117
MS.gene043344.t1 MTR_8g042410 66.667 78 25 1 10 87 69 145 2.20e-30 120
MS.gene043344.t1 MTR_5g014990 62.195 82 31 0 2 83 37 118 1.02e-29 114
MS.gene043344.t1 MTR_1g045610 65.753 73 25 0 9 81 52 124 1.69e-29 112
MS.gene043344.t1 MTR_3g011610 62.821 78 28 1 10 87 69 145 2.36e-29 117
MS.gene043344.t1 MTR_1g021230 66.667 72 24 0 10 81 89 160 3.47e-29 115
MS.gene043344.t1 MTR_2g096380 58.025 81 34 0 1 81 10 90 3.51e-29 110
MS.gene043344.t1 MTR_0008s0280 63.889 72 26 0 9 80 43 114 3.82e-29 111
MS.gene043344.t1 MTR_3g045430 46.667 105 56 0 1 105 36 140 6.39e-29 112
MS.gene043344.t1 MTR_6g012180 72.059 68 19 0 10 77 44 111 8.20e-29 112
MS.gene043344.t1 MTR_0063s0090 64.789 71 25 0 9 79 43 113 8.78e-29 110
MS.gene043344.t1 MTR_4g057635 56.383 94 40 1 2 95 37 129 9.04e-29 112
MS.gene043344.t1 MTR_1g017140 60.976 82 32 0 2 83 37 118 1.17e-28 112
MS.gene043344.t1 MTR_1g073170 63.014 73 27 0 9 81 51 123 1.31e-28 110
MS.gene043344.t1 MTR_7g035075 64.384 73 26 0 10 82 46 118 2.01e-28 108
MS.gene043344.t1 MTR_5g079120 59.494 79 32 0 10 88 93 171 3.47e-28 110
MS.gene043344.t1 MTR_2g096380 61.644 73 28 0 9 81 37 109 5.42e-28 108
MS.gene043344.t1 MTR_5g079290 60.811 74 29 0 10 83 49 122 6.33e-28 108
MS.gene043344.t1 MTR_3g103570 58.537 82 34 0 2 83 37 118 9.51e-28 110
MS.gene043344.t1 MTR_6g090405 57.317 82 35 0 2 83 37 118 1.12e-27 108
MS.gene043344.t1 MTR_5g078910 60.811 74 29 0 10 83 39 112 1.35e-27 108
MS.gene043344.t1 MTR_5g079220 62.162 74 28 0 10 83 53 126 1.75e-27 108
MS.gene043344.t1 MTR_1g110460 59.494 79 32 0 10 88 58 136 2.90e-27 108
MS.gene043344.t1 MTR_6g006030 61.644 73 28 0 10 82 46 118 3.62e-27 105
MS.gene043344.t1 MTR_0247s0040 65.714 70 24 0 10 79 39 108 4.02e-27 104
MS.gene043344.t1 MTR_7g017260 60.811 74 29 0 10 83 59 132 4.14e-27 107
MS.gene043344.t1 MTR_7g102110 54.878 82 37 0 2 83 37 118 7.88e-27 106
MS.gene043344.t1 MTR_8g060940 65.217 69 24 0 10 78 39 107 9.08e-27 105
MS.gene043344.t1 MTR_2g095520 68.657 67 21 0 10 76 45 111 9.74e-27 107
MS.gene043344.t1 MTR_5g078860 62.162 74 28 0 10 83 39 112 1.89e-26 105
MS.gene043344.t1 MTR_5g078800 60.811 74 29 0 10 83 39 112 2.18e-26 104
MS.gene043344.t1 MTR_0193s0090 60.811 74 29 0 10 83 39 112 2.32e-26 103
MS.gene043344.t1 MTR_1g086530 61.111 72 28 0 10 81 65 136 2.63e-26 105
MS.gene043344.t1 MTR_1g086510 62.500 72 27 0 10 81 53 124 3.14e-26 104
MS.gene043344.t1 MTR_0001s0360 59.722 72 29 0 12 83 41 112 1.20e-25 102
MS.gene043344.t1 MTR_2g088170 64.103 78 27 1 10 87 61 137 1.30e-25 105
MS.gene043344.t1 MTR_4g097570 67.164 67 22 0 9 75 45 111 1.38e-25 103
MS.gene043344.t1 MTR_4g128670 62.667 75 28 0 2 76 37 111 1.55e-25 104
MS.gene043344.t1 MTR_4g097570 62.162 74 28 0 2 75 37 110 3.62e-25 102
MS.gene043344.t1 MTR_1g083630 61.111 72 28 0 10 81 44 115 6.49e-25 104
MS.gene043344.t1 MTR_5g078950 61.429 70 27 0 10 79 39 108 1.46e-24 100
MS.gene043344.t1 MTR_7g109320 65.753 73 25 0 10 82 44 116 1.78e-24 101
MS.gene043344.t1 MTR_5g078930 59.722 72 29 0 10 81 41 112 2.37e-24 98.2
MS.gene043344.t1 MTR_5g062790 52.809 89 40 2 10 97 41 128 2.96e-24 100
MS.gene043344.t1 MTR_5g088080 50.000 90 43 2 10 98 44 132 1.49e-23 97.4
MS.gene043344.t1 MTR_5g088150 50.000 90 43 2 10 98 44 132 1.49e-23 97.4
MS.gene043344.t1 MTR_5g488210 50.000 90 43 2 10 98 44 132 1.49e-23 97.4
MS.gene043344.t1 MTR_5g088640 50.000 90 43 2 10 98 44 132 1.62e-23 97.4
MS.gene043344.t1 MTR_4g128190 47.959 98 48 2 10 106 30 125 2.06e-23 96.3
MS.gene043344.t1 MTR_5g488170 48.421 95 47 2 10 103 44 137 2.12e-23 96.3
MS.gene043344.t1 MTR_2g033170 64.789 71 25 0 10 80 56 126 3.74e-23 97.4
MS.gene043344.t1 MTR_4g019370 55.696 79 31 1 14 92 71 145 1.72e-22 95.9
MS.gene043344.t1 MTR_8g006470 58.108 74 29 2 12 84 44 116 1.76e-22 94.7
MS.gene043344.t1 MTR_5g088610 51.685 89 41 2 10 97 41 128 8.38e-22 94.0
MS.gene043344.t1 MTR_4g123040 62.857 70 26 0 11 80 57 126 2.04e-21 92.4
MS.gene043344.t1 MTR_3g463400 54.412 68 31 0 14 81 166 233 5.51e-21 92.8
MS.gene043344.t1 MTR_4g105660 55.882 68 30 0 14 81 213 280 9.66e-21 91.7
MS.gene043344.t1 MTR_4g029540 53.571 84 35 3 12 94 44 124 1.28e-20 89.7
MS.gene043344.t1 MTR_7g451170 52.941 68 32 0 14 81 224 291 1.93e-20 90.9
MS.gene043344.t1 MTR_7g061330 53.623 69 32 0 14 82 146 214 3.45e-20 90.9
MS.gene043344.t1 MTR_7g461410 53.623 69 32 0 14 82 146 214 3.45e-20 90.9
