Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043702.t1 | XP_003622663.1 | 79.7 | 316 | 61 | 2 | 11 | 324 | 1 | 315 | 2.50E-142 | 515 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043702.t1 | Q8L3W1 | 29.1 | 340 | 171 | 10 | 21 | 299 | 6 | 336 | 1.3e-25 | 118.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043702.t1 | G7KVV4 | 79.7 | 316 | 61 | 2 | 11 | 324 | 1 | 315 | 1.8e-142 | 515.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene043702.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043702.t1 | MTR_7g050560 | 79.747 | 316 | 61 | 2 | 11 | 324 | 1 | 315 | 0.0 | 525 |
| MS.gene043702.t1 | MTR_7g050590 | 72.014 | 293 | 66 | 3 | 36 | 312 | 1 | 293 | 2.76e-155 | 437 |
| MS.gene043702.t1 | MTR_7g050580 | 64.545 | 330 | 86 | 4 | 11 | 324 | 1 | 315 | 2.47e-146 | 415 |
| MS.gene043702.t1 | MTR_7g050710 | 64.798 | 321 | 93 | 5 | 11 | 312 | 1 | 320 | 2.14e-141 | 402 |
| MS.gene043702.t1 | MTR_3g098790 | 62.696 | 319 | 95 | 5 | 11 | 312 | 1 | 312 | 1.35e-136 | 390 |
| MS.gene043702.t1 | MTR_7g050720 | 60.063 | 318 | 99 | 7 | 11 | 301 | 1 | 317 | 1.04e-124 | 360 |
| MS.gene043702.t1 | MTR_8g103940 | 37.459 | 307 | 154 | 9 | 19 | 299 | 37 | 331 | 4.45e-52 | 179 |
| MS.gene043702.t1 | MTR_1g035460 | 35.906 | 298 | 146 | 6 | 36 | 299 | 1 | 287 | 3.78e-51 | 174 |
| MS.gene043702.t1 | MTR_1g108780 | 36.644 | 292 | 142 | 9 | 37 | 299 | 13 | 290 | 3.33e-47 | 165 |
| MS.gene043702.t1 | MTR_7g050640 | 62.832 | 113 | 40 | 1 | 11 | 121 | 1 | 113 | 2.75e-43 | 145 |
| MS.gene043702.t1 | MTR_3g061370 | 36.332 | 289 | 163 | 9 | 18 | 298 | 6 | 281 | 6.37e-43 | 149 |
| MS.gene043702.t1 | MTR_5g044670 | 31.561 | 301 | 181 | 7 | 21 | 304 | 16 | 308 | 4.23e-42 | 149 |
| MS.gene043702.t1 | MTR_3g061320 | 35.932 | 295 | 151 | 10 | 18 | 298 | 9 | 279 | 3.23e-41 | 145 |
| MS.gene043702.t1 | MTR_3g061350 | 33.673 | 294 | 179 | 8 | 11 | 298 | 1 | 284 | 2.88e-38 | 137 |
| MS.gene043702.t1 | MTR_3g061310 | 33.788 | 293 | 164 | 10 | 19 | 298 | 10 | 285 | 5.35e-37 | 134 |
| MS.gene043702.t1 | MTR_3g061340 | 34.122 | 296 | 146 | 12 | 20 | 298 | 11 | 274 | 9.83e-35 | 128 |
| MS.gene043702.t1 | MTR_1g035640 | 31.525 | 295 | 179 | 9 | 21 | 307 | 9 | 288 | 1.81e-32 | 125 |
| MS.gene043702.t1 | MTR_6g043890 | 31.973 | 294 | 164 | 9 | 19 | 288 | 13 | 294 | 2.49e-32 | 123 |
| MS.gene043702.t1 | MTR_4g119990 | 31.148 | 305 | 179 | 11 | 19 | 298 | 13 | 311 | 2.69e-32 | 124 |
| MS.gene043702.t1 | MTR_3g061330 | 55.446 | 101 | 43 | 1 | 19 | 119 | 10 | 108 | 8.67e-32 | 119 |
