Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043378.t1 | XP_013465039.1 | 94.9 | 236 | 12 | 0 | 1 | 236 | 1 | 236 | 3.50E-133 | 484.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043378.t1 | Q8GZA8 | 69.8 | 235 | 71 | 0 | 2 | 236 | 3 | 237 | 9.4e-103 | 374.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043378.t1 | A0A072VAL1 | 94.9 | 236 | 12 | 0 | 1 | 236 | 1 | 236 | 2.5e-133 | 484.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene043378.t1 | TF | ULT |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043378.t1 | MTR_2g090080 | 97.034 | 236 | 7 | 0 | 1 | 236 | 1 | 236 | 1.52e-173 | 476 |
MS.gene043378.t1 | MTR_0072s0040 | 77.542 | 236 | 53 | 0 | 1 | 236 | 4 | 239 | 5.70e-139 | 389 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043378.t1 | AT4G28190 | 69.787 | 235 | 71 | 0 | 2 | 236 | 3 | 237 | 1.97e-124 | 352 |
MS.gene043378.t1 | AT4G28190 | 61.654 | 266 | 71 | 1 | 2 | 236 | 3 | 268 | 9.51e-118 | 337 |
MS.gene043378.t1 | AT2G20825 | 66.524 | 233 | 71 | 2 | 5 | 236 | 1 | 227 | 2.56e-114 | 327 |
Find 50 sgRNAs with CRISPR-Local
Find 124 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGATCGGAACATTTCCAATT+TGG | 0.206984 | 2.2:+9916778 | None:intergenic |
GGAAATGGAAGAACAATATC+TGG | 0.261820 | 2.2:-9917017 | MS.gene043378:CDS |
ATGCTTTAGCTGATCCAAAT+TGG | 0.269884 | 2.2:-9916792 | MS.gene043378:CDS |
ATTGATGGAGTGAAGAAAAT+TGG | 0.281708 | 2.2:-9918047 | MS.gene043378:CDS |
GTGGCACGCCTGTCCATTAT+TGG | 0.286780 | 2.2:+9916900 | None:intergenic |
GCTGCGTTCGAGAAACATTC+TGG | 0.350781 | 2.2:-9917054 | MS.gene043378:CDS |
TGCACTTCTTGTGTGTGCTT+TGG | 0.357522 | 2.2:-9915796 | MS.gene043378:CDS |
GGTTCCCACAAATCCAATAA+TGG | 0.386744 | 2.2:-9916913 | MS.gene043378:CDS |
TTGCACTTGCCAGACTTGTA+TGG | 0.413290 | 2.2:-9915749 | MS.gene043378:CDS |
GAAGAGAAACAGCTAGGAAA+TGG | 0.415093 | 2.2:-9917032 | MS.gene043378:CDS |
TGTTCAGTGATGAAGAGTTA+AGG | 0.424542 | 2.2:-9918073 | MS.gene043378:CDS |
GACATTCCTCTTTAGTTCTC+AGG | 0.425086 | 2.2:+9916827 | None:intergenic |
CTGTCCATTATTGGATTTGT+GGG | 0.429490 | 2.2:+9916909 | None:intergenic |
ATCACTTGTGAATGCATCCC+TGG | 0.433805 | 2.2:-9917933 | MS.gene043378:CDS |
GTGATGCTGTTGGAAGGCTT+AGG | 0.446422 | 2.2:-9917980 | MS.gene043378:CDS |
TTGTAAAATCCATACAAGTC+TGG | 0.450441 | 2.2:+9915740 | None:intergenic |
AATATCTGGGTAACAGTTGA+TGG | 0.450966 | 2.2:-9917003 | MS.gene043378:CDS |
