AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene043601

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene043601.t1 MTR_3g053330 91.364 440 27 3 1 437 37 468 0.0 791
MS.gene043601.t1 MTR_2g023930 43.579 475 192 12 3 413 67 529 1.40e-94 295
MS.gene043601.t1 MTR_2g088000 42.919 459 182 16 18 413 114 555 7.50e-90 285
MS.gene043601.t1 MTR_4g132430 39.207 454 197 11 1 402 33 459 6.50e-88 276
MS.gene043601.t1 MTR_4g132430 49.286 280 114 4 151 402 46 325 3.41e-79 249
MS.gene043601.t1 MTR_7g110720 38.118 425 198 13 10 428 55 420 2.88e-70 229
MS.gene043601.t1 MTR_7g110720 54.148 229 92 7 206 428 172 393 1.64e-67 221
MS.gene043601.t1 MTR_4g049760 40.000 340 179 7 51 370 100 434 1.91e-67 224
MS.gene043601.t1 MTR_4g049790 37.965 403 200 13 57 422 131 520 6.63e-65 218
MS.gene043601.t1 MTR_4g047580 33.673 490 224 16 3 416 30 494 4.97e-62 210
MS.gene043601.t1 MTR_2g045360 46.552 232 110 5 197 417 185 413 2.30e-58 197
MS.gene043601.t1 MTR_7g009730 34.663 326 163 8 64 345 47 366 1.34e-43 161
MS.gene043601.t1 MTR_4g094412 39.313 262 116 7 207 428 218 476 6.86e-43 157
MS.gene043601.t1 MTR_4g094412 39.313 262 116 7 207 428 227 485 7.12e-43 157
MS.gene043601.t1 MTR_4g107970 69.767 86 26 0 198 283 153 238 3.19e-39 148
MS.gene043601.t1 MTR_4g107970 36.100 241 133 4 63 283 76 315 7.77e-39 148
MS.gene043601.t1 MTR_5g044695 72.308 65 18 0 187 251 41 105 3.22e-29 110
MS.gene043601.t1 MTR_4g007060 34.434 212 98 7 206 416 111 282 1.40e-28 114
MS.gene043601.t1 MTR_4g007060 34.951 206 93 7 206 410 145 310 1.86e-28 114
MS.gene043601.t1 MTR_6g038890 72.308 65 18 0 186 250 151 215 6.11e-28 110
MS.gene043601.t1 MTR_1g013790 47.368 95 48 1 207 299 83 177 1.18e-25 105
MS.gene043601.t1 MTR_3g106060 26.065 399 187 13 23 419 1 293 1.74e-25 105
MS.gene043601.t1 MTR_1g013760 33.491 212 85 7 208 418 125 281 2.32e-24 102
MS.gene043601.t1 MTR_5g094430 52.564 78 36 1 206 283 235 311 6.17e-24 103
MS.gene043601.t1 MTR_5g094430 52.564 78 36 1 206 283 213 289 6.97e-24 103
MS.gene043601.t1 MTR_5g074400 47.191 89 46 1 195 283 392 479 7.30e-24 104
MS.gene043601.t1 MTR_5g074400 50.000 60 28 2 224 283 244 301 7.56e-12 67.8
MS.gene043601.t1 MTR_5g094430 52.564 78 36 1 206 283 347 423 1.32e-23 103
MS.gene043601.t1 MTR_3g056100 52.564 78 36 1 206 283 241 317 1.39e-23 102
MS.gene043601.t1 MTR_3g056100 52.564 78 36 1 206 283 254 330 1.46e-23 102
MS.gene043601.t1 MTR_3g056100 52.564 78 36 1 206 283 398 474 1.47e-23 103
MS.gene043601.t1 MTR_3g056100 52.564 78 36 1 206 283 385 461 1.57e-23 103
MS.gene043601.t1 MTR_4g013260 52.564 78 36 1 206 283 319 395 2.38e-23 102
MS.gene043601.t1 MTR_4g013260 35.955 89 56 1 204 292 165 252 5.76e-13 70.9
MS.gene043601.t1 MTR_5g097490 45.833 96 50 2 198 293 227 320 3.57e-23 100
MS.gene043601.t1 MTR_5g097490 41.975 81 44 3 221 301 90 167 7.71e-11 63.9
MS.gene043601.t1 MTR_3g031220 44.944 89 48 1 195 283 337 424 5.97e-23 101
MS.gene043601.t1 MTR_3g031220 48.333 60 29 2 224 283 199 256 1.02e-11 67.0
MS.gene043601.t1 MTR_7g011820 44.330 97 53 1 202 298 389 484 7.99e-23 101
MS.gene043601.t1 MTR_7g011820 53.333 60 26 2 224 283 229 286 3.80e-13 71.6
MS.gene043601.t1 MTR_3g009470 52.564 78 36 1 206 283 478 554 1.09e-22 101
MS.gene043601.t1 MTR_3g009470 42.683 82 44 3 224 304 281 360 7.50e-14 73.9
MS.gene043601.t1 MTR_7g071120 44.554 101 50 2 188 283 284 383 1.78e-22 100
MS.gene043601.t1 MTR_7g071120 41.333 75 42 2 224 298 167 239 8.61e-11 64.3
MS.gene043601.t1 MTR_5g042920 46.739 92 47 2 201 292 298 387 1.98e-22 99.4
MS.gene043601.t1 MTR_5g042920 47.222 72 36 2 224 295 152 221 3.10e-13 71.6
MS.gene043601.t1 MTR_2g105060 29.630 216 99 5 200 410 67 234 4.30e-22 95.1
MS.gene043601.t1 MTR_2g033820 48.148 81 41 1 207 287 187 266 6.14e-22 97.4
MS.gene043601.t1 MTR_4g094588 43.956 91 50 1 210 300 165 254 7.72e-22 96.3
MS.gene043601.t1 MTR_2g105060 29.630 216 99 5 200 410 142 309 8.47e-22 95.9
MS.gene043601.t1 MTR_4g082580 45.631 103 52 3 202 302 257 357 8.47e-22 97.1
MS.gene043601.t1 MTR_4g082580 42.500 80 43 2 224 303 146 222 3.06e-11 65.1
MS.gene043601.t1 MTR_3g104750 43.182 88 49 1 193 280 74 160 2.06e-21 90.9
MS.gene043601.t1 MTR_7g109800 42.857 98 51 2 207 304 129 221 3.67e-21 93.6
MS.gene043601.t1 MTR_7g080020 48.718 78 39 1 206 283 476 552 4.10e-21 96.7
MS.gene043601.t1 MTR_7g080020 46.875 64 32 2 224 287 281 342 5.70e-12 68.2
MS.gene043601.t1 MTR_7g079010 50.575 87 39 2 207 293 125 207 5.57e-21 91.3
MS.gene043601.t1 MTR_5g091390 49.383 81 40 1 210 290 144 223 5.65e-21 93.2
MS.gene043601.t1 MTR_7g080000 48.718 78 39 1 206 283 415 491 6.47e-21 95.9
MS.gene043601.t1 MTR_7g080000 44.928 69 36 2 219 287 230 296 3.07e-12 68.9
MS.gene043601.t1 MTR_5g043880 46.914 81 42 1 200 280 101 180 2.34e-20 90.9