| MS.gene043702.t1 | MTR_1g035570 | 32.895 | 304 | 172 | 10 | 11 | 299 | 1 | 287 | 9.09e-31 | 120 |
| MS.gene043702.t1 | MTR_3g061290 | 53.922 | 102 | 45 | 1 | 18 | 119 | 9 | 108 | 5.55e-30 | 113 |
| MS.gene043702.t1 | MTR_1g035620 | 30.216 | 278 | 184 | 6 | 21 | 297 | 9 | 277 | 1.43e-28 | 114 |
| MS.gene043702.t1 | MTR_3g005490 | 27.972 | 286 | 164 | 8 | 18 | 302 | 18 | 262 | 2.34e-28 | 110 |
| MS.gene043702.t1 | MTR_5g070440 | 27.000 | 300 | 172 | 7 | 11 | 302 | 11 | 271 | 5.54e-28 | 110 |
| MS.gene043702.t1 | MTR_3g005480 | 27.891 | 294 | 155 | 9 | 18 | 302 | 18 | 263 | 1.72e-27 | 108 |
| MS.gene043702.t1 | MTR_3g005420 | 28.716 | 296 | 176 | 8 | 9 | 302 | 277 | 539 | 3.94e-27 | 111 |
| MS.gene043702.t1 | MTR_3g005420 | 23.656 | 279 | 141 | 7 | 18 | 286 | 37 | 253 | 7.19e-15 | 75.5 |
| MS.gene043702.t1 | MTR_1g050845 | 29.225 | 284 | 167 | 5 | 21 | 297 | 9 | 265 | 9.32e-27 | 111 |
| MS.gene043702.t1 | MTR_3g005460 | 27.835 | 291 | 162 | 9 | 9 | 286 | 249 | 504 | 5.99e-25 | 105 |
| MS.gene043702.t1 | MTR_3g005460 | 25.899 | 278 | 152 | 6 | 9 | 286 | 13 | 236 | 5.52e-20 | 90.9 |
| MS.gene043702.t1 | MTR_1g021360 | 28.014 | 282 | 183 | 8 | 19 | 286 | 182 | 457 | 2.60e-24 | 103 |
| MS.gene043702.t1 | MTR_1g021360 | 31.429 | 140 | 93 | 3 | 19 | 156 | 24 | 162 | 9.60e-12 | 65.9 |
| MS.gene043702.t1 | MTR_1g021410 | 25.610 | 328 | 190 | 9 | 19 | 298 | 21 | 342 | 4.08e-24 | 101 |
| MS.gene043702.t1 | MTR_6g061070 | 27.273 | 319 | 184 | 10 | 16 | 297 | 13 | 320 | 4.87e-24 | 102 |
| MS.gene043702.t1 | MTR_3g005495 | 30.686 | 277 | 137 | 9 | 14 | 286 | 236 | 461 | 7.01e-24 | 102 |
| MS.gene043702.t1 | MTR_3g005495 | 25.200 | 250 | 126 | 7 | 37 | 286 | 29 | 217 | 1.13e-17 | 84.0 |
| MS.gene043702.t1 | MTR_1g021330 | 25.146 | 342 | 193 | 7 | 19 | 300 | 24 | 362 | 3.14e-23 | 99.0 |
| MS.gene043702.t1 | MTR_1g021440 | 25.301 | 332 | 180 | 9 | 19 | 287 | 21 | 347 | 1.65e-22 | 97.1 |
| MS.gene043702.t1 | MTR_3g061220 | 45.098 | 102 | 41 | 2 | 18 | 119 | 9 | 95 | 2.75e-22 | 90.5 |
| MS.gene043702.t1 | MTR_1g021400 | 25.382 | 327 | 192 | 8 | 19 | 298 | 28 | 349 | 2.84e-22 | 96.3 |
| MS.gene043702.t1 | MTR_1g021270 | 25.575 | 348 | 191 | 11 | 16 | 300 | 11 | 353 | 5.02e-22 | 97.1 |
| MS.gene043702.t1 | MTR_1g035650 | 32.381 | 210 | 103 | 5 | 21 | 210 | 9 | 199 | 9.12e-22 | 91.7 |
| MS.gene043702.t1 | MTR_1g035480 | 35.260 | 173 | 96 | 6 | 15 | 185 | 11 | 169 | 2.14e-20 | 87.4 |
| MS.gene043702.t1 | MTR_1g034240 | 40.404 | 99 | 59 | 0 | 21 | 119 | 7 | 105 | 1.58e-19 | 89.0 |