GTTCAGTGATGAAGAGTTAA+GGG | 0.457322 | 2.2:-9918072 | MS.gene043378:CDS |
GAAGAGTTAAGGGATATTGA+TGG | 0.458252 | 2.2:-9918062 | MS.gene043378:CDS |
CCTGTCCATTATTGGATTTG+TGG | 0.462739 | 2.2:+9916908 | None:intergenic |
GATTGAACATACTTGTCATA+TGG | 0.463333 | 2.2:+9916754 | None:intergenic |
CATGATATGAACTCAAGCTT+TGG | 0.464804 | 2.2:+9915711 | None:intergenic |
TGATGCTGTTGGAAGGCTTA+GGG | 0.470994 | 2.2:-9917979 | MS.gene043378:CDS |
ATTGGATTTGTGGGAACCAT+TGG | 0.483851 | 2.2:+9916918 | None:intergenic |
GAATGTTTCTCGAACGCAGC+AGG | 0.502251 | 2.2:+9917057 | None:intergenic |
AAAGGACCTTCTTCACAGCC+AGG | 0.526633 | 2.2:+9917915 | None:intergenic |
AACGGGTTAGAGAGAGAAAG+TGG | 0.529218 | 2.2:-9918104 | MS.gene043378:CDS |
TGCATCCCTGGCTGTGAAGA+AGG | 0.533173 | 2.2:-9917921 | MS.gene043378:intron |
CATAGATATGGTGATGCTGT+TGG | 0.550066 | 2.2:-9917990 | MS.gene043378:CDS |
CCACAAATCCAATAATGGAC+AGG | 0.550482 | 2.2:-9916908 | MS.gene043378:CDS |
TGTGATGATGAAGAAGAAAG+AGG | 0.552017 | 2.2:-9915868 | MS.gene043378:CDS |
CAGCTAAAGCATCATGGTGA+CGG | 0.575142 | 2.2:+9916803 | None:intergenic |
GAAATGGAAGAACAATATCT+GGG | 0.577525 | 2.2:-9917016 | MS.gene043378:CDS |
GTTCCGCCTGAGAACTAAAG+AGG | 0.578750 | 2.2:-9916833 | MS.gene043378:CDS |
TTGGATCAGCTAAAGCATCA+TGG | 0.592054 | 2.2:+9916797 | None:intergenic |
ATACTTGTCATATGGAAGAT+CGG | 0.592135 | 2.2:+9916762 | None:intergenic |
TAACTCTTCATCACTGAACA+TGG | 0.592135 | 2.2:+9918076 | None:intergenic |
GGTTGTACTAGTCATAGATA+TGG | 0.606067 | 2.2:-9918002 | MS.gene043378:CDS |
ATTCTGGAAGAGAAACAGCT+AGG | 0.616300 | 2.2:-9917038 | MS.gene043378:CDS |
GGTAACAGTTGATGGCGAGA+AGG | 0.622326 | 2.2:-9916995 | MS.gene043378:CDS |
AAGGACCTTCTTCACAGCCA+GGG | 0.625492 | 2.2:+9917916 | None:intergenic |
ACTCATTCTGCAGCATGCAA+AGG | 0.631904 | 2.2:-9915820 | MS.gene043378:CDS |
TACAGCAGATAAACTCGTCA+CGG | 0.635905 | 2.2:+9916878 | None:intergenic |
CTAGATGTAACAAAGAGCGC+AGG | 0.644243 | 2.2:-9916855 | MS.gene043378:CDS |
ATTCCTCTTTAGTTCTCAGG+CGG | 0.652096 | 2.2:+9916830 | None:intergenic |
GATATGGTGATGCTGTTGGA+AGG | 0.656454 | 2.2:-9917986 | MS.gene043378:CDS |
GGCAGTCGCAGAGTTTACAG+AGG | 0.678401 | 2.2:-9915847 | MS.gene043378:CDS |
GAATGTATTGAAGTGATGTG+TGG | 0.698821 | 2.2:-9918023 | MS.gene043378:CDS |
ACGGGTTAGAGAGAGAAAGT+GGG | 0.717955 | 2.2:-9918103 | MS.gene043378:CDS |
