Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043600.t1 | RHN67153.1 | 83.9 | 893 | 134 | 7 | 1 | 889 | 1 | 887 | 0.00E+00 | 1309.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043600.t1 | Q9LTS7 | 34.2 | 281 | 148 | 8 | 498 | 749 | 336 | 608 | 1.3e-16 | 90.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043600.t1 | A0A396IRN9 | 83.9 | 893 | 134 | 7 | 1 | 889 | 1 | 887 | 0.0e+00 | 1309.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene043600.t1 | TF | C3H |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043600.t1 | MTR_5g096500 | 88.989 | 890 | 85 | 4 | 1 | 889 | 1 | 878 | 0.0 | 1532 |
| MS.gene043600.t1 | MTR_5g096500 | 88.876 | 890 | 85 | 5 | 1 | 889 | 1 | 877 | 0.0 | 1524 |
| MS.gene043600.t1 | MTR_3g053340 | 81.411 | 893 | 92 | 7 | 1 | 889 | 1 | 823 | 0.0 | 1411 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043600.t1 | AT5G56930 | 37.818 | 275 | 138 | 10 | 498 | 745 | 336 | 604 | 5.71e-40 | 158 |
Find 199 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCCATCTAATCTCTTTA+TGG | 0.079156 | 3.2:+45484648 | MS.gene043600:CDS |
| TTAGAAGAGGGAGAAATTTC+TGG | 0.169773 | 3.2:+45484478 | MS.gene043600:CDS |
| ACAAAACAACTCCAATTCTA+AGG | 0.230780 | 3.2:+45488497 | MS.gene043600:CDS |
| ATTACTGGATTCTACAATTA+TGG | 0.231119 | 3.2:+45484357 | MS.gene043600:CDS |
| TGCCAACATTCTTTAGGTTT+TGG | 0.254921 | 3.2:-45486237 | None:intergenic |
| AGTTTCAGAACAGATGAAAT+TGG | 0.258020 | 3.2:+45484552 | MS.gene043600:CDS |
| TTCAGTTTCATCTCTGAATA+AGG | 0.262335 | 3.2:+45488872 | MS.gene043600:CDS |
| TATTCTGTTTCTCGCAGTTC+AGG | 0.265437 | 3.2:-45483940 | None:intergenic |
| ATATAATGCCAACATTCTTT+AGG | 0.287347 | 3.2:-45486243 | None:intergenic |
| GGAGCCTTTAGACACAAAAT+TGG | 0.289293 | 3.2:-45488025 | None:intergenic |
| CGGGAACTCATCTGTATTAC+AGG | 0.293152 | 3.2:+45484756 | MS.gene043600:CDS |
| TCTTCAGAAGGTCTGGTATC+TGG | 0.304297 | 3.2:+45489155 | MS.gene043600:CDS |
| ATTTATAAATCTAATTCCTT+TGG | 0.310961 | 3.2:-45488589 | None:intergenic |
| TGTATTTCCTTCAAGGGTAT+TGG | 0.313994 | 3.2:-45483704 | None:intergenic |
| GACAGAAGATGGTGGATTAC+TGG | 0.316523 | 3.2:+45484342 | MS.gene043600:CDS |
| AGAATAAATTCCCTTAGAAT+TGG | 0.325403 | 3.2:-45488508 | None:intergenic |
| ATCAGTTCAAGAGGTAAATA+AGG | 0.326202 | 3.2:+45489061 | MS.gene043600:CDS |
| AAACCATCTGTTTGTGTAGA+TGG | 0.328437 | 3.2:-45483833 | None:intergenic |
| CGGTAGTGAAGTTGATTTGA+TGG | 0.337687 | 3.2:+45483964 | MS.gene043600:CDS |
| TGTTCTGAAGGCTGAAACTT+GGG | 0.340614 | 3.2:-45486210 | None:intergenic |