MS.gene043601.t1 MTR_7g028415 50.667 75 36 1 212 286 82 155 2.61e-20 88.2
MS.gene043601.t1 MTR_7g028710 50.667 75 36 1 212 286 82 155 2.61e-20 88.2
MS.gene043601.t1 MTR_4g122530 48.052 77 39 1 207 283 192 267 2.64e-20 92.8
MS.gene043601.t1 MTR_1g086790 46.341 82 43 1 207 288 142 222 5.22e-20 90.9
MS.gene043601.t1 MTR_8g096730 42.857 84 47 1 206 289 53 135 6.21e-20 86.3
MS.gene043601.t1 MTR_1g015140 49.315 73 36 1 208 280 87 158 6.51e-20 86.7
MS.gene043601.t1 MTR_7g100510 46.988 83 43 1 201 283 339 420 6.78e-20 92.0
MS.gene043601.t1 MTR_7g100510 44.000 75 40 2 224 298 190 262 6.92e-13 70.5
MS.gene043601.t1 MTR_3g095040 50.000 74 36 1 210 283 105 177 5.03e-19 85.5
MS.gene043601.t1 MTR_8g087000 53.521 71 32 1 214 283 67 137 7.29e-19 85.9
MS.gene043601.t1 MTR_2g016770 58.065 62 26 0 223 284 35 96 7.84e-19 85.1
MS.gene043601.t1 MTR_8g087000 46.739 92 42 2 214 304 66 151 8.12e-19 85.9
MS.gene043601.t1 MTR_2g024350 41.975 81 47 0 218 298 3 83 8.35e-19 85.5
MS.gene043601.t1 MTR_2g016770 58.065 62 26 0 223 284 27 88 9.62e-19 84.7
MS.gene043601.t1 MTR_4g094908 50.000 74 37 0 209 282 252 325 1.21e-18 87.0
MS.gene043601.t1 MTR_8g092010 44.156 77 42 1 210 286 95 170 1.23e-18 84.0
MS.gene043601.t1 MTR_1g070455 52.239 67 32 0 219 285 289 355 1.42e-18 87.0
MS.gene043601.t1 MTR_5g016610 50.000 74 37 0 209 282 185 258 1.74e-18 85.5
MS.gene043601.t1 MTR_8g007270 46.053 76 40 1 206 281 137 211 1.87e-18 84.3
MS.gene043601.t1 MTR_4g130900 48.052 77 39 1 207 283 343 418 2.19e-18 87.8
MS.gene043601.t1 MTR_2g083870 51.429 70 34 0 214 283 71 140 2.32e-18 84.7
MS.gene043601.t1 MTR_7g109600 42.424 99 47 2 205 297 29 123 2.67e-18 84.7
MS.gene043601.t1 MTR_2g032030 39.091 110 66 1 190 298 233 342 3.20e-18 87.0
MS.gene043601.t1 MTR_3g095080 44.737 76 41 1 206 281 151 225 5.44e-18 83.6
MS.gene043601.t1 MTR_3g095080 44.737 76 41 1 206 281 127 201 6.09e-18 82.8
MS.gene043601.t1 MTR_2g032030 39.091 110 66 1 190 298 233 342 6.21e-18 85.9
MS.gene043601.t1 MTR_2g024380 43.210 81 46 0 218 298 246 326 6.77e-18 85.9
MS.gene043601.t1 MTR_1g009613 43.421 76 43 0 207 282 246 321 7.20e-18 84.7
MS.gene043601.t1 MTR_4g127040 47.500 80 41 1 203 281 224 303 1.02e-17 84.0
MS.gene043601.t1 MTR_1g077780 35.922 103 62 2 207 309 46 144 1.99e-17 79.3
MS.gene043601.t1 MTR_0117s0040 40.860 93 49 1 210 302 61 147 7.11e-17 80.1
MS.gene043601.t1 MTR_1g099600 41.489 94 53 1 220 313 182 273 7.17e-17 81.6
MS.gene043601.t1 MTR_8g092140 44.156 77 41 2 206 281 142 217 2.07e-16 78.6
MS.gene043601.t1 MTR_8g028565 45.946 74 40 0 220 293 152 225 3.24e-16 79.7
MS.gene043601.t1 MTR_3g108960 44.595 74 41 0 207 280 298 371 3.70e-16 80.5
MS.gene043601.t1 MTR_6g086555 46.512 86 43 3 204 287 186 270 9.38e-16 79.3
MS.gene043601.t1 MTR_7g079040 39.362 94 50 1 220 313 151 237 2.40e-15 77.0
MS.gene043601.t1 MTR_8g098945 43.056 72 41 0 222 293 128 199 6.56e-15 75.1
MS.gene043601.t1 MTR_7g062220 30.263 152 95 3 224 368 125 272 9.98e-15 75.1
MS.gene043601.t1 MTR_3g009470 42.683 82 44 3 224 304 281 360 3.85e-14 74.7
MS.gene043601.t1 MTR_4g007060 39.683 63 38 0 198 260 137 199 1.77e-13 70.1
MS.gene043601.t1 MTR_1g078260 42.466 73 40 2 210 281 234 305 2.64e-13 72.0
MS.gene043601.t1 MTR_8g069935 32.653 98 54 1 207 292 303 400 1.13e-12 70.1
MS.gene043601.t1 MTR_8g067650 29.221 154 96 4 135 283 254 399 1.89e-12 69.3
MS.gene043601.t1 MTR_3g031220 48.333 60 29 2 224 283 199 256 4.96e-12 67.8
MS.gene043601.t1 MTR_8g027860 45.205 73 33 2 222 287 135 207 7.92e-12 66.6
MS.gene043601.t1 MTR_5g067680 50.877 57 26 1 224 278 203 259 9.05e-12 66.6
MS.gene043601.t1 MTR_7g073430 43.210 81 44 1 224 302 123 203 9.66e-12 65.9
MS.gene043601.t1 MTR_8g067635 40.000 75 44 1 210 283 335 409 2.53e-11 65.9
MS.gene043601.t1 MTR_7g073380 36.364 99 60 2 207 302 106 204 2.82e-11 64.7
MS.gene043601.t1 MTR_8g099350 35.593 118 58 5 185 284 83 200 2.99e-11 65.1
MS.gene043601.t1 MTR_5g097500 34.783 92 57 3 213 303 220 309 8.14e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene043601.t1 AT4G04450 41.591 440 191 13 27 413 77 503 8.77e-92 287
MS.gene043601.t1 AT4G04450 43.641 401 185 10 51 413 12 409 7.20e-91 282
MS.gene043601.t1 AT1G62300 39.746 473 220 13 3 423 89 548 3.03e-88 279
MS.gene043601.t1 AT4G22070 43.291 395 170 12 1 345 30 420 5.08e-73 239
MS.gene043601.t1 AT4G22070 43.291 395 170 12 1 345 30 420 5.08e-73 239
MS.gene043601.t1 AT4G22070 43.291 395 170 12 1 345 30 420 5.08e-73 239
MS.gene043601.t1 AT4G22070 43.291 395 170 12 1 345 30 420 5.08e-73 239
MS.gene043601.t1 AT4G01720 47.431 253 101 5 185 410 196 443 3.77e-54 188
MS.gene043601.t1 AT1G68150 40.078 257 124 8 64 319 100 327 1.77e-44 159
MS.gene043601.t1 AT5G15130 36.131 274 135 7 57 297 35 301 1.53e-43 160
MS.gene043601.t1 AT5G15130 36.466 266 129 7 65 297 1 259 5.32e-43 158