AGCAGATAAACTCGTCACGG+TGG | 0.722161 | 2.2:+9916881 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTCTCTTATTATTAAAAAT+GGG | - | chr2.2:9916087-9916106 | MS.gene043378:intron | 10.0% |
!! | TATTCTCTTATTATTAAAAA+TGG | - | chr2.2:9916086-9916105 | MS.gene043378:intron | 10.0% |
!! | TAAAAAACATAGTGAAAATT+AGG | + | chr2.2:9916737-9916756 | None:intergenic | 15.0% |
!! | TCTATAAATTTATGTATTGA+AGG | - | chr2.2:9917194-9917213 | MS.gene043378:intron | 15.0% |
!! | TTCTCTTATTATTAAAAATG+GGG | - | chr2.2:9916088-9916107 | MS.gene043378:intron | 15.0% |
!!! | TGTTTTGTTTCATTTAATAT+TGG | - | chr2.2:9916182-9916201 | MS.gene043378:intron | 15.0% |
!! | AAAAATTATCACAAGAAAAG+GGG | + | chr2.2:9917149-9917168 | None:intergenic | 20.0% |
!! | ACAAAAATTATCACAAGAAA+AGG | + | chr2.2:9917151-9917170 | None:intergenic | 20.0% |
!! | AGAGATATAATAGATAGAAA+AGG | + | chr2.2:9915939-9915958 | None:intergenic | 20.0% |
!! | ATAGATAAACAAAAGTTACT+TGG | + | chr2.2:9917179-9917198 | None:intergenic | 20.0% |
!! | CAAAAATTATCACAAGAAAA+GGG | + | chr2.2:9917150-9917169 | None:intergenic | 20.0% |
!! | TAATACTAGAACTAGAATAA+TGG | + | chr2.2:9917276-9917295 | None:intergenic | 20.0% |
!! | TGAAGGTAAATAATTAAACT+TGG | + | chr2.2:9916648-9916667 | None:intergenic | 20.0% |
!! | TTATCAAAAACTTAATGCAT+TGG | + | chr2.2:9916374-9916393 | None:intergenic | 20.0% |
!!! | ACTTTTCAACTTTTTTACAA+TGG | - | chr2.2:9917874-9917893 | MS.gene043378:intron | 20.0% |
!!! | TGAATAAATTTTTGCCATTT+AGG | + | chr2.2:9917762-9917781 | None:intergenic | 20.0% |
! | AATTTATGTATTGAAGGCAA+TGG | - | chr2.2:9917200-9917219 | MS.gene043378:intron | 25.0% |
! | ATTTGTCAAAGTGAAAACTT+TGG | - | chr2.2:9916308-9916327 | MS.gene043378:intron | 25.0% |
! | GTGAGACATTTAAACAAATT+CGG | + | chr2.2:9917661-9917680 | None:intergenic | 25.0% |
! | TTATGTAAGGTTCTACTATA+AGG | - | chr2.2:9916453-9916472 | MS.gene043378:intron | 25.0% |
! | TTGCTTTAATTCTTAGAATG+TGG | - | chr2.2:9916508-9916527 | MS.gene043378:intron | 25.0% |
! | TTGTCAAAACACTAAATTCT+CGG | + | chr2.2:9917374-9917393 | None:intergenic | 25.0% |
!! | AAAGTCAATGAAATCTGTTT+TGG | - | chr2.2:9916426-9916445 | MS.gene043378:intron | 25.0% |
!! | AACTAGTTTAAAACAGATAG+AGG | + | chr2.2:9916565-9916584 | None:intergenic | 25.0% |
!! | ACCTTTAAAAAAGTAGTAGT+TGG | - | chr2.2:9917480-9917499 | MS.gene043378:intron | 25.0% |