| TGATGCAGCAGAATTTCTTA+TGG | 0.341614 | 3.2:+45483799 | MS.gene043600:CDS |
| TTTACCATAAAGAGATTAGA+TGG | 0.345594 | 3.2:-45484652 | None:intergenic |
| GAGAAAGGTGGGAGAGAATA+CGG | 0.347188 | 3.2:-45482179 | None:intergenic |
| GAAAGAAAGTTAACTCCTTT+CGG | 0.349777 | 3.2:-45488744 | None:intergenic |
| TTTATAAATCTAATTCCTTT+GGG | 0.352802 | 3.2:-45488588 | None:intergenic |
| TTCTTGAGCTCATGATCATA+TGG | 0.355100 | 3.2:-45487991 | None:intergenic |
| ACAGAGATGTAGGTGTTAAA+AGG | 0.356337 | 3.2:+45486187 | MS.gene043600:CDS |
| TGGACAAGATTTCCCTTGTT+TGG | 0.360920 | 3.2:-45488657 | None:intergenic |
| CTTCAAGGGTATTGGACCCT+TGG | 0.362987 | 3.2:-45483696 | None:intergenic |
| TCATTTGGAACAGATGATAA+TGG | 0.364717 | 3.2:+45483856 | MS.gene043600:CDS |
| ACCACTTTGTTCCTTTCTGC+TGG | 0.366420 | 3.2:-45485182 | None:intergenic |
| GGAGTTAACTTTCTTTCTTT+CGG | 0.366575 | 3.2:+45488750 | MS.gene043600:CDS |
| TTCAAGGGTATTGGACCCTT+GGG | 0.374920 | 3.2:-45483695 | None:intergenic |
| ATTTCACCCTCTTGAATAGT+AGG | 0.380109 | 3.2:-45484232 | None:intergenic |
| TCTGGTTTGCAAGCATTTGT+AGG | 0.381821 | 3.2:-45488399 | None:intergenic |
| GGTGTTATTGCGTCTTGTTT+TGG | 0.391801 | 3.2:-45488636 | None:intergenic |
| AGTTGAAGCCTGAAAATTAT+CGG | 0.396775 | 3.2:-45489087 | None:intergenic |
| CATGGTTTCTCCTTTCAATA+CGG | 0.398322 | 3.2:+45484609 | MS.gene043600:CDS |
| AACTTTCTTTCTTTCGGTAA+AGG | 0.401290 | 3.2:+45488756 | MS.gene043600:CDS |
| CAACAACCCCTCAATGTTCC+TGG | 0.403791 | 3.2:+45482219 | MS.gene043600:CDS |
| CACAGTGGAACATGTGATAA+AGG | 0.405098 | 3.2:+45488678 | MS.gene043600:CDS |
| CATGTTGAACATCTGCGTTC+TGG | 0.406173 | 3.2:+45484001 | MS.gene043600:CDS |
| GGAGAAGGGTGGTGTAAGTA+TGG | 0.407920 | 3.2:-45482158 | None:intergenic |
| TTGAAGTCTCCTCTTTCGTC+TGG | 0.410007 | 3.2:+45488423 | MS.gene043600:CDS |
| AGTCTTGCACAAAGGATTCA+TGG | 0.412264 | 3.2:+45484711 | MS.gene043600:CDS |
| CAGACAACGATCTCTATAAC+AGG | 0.412380 | 3.2:-45488046 | None:intergenic |
| CTTGTCTCCAACACTTTCAA+TGG | 0.412681 | 3.2:-45483741 | None:intergenic |
| TCCTTCTTCAATCAGAATAT+CGG | 0.414405 | 3.2:-45484452 | None:intergenic |
| GACATCATGTATTTCCTTCA+AGG | 0.416233 | 3.2:-45483711 | None:intergenic |
| ACTCCTTTCGGCATGGCAGC+TGG | 0.420711 | 3.2:-45488732 | None:intergenic |
| CTCGTGGATCTTGTATGAAA+GGG | 0.422343 | 3.2:+45487959 | MS.gene043600:CDS |
| ACAACAAAAGGAAACAGAAT+TGG | 0.424477 | 3.2:+45484177 | MS.gene043600:CDS |
| ATTCTGTTTCTCGCAGTTCA+GGG | 0.426340 | 3.2:-45483939 | None:intergenic |
| TTGTTCTGAAGGCTGAAACT+TGG | 0.427028 | 3.2:-45486211 | None:intergenic |