MS.gene043601.t1 AT1G18860 50.794 189 72 6 203 382 219 395 1.60e-41 154
MS.gene043601.t1 AT1G69810 33.871 310 185 7 50 345 18 321 3.42e-37 140
MS.gene043601.t1 AT1G69810 45.882 170 86 3 177 345 99 263 1.48e-34 131
MS.gene043601.t1 AT1G80840 30.877 285 140 9 140 410 50 291 2.06e-29 117
MS.gene043601.t1 AT4G31800 30.579 242 125 6 64 301 52 254 2.00e-25 105
MS.gene043601.t1 AT1G13960 43.220 118 56 2 166 283 209 315 1.14e-24 104
MS.gene043601.t1 AT1G13960 53.333 60 26 2 224 283 77 134 5.43e-13 70.5
MS.gene043601.t1 AT1G13960 43.220 118 56 2 166 283 362 468 1.30e-24 106
MS.gene043601.t1 AT1G13960 53.333 60 26 2 224 283 230 287 3.41e-13 71.6
MS.gene043601.t1 AT4G31800 41.905 105 61 0 197 301 85 189 3.26e-24 101
MS.gene043601.t1 AT2G38470 38.636 132 66 4 206 337 345 461 7.78e-24 104
MS.gene043601.t1 AT2G38470 45.205 73 37 3 211 283 173 242 7.23e-12 67.8
MS.gene043601.t1 AT1G29860 39.706 136 71 4 207 332 120 254 8.95e-24 100
MS.gene043601.t1 AT4G26640 51.282 78 37 1 206 283 188 264 2.70e-23 101
MS.gene043601.t1 AT4G26640 51.282 78 37 1 206 283 188 264 2.70e-23 101
MS.gene043601.t1 AT4G26640 51.282 78 37 1 206 283 188 264 2.70e-23 101
MS.gene043601.t1 AT4G26640 51.282 78 37 1 206 283 188 264 2.70e-23 101
MS.gene043601.t1 AT5G07100 45.361 97 47 2 203 294 121 216 2.99e-23 97.8
MS.gene043601.t1 AT5G07100 45.361 97 47 2 203 294 121 216 2.99e-23 97.8
MS.gene043601.t1 AT5G07100 45.361 97 47 2 203 294 121 216 2.99e-23 97.8
MS.gene043601.t1 AT5G07100 45.361 97 47 2 203 294 121 216 2.99e-23 97.8
MS.gene043601.t1 AT5G07100 45.361 97 47 2 203 294 214 309 4.58e-23 99.4
MS.gene043601.t1 AT4G26640 51.282 78 37 1 206 283 324 400 4.63e-23 102
MS.gene043601.t1 AT5G46350 42.969 128 61 4 196 313 147 272 5.17e-23 99.8
MS.gene043601.t1 AT4G26640 51.282 78 37 1 206 283 292 368 5.27e-23 101
MS.gene043601.t1 AT4G26640 51.282 78 37 1 206 283 364 440 6.40e-23 101
MS.gene043601.t1 AT2G03340 50.602 83 40 1 201 283 393 474 1.52e-22 100
MS.gene043601.t1 AT2G03340 56.667 60 24 2 224 283 251 308 1.58e-14 75.9
MS.gene043601.t1 AT2G25000 61.290 62 24 0 222 283 102 163 1.65e-22 95.9
MS.gene043601.t1 AT2G25000 61.290 62 24 0 222 283 102 163 1.65e-22 95.9
MS.gene043601.t1 AT2G25000 61.290 62 24 0 222 283 124 185 2.43e-22 95.9
MS.gene043601.t1 AT3G01970 42.991 107 47 2 189 282 18 123 2.68e-22 93.2
MS.gene043601.t1 AT2G46130 44.211 95 52 1 196 290 3 96 2.68e-22 91.7
MS.gene043601.t1 AT5G26170 50.685 73 35 1 209 281 99 170 2.94e-22 93.6
MS.gene043601.t1 AT2G25000 61.290 62 24 0 222 283 145 206 3.02e-22 96.3
MS.gene043601.t1 AT5G56270 49.398 83 41 1 201 283 465 546 3.67e-22 99.8
MS.gene043601.t1 AT5G56270 49.180 61 29 2 224 284 274 332 6.82e-12 68.2
MS.gene043601.t1 AT5G41570 52.941 85 36 2 207 291 82 162 4.74e-22 93.2
MS.gene043601.t1 AT2G47260 45.545 101 50 2 207 303 158 257 5.02e-22 97.1
MS.gene043601.t1 AT4G18170 44.231 104 47 2 190 283 129 231 6.15e-22 96.3
MS.gene043601.t1 AT2G04880 48.684 76 38 1 209 284 269 343 8.69e-22 97.8
MS.gene043601.t1 AT2G04880 42.500 80 37 3 211 283 92 169 1.06e-11 67.0
MS.gene043601.t1 AT2G04880 48.684 76 38 1 209 284 293 367 9.25e-22 97.8
MS.gene043601.t1 AT2G04880 42.500 80 37 3 211 283 92 169 1.20e-11 67.0
MS.gene043601.t1 AT1G64000 51.852 81 38 1 210 290 101 180 2.03e-21 92.0
MS.gene043601.t1 AT2G30250 51.282 78 37 1 206 283 311 387 2.74e-21 95.5
MS.gene043601.t1 AT3G01080 48.718 78 39 1 206 283 327 403 2.99e-21 96.3
MS.gene043601.t1 AT3G01080 50.000 60 28 2 224 283 206 263 1.65e-11 66.2
MS.gene043601.t1 AT3G01080 48.718 78 39 1 206 283 289 365 3.09e-21 95.9
MS.gene043601.t1 AT3G01080 50.000 60 28 2 224 283 168 225 1.66e-11 66.2
MS.gene043601.t1 AT5G49520 44.944 89 48 1 207 295 205 292 3.25e-21 95.5
MS.gene043601.t1 AT1G69310 44.444 81 44 1 200 280 124 203 3.28e-20 90.9
MS.gene043601.t1 AT1G69310 44.444 81 44 1 200 280 124 203 3.28e-20 90.9
MS.gene043601.t1 AT1G69310 44.444 81 44 1 200 280 124 203 3.28e-20 90.9
MS.gene043601.t1 AT5G13080 47.059 85 44 1 210 294 54 137 3.82e-20 87.0
MS.gene043601.t1 AT3G62340 53.247 77 35 1 207 283 102 177 2.11e-19 88.2
MS.gene043601.t1 AT4G30935 49.351 77 38 1 207 283 315 390 2.87e-19 90.1
MS.gene043601.t1 AT1G55600 47.436 78 40 1 207 284 291 367 5.03e-19 89.7
MS.gene043601.t1 AT4G26440 40.594 101 57 2 207 307 356 453 8.26e-19 89.4
MS.gene043601.t1 AT1G29280 37.391 115 57 1 189 288 25 139 9.13e-19 86.3
MS.gene043601.t1 AT2G23320 57.627 59 25 0 224 282 241 299 1.08e-18 87.0
MS.gene043601.t1 AT4G24240 48.148 81 41 1 203 282 260 340 2.05e-18 86.7
MS.gene043601.t1 AT5G28650 44.565 92 45 2 196 281 229 320 2.10e-18 86.3
MS.gene043601.t1 AT2G37260 43.158 95 44 3 198 289 250 337 2.47e-18 86.3
MS.gene043601.t1 AT2G37260 46.667 75 36 3 224 296 86 158 1.34e-14 75.1