| MS.gene043702.t1 | MTR_1g034240 | 30.534 | 131 | 84 | 3 | 170 | 299 | 268 | 392 | 4.23e-11 | 63.9 |
| MS.gene043702.t1 | MTR_4g068320 | 37.963 | 108 | 65 | 1 | 18 | 123 | 3 | 110 | 4.70e-19 | 87.8 |
| MS.gene043702.t1 | MTR_4g068320 | 31.852 | 135 | 85 | 3 | 170 | 303 | 264 | 392 | 4.97e-12 | 66.6 |
| MS.gene043702.t1 | MTR_1g021435 | 24.776 | 335 | 194 | 8 | 19 | 297 | 20 | 352 | 8.55e-19 | 86.3 |
| MS.gene043702.t1 | MTR_1g033740 | 34.752 | 141 | 79 | 4 | 17 | 157 | 18 | 145 | 1.22e-17 | 80.1 |
| MS.gene043702.t1 | MTR_1g035440 | 39.815 | 108 | 58 | 2 | 19 | 122 | 13 | 117 | 1.64e-17 | 80.9 |
| MS.gene043702.t1 | MTR_1g035500 | 33.113 | 151 | 87 | 4 | 19 | 169 | 23 | 159 | 7.33e-17 | 77.8 |
| MS.gene043702.t1 | MTR_1g035520 | 26.159 | 302 | 177 | 9 | 36 | 297 | 87 | 382 | 3.44e-16 | 79.0 |
| MS.gene043702.t1 | MTR_3g005440 | 33.043 | 115 | 72 | 2 | 37 | 150 | 36 | 146 | 1.16e-15 | 77.8 |
| MS.gene043702.t1 | MTR_3g005440 | 32.000 | 125 | 85 | 0 | 9 | 133 | 230 | 354 | 6.86e-15 | 75.5 |
| MS.gene043702.t1 | MTR_1g034210 | 38.384 | 99 | 59 | 1 | 21 | 119 | 7 | 103 | 2.02e-15 | 76.3 |
| MS.gene043702.t1 | MTR_1g021440 | 36.559 | 93 | 58 | 1 | 19 | 111 | 21 | 112 | 3.09e-15 | 75.1 |
| MS.gene043702.t1 | MTR_1g034210 | 38.384 | 99 | 59 | 1 | 21 | 119 | 7 | 103 | 3.30e-15 | 75.9 |
| MS.gene043702.t1 | MTR_1g021440 | 36.559 | 93 | 58 | 1 | 19 | 111 | 21 | 112 | 3.90e-15 | 75.1 |
| MS.gene043702.t1 | MTR_1g021320 | 32.000 | 150 | 92 | 2 | 19 | 162 | 23 | 168 | 4.36e-15 | 76.6 |
| MS.gene043702.t1 | MTR_1g021320 | 27.950 | 161 | 110 | 2 | 14 | 168 | 172 | 332 | 3.19e-12 | 67.8 |
| MS.gene043702.t1 | MTR_1g035510 | 36.154 | 130 | 67 | 4 | 36 | 165 | 1 | 114 | 6.83e-15 | 73.2 |
| MS.gene043702.t1 | MTR_3g005420 | 23.656 | 279 | 141 | 7 | 18 | 286 | 18 | 234 | 8.34e-15 | 75.1 |
| MS.gene043702.t1 | MTR_1g021440 | 36.559 | 93 | 58 | 1 | 19 | 111 | 21 | 112 | 9.70e-15 | 74.7 |
| MS.gene043702.t1 | MTR_1g021350 | 25.163 | 306 | 178 | 11 | 19 | 287 | 20 | 311 | 3.87e-14 | 72.8 |
| MS.gene043702.t1 | MTR_1g035470 | 35.385 | 130 | 69 | 5 | 36 | 165 | 1 | 115 | 4.32e-14 | 68.9 |
| MS.gene043702.t1 | MTR_1g021380 | 28.161 | 174 | 99 | 3 | 19 | 192 | 20 | 167 | 8.95e-14 | 71.6 |
| MS.gene043702.t1 | MTR_1g021290 | 23.596 | 267 | 143 | 8 | 19 | 283 | 26 | 233 | 1.96e-11 | 64.7 |
| MS.gene043702.t1 | MTR_1g021290 | 27.027 | 148 | 102 | 3 | 20 | 164 | 156 | 300 | 2.73e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043702.t1 | AT3G18990 | 29.155 | 343 | 173 | 10 | 21 | 302 | 6 | 339 | 3.84e-33 | 126 |