| CAAGCGTGGTCCTGGTTCTC+AGG | 0.427999 | 3.2:+45485905 | MS.gene043600:CDS |
| ACATCTGTCTTCAGAAGGTC+TGG | 0.430319 | 3.2:+45489148 | MS.gene043600:CDS |
| AGTGGGAGCAAGCGTGGTCC+TGG | 0.433030 | 3.2:+45485897 | MS.gene043600:CDS |
| TCCGATATTCTGATTGAAGA+AGG | 0.436958 | 3.2:+45484451 | MS.gene043600:CDS |
| TTTCAAGATAATGGCAATGT+TGG | 0.440769 | 3.2:+45483602 | MS.gene043600:intron |
| GAAAGAGGAGACTTCAACTC+TGG | 0.441262 | 3.2:-45488417 | None:intergenic |
| GATGCAGCAGAATTTCTTAT+GGG | 0.447634 | 3.2:+45483800 | MS.gene043600:CDS |
| GGAAGAACAGAGTGGTCATA+AGG | 0.447947 | 3.2:+45484261 | MS.gene043600:CDS |
| CAAGGGTCCAATACCCTTGA+AGG | 0.451166 | 3.2:+45483697 | MS.gene043600:CDS |
| GAAGAAGGAGATTTAGAAGA+GGG | 0.451883 | 3.2:+45484466 | MS.gene043600:CDS |
| AAACAATGAAAGACAACAAA+AGG | 0.454560 | 3.2:+45484165 | MS.gene043600:CDS |
| AGTTGGAGCTTGTTGTGAAA+GGG | 0.455418 | 3.2:+45483882 | MS.gene043600:CDS |
| TGTGAGAATAGCGCAGTTTG+TGG | 0.460073 | 3.2:-45488936 | None:intergenic |
| GAAATTCTGCTGCATCATCT+AGG | 0.474076 | 3.2:-45483793 | None:intergenic |
| AGGACCACGCTTGCTCCCAC+TGG | 0.479874 | 3.2:-45485895 | None:intergenic |
| TCAGTCGTTCTGCCATGGAT+TGG | 0.481190 | 3.2:-45488977 | None:intergenic |
| TTGTAGGCGTAGGTATATCT+TGG | 0.482397 | 3.2:-45488383 | None:intergenic |
| ATGGTTTCTCCTTTCAATAC+GGG | 0.484259 | 3.2:+45484610 | MS.gene043600:CDS |
| ATTCCTTTGGGTGCTGAGGT+AGG | 0.484739 | 3.2:-45488576 | None:intergenic |
| GTTTCACATCTGTCTTCAGA+AGG | 0.486768 | 3.2:+45489143 | MS.gene043600:CDS |
| ATTAAACTATCATCACAAAC+AGG | 0.487070 | 3.2:-45483914 | None:intergenic |
| AGGCGTAGGTATATCTTGGC+TGG | 0.488376 | 3.2:-45488379 | None:intergenic |
| AAGTCGAATTGAGTGCCCTT+TGG | 0.490972 | 3.2:-45489205 | None:intergenic |
| CGGAGGGGAGATCGACGATA+AGG | 0.491529 | 3.2:-45482132 | None:intergenic |
| TTGCCTCAGTCAGTCAACTT+TGG | 0.493045 | 3.2:+45488837 | MS.gene043600:CDS |
| TTTGTATTTCCAGACGAAAG+AGG | 0.493585 | 3.2:-45488432 | None:intergenic |
| AGCATCAAGCTTAGGCCAAA+GGG | 0.497258 | 3.2:+45489190 | MS.gene043600:CDS |
| GAGTTGGAGCTTGTTGTGAA+AGG | 0.497925 | 3.2:+45483881 | MS.gene043600:CDS |
| GTGGGAGAGAATACGGAGAA+GGG | 0.499936 | 3.2:-45482172 | None:intergenic |
| GGAGCAAGAAAACCAGGAAA+AGG | 0.500866 | 3.2:+45483628 | MS.gene043600:CDS |
| TGATTTCAGTCGTTCTGCCA+TGG | 0.505856 | 3.2:-45488982 | None:intergenic |
| GCAGAAAAGAACAGAGATGT+AGG | 0.507911 | 3.2:+45486177 | MS.gene043600:CDS |
| GTTCCCGTGATCTTTGATAG+AGG | 0.509690 | 3.2:-45484740 | None:intergenic |
| TTGAAACGGTGGAAGGAGAA+AGG | 0.510860 | 3.2:-45482194 | None:intergenic |