MS.gene043601.t1 AT2G37260 43.158 95 44 3 198 289 248 335 2.51e-18 86.3
MS.gene043601.t1 AT2G37260 46.667 75 36 3 224 296 84 156 1.34e-14 75.1
MS.gene043601.t1 AT2G30590 46.512 86 41 2 208 288 294 379 2.68e-18 86.7
MS.gene043601.t1 AT2G44745 42.000 100 51 3 185 280 105 201 3.08e-18 83.6
MS.gene043601.t1 AT5G64810 32.370 173 102 6 116 280 1 166 4.16e-18 82.8
MS.gene043601.t1 AT2G37260 43.158 95 44 3 198 289 330 417 4.42e-18 86.3
MS.gene043601.t1 AT2G37260 46.667 75 36 3 224 296 166 238 2.08e-14 75.1
MS.gene043601.t1 AT1G30650 39.831 118 64 2 173 283 160 277 4.61e-18 86.3
MS.gene043601.t1 AT4G23550 44.444 81 45 0 218 298 135 215 6.74e-18 84.3
MS.gene043601.t1 AT4G39410 44.737 76 41 1 206 281 206 280 7.33e-18 84.3
MS.gene043601.t1 AT2G24570 34.694 147 83 3 157 303 186 319 9.85e-18 84.3
MS.gene043601.t1 AT3G04670 52.381 63 30 0 219 281 258 320 1.00e-17 84.3
MS.gene043601.t1 AT2G34830 42.708 96 54 1 189 283 180 275 1.44e-17 84.7
MS.gene043601.t1 AT2G34830 40.777 103 60 1 189 290 189 291 1.47e-17 84.7
MS.gene043601.t1 AT4G01250 39.048 105 51 1 223 314 128 232 1.78e-17 83.2
MS.gene043601.t1 AT2G46130 41.053 95 51 2 196 290 3 92 2.52e-17 77.8
MS.gene043601.t1 AT3G58710 51.429 70 34 0 214 283 62 131 2.69e-17 82.0
MS.gene043601.t1 AT3G58710 51.429 70 34 0 214 283 61 130 2.75e-17 82.0
MS.gene043601.t1 AT4G31550 44.737 76 42 0 205 280 228 303 3.85e-17 82.4
MS.gene043601.t1 AT4G31550 44.737 76 42 0 205 280 227 302 3.99e-17 82.4
MS.gene043601.t1 AT5G52830 44.156 77 43 0 217 293 159 235 2.67e-16 80.5
MS.gene043601.t1 AT1G69310 40.741 81 43 2 200 280 124 199 3.08e-15 76.3
MS.gene043601.t1 AT5G45050 44.828 87 37 1 223 298 1180 1266 1.52e-14 76.6
MS.gene043601.t1 AT5G45050 44.828 87 37 1 223 298 1152 1238 1.68e-14 76.6
MS.gene043601.t1 AT5G45050 44.828 87 37 1 223 298 1041 1127 1.71e-14 76.6
MS.gene043601.t1 AT5G43290 40.244 82 47 2 204 284 94 174 8.44e-14 72.0
MS.gene043601.t1 AT5G45260 42.424 99 50 3 202 298 1192 1285 8.46e-14 74.3
MS.gene043601.t1 AT4G31800 27.861 201 102 6 64 260 52 213 1.01e-13 70.9
MS.gene043601.t1 AT2G21900 42.424 66 37 1 218 283 104 168 3.54e-13 68.6
MS.gene043601.t1 AT2G46400 37.143 105 62 2 200 300 81 185 1.44e-12 68.6
MS.gene043601.t1 AT3G01080 50.000 60 28 2 224 283 206 263 8.96e-12 66.2
MS.gene043601.t1 AT2G40740 42.500 80 42 2 224 299 174 253 5.03e-11 63.9
MS.gene043601.t1 AT2G40740 42.500 80 42 2 224 299 183 262 6.34e-11 63.5

Find 74 sgRNAs with CRISPR-Local

Find 147 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAAGCTTTATTGCAATTC+TGG 0.180524 3.2:-45479624 None:intergenic
CATAAATTTCTGAGCCAAAA+AGG 0.223319 3.2:-45479422 None:intergenic
GCTGCATAATATGCTCTTCT+AGG 0.248057 3.2:-45477758 None:intergenic
AGCAGCATCAATGCTTCTTT+CGG 0.264126 3.2:+45479216 MS.gene043601:CDS
GCAGCATCAATGCTTCTTTC+GGG 0.281642 3.2:+45479217 MS.gene043601:CDS
GGATGTCAATGGAGAAAATA+TGG 0.325975 3.2:+45478922 MS.gene043601:CDS
GATCCACTTTCTAATATTGT+TGG 0.346118 3.2:-45479271 None:intergenic
GGCAAGATCAGAAGCTAATA+TGG 0.362767 3.2:+45478389 MS.gene043601:CDS
AGAAAGCTCGTGTCTCAGTT+AGG 0.368659 3.2:+45478367 MS.gene043601:CDS
GCTCCATTTGGTGTAGGGTT+AGG 0.385260 3.2:-45476771 None:intergenic
TTGGTAGTACCATTATTGTT+TGG 0.387147 3.2:-45479586 None:intergenic
TGTAGGGTTAGGTCATTAAC+TGG 0.394243 3.2:-45476760 None:intergenic
GTATATACTTGCTTCCGAAC+TGG 0.394378 3.2:-45479012 None:intergenic
ACTTTCAATGATGGAAGTTA+TGG 0.396495 3.2:-45479554 None:intergenic
AATTCAAATCCAAACAATAA+TGG 0.398112 3.2:+45479577 MS.gene043601:CDS
AAACCATCTGCACTTGTCAT+TGG 0.402705 3.2:-45479241 None:intergenic
TGCTGAAGATAGAAGTGTTT+TGG 0.402931 3.2:+45479120 MS.gene043601:CDS
ACTAGAGCAGATGTGAATTT+CGG 0.415805 3.2:-45479526 None:intergenic
TTTGTTGCTAGGAGAAATCT+TGG 0.415907 3.2:-45476929 None:intergenic
CCCATGTTCAAGAATGGCCT+TGG 0.418842 3.2:-45478105 None:intergenic
CCTGAAAATGCTTTATTAGC+TGG 0.424836 3.2:-45478270 None:intergenic
AAGAATTCATCCTTGGAACT+TGG 0.426508 3.2:-45478305 None:intergenic
ATTTGAATTACTTTCAATGA+TGG 0.439445 3.2:-45479563 None:intergenic
GCTTATTATCGTTGCACAAT+GGG 0.441190 3.2:+45478979 MS.gene043601:CDS
GATTTCTCCTAGCAACAAAC+TGG 0.442717 3.2:+45476933 MS.gene043601:CDS
GTTTGAGAGAGCTAATTGAT+AGG 0.446725 3.2:+45477715 MS.gene043601:CDS
CTATCATCCAGTTTGTTGCT+AGG 0.450663 3.2:-45476940 None:intergenic
TGACCTAACCCTACACCAAA+TGG 0.459298 3.2:+45476768 MS.gene043601:CDS
TCCAAGGATGAATTCTTTCA+AGG 0.461640 3.2:+45478311 MS.gene043601:CDS
TCCAAGGCCATTCTTGAACA+TGG 0.473443 3.2:+45478104 MS.gene043601:CDS
CCAAGGATGAATTCTTTCAA+GGG 0.475452 3.2:+45478312 MS.gene043601:CDS
TTTATTAAATATAGGTTCAA+AGG 0.476329 3.2:+45479095 MS.gene043601:intron
GCAAAACCCATGTTCAAGAA+TGG 0.479173 3.2:-45478111 None:intergenic
TCTAGTGTGATAGTTGGAAA+TGG 0.482456 3.2:-45479337 None:intergenic