| MS.gene043702.t1 | AT3G18990 | 29.118 | 340 | 171 | 10 | 21 | 299 | 6 | 336 | 4.10e-33 | 125 |
| MS.gene043702.t1 | AT1G49475 | 44.118 | 102 | 56 | 1 | 21 | 122 | 34 | 134 | 2.56e-22 | 92.8 |
| MS.gene043702.t1 | AT4G01580 | 42.308 | 104 | 60 | 0 | 21 | 124 | 30 | 133 | 4.14e-22 | 92.0 |
| MS.gene043702.t1 | AT3G18960 | 40.385 | 104 | 62 | 0 | 21 | 124 | 30 | 133 | 1.94e-20 | 87.8 |
| MS.gene043702.t1 | AT3G18960 | 40.385 | 104 | 62 | 0 | 21 | 124 | 30 | 133 | 2.19e-20 | 88.2 |
| MS.gene043702.t1 | AT3G18960 | 44.318 | 88 | 49 | 0 | 37 | 124 | 9 | 96 | 8.18e-18 | 80.1 |
| MS.gene043702.t1 | AT5G18090 | 22.260 | 292 | 188 | 11 | 21 | 289 | 18 | 293 | 2.99e-11 | 63.5 |
Find 50 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTAAAATGTGGTCCTTTA+AGG | 0.142813 | 7.4:-52548076 | None:intergenic |
| TGCAAAGTGGAAATTAAATT+TGG | 0.244297 | 7.4:+52546720 | MS.gene043702:CDS |
| CTACTCAGCATGACCCTTAA+AGG | 0.253074 | 7.4:+52548062 | MS.gene043702:CDS |
| CCAAAGAGTTGCAGCTAAAA+TGG | 0.273442 | 7.4:+52546903 | MS.gene043702:CDS |
| GAGAGGAGATGTTTATTTGC+AGG | 0.289134 | 7.4:+52548007 | MS.gene043702:CDS |
| TTGCATCAACCATGTGAAAT+TGG | 0.298517 | 7.4:+52546967 | MS.gene043702:CDS |
| GAAAGGATAATTTATCTCTA+AGG | 0.312559 | 7.4:-52546881 | None:intergenic |
| AATTTCCACTTTGCACCATT+TGG | 0.355722 | 7.4:-52546712 | None:intergenic |
| TGGCAAGATATGGTTTGAAA+AGG | 0.397012 | 7.4:+52546753 | MS.gene043702:CDS |
| AGGTGTTAAATGAAGGAGTT+TGG | 0.403488 | 7.4:+52548027 | MS.gene043702:CDS |
| TAAATAGTAATGGCAAGATA+TGG | 0.409496 | 7.4:+52546743 | MS.gene043702:CDS |
| CAGAATATACCACGTATGTT+TGG | 0.412403 | 7.4:+52547957 | MS.gene043702:intron |
| GGCAAGATATGGTTTGAAAA+GGG | 0.412957 | 7.4:+52546754 | MS.gene043702:CDS |
| GAGAAGCTTCTTCTTTCAAT+CGG | 0.428772 | 7.4:-52548341 | None:intergenic |
| TCTAAAATGTGGTCCTTTAA+GGG | 0.428812 | 7.4:-52548075 | None:intergenic |
| CTCACTCATGGCTAGTGAAA+TGG | 0.441955 | 7.4:+52545695 | MS.gene043702:CDS |
| ATGCTGAGTAGGTACGTTGC+AGG | 0.447967 | 7.4:-52548050 | None:intergenic |
| GCAGCTAAAATGGTCTCTAA+TGG | 0.456051 | 7.4:+52546913 | MS.gene043702:CDS |
| TTAAATTTGGTAAATAGTAA+TGG | 0.463066 | 7.4:+52546733 | MS.gene043702:CDS |
| GAAGAAGCTTCTCAAGGATA+AGG | 0.472251 | 7.4:+52548351 | MS.gene043702:CDS |
| TATTTGCAGGTGTTAAATGA+AGG | 0.472581 | 7.4:+52548020 | MS.gene043702:CDS |
| GAGGACAATAACTTGAAAGT+TGG | 0.475501 | 7.4:+52548125 | MS.gene043702:CDS |
| AGATATGGTTTGAAAAGGGT+TGG | 0.475702 | 7.4:+52546758 | MS.gene043702:CDS |
| TGAAGTTGAGAAATTGCAAA+AGG | 0.487851 | 7.4:+52547005 | MS.gene043702:CDS |