| GGTGTAAGTATGGCTGCGGA+GGG | 0.514973 | 3.2:-45482148 | None:intergenic |
| AACGGTGGAAGGAGAAAGGT+GGG | 0.515537 | 3.2:-45482190 | None:intergenic |
| GCTCGTGGATCTTGTATGAA+AGG | 0.516213 | 3.2:+45487958 | MS.gene043600:CDS |
| GGTGGGAGAGAATACGGAGA+AGG | 0.518024 | 3.2:-45482173 | None:intergenic |
| CCACGAGCATAGTGAGTACA+TGG | 0.518495 | 3.2:-45487943 | None:intergenic |
| CGATAAGGAGGGAAAGGCAT+AGG | 0.518533 | 3.2:-45482117 | None:intergenic |
| AGGAGAAGAAAACTAGAAAG+AGG | 0.520032 | 3.2:+45485925 | MS.gene043600:CDS |
| TTGGATGAGATTGAGAAACC+TGG | 0.520218 | 3.2:+45484571 | MS.gene043600:CDS |
| GAGAACTCTGAGTTAAAAGT+TGG | 0.525245 | 3.2:+45483656 | MS.gene043600:CDS |
| TGGTGTAAGTATGGCTGCGG+AGG | 0.525497 | 3.2:-45482149 | None:intergenic |
| CAATATCATTCCTTCTGCAG+TGG | 0.528735 | 3.2:-45488811 | None:intergenic |
| CATTGAAAGTGTTGGAGACA+AGG | 0.530051 | 3.2:+45483742 | MS.gene043600:CDS |
| TCTTGAGCTCATGATCATAT+GGG | 0.530121 | 3.2:-45487990 | None:intergenic |
| ATTAGATGGAAAGCTTTGAA+AGG | 0.531837 | 3.2:-45484638 | None:intergenic |
| TGGGAGTTCATTTGAAAACA+TGG | 0.532005 | 3.2:+45484591 | MS.gene043600:CDS |
| ACAGATGATAATGGACGAGT+TGG | 0.532127 | 3.2:+45483865 | MS.gene043600:CDS |
| GAGGTGCAGTCGCAAGTACA+AGG | 0.532562 | 3.2:+45484049 | MS.gene043600:CDS |
| AGTTTGTCCCTTTGTTGACT+CGG | 0.537842 | 3.2:-45484110 | None:intergenic |
| AGTACACCACTGAGTAATCA+TGG | 0.539481 | 3.2:+45488459 | MS.gene043600:CDS |
| GAAGACAGATGTGAAACAAA+GGG | 0.540909 | 3.2:-45489137 | None:intergenic |
| AACCAAAACCTAAAGAATGT+TGG | 0.542169 | 3.2:+45486235 | MS.gene043600:CDS |
| TTCTGTTTCTCGCAGTTCAG+GGG | 0.542275 | 3.2:-45483938 | None:intergenic |
| CATAAACAAGCATCAAGCTT+AGG | 0.542389 | 3.2:+45489182 | MS.gene043600:CDS |
| TGCTGATGTCAAGGATCCCA+AGG | 0.542510 | 3.2:+45483679 | MS.gene043600:CDS |
| CACGAGACCATTGAAAGTGT+TGG | 0.543655 | 3.2:+45483734 | MS.gene043600:CDS |
| TGAAGAAGGAGATTTAGAAG+AGG | 0.545846 | 3.2:+45484465 | MS.gene043600:CDS |
| GATAAGGAGGGAAAGGCATA+GGG | 0.548371 | 3.2:-45482116 | None:intergenic |
| AGGGGAGATCGACGATAAGG+AGG | 0.548920 | 3.2:-45482129 | None:intergenic |
| TGTTGAGTTGAAACGGTGGA+AGG | 0.549014 | 3.2:-45482201 | None:intergenic |
| CCTCTTGAACTGATTTACAA+TGG | 0.553818 | 3.2:-45489052 | None:intergenic |
| AGATAATGGCAATGTTGGAA+TGG | 0.553834 | 3.2:+45483607 | MS.gene043600:intron |
| CAACACTTTCAATGGTCTCG+TGG | 0.554024 | 3.2:-45483733 | None:intergenic |
| GGATTTGAGTGCCAATGCTA+TGG | 0.554777 | 3.2:+45483769 | MS.gene043600:CDS |
| GAATGTTGGCATTATATGAA+AGG | 0.554942 | 3.2:+45486249 | MS.gene043600:CDS |