MS.gene043344.t1 MTR_5g049190 56.716 67 29 0 14 80 52 118 4.99e-20 87.0
MS.gene043344.t1 MTR_7g061330 53.623 69 32 0 14 82 110 178 5.05e-20 90.1
MS.gene043344.t1 MTR_5g070020 51.471 68 33 0 14 81 155 222 5.08e-20 89.0
MS.gene043344.t1 MTR_7g037260 52.941 68 32 0 14 81 178 245 8.72e-20 88.6
MS.gene043344.t1 MTR_1g057980 56.061 66 29 0 14 79 113 178 1.21e-19 87.0
MS.gene043344.t1 MTR_3g077650 54.412 68 31 0 14 81 214 281 1.31e-19 88.6
MS.gene043344.t1 MTR_4g088015 52.239 67 32 0 14 80 254 320 1.58e-19 88.6
MS.gene043344.t1 MTR_5g007300 84.444 45 7 0 10 54 96 140 1.83e-19 83.2
MS.gene043344.t1 MTR_6g027340 37.908 153 81 4 7 155 41 183 2.00e-19 84.7
MS.gene043344.t1 MTR_5g016510 35.246 122 79 0 14 135 38 159 2.04e-19 86.7
MS.gene043344.t1 MTR_6g027360 31.132 212 117 5 7 216 103 287 2.81e-19 86.3
MS.gene043344.t1 MTR_7g035350 56.061 66 29 0 14 79 258 323 3.08e-19 87.4
MS.gene043344.t1 MTR_3g101290 52.941 68 32 0 14 81 70 137 3.61e-19 84.3
MS.gene043344.t1 MTR_4g082040 54.412 68 31 0 14 81 138 205 7.22e-19 86.3
MS.gene043344.t1 MTR_6g015455 52.941 68 32 0 14 81 38 105 8.29e-19 87.0
MS.gene043344.t1 MTR_5g041570 52.941 68 32 0 14 81 167 234 1.68e-18 85.5
MS.gene043344.t1 MTR_6g074860 48.235 85 42 2 14 98 37 119 2.39e-18 82.4
MS.gene043344.t1 MTR_4g094982 52.941 68 32 0 14 81 38 105 2.82e-18 82.8
MS.gene043344.t1 MTR_7g450950 51.515 66 32 0 14 79 190 255 3.71e-18 83.6
MS.gene043344.t1 MTR_1g026870 48.052 77 37 1 14 87 118 194 4.88e-18 84.7
MS.gene043344.t1 MTR_3g110028 46.753 77 38 1 14 87 118 194 5.69e-18 84.3
MS.gene043344.t1 MTR_5g082910 53.846 65 30 0 14 78 52 116 5.19e-17 79.7
MS.gene043344.t1 MTR_6g027370 46.988 83 43 1 14 96 132 213 5.89e-17 80.5
MS.gene043344.t1 MTR_7g037130 45.833 72 37 1 14 85 178 247 1.09e-15 76.6
MS.gene043344.t1 MTR_1g085880 58.333 72 29 1 10 80 44 115 1.21e-15 73.9
MS.gene043344.t1 MTR_6g055910 55.172 58 25 1 36 93 2 58 2.18e-15 73.9
MS.gene043344.t1 MTR_7g086960 52.941 68 32 0 14 81 122 189 3.10e-15 75.5
MS.gene043344.t1 MTR_1g085770 58.333 72 29 1 10 80 44 115 3.12e-15 74.7
MS.gene043344.t1 MTR_7g061550 34.906 106 62 2 2 101 31 135 4.28e-15 75.1
MS.gene043344.t1 MTR_5g010650 53.226 62 29 0 14 75 143 204 5.60e-15 75.1
MS.gene043344.t1 MTR_3g089045 50.000 76 37 1 7 81 41 116 3.31e-14 71.6
MS.gene043344.t1 MTR_4g063100 65.116 43 15 0 39 81 4 46 4.07e-14 69.7
MS.gene043344.t1 MTR_2g096380 64.286 42 15 0 40 81 5 46 4.80e-13 66.2
MS.gene043344.t1 MTR_5g007310 52.632 57 24 2 61 117 3 56 3.06e-12 65.1
MS.gene043344.t1 MTR_5g038910 39.706 68 41 0 14 81 59 126 3.21e-11 63.9
MS.gene043344.t1 MTR_1g076150 70.588 34 10 0 49 82 31 64 5.57e-11 61.2
MS.gene043344.t1 MTR_5g038910 39.706 68 41 0 14 81 59 126 5.74e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene043344.t1 AT4G21440 43.505 331 114 13 10 292 44 349 5.03e-66 210
MS.gene043344.t1 AT4G05100 44.746 295 131 7 11 292 46 321 1.96e-60 195
MS.gene043344.t1 AT4G28110 58.192 177 55 3 10 179 44 208 4.89e-56 182
MS.gene043344.t1 AT5G54230 58.642 162 57 6 10 170 44 196 3.89e-51 171
MS.gene043344.t1 AT5G16770 72.549 102 28 0 10 111 44 145 3.75e-49 166
MS.gene043344.t1 AT5G16770 72.549 102 28 0 10 111 44 145 3.75e-49 166
MS.gene043344.t1 AT3G02940 80.000 90 18 0 10 99 44 133 5.07e-49 165
MS.gene043344.t1 AT5G16770 72.549 102 28 0 10 111 44 145 6.05e-49 166
MS.gene043344.t1 AT5G16770 72.549 102 28 0 10 111 44 145 6.05e-49 166
MS.gene043344.t1 AT3G02940 80.000 90 18 0 10 99 44 133 9.76e-49 165
MS.gene043344.t1 AT3G02940 80.000 90 18 0 10 99 44 133 9.76e-49 165
MS.gene043344.t1 AT5G65230 70.833 96 28 0 5 100 39 134 1.26e-47 161
MS.gene043344.t1 AT5G10280 65.455 110 38 0 5 114 39 148 4.45e-47 160
MS.gene043344.t1 AT1G34670 54.967 151 64 3 5 153 39 187 4.20e-46 159
MS.gene043344.t1 AT5G15310 75.581 86 21 0 10 95 44 129 4.73e-46 155
MS.gene043344.t1 AT5G15310 75.581 86 21 0 10 95 44 129 1.34e-45 157
MS.gene043344.t1 AT5G15310 75.581 86 21 0 10 95 44 129 1.48e-45 156
MS.gene043344.t1 AT4G17785 61.607 112 43 0 2 113 37 148 4.82e-45 156
MS.gene043344.t1 AT3G01140 44.920 187 84 2 10 189 44 218 4.96e-45 155
MS.gene043344.t1 AT4G17785 61.607 112 43 0 2 113 37 148 5.21e-45 155
MS.gene043344.t1 AT3G01140 45.989 187 82 3 10 189 87 261 1.49e-44 155
MS.gene043344.t1 AT4G34990 76.471 85 20 0 10 94 44 128 1.89e-44 152