| AGAAGCTTCTTCTTTCAATC+GGG | 0.491592 | 7.4:-52548340 | None:intergenic |
| ATATATCTAAAGACTCCAAA+TGG | 0.494837 | 7.4:+52546697 | MS.gene043702:CDS |
| CTCTCTTCTTATCCAACTCA+AGG | 0.506333 | 7.4:-52547989 | None:intergenic |
| TCTAAAGATGTGAACAATGA+AGG | 0.509907 | 7.4:-52548189 | None:intergenic |
| TCTAGCTCATGGCCATCTTG+TGG | 0.528707 | 7.4:+52546804 | MS.gene043702:CDS |
| TTAGCTGCAACTCTTTGGAA+AGG | 0.537642 | 7.4:-52546898 | None:intergenic |
| CTTTAAGGGTCATGCTGAGT+AGG | 0.538680 | 7.4:-52548061 | None:intergenic |
| CCATGTGAAATTGGAAGCAA+TGG | 0.548448 | 7.4:+52546976 | MS.gene043702:CDS |
| CATATCTGAAAACCACAAGA+TGG | 0.550531 | 7.4:-52546816 | None:intergenic |
| CCATTGCTTCCAATTTCACA+TGG | 0.551517 | 7.4:-52546976 | None:intergenic |
| TAGACTCTCAGGTGGATGGA+AGG | 0.562253 | 7.4:+52548094 | MS.gene043702:CDS |
| TGCATGACAACAACAAAGGA+TGG | 0.566700 | 7.4:-52547419 | None:intergenic |
| CGTACTCAAAATCTTCATGA+AGG | 0.572908 | 7.4:+52545747 | MS.gene043702:CDS |
| GAGCATCACTCTCTAGCTCA+TGG | 0.577825 | 7.4:+52546793 | MS.gene043702:CDS |
| TTTGTGGAGAAATATGGAGA+AGG | 0.578281 | 7.4:+52546661 | MS.gene043702:CDS |
| TGGAACTTACCAGAACAAAA+CGG | 0.582937 | 7.4:-52547460 | None:intergenic |
| TGGTTGATGCAATTCAAAAG+AGG | 0.607778 | 7.4:-52546956 | None:intergenic |
| AGACTCCAAATGGTGCAAAG+TGG | 0.616755 | 7.4:+52546707 | MS.gene043702:CDS |
| TTGAAAGAAGAAGCTTCTCA+AGG | 0.617350 | 7.4:+52548345 | MS.gene043702:CDS |
| TGGTAATAGACACCTTGAGT+TGG | 0.617534 | 7.4:+52547977 | MS.gene043702:CDS |
| CTTGAGTTGGATAAGAAGAG+AGG | 0.623819 | 7.4:+52547990 | MS.gene043702:CDS |
| TAGCACGGAGTACTCACTCA+TGG | 0.632921 | 7.4:+52545683 | MS.gene043702:intron |
| CATGCTGACAGTGAGTCCAA+AGG | 0.661277 | 7.4:+52547042 | MS.gene043702:CDS |
| CCACCTGAGAGTCTAAAATG+TGG | 0.688979 | 7.4:-52548086 | None:intergenic |
| TGCATGCATGACAACAACAA+AGG | 0.742589 | 7.4:-52547423 | None:intergenic |
| TGTCTATTACCAAACATACG+TGG | 0.746142 | 7.4:-52547966 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTTAATTAATGAAGTATA+TGG | - | chr7.4:52544959-52544978 | None:intergenic | 10.0% |
| !!! | TTATTTCTTAAACATTTAAA+TGG | + | chr7.4:52547268-52547287 | MS.gene043702:intron | 10.0% |
| !! | AAATGTGATCAAATTTATTA+TGG | + | chr7.4:52544697-52544716 | MS.gene043702:intron | 15.0% |
| !! | AGAAACATTAAAAAAACTAT+GGG | + | chr7.4:52546460-52546479 | MS.gene043702:intron | 15.0% |
| !! | ATAAAATAAAAAAATGGAGA+AGG | - | chr7.4:52547252-52547271 | None:intergenic | 15.0% |
| !! | GGTTATTAAAAAAAAATTGT+TGG | - | chr7.4:52544813-52544832 | None:intergenic | 15.0% |