CTGGTCTCCACTTGTACCAT+TGG 0.482489 3.2:-45479605 None:intergenic
CCCTTGAAAGAATTCATCCT+TGG 0.483873 3.2:-45478312 None:intergenic
CCAAGGCCATTCTTGAACAT+GGG 0.488187 3.2:+45478105 MS.gene043601:CDS
CAACGTGATGATGCTCCATT+TGG 0.491889 3.2:-45476783 None:intergenic
GAAAGCTCGTGTCTCAGTTA+GGG 0.497941 3.2:+45478368 MS.gene043601:CDS
GTGCAACGATAATAAGCTCT+TGG 0.499916 3.2:-45478973 None:intergenic
TGGGGACTGCTTGTCCAGTT+CGG 0.502808 3.2:+45478998 MS.gene043601:CDS
GAGAAAATATGGACAGAAGA+TGG 0.503010 3.2:+45478933 MS.gene043601:CDS
TATGGACAGAAGATGGCAAA+GGG 0.509004 3.2:+45478940 MS.gene043601:CDS
CGATAATAAGCTCTTGGACA+TGG 0.509444 3.2:-45478967 None:intergenic
AATCCAACAATATTAGAAAG+TGG 0.511191 3.2:+45479268 MS.gene043601:CDS
AACAATAATGGTACTACCAA+TGG 0.512435 3.2:+45479589 MS.gene043601:CDS
GTGAGATCTAGTGTGATAGT+TGG 0.515834 3.2:-45479343 None:intergenic
TTATGCAGCTGAAGCAGAAA+CGG 0.537748 3.2:+45477772 MS.gene043601:CDS
AGCTTATTATCGTTGCACAA+TGG 0.538266 3.2:+45478978 MS.gene043601:CDS
GATGATGCTCCATTTGGTGT+AGG 0.540710 3.2:-45476777 None:intergenic
ATGATGCTCCATTTGGTGTA+GGG 0.544067 3.2:-45476776 None:intergenic
TTGCTGTTGGTGGTAGAGCA+TGG 0.544471 3.2:-45479168 None:intergenic
AGATTTCAGATGGATGTCAA+TGG 0.544482 3.2:+45478911 MS.gene043601:intron
AATGTATCACAGATTTCAGA+TGG 0.548456 3.2:+45478901 MS.gene043601:intron
AAATTGACTTTGTTGTAGTG+TGG 0.550522 3.2:-45479386 None:intergenic
TATACAAGAGAAAACTGAAA+GGG 0.553286 3.2:+45478224 MS.gene043601:CDS
GGCTTTCAAACCAAGTTCCA+AGG 0.554177 3.2:+45478295 MS.gene043601:CDS
CTGCATAATATGCTCTTCTA+GGG 0.557538 3.2:-45477757 None:intergenic
ATGGTATGAATATGATTCCA+AGG 0.557677 3.2:+45478088 MS.gene043601:CDS
AAAACGACTAATTATGGATG+AGG 0.558731 3.2:+45476708 None:intergenic
GAAGCAACTGAAGAAAAGAA+TGG 0.574998 3.2:+45478069 MS.gene043601:CDS
GGTACTACCAATGGTACAAG+TGG 0.580829 3.2:+45479598 MS.gene043601:CDS
TGATGCAAGGAACGAAAATG+AGG 0.583927 3.2:+45476972 MS.gene043601:CDS
GGACCAATGACAAGTGCAGA+TGG 0.584230 3.2:+45479238 MS.gene043601:CDS
ATAGAGAATATTCTGATGCA+AGG 0.587268 3.2:+45476959 MS.gene043601:CDS
GTTGCCATGGTGTGTGAACA+AGG 0.603956 3.2:-45479298 None:intergenic
TGAAGCTGAGAGTGTTGCCA+TGG 0.636245 3.2:-45479311 None:intergenic
TTATACAAGAGAAAACTGAA+AGG 0.640687 3.2:+45478223 MS.gene043601:CDS
ATATGGACAGAAGATGGCAA+AGG 0.645418 3.2:+45478939 MS.gene043601:CDS
ACTCCCTTGTTCACACACCA+TGG 0.651056 3.2:+45479294 MS.gene043601:CDS
GCAGAAACGGAGTAAACTTG+AGG 0.652579 3.2:+45477785 MS.gene043601:CDS
CTTATTATCGTTGCACAATG+GGG 0.668170 3.2:+45478980 MS.gene043601:CDS
ATGGACAGAAGATGGCAAAG+GGG 0.709928 3.2:+45478941 MS.gene043601:CDS
TTGCCATGGTGTGTGAACAA+GGG 0.728086 3.2:-45479297 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAATAAAATTGCAAAA+TGG - chr3.2:45476841-45476860 None:intergenic 10.0%
!!! ATGTAATCAAATTTTATAAA+AGG - chr3.2:45479048-45479067 None:intergenic 10.0%
!! CAAATATATTCTTAATGTAA+AGG - chr3.2:45477631-45477650 None:intergenic 15.0%
!! TATGCTTCTTTATTAAATAT+AGG + chr3.2:45479087-45479106 MS.gene043601:intron 15.0%
!! TTTATTAAATATAGGTTCAA+AGG + chr3.2:45479095-45479114 MS.gene043601:intron 15.0%
!!! TAGTTTTTTATATTATTTCC+AGG - chr3.2:45477241-45477260 None:intergenic 15.0%
!! AATTCAAATCCAAACAATAA+TGG + chr3.2:45479577-45479596 MS.gene043601:CDS 20.0%
!! ACACTATTTAAATAGAGATT+CGG - chr3.2:45478645-45478664 None:intergenic 20.0%
!! ATTTGAATTACTTTCAATGA+TGG - chr3.2:45479566-45479585 None:intergenic 20.0%
!! CAATGATTATAATTAAGTGT+AGG + chr3.2:45477182-45477201 MS.gene043601:intron 20.0%
!! TTCATTCAAATAATCGAAAA+CGG + chr3.2:45477504-45477523 MS.gene043601:intron 20.0%
!!! ATTCAAAAGTTTTACAACAA+TGG + chr3.2:45478198-45478217 MS.gene043601:CDS 20.0%
!!! ATTTTTCCTGTAATTAAATC+CGG - chr3.2:45477853-45477872 None:intergenic 20.0%
!!! GAATTGAGTTTTACAAATAT+TGG + chr3.2:45477135-45477154 MS.gene043601:intron 20.0%
!!! TAAGATTTTGTTCTTACAAA+TGG + chr3.2:45477972-45477991 MS.gene043601:intron 20.0%
!!! TTTTACTAAAAGAGCTAATT+TGG + chr3.2:45476861-45476880 MS.gene043601:intron 20.0%
!!! TTTTCCATTCCAAAAATATT+CGG - chr3.2:45479454-45479473 None:intergenic 20.0%
! AATCCAACAATATTAGAAAG+TGG + chr3.2:45479268-45479287 MS.gene043601:CDS 25.0%
! ACTTCACAAAAATGTAATGT+GGG + chr3.2:45477272-45477291 MS.gene043601:intron 25.0%
! ATAAATTTCTGAGCCAAAAA+GGG - chr3.2:45479424-45479443 None:intergenic 25.0%
! ATTTAAATAGTGTGGACAAA+AGG + chr3.2:45478652-45478671 MS.gene043601:intron 25.0%
! CAAAGTTAAACACAAAACTA+CGG + chr3.2:45477302-45477321 MS.gene043601:intron 25.0%
! GAATCTCTATTTAAATAGTG+TGG + chr3.2:45478644-45478663 MS.gene043601:intron 25.0%
! GTGTGTGTCTATATATATAT+TGG + chr3.2:45478809-45478828 MS.gene043601:intron 25.0%
! TACTTCACAAAAATGTAATG+TGG + chr3.2:45477271-45477290 MS.gene043601:intron 25.0%