MS.gene043344.t1 AT5G07700 74.118 85 22 0 10 94 44 128 6.82e-43 150
MS.gene043344.t1 AT5G07700 74.118 85 22 0 10 94 44 128 6.82e-43 150
MS.gene043344.t1 AT1G18570 78.313 83 18 0 10 92 45 127 9.15e-43 150
MS.gene043344.t1 AT3G61250 71.910 89 25 0 6 94 40 128 9.86e-43 149
MS.gene043344.t1 AT4G22680 73.256 86 23 0 9 94 43 128 1.28e-42 147
MS.gene043344.t1 AT2G16720 77.108 83 19 0 10 92 44 126 2.03e-42 147
MS.gene043344.t1 AT4G38620 75.294 85 21 0 10 94 44 128 2.15e-42 147
MS.gene043344.t1 AT1G22640 60.526 114 43 1 10 121 44 157 2.93e-42 146
MS.gene043344.t1 AT1G57560 70.930 86 25 0 9 94 43 128 4.99e-42 146
MS.gene043344.t1 AT1G57560 70.930 86 25 0 9 94 43 128 6.01e-42 147
MS.gene043344.t1 AT5G26660 62.745 102 36 1 11 112 14 113 8.75e-42 147
MS.gene043344.t1 AT5G61420 74.118 85 22 0 10 94 44 128 9.38e-42 147
MS.gene043344.t1 AT5G07690 72.941 85 23 0 10 94 44 128 1.77e-41 146
MS.gene043344.t1 AT5G26660 61.538 104 38 1 9 112 43 144 2.71e-41 146
MS.gene043344.t1 AT4G12350 72.093 86 24 0 9 94 43 128 3.18e-41 144
MS.gene043344.t1 AT1G74080 71.591 88 25 0 10 97 44 131 3.93e-41 145
MS.gene043344.t1 AT4G09460 74.699 83 21 0 10 92 44 126 5.49e-41 142
MS.gene043344.t1 AT3G13540 58.407 113 41 2 10 121 55 162 1.77e-40 141
MS.gene043344.t1 AT5G60890 71.429 84 24 0 11 94 45 128 1.79e-40 142
MS.gene043344.t1 AT5G62320 48.966 145 57 3 9 153 51 178 2.44e-40 140
MS.gene043344.t1 AT5G56110 69.231 91 27 1 10 100 44 133 6.14e-40 142
MS.gene043344.t1 AT1G09540 72.093 86 24 0 9 94 43 128 6.29e-40 143
MS.gene043344.t1 AT1G66230 70.930 86 25 0 9 94 43 128 7.52e-40 140
MS.gene043344.t1 AT1G35515 72.289 83 23 0 10 92 44 126 9.76e-40 138
MS.gene043344.t1 AT1G18710 64.444 90 32 0 10 99 44 133 2.15e-39 139
MS.gene043344.t1 AT5G16600 68.605 86 27 0 9 94 43 128 7.25e-39 139
MS.gene043344.t1 AT4G01680 73.494 83 22 0 10 92 44 126 1.24e-38 136
MS.gene043344.t1 AT4G01680 70.115 87 26 0 6 92 52 138 1.32e-38 139
MS.gene043344.t1 AT1G74430 65.882 85 29 0 10 94 44 128 3.83e-38 135
MS.gene043344.t1 AT4G01680 73.494 83 22 0 10 92 44 126 4.64e-38 137
MS.gene043344.t1 AT3G12720 66.667 84 28 0 9 92 53 136 1.18e-37 135
MS.gene043344.t1 AT3G23250 75.342 73 18 0 10 82 44 116 4.80e-36 130
MS.gene043344.t1 AT5G12870 74.667 75 19 0 10 84 50 124 1.03e-35 130
MS.gene043344.t1 AT1G06180 69.048 84 26 0 2 85 36 119 1.26e-35 129
MS.gene043344.t1 AT5G14340 60.000 95 35 1 3 94 46 140 1.27e-35 129
MS.gene043344.t1 AT1G16490 73.973 73 19 0 10 82 46 118 3.75e-35 128
MS.gene043344.t1 AT2G31180 75.342 73 18 0 10 82 44 116 8.74e-35 126
MS.gene043344.t1 AT5G35550 70.000 80 24 0 3 82 42 121 1.86e-34 126
MS.gene043344.t1 AT3G28470 52.419 124 58 1 11 134 45 167 1.96e-34 127
MS.gene043344.t1 AT1G63910 64.368 87 31 0 10 96 44 130 2.37e-34 128
MS.gene043344.t1 AT1G79180 72.368 76 21 0 10 85 46 121 3.09e-34 126
MS.gene043344.t1 AT1G56160 69.136 81 25 0 2 82 38 118 6.65e-34 125
MS.gene043344.t1 AT1G79180 73.333 75 20 0 11 85 80 154 7.93e-34 126
MS.gene043344.t1 AT5G14750 68.493 73 23 0 10 82 48 120 1.28e-33 122
MS.gene043344.t1 AT5G35550 73.973 73 19 0 10 82 46 118 3.70e-33 122
MS.gene043344.t1 AT3G12820 65.060 83 29 0 2 84 38 120 3.96e-33 122
MS.gene043344.t1 AT3G13890 68.919 74 23 0 10 83 44 117 5.98e-33 124
MS.gene043344.t1 AT3G08500 72.603 73 20 0 10 82 62 134 8.31e-33 124
MS.gene043344.t1 AT5G40330 67.123 73 24 0 10 82 44 116 1.54e-32 120
MS.gene043344.t1 AT5G55020 70.513 78 22 1 10 87 58 134 2.20e-32 125
MS.gene043344.t1 AT3G27920 64.865 74 26 0 10 83 46 119 3.25e-32 119
MS.gene043344.t1 AT3G12820 70.423 71 21 0 14 84 2 72 4.44e-32 117
MS.gene043344.t1 AT3G13890 69.444 72 22 0 12 83 55 126 5.93e-32 122
MS.gene043344.t1 AT5G14750 68.116 69 22 0 14 82 18 86 9.99e-32 116
MS.gene043344.t1 AT5G62470 66.667 75 25 0 10 84 44 118 1.01e-31 120
MS.gene043344.t1 AT1G22640 56.566 99 41 1 25 121 2 100 1.32e-31 117
MS.gene043344.t1 AT3G53200 67.089 79 26 0 3 81 1 79 1.44e-31 117
MS.gene043344.t1 AT3G53200 69.737 76 23 0 6 81 37 112 1.49e-31 117
MS.gene043344.t1 AT4G25560 67.949 78 25 0 8 85 40 117 1.52e-31 119
MS.gene043344.t1 AT3G47600 66.667 75 25 0 10 84 44 118 2.89e-31 119
MS.gene043344.t1 AT1G08810 67.089 79 26 0 10 88 44 122 3.61e-31 117
MS.gene043344.t1 AT1G74650 68.919 74 23 0 10 83 44 117 3.85e-31 119