!! | ACTAGTTTAAAACAGATAGA+GGG | + | chr2.2:9916564-9916583 | None:intergenic | 25.0% |
!! | ATTGCATTTTGAATCCTAAA+TGG | - | chr2.2:9917745-9917764 | MS.gene043378:intron | 25.0% |
!!! | ACCAACTACTACTTTTTTAA+AGG | + | chr2.2:9917484-9917503 | None:intergenic | 25.0% |
!!! | AGCATTTTGATTCAAAATGA+AGG | + | chr2.2:9916665-9916684 | None:intergenic | 25.0% |
!!! | GTTTTGACAATGCAAATTTA+GGG | - | chr2.2:9917384-9917403 | MS.gene043378:intron | 25.0% |
!!! | TGTTTTGACAATGCAAATTT+AGG | - | chr2.2:9917383-9917402 | MS.gene043378:intron | 25.0% |
AAGTATGTTCAATCTGTTGT+AGG | - | chr2.2:9917088-9917107 | MS.gene043378:intron | 30.0% | |
ATACTTGTCATATGGAAGAT+CGG | + | chr2.2:9917074-9917093 | None:intergenic | 30.0% | |
ATGTGGTTGAAGATATAACT+TGG | + | chr2.2:9917239-9917258 | None:intergenic | 30.0% | |
ATTACATGATTCTAGACAAG+TGG | - | chr2.2:9916333-9916352 | MS.gene043378:intron | 30.0% | |
ATTGATGGAGTGAAGAAAAT+TGG | - | chr2.2:9915786-9915805 | MS.gene043378:CDS | 30.0% | |
CAAATTCGGACAAACATAAA+AGG | + | chr2.2:9917647-9917666 | None:intergenic | 30.0% | |
GAAACAAGTTATAATTCGCT+TGG | + | chr2.2:9916626-9916645 | None:intergenic | 30.0% | |
GAAATGGAAGAACAATATCT+GGG | - | chr2.2:9916817-9916836 | MS.gene043378:CDS | 30.0% | |
GATAGAGGGAAATATAAACA+TGG | + | chr2.2:9916550-9916569 | None:intergenic | 30.0% | |
GATTGAACATACTTGTCATA+TGG | + | chr2.2:9917082-9917101 | None:intergenic | 30.0% | |
GTGAAAATTAGGTCAGATTT+AGG | + | chr2.2:9916726-9916745 | None:intergenic | 30.0% | |
GTTACATTACCTATTATGCA+TGG | - | chr2.2:9917563-9917582 | MS.gene043378:intron | 30.0% | |
TGAAGATATAACTTGGAAAG+TGG | + | chr2.2:9917232-9917251 | None:intergenic | 30.0% | |
TTAAATCAGCCATGCATAAT+AGG | + | chr2.2:9917575-9917594 | None:intergenic | 30.0% | |
TTGTAAAATCCATACAAGTC+TGG | + | chr2.2:9918096-9918115 | None:intergenic | 30.0% | |
TTTAAAGGTAGAACCAAGAT+TGG | + | chr2.2:9917469-9917488 | None:intergenic | 30.0% | |
! | AGACTTGTATGGATTTTACA+AGG | - | chr2.2:9918095-9918114 | MS.gene043378:CDS | 30.0% |
! | AGCAGAACTGTTTTATACAA+TGG | + | chr2.2:9916866-9916885 | None:intergenic | 30.0% |
! | ATGGCTGATTTAAATATGCA+TGG | - | chr2.2:9917582-9917601 | MS.gene043378:intron | 30.0% |
! | GCAGAACTGTTTTATACAAT+GGG | + | chr2.2:9916865-9916884 | None:intergenic | 30.0% |
!!! | AAGCATGTTATGTTGACTTT+TGG | - | chr2.2:9916396-9916415 | MS.gene043378:intron | 30.0% |