! TAGCGAAGAAAAATGTTATT+TGG + chr3.2:45477559-45477578 MS.gene043601:intron 25.0%
! TATACAAGAGAAAACTGAAA+GGG + chr3.2:45478224-45478243 MS.gene043601:CDS 25.0%
! TCAACTTTATAATAGAGTGA+TGG - chr3.2:45477212-45477231 None:intergenic 25.0%
! TTATACAAGAGAAAACTGAA+AGG + chr3.2:45478223-45478242 MS.gene043601:CDS 25.0%
! TTTAATGACTAACATGGATT+TGG + chr3.2:45478027-45478046 MS.gene043601:intron 25.0%
!! AAAATGAGGTATGTTTTTCT+TGG + chr3.2:45476986-45477005 MS.gene043601:intron 25.0%
!! GAGTTTTACAAATATTGGAT+TGG + chr3.2:45477140-45477159 MS.gene043601:intron 25.0%
!! TAACATTTTTCTTCGCTATA+AGG - chr3.2:45477557-45477576 None:intergenic 25.0%
!! TATTTAAATAGAGATTCGGT+TGG - chr3.2:45478641-45478660 None:intergenic 25.0%
!! TTCCTCTTAGATTTTCAAAT+TGG + chr3.2:45478613-45478632 MS.gene043601:intron 25.0%
!!! CTAACAAATTTTAGCATAGA+TGG + chr3.2:45478493-45478512 MS.gene043601:intron 25.0%
AAAGAAGAATGATCATGTGA+TGG - chr3.2:45477114-45477133 None:intergenic 30.0%
AACAATAATGGTACTACCAA+TGG + chr3.2:45479589-45479608 MS.gene043601:CDS 30.0%
AATGTATCACAGATTTCAGA+TGG + chr3.2:45478901-45478920 MS.gene043601:intron 30.0%
AGTTACCTAATATACGTTCA+TGG - chr3.2:45477431-45477450 None:intergenic 30.0%
ATAGAGAATATTCTGATGCA+AGG + chr3.2:45476959-45476978 MS.gene043601:CDS 30.0%
ATGGTATGAATATGATTCCA+AGG + chr3.2:45478088-45478107 MS.gene043601:CDS 30.0%
CACCAATTTGAAAATCTAAG+AGG - chr3.2:45478618-45478637 None:intergenic 30.0%
CATAAATTTCTGAGCCAAAA+AGG - chr3.2:45479425-45479444 None:intergenic 30.0%
CTTGAACATATAACAATGAG+TGG - chr3.2:45477999-45478018 None:intergenic 30.0%
GATCCACTTTCTAATATTGT+TGG - chr3.2:45479274-45479293 None:intergenic 30.0%
TTCACAAGAGAGAAAAAACA+TGG + chr3.2:45478146-45478165 MS.gene043601:CDS 30.0%
TTGATAAATGTTGTGTAGAC+TGG - chr3.2:45478748-45478767 None:intergenic 30.0%
! AAATTGACTTTGTTGTAGTG+TGG - chr3.2:45479389-45479408 None:intergenic 30.0%
! ACTTTCAATGATGGAAGTTA+TGG - chr3.2:45479557-45479576 None:intergenic 30.0%
! AGCTAGTTTAATGACTAACA+TGG + chr3.2:45478021-45478040 MS.gene043601:intron 30.0%
! TGGTACATAGACAAGTTTTA+CGG - chr3.2:45478780-45478799 None:intergenic 30.0%
! TTGGTAGTACCATTATTGTT+TGG - chr3.2:45479589-45479608 None:intergenic 30.0%
!! AAAAAACATGGTTGACTTGA+TGG + chr3.2:45478158-45478177 MS.gene043601:CDS 30.0%
!! AAAAAATCAACTAGTTCTGC+CGG + chr3.2:45477831-45477850 MS.gene043601:intron 30.0%
!! CAGCTAATAAAGCATTTTCA+GGG + chr3.2:45478271-45478290 MS.gene043601:CDS 30.0%
!! CGCTATTTCAACTTTTCTAT+TGG - chr3.2:45478537-45478556 None:intergenic 30.0%
!! GTTTTGGTAACAACATATGA+AGG + chr3.2:45479136-45479155 MS.gene043601:CDS 30.0%
!!! AACAATTTTGTTGTTCGACA+AGG + chr3.2:45477584-45477603 MS.gene043601:intron 30.0%
!!! ATGTTTTTTCTCTCTTGTGA+AGG - chr3.2:45478147-45478166 None:intergenic 30.0%
AAGAATTCATCCTTGGAACT+TGG - chr3.2:45478308-45478327 None:intergenic 35.0%
ACTAGAGCAGATGTGAATTT+CGG - chr3.2:45479529-45479548 None:intergenic 35.0%
AGATTTCAGATGGATGTCAA+TGG + chr3.2:45478911-45478930 MS.gene043601:intron 35.0%
AGCTTATTATCGTTGCACAA+TGG + chr3.2:45478978-45478997 MS.gene043601:CDS 35.0%
CCAAGGATGAATTCTTTCAA+GGG + chr3.2:45478312-45478331 MS.gene043601:CDS 35.0%
CTACACCATGAACGTATATT+AGG + chr3.2:45477423-45477442 MS.gene043601:intron 35.0%
CTGCATAATATGCTCTTCTA+GGG - chr3.2:45477760-45477779 None:intergenic 35.0%
CTTATTATCGTTGCACAATG+GGG + chr3.2:45478980-45478999 MS.gene043601:CDS 35.0%
GAAGCAACTGAAGAAAAGAA+TGG + chr3.2:45478069-45478088 MS.gene043601:CDS 35.0%
GAGAAAATATGGACAGAAGA+TGG + chr3.2:45478933-45478952 MS.gene043601:CDS 35.0%
GCTTATTATCGTTGCACAAT+GGG + chr3.2:45478979-45478998 MS.gene043601:CDS 35.0%
GGATGTCAATGGAGAAAATA+TGG + chr3.2:45478922-45478941 MS.gene043601:CDS 35.0%
GTTGAAATAGCGACGAAAAA+AGG + chr3.2:45478545-45478564 MS.gene043601:intron 35.0%
GTTTGAGAGAGCTAATTGAT+AGG + chr3.2:45477715-45477734 MS.gene043601:CDS 35.0%
TAGACACACACAATATACAC+TGG - chr3.2:45478800-45478819 None:intergenic 35.0%
TCCAAGGATGAATTCTTTCA+AGG + chr3.2:45478311-45478330 MS.gene043601:CDS 35.0%
TCGCTATAAGGCTTATTCTA+GGG - chr3.2:45477545-45477564 None:intergenic 35.0%
TCTAGTGTGATAGTTGGAAA+TGG - chr3.2:45479340-45479359 None:intergenic 35.0%
TTCGCTATAAGGCTTATTCT+AGG - chr3.2:45477546-45477565 None:intergenic 35.0%
TTTGTTGCTAGGAGAAATCT+TGG - chr3.2:45476932-45476951 None:intergenic 35.0%
! ATGTCAGCTCCGAATATTTT+TGG + chr3.2:45479442-45479461 MS.gene043601:CDS 35.0%
! CCTGAAAATGCTTTATTAGC+TGG - chr3.2:45478273-45478292 None:intergenic 35.0%
! TAACCTTCTTCAACCCTTTT+TGG + chr3.2:45479408-45479427 MS.gene043601:CDS 35.0%
! TACATAGACAAGTTTTACGG+CGG - chr3.2:45478777-45478796 None:intergenic 35.0%
!! ATGATCATGTGATGGATGAT+AGG - chr3.2:45477106-45477125 None:intergenic 35.0%
!! CCAGCTAATAAAGCATTTTC+AGG + chr3.2:45478270-45478289 MS.gene043601:CDS 35.0%