MS.gene043344.t1 AT5G52260 71.795 78 22 0 8 85 42 119 4.18e-31 117
MS.gene043344.t1 AT2G47460 68.493 73 23 0 10 82 44 116 4.62e-31 119
MS.gene043344.t1 AT3G62610 68.493 73 23 0 10 82 44 116 5.99e-31 119
MS.gene043344.t1 AT5G52600 68.056 72 23 0 10 81 44 115 6.26e-31 115
MS.gene043344.t1 AT3G47600 66.216 74 25 0 11 84 39 112 7.14e-31 118
MS.gene043344.t1 AT4G26930 67.949 78 24 1 10 87 51 127 1.03e-30 119
MS.gene043344.t1 AT5G40350 61.842 76 29 0 11 86 5 80 1.26e-30 113
MS.gene043344.t1 AT2G26960 52.830 106 48 2 10 115 52 155 1.28e-30 119
MS.gene043344.t1 AT3G28910 68.493 73 23 0 10 82 44 116 1.89e-30 117
MS.gene043344.t1 AT5G49330 67.123 73 24 0 10 82 44 116 2.66e-30 117
MS.gene043344.t1 AT5G23000 62.195 82 31 0 2 83 37 118 4.17e-30 116
MS.gene043344.t1 AT5G40350 61.842 76 29 0 11 86 50 125 4.34e-30 113
MS.gene043344.t1 AT5G62470 66.667 75 24 1 10 84 44 117 5.87e-30 116
MS.gene043344.t1 AT5G06100 64.103 78 27 1 10 87 64 140 6.76e-30 117
MS.gene043344.t1 AT3G11440 62.821 78 28 1 10 87 73 149 8.71e-30 117
MS.gene043344.t1 AT5G57620 62.195 82 31 0 2 83 37 118 1.33e-29 115
MS.gene043344.t1 AT5G06100 64.103 78 27 1 10 87 64 140 1.37e-29 117
MS.gene043344.t1 AT5G06100 64.103 78 27 1 10 87 64 140 1.37e-29 117
MS.gene043344.t1 AT5G06100 64.103 78 27 1 10 87 64 140 1.37e-29 117
MS.gene043344.t1 AT5G06100 64.103 78 27 1 10 87 64 140 1.37e-29 117
MS.gene043344.t1 AT3G49690 62.195 82 31 0 2 83 37 118 1.64e-29 114
MS.gene043344.t1 AT3G01530 59.036 83 34 0 10 92 57 139 1.65e-29 111
MS.gene043344.t1 AT2G32460 60.241 83 32 1 10 92 38 119 1.92e-29 116
MS.gene043344.t1 AT3G11440 62.821 78 28 1 10 87 73 149 2.04e-29 117
MS.gene043344.t1 AT3G11440 62.821 78 28 1 10 87 73 149 2.04e-29 117
MS.gene043344.t1 AT3G11440 62.821 78 28 1 10 87 73 149 2.04e-29 117
MS.gene043344.t1 AT2G32460 60.241 83 32 1 10 92 50 131 2.11e-29 116
MS.gene043344.t1 AT5G59780 62.667 75 28 0 7 81 16 90 3.64e-29 110
MS.gene043344.t1 AT5G65790 62.195 82 31 0 2 83 37 118 3.88e-29 114
MS.gene043344.t1 AT5G59780 61.644 73 28 0 9 81 39 111 8.43e-29 110
MS.gene043344.t1 AT3G27810 59.740 77 31 0 11 87 4 80 9.51e-29 108
MS.gene043344.t1 AT3G46130 61.644 73 28 0 9 81 40 112 1.78e-28 110
MS.gene043344.t1 AT1G48000 54.839 93 40 1 10 100 64 156 2.11e-28 109
MS.gene043344.t1 AT4G13480 64.384 73 26 0 9 81 37 109 2.54e-28 110
MS.gene043344.t1 AT3G46130 62.500 72 27 0 10 81 9 80 2.87e-28 108
MS.gene043344.t1 AT3G24310 64.384 73 26 0 9 81 49 121 2.98e-28 110
MS.gene043344.t1 AT3G30210 67.606 71 23 0 10 80 59 129 3.10e-28 110
MS.gene043344.t1 AT2G47190 63.889 72 26 0 10 81 52 123 3.86e-28 109
MS.gene043344.t1 AT3G46130 61.333 75 29 0 7 81 16 90 3.98e-28 108
MS.gene043344.t1 AT3G27810 59.740 77 31 0 11 87 53 129 4.06e-28 108
MS.gene043344.t1 AT1G66370 62.500 72 27 0 10 81 40 111 4.49e-28 108
MS.gene043344.t1 AT2G36890 53.846 91 42 0 2 92 37 127 8.19e-28 109
MS.gene043344.t1 AT4G37780 61.644 73 28 0 11 83 46 118 1.22e-27 108
MS.gene043344.t1 AT2G36890 53.846 91 42 0 2 92 78 168 1.51e-27 109
MS.gene043344.t1 AT1G25340 56.627 83 36 0 10 92 50 132 1.59e-27 108
MS.gene043344.t1 AT3G48920 63.380 71 26 0 10 80 50 120 1.48e-26 105
MS.gene043344.t1 AT3G23250 74.138 58 15 0 25 82 2 59 1.57e-26 104
MS.gene043344.t1 AT1G71030 48.958 96 46 2 3 98 6 98 1.89e-26 103
MS.gene043344.t1 AT1G71030 52.439 82 37 1 17 98 5 84 2.77e-26 102
MS.gene043344.t1 AT1G68320 62.500 72 27 0 10 81 51 122 3.27e-26 104
MS.gene043344.t1 AT1G66380 63.014 73 27 0 9 81 6 78 8.96e-26 98.6
MS.gene043344.t1 AT1G66380 63.889 72 26 0 10 81 40 111 5.81e-25 97.8
MS.gene043344.t1 AT1G56650 51.546 97 39 1 8 96 38 134 7.00e-25 100
MS.gene043344.t1 AT1G25340 57.143 77 33 0 16 92 51 127 8.59e-25 100
MS.gene043344.t1 AT1G25340 57.143 77 33 0 16 92 51 127 1.51e-24 100
MS.gene043344.t1 AT1G66390 63.889 72 26 0 10 81 40 111 3.54e-24 98.6
MS.gene043344.t1 AT2G26950 56.410 78 33 1 10 87 48 124 5.52e-24 100
MS.gene043344.t1 AT3G06490 64.000 75 27 0 6 80 47 121 6.92e-24 99.4
MS.gene043344.t1 AT3G60460 59.459 74 28 2 12 84 45 117 9.50e-23 95.9
MS.gene043344.t1 AT5G14750 63.793 58 21 0 25 82 2 59 1.08e-22 91.7
MS.gene043344.t1 AT5G14750 63.793 58 21 0 25 82 2 59 1.08e-22 91.7
MS.gene043344.t1 AT1G18960 47.619 84 42 1 11 94 40 121 1.39e-22 95.5
MS.gene043344.t1 AT4G28110 46.617 133 52 3 54 179 4 124 1.39e-22 93.2