!!! | CTGTTTTGGTTTGTTATGTA+AGG | - | chr2.2:9916440-9916459 | MS.gene043378:intron | 30.0% |
AATATCTGGGTAACAGTTGA+TGG | - | chr2.2:9916830-9916849 | MS.gene043378:CDS | 35.0% | |
AATTCTTAGAATGTGGCTAG+TGG | - | chr2.2:9916515-9916534 | MS.gene043378:intron | 35.0% | |
AGAGAATATAAAACGCGACA+CGG | + | chr2.2:9916074-9916093 | None:intergenic | 35.0% | |
AGATCGGAACATTTCCAATT+TGG | + | chr2.2:9917058-9917077 | None:intergenic | 35.0% | |
ATGCTTTAGCTGATCCAAAT+TGG | - | chr2.2:9917041-9917060 | MS.gene043378:CDS | 35.0% | |
CAAGCATTAAAAACAGCCAA+TGG | - | chr2.2:9916899-9916918 | MS.gene043378:CDS | 35.0% | |
CTGTCCATTATTGGATTTGT+GGG | + | chr2.2:9916927-9916946 | None:intergenic | 35.0% | |
GAAGAGTTAAGGGATATTGA+TGG | - | chr2.2:9915771-9915790 | MS.gene043378:CDS | 35.0% | |
GAATGTATTGAAGTGATGTG+TGG | - | chr2.2:9915810-9915829 | MS.gene043378:CDS | 35.0% | |
GGAAATGGAAGAACAATATC+TGG | - | chr2.2:9916816-9916835 | MS.gene043378:CDS | 35.0% | |
GGTTGTACTAGTCATAGATA+TGG | - | chr2.2:9915831-9915850 | MS.gene043378:CDS | 35.0% | |
GTAACTGTGATAGTTCTTTG+AGG | + | chr2.2:9917620-9917639 | None:intergenic | 35.0% | |
GTTCAGTGATGAAGAGTTAA+GGG | - | chr2.2:9915761-9915780 | MS.gene043378:CDS | 35.0% | |
TAACCATGACAGTTCTTTCA+GGG | + | chr2.2:9917547-9917566 | None:intergenic | 35.0% | |
TAACTCTTCATCACTGAACA+TGG | + | chr2.2:9915760-9915779 | None:intergenic | 35.0% | |
TATGAACTCTGTTGTGATGT+TGG | - | chr2.2:9916259-9916278 | MS.gene043378:intron | 35.0% | |
TCTGTACAGAAGATTCAAGT+TGG | - | chr2.2:9917788-9917807 | MS.gene043378:intron | 35.0% | |
TGTTAGTGTAGTGTTAGTGT+CGG | + | chr2.2:9916007-9916026 | None:intergenic | 35.0% | |
TGTTCAGTGATGAAGAGTTA+AGG | - | chr2.2:9915760-9915779 | MS.gene043378:CDS | 35.0% | |
TTAATATTGGCACGTGTCAT+TGG | - | chr2.2:9916195-9916214 | MS.gene043378:intron | 35.0% | |
! | AGGCTTAGGGTTTTTGTTAA+TGG | - | chr2.2:9915867-9915886 | MS.gene043378:CDS | 35.0% |
! | CTGTACAGAAGATTCAAGTT+GGG | - | chr2.2:9917789-9917808 | MS.gene043378:intron | 35.0% |
! | TGTGATGATGAAGAAGAAAG+AGG | - | chr2.2:9917965-9917984 | MS.gene043378:CDS | 35.0% |
! | TTCATTGATTGCTGCATGAA+TGG | - | chr2.2:9917439-9917458 | MS.gene043378:intron | 35.0% |
!! | TGTACAGAAGATTCAAGTTG+GGG | - | chr2.2:9917790-9917809 | MS.gene043378:intron | 35.0% |
!!! | TGGATGGTTGTTTTAATGTG+TGG | - | chr2.2:9916223-9916242 | MS.gene043378:intron | 35.0% |