!! CTAATAAAGCATTTTCAGGG+TGG + chr3.2:45478274-45478293 MS.gene043601:CDS 35.0%
!! GTTGATTTTCAGCATTCGTT+TGG - chr3.2:45477695-45477714 None:intergenic 35.0%
!! TTATAAAGTTGAGTTGAGCC+TGG + chr3.2:45477220-45477239 MS.gene043601:intron 35.0%
!! TTTTAGCATAGATGGCTTGT+TGG + chr3.2:45478501-45478520 MS.gene043601:intron 35.0%
!!! AGCTCCGAATATTTTTGGAA+TGG + chr3.2:45479447-45479466 MS.gene043601:CDS 35.0%
!!! TGCTGAAGATAGAAGTGTTT+TGG + chr3.2:45479120-45479139 MS.gene043601:CDS 35.0%
AAACCATCTGCACTTGTCAT+TGG - chr3.2:45479244-45479263 None:intergenic 40.0%
ACCACCAACAGCAAAAACAA+TGG + chr3.2:45479177-45479196 MS.gene043601:CDS 40.0%
AGCAGCATCAATGCTTCTTT+CGG + chr3.2:45479216-45479235 MS.gene043601:CDS 40.0%
ATATGGACAGAAGATGGCAA+AGG + chr3.2:45478939-45478958 MS.gene043601:CDS 40.0%
CCCTTGAAAGAATTCATCCT+TGG - chr3.2:45478315-45478334 None:intergenic 40.0%
CGATAATAAGCTCTTGGACA+TGG - chr3.2:45478970-45478989 None:intergenic 40.0%
GAGAATGCAACAAGATTGTG+TGG + chr3.2:45478831-45478850 MS.gene043601:intron 40.0%
GATTTCTCCTAGCAACAAAC+TGG + chr3.2:45476933-45476952 MS.gene043601:CDS 40.0%
GCAAAACCCATGTTCAAGAA+TGG - chr3.2:45478114-45478133 None:intergenic 40.0%
GCTGCATAATATGCTCTTCT+AGG - chr3.2:45477761-45477780 None:intergenic 40.0%
GGCAAGATCAGAAGCTAATA+TGG + chr3.2:45478389-45478408 MS.gene043601:CDS 40.0%
GTATATACTTGCTTCCGAAC+TGG - chr3.2:45479015-45479034 None:intergenic 40.0%
GTGAGATCTAGTGTGATAGT+TGG - chr3.2:45479346-45479365 None:intergenic 40.0%
GTGCAACGATAATAAGCTCT+TGG - chr3.2:45478976-45478995 None:intergenic 40.0%
GTTCTGCCGGATTTAATTAC+AGG + chr3.2:45477844-45477863 MS.gene043601:intron 40.0%
TACTGAGCTTCTACTTCTAG+AGG + chr3.2:45478676-45478695 MS.gene043601:intron 40.0%
TATGGACAGAAGATGGCAAA+GGG + chr3.2:45478940-45478959 MS.gene043601:CDS 40.0%
TGATGCAAGGAACGAAAATG+AGG + chr3.2:45476972-45476991 MS.gene043601:CDS 40.0%
TGTAGGGTTAGGTCATTAAC+TGG - chr3.2:45476763-45476782 None:intergenic 40.0%
TTATGCAGCTGAAGCAGAAA+CGG + chr3.2:45477772-45477791 MS.gene043601:CDS 40.0%
! GTAGAAAACCTGGACTTGTT+AGG - chr3.2:45477407-45477426 None:intergenic 40.0%
!! ATGATGCTCCATTTGGTGTA+GGG - chr3.2:45476779-45476798 None:intergenic 40.0%
!! CTATCATCCAGTTTGTTGCT+AGG - chr3.2:45476943-45476962 None:intergenic 40.0%
!!! GATGCCATTGTTTTTGCTGT+TGG - chr3.2:45479184-45479203 None:intergenic 40.0%
AGAAAGCTCGTGTCTCAGTT+AGG + chr3.2:45478367-45478386 MS.gene043601:CDS 45.0%
AGCAGCGTACTGTATACACA+AGG - chr3.2:45477655-45477674 None:intergenic 45.0%
ATGGACAGAAGATGGCAAAG+GGG + chr3.2:45478941-45478960 MS.gene043601:CDS 45.0%
CCAAGGCCATTCTTGAACAT+GGG + chr3.2:45478105-45478124 MS.gene043601:CDS 45.0%
CGTTCATGGTGTAGAAAACC+TGG - chr3.2:45477417-45477436 None:intergenic 45.0%
GAAAGCTCGTGTCTCAGTTA+GGG + chr3.2:45478368-45478387 MS.gene043601:CDS 45.0%
GAGCCAAAAAGGGTTGAAGA+AGG - chr3.2:45479414-45479433 None:intergenic 45.0%
GCAGAAACGGAGTAAACTTG+AGG + chr3.2:45477785-45477804 MS.gene043601:CDS 45.0%
GCAGCATCAATGCTTCTTTC+GGG + chr3.2:45479217-45479236 MS.gene043601:CDS 45.0%
GGCTTTCAAACCAAGTTCCA+AGG + chr3.2:45478295-45478314 MS.gene043601:CDS 45.0%
GGTACTACCAATGGTACAAG+TGG + chr3.2:45479598-45479617 MS.gene043601:CDS 45.0%
TCCAAGGCCATTCTTGAACA+TGG + chr3.2:45478104-45478123 MS.gene043601:CDS 45.0%
TGACCTAACCCTACACCAAA+TGG + chr3.2:45476768-45476787 MS.gene043601:CDS 45.0%
TTGCCATGGTGTGTGAACAA+GGG - chr3.2:45479300-45479319 None:intergenic 45.0%
! CAACGTGATGATGCTCCATT+TGG - chr3.2:45476786-45476805 None:intergenic 45.0%
! GAGCTTCTACTTCTAGAGGA+CGG + chr3.2:45478680-45478699 MS.gene043601:intron 45.0%
!! GATGATGCTCCATTTGGTGT+AGG - chr3.2:45476780-45476799 None:intergenic 45.0%
!!! GCCATTGTTTTTGCTGTTGG+TGG - chr3.2:45479181-45479200 None:intergenic 45.0%
!! AAAAAGTAATTTAATTATAT+TGG + chr3.2:45477922-45477941 MS.gene043601:intron 5.0%
ACTCCCTTGTTCACACACCA+TGG + chr3.2:45479294-45479313 MS.gene043601:CDS 50.0%
CCCATGTTCAAGAATGGCCT+TGG - chr3.2:45478108-45478127 None:intergenic 50.0%
CTGGTCTCCACTTGTACCAT+TGG - chr3.2:45479608-45479627 None:intergenic 50.0%
GGACCAATGACAAGTGCAGA+TGG + chr3.2:45479238-45479257 MS.gene043601:CDS 50.0%
GGACGGCGTCATTAATGTGT+TGG + chr3.2:45478697-45478716 MS.gene043601:intron 50.0%
GTTGCCATGGTGTGTGAACA+AGG - chr3.2:45479301-45479320 None:intergenic 50.0%
!! ACCTGGACTTGTTAGGTGTC+AGG - chr3.2:45477400-45477419 None:intergenic 50.0%
!! GCTCCATTTGGTGTAGGGTT+AGG - chr3.2:45476774-45476793 None:intergenic 50.0%
!! TGAAGCTGAGAGTGTTGCCA+TGG - chr3.2:45479314-45479333 None:intergenic 50.0%
!! TTGCTGTTGGTGGTAGAGCA+TGG - chr3.2:45479171-45479190 None:intergenic 50.0%
GCCTGACACCTAACAAGTCC+AGG + chr3.2:45477396-45477415 MS.gene043601:intron 55.0%