MS.gene043344.t1 AT5G49620 45.714 105 55 1 12 114 60 164 2.97e-22 94.7
MS.gene043344.t1 AT2G39880 61.765 68 26 0 14 81 83 150 2.96e-21 92.8
MS.gene043344.t1 AT4G18770 44.340 106 54 3 14 118 250 351 1.35e-20 91.3
MS.gene043344.t1 AT3G09230 54.286 70 32 0 14 83 88 157 1.71e-20 90.9
MS.gene043344.t1 AT2G25230 50.633 79 37 1 14 90 59 137 3.60e-20 87.4
MS.gene043344.t1 AT5G40360 52.239 67 32 0 14 80 191 257 5.27e-20 89.0
MS.gene043344.t1 AT3G55730 58.824 68 28 0 14 81 89 156 1.24e-19 88.6
MS.gene043344.t1 AT5G61420 72.917 48 13 0 47 94 2 49 3.31e-19 85.9
MS.gene043344.t1 AT5G58850 52.941 68 32 0 14 81 138 205 4.12e-19 87.0
MS.gene043344.t1 AT5G49620 40.336 119 55 2 12 114 60 178 9.82e-19 85.1
MS.gene043344.t1 AT4G37260 52.941 68 32 0 14 81 46 113 1.05e-18 85.1
MS.gene043344.t1 AT1G69560 51.316 76 36 1 8 82 133 208 1.12e-18 85.1
MS.gene043344.t1 AT1G69560 51.316 76 36 1 8 82 149 224 1.27e-18 85.1
MS.gene043344.t1 AT5G11050 51.471 68 33 0 14 81 138 205 1.37e-18 85.5
MS.gene043344.t1 AT3G27785 47.500 80 40 1 14 91 222 301 1.46e-18 85.5
MS.gene043344.t1 AT5G02320 50.725 69 34 0 14 82 160 228 1.83e-18 85.9
MS.gene043344.t1 AT5G02320 50.725 69 34 0 14 82 160 228 1.83e-18 85.9
MS.gene043344.t1 AT5G02320 50.725 69 34 0 14 82 100 168 2.23e-18 85.5
MS.gene043344.t1 AT1G26780 55.714 70 30 1 8 76 124 193 2.57e-18 83.2
MS.gene043344.t1 AT1G26780 52.000 75 35 1 8 81 124 198 3.36e-18 84.0
MS.gene043344.t1 AT3G09370 47.619 84 40 1 14 93 168 251 3.41e-18 84.7
MS.gene043344.t1 AT3G09370 47.619 84 40 1 14 93 163 246 3.54e-18 84.7
MS.gene043344.t1 AT5G67300 51.471 68 33 0 14 81 39 106 3.62e-18 83.2
MS.gene043344.t1 AT3G09370 47.619 84 40 1 14 93 176 259 4.33e-18 84.7
MS.gene043344.t1 AT2G23290 51.471 68 33 0 14 81 46 113 5.42e-18 82.8
MS.gene043344.t1 AT1G17950 52.941 68 32 0 14 81 38 105 9.37e-18 81.3
MS.gene043344.t1 AT3G50060 50.000 68 34 0 14 81 39 106 1.42e-17 81.6
MS.gene043344.t1 AT4G32730 47.826 69 36 0 14 82 120 188 2.04e-17 82.8
MS.gene043344.t1 AT4G32730 47.826 69 36 0 14 82 120 188 2.04e-17 82.8
MS.gene043344.t1 AT4G32730 47.826 69 36 0 14 82 120 188 2.04e-17 82.8
MS.gene043344.t1 AT4G32730 47.826 69 36 0 14 82 120 188 2.04e-17 82.8
MS.gene043344.t1 AT4G32730 47.826 69 36 0 14 82 120 188 2.24e-17 82.8
MS.gene043344.t1 AT3G29020 40.594 101 53 2 14 107 100 200 5.71e-17 79.7
MS.gene043344.t1 AT5G15310 73.810 42 11 0 54 95 9 50 7.14e-17 78.6
MS.gene043344.t1 AT3G29020 41.237 97 50 2 14 103 98 194 1.04e-16 77.8
MS.gene043344.t1 AT4G25560 67.347 49 16 0 37 85 3 51 1.13e-16 77.4
MS.gene043344.t1 AT5G40430 45.205 73 40 0 14 86 86 158 1.46e-16 77.8
MS.gene043344.t1 AT4G33450 48.529 68 35 0 14 81 52 119 1.49e-16 77.8
MS.gene043344.t1 AT5G17800 47.297 74 39 0 12 85 124 197 7.22e-16 77.0
MS.gene043344.t1 AT5G11510 44.928 69 38 0 14 82 114 182 8.60e-16 78.2
MS.gene043344.t1 AT5G11510 44.928 69 38 0 14 82 114 182 8.60e-16 78.2
MS.gene043344.t1 AT5G11510 44.928 69 38 0 14 82 114 182 8.60e-16 78.2
MS.gene043344.t1 AT5G11510 44.928 69 38 0 14 82 114 182 1.09e-15 77.8
MS.gene043344.t1 AT5G11510 44.928 69 38 0 14 82 114 182 1.12e-15 77.8
MS.gene043344.t1 AT4G00540 50.725 69 34 0 14 82 139 207 3.16e-15 75.9
MS.gene043344.t1 AT1G73410 52.941 68 32 0 14 81 39 106 3.72e-15 73.9
MS.gene043344.t1 AT1G22640 48.571 70 34 1 54 121 16 85 4.19e-15 72.4
MS.gene043344.t1 AT4G00540 50.725 69 34 0 14 82 137 205 4.31e-15 75.5
MS.gene043344.t1 AT1G73410 52.941 68 32 0 14 81 39 106 5.05e-15 72.8
MS.gene043344.t1 AT5G59780 62.791 43 16 0 39 81 4 46 5.06e-14 68.9
MS.gene043344.t1 AT3G46130 62.791 43 16 0 39 81 4 46 9.79e-14 68.9
MS.gene043344.t1 AT2G37630 44.928 69 38 0 12 80 38 106 5.96e-13 68.9
MS.gene043344.t1 AT1G74650 65.000 40 14 0 44 83 2 41 8.31e-13 67.4
MS.gene043344.t1 AT1G74430 50.980 51 25 0 44 94 9 59 1.07e-12 66.2
MS.gene043344.t1 AT5G39700 43.056 72 40 1 14 85 89 159 1.44e-12 65.5
MS.gene043344.t1 AT3G28910 64.103 39 14 0 44 82 2 40 3.34e-12 65.5
MS.gene043344.t1 AT1G14350 31.902 163 85 5 14 159 58 211 1.64e-11 64.7
MS.gene043344.t1 AT1G14350 31.902 163 85 5 14 159 58 211 1.64e-11 64.7
MS.gene043344.t1 AT5G14340 56.818 44 19 0 54 97 10 53 1.73e-11 62.4
MS.gene043344.t1 AT2G02820 41.176 68 40 0 14 81 63 130 2.59e-11 64.3
MS.gene043344.t1 AT2G02820 41.176 68 40 0 14 81 63 130 2.91e-11 63.9