ATTGGATTTGTGGGAACCAT+TGG | + | chr2.2:9916918-9916937 | None:intergenic | 40.0% | |
CAACCACATTGTAGTAACTC+TGG | - | chr2.2:9917250-9917269 | MS.gene043378:intron | 40.0% | |
CATGAATGGTGTTCCAATCT+TGG | - | chr2.2:9917453-9917472 | MS.gene043378:intron | 40.0% | |
CCTGTCCATTATTGGATTTG+TGG | + | chr2.2:9916928-9916947 | None:intergenic | 40.0% | |
GAAGAGAAACAGCTAGGAAA+TGG | - | chr2.2:9916801-9916820 | MS.gene043378:CDS | 40.0% | |
GGCAAGTGCAATCTGAAAAA+CGG | + | chr2.2:9918075-9918094 | None:intergenic | 40.0% | |
GGTTCCCACAAATCCAATAA+TGG | - | chr2.2:9916920-9916939 | MS.gene043378:CDS | 40.0% | |
GTAACCATGACAGTTCTTTC+AGG | + | chr2.2:9917548-9917567 | None:intergenic | 40.0% | |
TACAGCAGATAAACTCGTCA+CGG | + | chr2.2:9916958-9916977 | None:intergenic | 40.0% | |
TTATCACAAGAAAAGGGGCT+AGG | + | chr2.2:9917144-9917163 | None:intergenic | 40.0% | |
! | ATTCTGGAAGAGAAACAGCT+AGG | - | chr2.2:9916795-9916814 | MS.gene043378:CDS | 40.0% |
! | CATAGATATGGTGATGCTGT+TGG | - | chr2.2:9915843-9915862 | MS.gene043378:CDS | 40.0% |
! | TCGAGTATGAGTGTTGTGTT+CGG | - | chr2.2:9916045-9916064 | MS.gene043378:intron | 40.0% |
! | TTGGATCAGCTAAAGCATCA+TGG | + | chr2.2:9917039-9917058 | None:intergenic | 40.0% |
!! | ATTCCTCTTTAGTTCTCAGG+CGG | + | chr2.2:9917006-9917025 | None:intergenic | 40.0% |
!! | CCACAAATCCAATAATGGAC+AGG | - | chr2.2:9916925-9916944 | MS.gene043378:CDS | 40.0% |
!! | GACATTCCTCTTTAGTTCTC+AGG | + | chr2.2:9917009-9917028 | None:intergenic | 40.0% |
ACTCATTCTGCAGCATGCAA+AGG | - | chr2.2:9918013-9918032 | MS.gene043378:CDS | 45.0% | |
ATCACTTGTGAATGCATCCC+TGG | - | chr2.2:9915900-9915919 | MS.gene043378:intron | 45.0% | |
TGATGCTGTTGGAAGGCTTA+GGG | - | chr2.2:9915854-9915873 | MS.gene043378:CDS | 45.0% | |
TGCACTTCTTGTGTGTGCTT+TGG | - | chr2.2:9918037-9918056 | MS.gene043378:CDS | 45.0% | |
TGGCCAGAGTTACTACAATG+TGG | + | chr2.2:9917256-9917275 | None:intergenic | 45.0% | |
TTGCACTTGCCAGACTTGTA+TGG | - | chr2.2:9918084-9918103 | MS.gene043378:CDS | 45.0% | |
! | CAGCTAAAGCATCATGGTGA+CGG | + | chr2.2:9917033-9917052 | None:intergenic | 45.0% |
! | CTAGATGTAACAAAGAGCGC+AGG | - | chr2.2:9916978-9916997 | MS.gene043378:CDS | 45.0% |
! | GATATGGTGATGCTGTTGGA+AGG | - | chr2.2:9915847-9915866 | MS.gene043378:CDS | 45.0% |
!! | AACGGGTTAGAGAGAGAAAG+TGG | - | chr2.2:9915729-9915748 | MS.gene043378:CDS | 45.0% |