TGGGGACTGCTTGTCCAGTT+CGG + chr3.2:45478998-45479017 MS.gene043601:CDS 55.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 45476721 45479645 45476721 ID=MS.gene043601
chr3.2 mRNA 45476721 45479645 45476721 ID=MS.gene043601.t1;Parent=MS.gene043601
chr3.2 exon 45476721 45476807 45476721 ID=MS.gene043601.t1.exon1;Parent=MS.gene043601.t1
chr3.2 CDS 45476721 45476807 45476721 ID=cds.MS.gene043601.t1;Parent=MS.gene043601.t1
chr3.2 exon 45476910 45476993 45476910 ID=MS.gene043601.t1.exon2;Parent=MS.gene043601.t1
chr3.2 CDS 45476910 45476993 45476910 ID=cds.MS.gene043601.t1;Parent=MS.gene043601.t1
chr3.2 exon 45477666 45477806 45477666 ID=MS.gene043601.t1.exon3;Parent=MS.gene043601.t1
chr3.2 CDS 45477666 45477806 45477666 ID=cds.MS.gene043601.t1;Parent=MS.gene043601.t1
chr3.2 exon 45478060 45478410 45478060 ID=MS.gene043601.t1.exon4;Parent=MS.gene043601.t1
chr3.2 CDS 45478060 45478410 45478060 ID=cds.MS.gene043601.t1;Parent=MS.gene043601.t1
chr3.2 exon 45478913 45479026 45478913 ID=MS.gene043601.t1.exon5;Parent=MS.gene043601.t1
chr3.2 CDS 45478913 45479026 45478913 ID=cds.MS.gene043601.t1;Parent=MS.gene043601.t1
chr3.2 exon 45479109 45479645 45479109 ID=MS.gene043601.t1.exon6;Parent=MS.gene043601.t1
chr3.2 CDS 45479109 45479645 45479109 ID=cds.MS.gene043601.t1;Parent=MS.gene043601.t1
Gene Sequence

>MS.gene043601

ATGGATGAGGTTGATTTCTTTGCAGAGAAGAAAATGAGTCCAGTTAATGACCTAACCCTACACCAAATGGAGCATCATCACGTTGATGTAATTGAACTCATAATTTCATTAGATATTCCATTTTGCAATTTTATTTTATTTTTTACTAAAAGAGCTAATTTGGCTTATCATTGTTGATGATTTTTTTAGACTAGTTTAGATCTTCTCACCAAGATTTCTCCTAGCAACAAACTGGATGATAGAGAATATTCTGATGCAAGGAACGAAAATGAGGTATGTTTTTCTTGGTATTCATCTATAGACTATAGATATTGTTTTGATTTTGTTAAGAAAGATTTTTGTTTTCTTTCACATTATCACAACATATAGCTTTCTATATTTTCCTATCATCCATCACATGATCATTCTTCTTTCGAATTGAGTTTTACAAATATTGGATTGGATATGTGATATGAGTTCAACAATGATTATAATTAAGTGTAGGAAATCCATCACTCTATTATAAAGTTGAGTTGAGCCTGGAAATAATATAAAAAACTAAGAAACACGATACTTCACAAAAATGTAATGTGGGAAAACTTCAAAGTTAAACACAAAACTACGGTTTTTGTCTAATGAAGACTAAATAATTAGAACACTCTAATTTTTTTCACAATACATGAAATTTTCTCAAACGCCTGACACCTAACAAGTCCAGGTTTTCTACACCATGAACGTATATTAGGTAACTTAATTATACAATGATTGTTAATGATTTTATGCATAAAAAAAATACTAAAAGAATTCATTCAAATAATCGAAAACGGTTTCATTTCTTCTTGCCCTAGAATAAGCCTTATAGCGAAGAAAAATGTTATTTGGACAACAATTTTGTTGTTCGACAAGGTGTGTTTGTATGTATATTTTTCCTTTACATTAAGAATATATTTGTCCTTGTGTATACAGTACGCTGCTGTGTTAGCTAAATTGCACCAAACGAATGCTGAAAATCAACGTTTGAGAGAGCTAATTGATAGGCTTAGAATTGATCACAATGCCCTAGAAGAGCATATTATGCAGCTGAAGCAGAAACGGAGTAAACTTGAGGTAGTTCTATTCTTTCTTTTATAAAAAAAATCAACTAGTTCTGCCGGATTTAATTACAGGAAAAATAATTAATTATAATCATATTGAAAATAATTTAATTATATAATACAATTAAAAAAAGTAATTTAATTATATTGGATTTAAAGTTTAAAGTATAACTTATTTTAAGATTTTGTTCTTACAAATGGACCACTCATTGTTATATGTTCAAGCTAGCTAGTTTAATGACTAACATGGATTTGGTTATGTATAGATTAATGATGAAGCAACTGAAGAAAAGAATGGTATGAATATGATTCCAAGGCCATTCTTGAACATGGGTTTTGCTAAAGATGAGCCTTCACAAGAGAGAAAAAACATGGTTGACTTGATGGAGTGTGATAAAAAGAGTATTCAAAAGTTTTACAACAATGGAATTATACAAGAGAAAACTGAAAGGGAAGAAGATCATCATGAGAATTCACCAGCTAATAAAGCATTTTCAGGGTGGCTTTCAAACCAAGTTCCAAGGATGAATTCTTTCAAGGGTGTTGATGATCAAGCATCAGAATCAATGATTAAGAAAGCTCGTGTCTCAGTTAGGGCAAGATCAGAAGCTAATATGGTTAGTGTCAAATTAATTAGTTAATCATGCTTGTTTATATCTTTCAAAACTTTTCTACTAATGATATCTCACATATAATTAACTAACAAATTTTAGCATAGATGGCTTGTTGGTGAATTTTAACCAATAGAAAAGTTGAAATAGCGACGAAAAAAGGAAAGATATGTCTCTAACTTCATCGCTAAGTATTAAATTTGATGAATTCCTCTTAGATTTTCAAATTGGTGCCAACCGAATCTCTATTTAAATAGTGTGGACAAAAGGATACTGAGCTTCTACTTCTAGAGGACGGCGTCATTAATGTGTTGGATAAGTTTTGAACAATTTTCAAACACCAGTCTACACAACATTTATCAAACTAGTCCGCCGTAAAACTTGTCTATGTACCAGTGTATATTGTGTGTGTCTATATATATATTGGAGAATGCAACAAGATTGTGTGGTATATGAATTACAGTTGCTGCTAGACTAATTTTCTTTGTGATCAATTAATGTATCACAGATTTCAGATGGATGTCAATGGAGAAAATATGGACAGAAGATGGCAAAGGGGAATCCATGTCCAAGAGCTTATTATCGTTGCACAATGGGGACTGCTTGTCCAGTTCGGAAGCAAGTATATACAATCTCTCTACCTTTTATAAAATTTGATTACATACTTCTACATTTTAATTATTATGCTTCTTTATTAAATATAGGTTCAAAGGTGTGCTGAAGATAGAAGTGTTTTGGTAACAACATATGAAGGACAACATAACCATGCTCTACCACCAACAGCAAAAACAATGGCATCAACAACAACATCAGCAGCATCAATGCTTCTTTCGGGACCAATGACAAGTGCAGATGGTTTAATAAATCCAACAATATTAGAAAGTGGATCACTCCCTTGTTCACACACCATGGCAACACTCTCAGCTTCAGCTCCATTTCCAACTATCACACTAGATCTCACTGAAGAAGCTATCAATAATTCCACACTACAACAAAGTCAATTTAACCTTCTTCAACCCTTTTTGGCTCAGAAATTTATGTCAGCTCCGAATATTTTTGGAATGGAAAATGCTTCATTTGCTGATACAGTTAGTGCTGCAACAGCTGCTATGACTTCTGATCCGAAATTCACATCTGCTCTAGTTGCTGCCATAACTTCCATCATTGAAAGTAATTCAAATCCAAACAATAATGGTACTACCAATGGTACAAGTGGAGACCAGAATTGCAATAAAGCTTAA
Protein sequence

>MS.gene043601.t1

MDEVDFFAEKKMSPVNDLTLHQMEHHHVDTSLDLLTKISPSNKLDDREYSDARNENEYAAVLAKLHQTNAENQRLRELIDRLRIDHNALEEHIMQLKQKRSKLEINDEATEEKNGMNMIPRPFLNMGFAKDEPSQERKNMVDLMECDKKSIQKFYNNGIIQEKTEREEDHHENSPANKAFSGWLSNQVPRMNSFKGVDDQASESMIKKARVSVRARSEANMISDGCQWRKYGQKMAKGNPCPRAYYRCTMGTACPVRKQVQRCAEDRSVLVTTYEGQHNHALPPTAKTMASTTTSAASMLLSGPMTSADGLINPTILESGSLPCSHTMATLSASAPFPTITLDLTEEAINNSTLQQSQFNLLQPFLAQKFMSAPNIFGMENASFADTVSAATAAMTSDPKFTSALVAAITSIIESNSNPNNNGTTNGTSGDQNCNKA