MS.gene043344.t1 AT2G02820 41.176 68 40 0 14 81 63 130 5.95e-11 62.8

Find 59 sgRNAs with CRISPR-Local

Find 85 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAAATAGCAACATAAATT+TGG 0.073451 2.2:+10282422 MS.gene043344:CDS
AATACAAATCCTTGTTATTT+TGG 0.086118 2.2:+10282603 MS.gene043344:CDS
CCATCATTTCTGAACTTATT+AGG 0.176951 2.2:+10282342 MS.gene043344:CDS
ATTCTCAGATCAGCTTTATT+AGG 0.234361 2.2:+10282300 MS.gene043344:CDS
TATTTCATTGTCTGTTCTTC+CGG 0.234826 2.2:-10282169 None:intergenic
GCGGCTAGCTTTAACAATTC+AGG 0.240329 2.2:-10282387 None:intergenic
AACAGGAATAATGGCTTATT+AGG 0.278282 2.2:+10282552 MS.gene043344:CDS
AGCTGATCTGAGAATATTAA+TGG 0.303694 2.2:-10282292 None:intergenic
ATTTCATTGTCTGTTCTTCC+GGG 0.338932 2.2:-10282168 None:intergenic
TTAAATAGCAACATAAATTT+GGG 0.340640 2.2:+10282423 MS.gene043344:CDS
AACCTTCCTCTCTTGATATC+AGG 0.347637 2.2:-10281673 None:intergenic
TTCAGAAATGATGGGTTCAT+TGG 0.357638 2.2:-10282333 None:intergenic
CCTAATAAGTTCAGAAATGA+TGG 0.368616 2.2:-10282342 None:intergenic
CAAAGCCACAACAGGAATAA+TGG 0.373746 2.2:+10282543 MS.gene043344:CDS
ACTACTGGAACACGCACATT+AGG 0.393806 2.2:+10282196 MS.gene043344:CDS
AGACGTGGAGTATGAGTAAC+AGG 0.402224 2.2:-10282246 None:intergenic
TTTCATTGCCTAAATAATGA+TGG 0.404066 2.2:+10282660 MS.gene043344:CDS
CGGCTAGCTTTAACAATTCA+GGG 0.404962 2.2:-10282386 None:intergenic
ATTCAGCTCCACAGTGTCTT+GGG 0.419817 2.2:+10281721 MS.gene043344:CDS
CGAAATTCCAGAGGGTACTT+TGG 0.436494 2.2:+10282818 MS.gene043344:CDS
TCAGAAATGATGGGTTCATT+GGG 0.441253 2.2:-10282332 None:intergenic
TATTCAGCTCCACAGTGTCT+TGG 0.453274 2.2:+10281720 MS.gene043344:CDS
ACAATGAAATAAAGAACTAC+TGG 0.460692 2.2:+10282181 MS.gene043344:CDS
TACCAACTCAAAGCCACAAC+AGG 0.461419 2.2:+10282535 MS.gene043344:CDS
GTATTTGAAATTGATCTTGA+GGG 0.468730 2.2:-10282515 None:intergenic
AATACTCTCTTCTTCTTCAA+AGG 0.469466 2.2:-10281698 None:intergenic
CTCAGATCAGCTTTATTAGG+AGG 0.473968 2.2:+10282303 MS.gene043344:CDS
GCAAGAGTTGTCGCCTTCGA+TGG 0.493189 2.2:+10281635 MS.gene043344:CDS
ATAAGCCATTATTCCTGTTG+TGG 0.493457 2.2:-10282548 None:intergenic
TATGTTGCTATTTAATAATG+TGG 0.498309 2.2:-10282415 None:intergenic
AAATGATGGGTTCATTGGGT+TGG 0.498615 2.2:-10282328 None:intergenic
AAACAGTACGGGATATGAAT+CGG 0.507142 2.2:+10282689 MS.gene043344:CDS
GGCGTTGGTGTCGTTGATAA+AGG 0.507344 2.2:-10282726 None:intergenic
GGTATTTGAAATTGATCTTG+AGG 0.514597 2.2:-10282516 None:intergenic
TTCCTGTTGTGGCTTTGAGT+TGG 0.540848 2.2:-10282537 None:intergenic
ACATATGTTGGTGATGGCGT+TGG 0.552968 2.2:-10282741 None:intergenic
TTAATGTCCAAAGTACCCTC+TGG 0.555413 2.2:-10282825 None:intergenic
TAGCTGCACAGAGGAAGAGA+GGG 0.566398 2.2:+10282767 MS.gene043344:CDS
CTATTCACATATGTTGGTGA+TGG 0.573047 2.2:-10282747 None:intergenic
ATTTAATAATGTGGCCGTCG+CGG 0.583877 2.2:-10282406 None:intergenic
ATATTATTACAGGTCTTCAA+AGG 0.587096 2.2:+10281608 MS.gene043344:CDS
TCATTTCTGAACTTATTAGG+TGG 0.587317 2.2:+10282345 MS.gene043344:CDS
ATTACAGGTCTTCAAAGGTG+TGG 0.593786 2.2:+10281613 MS.gene043344:CDS
GCTATAGCTGCTAGATTACC+CGG 0.599027 2.2:+10282150 MS.gene043344:CDS
ATAGCTGCACAGAGGAAGAG+AGG 0.602380 2.2:+10282766 MS.gene043344:CDS
TCAAATAGTTTGTCCATCGA+AGG 0.602928 2.2:-10281648 None:intergenic
CTAATAAGTTCAGAAATGAT+GGG 0.614515 2.2:-10282341 None:intergenic
ATTGTTAAAGCTAGCCGCGA+CGG 0.614544 2.2:+10282392 MS.gene043344:CDS
GTGCAGCTATTCACATATGT+TGG 0.620924 2.2:-10282753 None:intergenic
GACCTGATATCAAGAGAGGA+AGG 0.621894 2.2:+10281671 MS.gene043344:CDS
TTGAGACCTGATATCAAGAG+AGG 0.625731 2.2:+10281667 MS.gene043344:CDS
AAATCCTCTCCAAAATAACA+AGG 0.633825 2.2:-10282612 None:intergenic
TTCAAGTTCGAAATTCCAGA+GGG 0.644657 2.2:+10282810 MS.gene043344:CDS
AGGAAAAGACTACTTCGAAG+TGG 0.647134 2.2:+10282216 MS.gene043344:CDS
ATTCAAGTTCGAAATTCCAG+AGG 0.654379 2.2:+10282809 MS.gene043344:CDS
TGATCTGAGAATATTAATGG+AGG 0.677931 2.2:-10282289 None:intergenic
TCAAATAGATGATCGAGACG+TGG 0.708158 2.2:-10282261 None:intergenic
ACTTGTTTCCCAAGACACTG+TGG 0.717447 2.2:-10281729 None:intergenic
ATATGTGAATAGCTGCACAG+AGG 0.785270 2.2:+10282758 MS.gene043344:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTACATAAAGAAATTT+AGG - chr2.2:10281986-10282005 None:intergenic 10.0%
!! ATTAAATAGCAACATAAATT+TGG + chr2.2:10282422-10282441 MS.gene043344:CDS 15.0%
!! TAGAAAATTGGTTAAATATA+TGG - chr2.2:10282034-10282053 None:intergenic 15.0%