| GAATGTACCAGGAACATTGA+GGG | 0.555122 | 3.2:-45482226 | None:intergenic |
| GATGCCAGTGGGAGCAAGCG+TGG | 0.557169 | 3.2:+45485891 | MS.gene043600:CDS |
| GAGGGGTTGTTGAGTTGAAA+CGG | 0.557333 | 3.2:-45482208 | None:intergenic |
| AAAAGTTGGTGCTGATGTCA+AGG | 0.557812 | 3.2:+45483670 | MS.gene043600:CDS |
| AATACCATGGACTTAGTTGA+AGG | 0.559174 | 3.2:-45487430 | None:intergenic |
| AAGCATCAAGCTTAGGCCAA+AGG | 0.562386 | 3.2:+45489189 | MS.gene043600:CDS |
| GGGGAGATCGACGATAAGGA+GGG | 0.563067 | 3.2:-45482128 | None:intergenic |
| GAAACCTCTATCAAAGATCA+CGG | 0.564467 | 3.2:+45484736 | MS.gene043600:CDS |
| CCATGTACTCACTATGCTCG+TGG | 0.565003 | 3.2:+45487943 | MS.gene043600:CDS |
| GGAGAGAATACGGAGAAGGG+TGG | 0.566031 | 3.2:-45482169 | None:intergenic |
| TCTAATTCCTTTGGGTGCTG+AGG | 0.566303 | 3.2:-45488580 | None:intergenic |
| ACATCATGTATTTCCTTCAA+GGG | 0.566355 | 3.2:-45483710 | None:intergenic |
| GGAAACAGAATTGGTAACAC+TGG | 0.567719 | 3.2:+45484186 | MS.gene043600:CDS |
| GAGTGTTGATGCCAGCAGAA+AGG | 0.567766 | 3.2:+45485171 | MS.gene043600:CDS |
| CAAAACAACTCCAATTCTAA+GGG | 0.568138 | 3.2:+45488498 | MS.gene043600:CDS |
| ATCTCTTCCTACTATTCAAG+AGG | 0.569190 | 3.2:+45484225 | MS.gene043600:CDS |
| TCTCTGAATAAGGATGATCA+TGG | 0.569623 | 3.2:+45488882 | MS.gene043600:CDS |
| AAACGGTGGAAGGAGAAAGG+TGG | 0.570037 | 3.2:-45482191 | None:intergenic |
| TCACACAAATGTAAAACGTA+AGG | 0.571093 | 3.2:+45488530 | MS.gene043600:CDS |
| AGACGCAATAACACCAAACA+AGG | 0.571966 | 3.2:+45488644 | MS.gene043600:CDS |
| TTGCAAGCATTTGTAGGCGT+AGG | 0.572990 | 3.2:-45488393 | None:intergenic |
| ACTAGCAAGAAGCGTAGCTG+AGG | 0.573123 | 3.2:-45489114 | None:intergenic |
| CATGTGTCCGAGTCAACAAA+GGG | 0.577612 | 3.2:+45484103 | MS.gene043600:CDS |
| ATCATCTAGGACCATAGCAT+TGG | 0.578913 | 3.2:-45483780 | None:intergenic |
| CAGCAGATGGTTGATGCCAG+TGG | 0.579030 | 3.2:+45485879 | MS.gene043600:intron |
| GTAGGAAGAGATTCCGCTAG+AGG | 0.579915 | 3.2:-45484214 | None:intergenic |
| GATCGACGATAAGGAGGGAA+AGG | 0.580502 | 3.2:-45482123 | None:intergenic |
| CTTAATCAACTTGACTCGGA+AGG | 0.583971 | 3.2:+45484076 | MS.gene043600:CDS |
| AGAATGTACCAGGAACATTG+AGG | 0.584465 | 3.2:-45482227 | None:intergenic |
| ATTCCAGCTGCCATGCCGAA+AGG | 0.584561 | 3.2:+45488729 | MS.gene043600:CDS |
| TGAAGACAGATGTGAAACAA+AGG | 0.585226 | 3.2:-45489138 | None:intergenic |
| TGGAATGGAGCAAGAAAACC+AGG | 0.585974 | 3.2:+45483622 | MS.gene043600:CDS |
| TCTATACAATCCACTGCAGA+AGG | 0.590147 | 3.2:+45488801 | MS.gene043600:CDS |
| CCATTGTAAATCAGTTCAAG+AGG | 0.590364 | 3.2:+45489052 | MS.gene043600:CDS |