| !! | TACTTAATATAGTTATAAGA+GGG | - | chr7.4:52544881-52544900 | None:intergenic | 15.0% |
| !! | TTAAATTTGGTAAATAGTAA+TGG | + | chr7.4:52546733-52546752 | MS.gene043702:CDS | 15.0% |
| !! | TTACTTAATATAGTTATAAG+AGG | - | chr7.4:52544882-52544901 | None:intergenic | 15.0% |
| !!! | AAAGTATATTTTATTATGGA+AGG | + | chr7.4:52544743-52544762 | MS.gene043702:intron | 15.0% |
| !!! | TATTTTTTTATAATAGTGAC+CGG | + | chr7.4:52545019-52545038 | MS.gene043702:intron | 15.0% |
| !!! | TGAATCATAGATTTTTTTTT+TGG | + | chr7.4:52545061-52545080 | MS.gene043702:intron | 15.0% |
| !!! | TTAAACTAGTCTTATAAAAA+GGG | + | chr7.4:52544842-52544861 | MS.gene043702:intron | 15.0% |
| !!! | TTTAAACTAGTCTTATAAAA+AGG | + | chr7.4:52544841-52544860 | MS.gene043702:intron | 15.0% |
| !!! | TTTTTTTAATGTTTCTCTTT+AGG | - | chr7.4:52546456-52546475 | None:intergenic | 15.0% |
| !! | AAGAAAAGAATTGAAGTAAA+AGG | - | chr7.4:52545785-52545804 | None:intergenic | 20.0% |
| !! | ACTATCATATGCATATTTAT+AGG | - | chr7.4:52546351-52546370 | None:intergenic | 20.0% |
| !! | CTATCATATGCATATTTATA+GGG | - | chr7.4:52546350-52546369 | None:intergenic | 20.0% |
| !! | GAGAAACATTAAAAAAACTA+TGG | + | chr7.4:52546459-52546478 | MS.gene043702:intron | 20.0% |
| !! | TAATTAAAGAAAAATGCACA+TGG | + | chr7.4:52546152-52546171 | MS.gene043702:intron | 20.0% |
| !! | TGAAAACTAAGTTATTATTG+TGG | + | chr7.4:52546549-52546568 | MS.gene043702:intron | 20.0% |
| !! | TTATATCATGCATACTAATT+TGG | + | chr7.4:52546609-52546628 | MS.gene043702:intron | 20.0% |
| !! | TTTACTTAATAATGTGATCA+TGG | - | chr7.4:52544678-52544697 | None:intergenic | 20.0% |
| !!! | AATAACTTAGTTTTCAAATC+TGG | - | chr7.4:52546545-52546564 | None:intergenic | 20.0% |
| !!! | AGACTAGTTTAAAAAATTCA+CGG | - | chr7.4:52544834-52544853 | None:intergenic | 20.0% |
| !!! | AGTTGTGATTTTTTTTTTTG+AGG | + | chr7.4:52545433-52545452 | MS.gene043702:intron | 20.0% |
| !!! | ATTTGTCTTTTCTTTTTGTT+TGG | + | chr7.4:52547934-52547953 | MS.gene043702:intron | 20.0% |
| !!! | ATTTGTTTTTCATAGTTTGT+GGG | + | chr7.4:52545927-52545946 | MS.gene043702:intron | 20.0% |
| !!! | GCATTTGAGTTTTATATTTA+AGG | + | chr7.4:52546181-52546200 | MS.gene043702:intron | 20.0% |
| !!! | GTTGTGATTTTTTTTTTTGA+GGG | + | chr7.4:52545434-52545453 | MS.gene043702:intron | 20.0% |
| !!! | TAATACATATTTTCTGATCA+TGG | + | chr7.4:52547654-52547673 | MS.gene043702:intron | 20.0% |
| !!! | TAATTTGGTTTAATTATGAC+AGG | + | chr7.4:52546624-52546643 | MS.gene043702:intron | 20.0% |