!! TTAAATAGCAACATAAATTT+GGG + chr2.2:10282423-10282442 MS.gene043344:CDS 15.0%
!! TTCTACTATTAGAAAAATTT+AGG - chr2.2:10281792-10281811 None:intergenic 15.0%
!! TCATTCCAATTAAAATTTGA+TGG - chr2.2:10281763-10281782 None:intergenic 20.0%
!!! AATACAAATCCTTGTTATTT+TGG + chr2.2:10282603-10282622 MS.gene043344:CDS 20.0%
!!! AGTAGAAAAATATATCGATT+TGG + chr2.2:10281805-10281824 MS.gene043344:intron 20.0%
!!! TATGTTGCTATTTAATAATG+TGG - chr2.2:10282418-10282437 None:intergenic 20.0%
!!! TTTTGCTTGAATATTATTAC+AGG + chr2.2:10281598-10281617 MS.gene043344:CDS 20.0%
!!! TTTTGTTTCCATCATTATTT+AGG - chr2.2:10282671-10282690 None:intergenic 20.0%
! ACAATGAAATAAAGAACTAC+TGG + chr2.2:10282181-10282200 MS.gene043344:CDS 25.0%
! ATATTATTACAGGTCTTCAA+AGG + chr2.2:10281608-10281627 MS.gene043344:CDS 25.0%
! ATCAGTACAAATGGATATAT+TGG - chr2.2:10281861-10281880 None:intergenic 25.0%
! CTAATAAGTTCAGAAATGAT+GGG - chr2.2:10282344-10282363 None:intergenic 25.0%
! TTTCATTGCCTAAATAATGA+TGG + chr2.2:10282660-10282679 MS.gene043344:CDS 25.0%
!! GTATTTGAAATTGATCTTGA+GGG - chr2.2:10282518-10282537 None:intergenic 25.0%
!!! ACTTTTTCACACTAGAAAAT+TGG - chr2.2:10282046-10282065 None:intergenic 25.0%
!!! TGTGTCCATCAAATTTTAAT+TGG + chr2.2:10281755-10281774 MS.gene043344:intron 25.0%
AAATCCTCTCCAAAATAACA+AGG - chr2.2:10282615-10282634 None:intergenic 30.0%
AACAGGAATAATGGCTTATT+AGG + chr2.2:10282552-10282571 MS.gene043344:CDS 30.0%
AATACTCTCTTCTTCTTCAA+AGG - chr2.2:10281701-10281720 None:intergenic 30.0%
ACATTCTACACAATAGACTA+AGG - chr2.2:10281952-10281971 None:intergenic 30.0%
ACCATGAACATGAACATTAT+AGG + chr2.2:10282121-10282140 MS.gene043344:intron 30.0%
ACCTATAATGTTCATGTTCA+TGG - chr2.2:10282125-10282144 None:intergenic 30.0%
AGCTGATCTGAGAATATTAA+TGG - chr2.2:10282295-10282314 None:intergenic 30.0%
ATGAACATGAACATTATAGG+TGG + chr2.2:10282124-10282143 MS.gene043344:intron 30.0%
CCATCATTTCTGAACTTATT+AGG + chr2.2:10282342-10282361 MS.gene043344:CDS 30.0%
CCTAATAAGTTCAGAAATGA+TGG - chr2.2:10282345-10282364 None:intergenic 30.0%
GAAAATTATTAACCTCTACG+AGG - chr2.2:10281930-10281949 None:intergenic 30.0%
TATTTCATTGTCTGTTCTTC+CGG - chr2.2:10282172-10282191 None:intergenic 30.0%
TCATTTCTGAACTTATTAGG+TGG + chr2.2:10282345-10282364 MS.gene043344:CDS 30.0%
TGATCTGAGAATATTAATGG+AGG - chr2.2:10282292-10282311 None:intergenic 30.0%
TGATGGAAACAAAAACAGTA+CGG + chr2.2:10282677-10282696 MS.gene043344:CDS 30.0%
! GGTATTTGAAATTGATCTTG+AGG - chr2.2:10282519-10282538 None:intergenic 30.0%
! TTTTATCATTAACCTCGTAG+AGG + chr2.2:10281915-10281934 MS.gene043344:intron 30.0%
!! ATTCTCAGATCAGCTTTATT+AGG + chr2.2:10282300-10282319 MS.gene043344:CDS 30.0%
!!! AAATCCTTGTTATTTTGGAG+AGG + chr2.2:10282608-10282627 MS.gene043344:CDS 30.0%
AAACAGTACGGGATATGAAT+CGG + chr2.2:10282689-10282708 MS.gene043344:CDS 35.0%
ATAAGCCATTATTCCTGTTG+TGG - chr2.2:10282551-10282570 None:intergenic 35.0%
ATTTCATTGTCTGTTCTTCC+GGG - chr2.2:10282171-10282190 None:intergenic 35.0%
GATGGAAACAAAAACAGTAC+GGG + chr2.2:10282678-10282697 MS.gene043344:CDS 35.0%
! ATTCAAGTTCGAAATTCCAG+AGG + chr2.2:10282809-10282828 MS.gene043344:CDS 35.0%
! CTATTCACATATGTTGGTGA+TGG - chr2.2:10282750-10282769 None:intergenic 35.0%
! TCAAATAGTTTGTCCATCGA+AGG - chr2.2:10281651-10281670 None:intergenic 35.0%
! TTCAAGTTCGAAATTCCAGA+GGG + chr2.2:10282810-10282829 MS.gene043344:CDS 35.0%
!! TCAGAAATGATGGGTTCATT+GGG - chr2.2:10282335-10282354 None:intergenic 35.0%
!! TTCAGAAATGATGGGTTCAT+TGG - chr2.2:10282336-10282355 None:intergenic 35.0%
AACCTTCCTCTCTTGATATC+AGG - chr2.2:10281676-10281695 None:intergenic 40.0%
AGGAAAAGACTACTTCGAAG+TGG + chr2.2:10282216-10282235 MS.gene043344:CDS 40.0%
ATATGTGAATAGCTGCACAG+AGG + chr2.2:10282758-10282777 MS.gene043344:CDS 40.0%
ATTACAGGTCTTCAAAGGTG+TGG + chr2.2:10281613-10281632 MS.gene043344:CDS 40.0%
ATTTAATAATGTGGCCGTCG+CGG - chr2.2:10282409-10282428 None:intergenic 40.0%
CAAAGCCACAACAGGAATAA+TGG + chr2.2:10282543-10282562 MS.gene043344:CDS 40.0%
GTGCAGCTATTCACATATGT+TGG - chr2.2:10282756-10282775 None:intergenic 40.0%
TCAAATAGATGATCGAGACG+TGG - chr2.2:10282264-10282283 None:intergenic 40.0%
TTGAGACCTGATATCAAGAG+AGG + chr2.2:10281667-10281686 MS.gene043344:CDS 40.0%
! ATCGTACTGATCACCTATAG+CGG - chr2.2:10281893-10281912 None:intergenic 40.0%