| CCACTGAGTAATCATGGCAC+TGG | 0.591700 | 3.2:+45488465 | MS.gene043600:CDS |
| TATTCCTTCAACTAAGTCCA+TGG | 0.592601 | 3.2:+45487426 | MS.gene043600:CDS |
| TCTGTTTCTCGCAGTTCAGG+GGG | 0.593070 | 3.2:-45483937 | None:intergenic |
| AAGGAGATACCCGTATTGAA+AGG | 0.593675 | 3.2:-45484619 | None:intergenic |
| TGGATGAGATTGAGAAACCT+GGG | 0.594145 | 3.2:+45484572 | MS.gene043600:CDS |
| GGAGAAGAAAACTAGAAAGA+GGG | 0.596213 | 3.2:+45485926 | MS.gene043600:CDS |
| GCATTGAATATGACAGAAGA+TGG | 0.598965 | 3.2:+45484331 | MS.gene043600:CDS |
| GGGTGGTGTAAGTATGGCTG+CGG | 0.599371 | 3.2:-45482152 | None:intergenic |
| TCAAGAGGGTGAAATTGAGA+AGG | 0.606957 | 3.2:+45484240 | MS.gene043600:CDS |
| ATTGAAAGTGTTGGAGACAA+GGG | 0.607556 | 3.2:+45483743 | MS.gene043600:CDS |
| TCATGTGTCCGAGTCAACAA+AGG | 0.608096 | 3.2:+45484102 | MS.gene043600:CDS |
| AAAGTTAACTCCTTTCGGCA+TGG | 0.609550 | 3.2:-45488739 | None:intergenic |
| AGAGCTTAATCAACTTGACT+CGG | 0.611851 | 3.2:+45484072 | MS.gene043600:CDS |
| AACACTGGTTTGTCCTCTAG+CGG | 0.616020 | 3.2:+45484201 | MS.gene043600:CDS |
| TTCAGCTGATGATTCTGTGA+GGG | 0.619873 | 3.2:+45489022 | MS.gene043600:CDS |
| AAACCTCTATCAAAGATCAC+GGG | 0.622912 | 3.2:+45484737 | MS.gene043600:CDS |
| AAACCAAAGTTGACTGACTG+AGG | 0.623212 | 3.2:-45488840 | None:intergenic |
| GTTGGAGCTTGTTGTGAAAG+GGG | 0.628380 | 3.2:+45483883 | MS.gene043600:CDS |
| CACATTTGATGTGTCTTCTG+CGG | 0.633235 | 3.2:+45484522 | MS.gene043600:CDS |
| CACGTCTGAACGTGTAAGTG+AGG | 0.635643 | 3.2:+45484030 | MS.gene043600:CDS |
| GAACCATCTACACAAACAGA+TGG | 0.637190 | 3.2:+45483830 | MS.gene043600:CDS |
| ACTTGATGTACTACTAATCA+CGG | 0.640241 | 3.2:-45484140 | None:intergenic |
| TTGAATATGACAGAAGATGG+TGG | 0.642220 | 3.2:+45484334 | MS.gene043600:CDS |
| AAGTGTTGGAGACAAGGGCA+AGG | 0.644118 | 3.2:+45483748 | MS.gene043600:CDS |
| AGCAGATGGTTGATGCCAGT+GGG | 0.654439 | 3.2:+45485880 | MS.gene043600:intron |
| AATGTACCAGGAACATTGAG+GGG | 0.656974 | 3.2:-45482225 | None:intergenic |
| GATGTTCAACATGTTCTACT+CGG | 0.659808 | 3.2:-45483991 | None:intergenic |
| AAGCCTACCTCAGCACCCAA+AGG | 0.664036 | 3.2:+45488573 | MS.gene043600:CDS |
| TTAGACACAAAATTGGAACA+AGG | 0.673175 | 3.2:-45488018 | None:intergenic |
| TCTCTTCCTACTATTCAAGA+GGG | 0.675040 | 3.2:+45484226 | MS.gene043600:CDS |
| GTGTAAGTATGGCTGCGGAG+GGG | 0.676588 | 3.2:-45482147 | None:intergenic |
| GCTGATGTCAAGGATCCCAA+GGG | 0.678207 | 3.2:+45483680 | MS.gene043600:CDS |
| GGGTTGTTGAGTTGAAACGG+TGG | 0.681204 | 3.2:-45482205 | None:intergenic |
| GCCAGCAGAAAGGAACAAAG+TGG | 0.681605 | 3.2:+45485181 | MS.gene043600:CDS |