!! | ACGGGTTAGAGAGAGAAAGT+GGG | - | chr2.2:9915730-9915749 | MS.gene043378:CDS | 45.0% |
AAAGGACCTTCTTCACAGCC+AGG | + | chr2.2:9915921-9915940 | None:intergenic | 50.0% | |
AAGGACCTTCTTCACAGCCA+GGG | + | chr2.2:9915920-9915939 | None:intergenic | 50.0% | |
ACAAGAAAAGGGGCTAGGCA+AGG | + | chr2.2:9917139-9917158 | None:intergenic | 50.0% | |
AGCAGATAAACTCGTCACGG+TGG | + | chr2.2:9916955-9916974 | None:intergenic | 50.0% | |
CAAGAAAAGGGGCTAGGCAA+GGG | + | chr2.2:9917138-9917157 | None:intergenic | 50.0% | |
CAGCCCTGAAAGAACTGTCA+TGG | - | chr2.2:9917541-9917560 | MS.gene043378:intron | 50.0% | |
GAATGTTTCTCGAACGCAGC+AGG | + | chr2.2:9916779-9916798 | None:intergenic | 50.0% | |
GCAGGAGTCAACTTGTCTGT+TGG | + | chr2.2:9916761-9916780 | None:intergenic | 50.0% | |
GCTGCGTTCGAGAAACATTC+TGG | - | chr2.2:9916779-9916798 | MS.gene043378:CDS | 50.0% | |
GTGATGCTGTTGGAAGGCTT+AGG | - | chr2.2:9915853-9915872 | MS.gene043378:CDS | 50.0% | |
GTTCCGCCTGAGAACTAAAG+AGG | - | chr2.2:9917000-9917019 | MS.gene043378:CDS | 50.0% | |
! | CGTGTCATTGGCACATTGGA+TGG | - | chr2.2:9916207-9916226 | MS.gene043378:intron | 50.0% |
!! | GGTAACAGTTGATGGCGAGA+AGG | - | chr2.2:9916838-9916857 | MS.gene043378:CDS | 50.0% |
GGCAGTCGCAGAGTTTACAG+AGG | - | chr2.2:9917986-9918005 | MS.gene043378:CDS | 55.0% | |
GTGGCACGCCTGTCCATTAT+TGG | + | chr2.2:9916936-9916955 | None:intergenic | 55.0% | |
TGCATCCCTGGCTGTGAAGA+AGG | - | chr2.2:9915912-9915931 | MS.gene043378:intron | 55.0% | |
! | GGCACGTGTCATTGGCACAT+TGG | - | chr2.2:9916203-9916222 | MS.gene043378:intron | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 9915723 | 9918132 | 9915723 | ID=MS.gene043378 |
chr2.2 | mRNA | 9915723 | 9918132 | 9915723 | ID=MS.gene043378.t1;Parent=MS.gene043378 |
chr2.2 | exon | 9917922 | 9918132 | 9917922 | ID=MS.gene043378.t1.exon1;Parent=MS.gene043378.t1 |
chr2.2 | CDS | 9917922 | 9918132 | 9917922 | ID=cds.MS.gene043378.t1;Parent=MS.gene043378.t1 |
chr2.2 | exon | 9916766 | 9917090 | 9916766 | ID=MS.gene043378.t1.exon2;Parent=MS.gene043378.t1 |
chr2.2 | CDS | 9916766 | 9917090 | 9916766 | ID=cds.MS.gene043378.t1;Parent=MS.gene043378.t1 |
chr2.2 | exon | 9915723 | 9915897 | 9915723 | ID=MS.gene043378.t1.exon3;Parent=MS.gene043378.t1 |
chr2.2 | CDS | 9915723 | 9915897 | 9915723 | ID=cds.MS.gene043378.t1;Parent=MS.gene043378.t1 |
Gene Sequence |
Protein sequence |