! TTAATGTCCAAAGTACCCTC+TGG - chr2.2:10282828-10282847 None:intergenic 40.0%
!! AAATGATGGGTTCATTGGGT+TGG - chr2.2:10282331-10282350 None:intergenic 40.0%
!! CGGCTAGCTTTAACAATTCA+GGG - chr2.2:10282389-10282408 None:intergenic 40.0%
!! CTCAGATCAGCTTTATTAGG+AGG + chr2.2:10282303-10282322 MS.gene043344:CDS 40.0%
!! TCGATTTGGATTCTCTTCAG+CGG + chr2.2:10281819-10281838 MS.gene043344:intron 40.0%
ACTACTGGAACACGCACATT+AGG + chr2.2:10282196-10282215 MS.gene043344:CDS 45.0%
ACTTGTTTCCCAAGACACTG+TGG - chr2.2:10281732-10281751 None:intergenic 45.0%
AGACGTGGAGTATGAGTAAC+AGG - chr2.2:10282249-10282268 None:intergenic 45.0%
ATTCAGCTCCACAGTGTCTT+GGG + chr2.2:10281721-10281740 MS.gene043344:CDS 45.0%
ATTGTTAAAGCTAGCCGCGA+CGG + chr2.2:10282392-10282411 MS.gene043344:CDS 45.0%
GACCTGATATCAAGAGAGGA+AGG + chr2.2:10281671-10281690 MS.gene043344:CDS 45.0%
GCTATAGCTGCTAGATTACC+CGG + chr2.2:10282150-10282169 MS.gene043344:CDS 45.0%
TACCAACTCAAAGCCACAAC+AGG + chr2.2:10282535-10282554 MS.gene043344:CDS 45.0%
TATTCAGCTCCACAGTGTCT+TGG + chr2.2:10281720-10281739 MS.gene043344:CDS 45.0%
! CCATTTGTACTGATCACCTG+CGG + chr2.2:10281867-10281886 MS.gene043344:intron 45.0%
!! ACATATGTTGGTGATGGCGT+TGG - chr2.2:10282744-10282763 None:intergenic 45.0%
!! CGAAATTCCAGAGGGTACTT+TGG + chr2.2:10282818-10282837 MS.gene043344:CDS 45.0%
!! GCGGCTAGCTTTAACAATTC+AGG - chr2.2:10282390-10282409 None:intergenic 45.0%
!! TTCCTGTTGTGGCTTTGAGT+TGG - chr2.2:10282540-10282559 None:intergenic 45.0%
ATAGCTGCACAGAGGAAGAG+AGG + chr2.2:10282766-10282785 MS.gene043344:CDS 50.0%
CCGCAGGTGATCAGTACAAA+TGG - chr2.2:10281870-10281889 None:intergenic 50.0%
TAGCTGCACAGAGGAAGAGA+GGG + chr2.2:10282767-10282786 MS.gene043344:CDS 50.0%
!! GGCGTTGGTGTCGTTGATAA+AGG - chr2.2:10282729-10282748 None:intergenic 50.0%
CTTCAGCGGCTGCATGATGT+TGG + chr2.2:10281833-10281852 MS.gene043344:intron 55.0%
GCAAGAGTTGTCGCCTTCGA+TGG + chr2.2:10281635-10281654 MS.gene043344:CDS 55.0%
TGATCACCTATAGCGGCCGC+AGG - chr2.2:10281886-10281905 None:intergenic 60.0%
TGATCACCTGCGGCCGCTAT+AGG + chr2.2:10281877-10281896 MS.gene043344:intron 60.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 10281589 10282860 10281589 ID=MS.gene043344
chr2.2 mRNA 10281589 10282860 10281589 ID=MS.gene043344.t1;Parent=MS.gene043344
chr2.2 exon 10281589 10281749 10281589 ID=MS.gene043344.t1.exon1;Parent=MS.gene043344.t1
chr2.2 CDS 10281589 10281749 10281589 ID=cds.MS.gene043344.t1;Parent=MS.gene043344.t1
chr2.2 exon 10282143 10282860 10282143 ID=MS.gene043344.t1.exon2;Parent=MS.gene043344.t1
chr2.2 CDS 10282143 10282860 10282143 ID=cds.MS.gene043344.t1;Parent=MS.gene043344.t1
Gene Sequence

>MS.gene043344

ATGAACTTGTTTTGCTTGAATATTATTACAGGTCTTCAAAGGTGTGGCAAGAGTTGTCGCCTTCGATGGACAAACTATTTGAGACCTGATATCAAGAGAGGAAGGTTCTCCTTTGAAGAAGAAGAGAGTATTATTCAGCTCCACAGTGTCTTGGGAAACAAGTACGTGTGTCCATCAAATTTTAATTGGAATGAAAGCGTCCTAAATTTTTCTAATAGTAGAAAAATATATCGATTTGGATTCTCTTCAGCGGCTGCATGATGTTGGTACCAATATATCCATTTGTACTGATCACCTGCGGCCGCTATAGGTGATCAGTACGATAATTTTATCATTAACCTCGTAGAGGTTAATAATTTTCCTTAGTCTATTGTGTAGAATGTGTCTCACTTGTCCTAAATTTCTTTATGTAAAATAAAAATACATGATTAACTTCTTATATCCATATATTTAACCAATTTTCTAGTGTGAAAAAGTTTTAACTTGTTGTTTTTGTTGTTTAAAGACTTTATGCTAAGTGCTTTTATTGTTTACCATGAACATGAACATTATAGGTGGTCTGCTATAGCTGCTAGATTACCCGGAAGAACAGACAATGAAATAAAGAACTACTGGAACACGCACATTAGGAAAAGACTACTTCGAAGTGGAATCGATCCTGTTACTCATACTCCACGTCTCGATCATCTATTTGACATGTCCTCCATTAATATTCTCAGATCAGCTTTATTAGGAGGAACCAACCCAATGAACCCATCATTTCTGAACTTATTAGGTGGTGCTCAAGCTTTGATGAACCCTGAATTGTTAAAGCTAGCCGCGACGGCCACATTATTAAATAGCAACATAAATTTGGGTTCACAGAATCAACAACAGATAAATAATGCTGCTAATAGTACTCAACAACAAGTGCAAAATCAAGTTTACCCTCAAGATCAATTTCAAATACCAACTCAAAGCCACAACAGGAATAATGGCTTATTAGGAAACATGAGTTGTTCAAGTTCAGCTGAAAATACAAATCCTTGTTATTTTGGAGAGGATTTGATTTCTAAACAATATTCAGAATTGTTTCATTGCCTAAATAATGATGGAAACAAAAACAGTACGGGATATGAATCGGTTATATCGACTACTCCTTTATCAACGACACCAACGCCATCACCAACATATGTGAATAGCTGCACAGAGGAAGAGAGGGATACATATTGCAGTGACATATTCAAGTTCGAAATTCCAGAGGGTACTTTGGACATTAATGATTTCTTGTAA
Protein sequence

>MS.gene043344.t1

MNLFCLNIITGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEESIIQLHSVLGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRSGIDPVTHTPRLDHLFDMSSINILRSALLGGTNPMNPSFLNLLGGAQALMNPELLKLAATATLLNSNINLGSQNQQQINNAANSTQQQVQNQVYPQDQFQIPTQSHNRNNGLLGNMSCSSSAENTNPCYFGEDLISKQYSELFHCLNNDGNKNSTGYESVISTTPLSTTPTPSPTYVNSCTEEERDTYCSDIFKFEIPEGTLDINDFL