| GACGCAATAACACCAAACAA+GGG | 0.689169 | 3.2:+45488645 | MS.gene043600:CDS |
| ATTCAGCTGATGATTCTGTG+AGG | 0.697116 | 3.2:+45489021 | MS.gene043600:CDS |
| TCGTGGATCTTGTATGAAAG+GGG | 0.700049 | 3.2:+45487960 | MS.gene043600:CDS |
| CTTTATCACATGTTCCACTG+TGG | 0.705407 | 3.2:-45488677 | None:intergenic |
| TATGAAAGGAAGATGCCATG+AGG | 0.725457 | 3.2:+45486263 | MS.gene043600:CDS |
| ATTGAGAAGGAAGAACAGAG+TGG | 0.726299 | 3.2:+45484253 | MS.gene043600:CDS |
| AACTGCGAGAAACAGAATAG+CGG | 0.734818 | 3.2:+45483944 | MS.gene043600:CDS |
| AAGGGAAATCTTGTCCACAG+TGG | 0.738177 | 3.2:+45488663 | MS.gene043600:CDS |
| CCAGTGCCATGATTACTCAG+TGG | 0.738209 | 3.2:-45488465 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 45482090 | 45489271 | 45482090 | ID=MS.gene043600 |
| chr3.2 | mRNA | 45482090 | 45489271 | 45482090 | ID=MS.gene043600.t1;Parent=MS.gene043600 |
| chr3.2 | exon | 45482090 | 45482240 | 45482090 | ID=MS.gene043600.t1.exon1;Parent=MS.gene043600.t1 |
| chr3.2 | CDS | 45482090 | 45482240 | 45482090 | ID=cds.MS.gene043600.t1;Parent=MS.gene043600.t1 |
| chr3.2 | exon | 45483609 | 45484777 | 45483609 | ID=MS.gene043600.t1.exon2;Parent=MS.gene043600.t1 |
| chr3.2 | CDS | 45483609 | 45484777 | 45483609 | ID=cds.MS.gene043600.t1;Parent=MS.gene043600.t1 |
| chr3.2 | exon | 45485169 | 45485234 | 45485169 | ID=MS.gene043600.t1.exon3;Parent=MS.gene043600.t1 |
| chr3.2 | CDS | 45485169 | 45485234 | 45485169 | ID=cds.MS.gene043600.t1;Parent=MS.gene043600.t1 |
| chr3.2 | exon | 45485882 | 45485947 | 45485882 | ID=MS.gene043600.t1.exon4;Parent=MS.gene043600.t1 |
| chr3.2 | CDS | 45485882 | 45485947 | 45485882 | ID=cds.MS.gene043600.t1;Parent=MS.gene043600.t1 |
| chr3.2 | exon | 45486156 | 45486284 | 45486156 | ID=MS.gene043600.t1.exon5;Parent=MS.gene043600.t1 |
| chr3.2 | CDS | 45486156 | 45486284 | 45486156 | ID=cds.MS.gene043600.t1;Parent=MS.gene043600.t1 |
| chr3.2 | exon | 45487397 | 45487447 | 45487397 | ID=MS.gene043600.t1.exon6;Parent=MS.gene043600.t1 |
| chr3.2 | CDS | 45487397 | 45487447 | 45487397 | ID=cds.MS.gene043600.t1;Parent=MS.gene043600.t1 |
| chr3.2 | exon | 45487943 | 45488080 | 45487943 | ID=MS.gene043600.t1.exon7;Parent=MS.gene043600.t1 |
| chr3.2 | CDS | 45487943 | 45488080 | 45487943 | ID=cds.MS.gene043600.t1;Parent=MS.gene043600.t1 |
| chr3.2 | exon | 45488372 | 45489271 | 45488372 | ID=MS.gene043600.t1.exon8;Parent=MS.gene043600.t1 |
| chr3.2 | CDS | 45488372 | 45489271 | 45488372 | ID=cds.MS.gene043600.t1;Parent=MS.gene043600.t1 |
| Gene Sequence |
| Protein sequence |