| !!! | TCATAGATTTTTTTTTTGGA+AGG | + | chr7.4:52545065-52545084 | MS.gene043702:intron | 20.0% |
| !!! | TTGTGATTTTTTTTTTTGAG+GGG | + | chr7.4:52545435-52545454 | MS.gene043702:intron | 20.0% |
| ! | AAAAAGTTTGTGGAGAAATA+TGG | + | chr7.4:52546655-52546674 | MS.gene043702:CDS | 25.0% |
| ! | ATATATCTAAAGACTCCAAA+TGG | + | chr7.4:52546697-52546716 | MS.gene043702:CDS | 25.0% |
| ! | ATATTAATGCCAATTAACAG+GGG | + | chr7.4:52546124-52546143 | MS.gene043702:intron | 25.0% |
| ! | ATCATCACATAGATGTTTAT+TGG | + | chr7.4:52547794-52547813 | MS.gene043702:intron | 25.0% |
| ! | ATGCATACATATTCTCTAAT+TGG | - | chr7.4:52547550-52547569 | None:intergenic | 25.0% |
| ! | ATTATAAATCCCCTGTTAAT+TGG | - | chr7.4:52546136-52546155 | None:intergenic | 25.0% |
| ! | ATTTGTAGCTTAATGATACT+AGG | + | chr7.4:52546289-52546308 | MS.gene043702:intron | 25.0% |
| ! | GAAAGGATAATTTATCTCTA+AGG | - | chr7.4:52546884-52546903 | None:intergenic | 25.0% |
| ! | GATATTAATGCCAATTAACA+GGG | + | chr7.4:52546123-52546142 | MS.gene043702:intron | 25.0% |
| ! | GTAGTTCGAAATTTATTGTT+TGG | - | chr7.4:52545561-52545580 | None:intergenic | 25.0% |
| ! | GTATCATTAAGCTACAAATT+TGG | - | chr7.4:52546288-52546307 | None:intergenic | 25.0% |
| ! | TAAATAGTAATGGCAAGATA+TGG | + | chr7.4:52546743-52546762 | MS.gene043702:CDS | 25.0% |
| ! | TCTATGTGATGATATCATAA+TGG | - | chr7.4:52547787-52547806 | None:intergenic | 25.0% |
| ! | TGATATTAATGCCAATTAAC+AGG | + | chr7.4:52546122-52546141 | MS.gene043702:intron | 25.0% |
| ! | TGCAAAATTTGAACACAATA+AGG | - | chr7.4:52547330-52547349 | None:intergenic | 25.0% |
| ! | TGCAAAGTGGAAATTAAATT+TGG | + | chr7.4:52546720-52546739 | MS.gene043702:CDS | 25.0% |
| ! | TGCATATGATAGTTATCTAT+TGG | + | chr7.4:52546358-52546377 | MS.gene043702:intron | 25.0% |
| ! | TGTTAGTAGTTAATTAGTAG+AGG | + | chr7.4:52547601-52547620 | MS.gene043702:intron | 25.0% |
| ! | TTTGTAGCTTAATGATACTA+GGG | + | chr7.4:52546290-52546309 | MS.gene043702:intron | 25.0% |
| !! | TGAAAAAACTTCTCTTTTTG+AGG | + | chr7.4:52546837-52546856 | MS.gene043702:CDS | 25.0% |
| !! | TGTAATTAAGAATTCGAGTT+TGG | + | chr7.4:52546230-52546249 | MS.gene043702:intron | 25.0% |
| !! | TTATTGTGTTCAAATTTTGC+AGG | + | chr7.4:52547329-52547348 | MS.gene043702:intron | 25.0% |
| !!! | AAGTGTTATATTGATTTCTG+TGG | - | chr7.4:52545406-52545425 | None:intergenic | 25.0% |
| !!! | CTATTGGATGTACTTTTTTT+GGG | + | chr7.4:52546374-52546393 | MS.gene043702:intron | 25.0% |
| !!! | GATTTGTTTTTCATAGTTTG+TGG | + | chr7.4:52545926-52545945 | MS.gene043702:intron | 25.0% |
| !!! | GCTTTTAGAAAATAAGTTGA+TGG | + | chr7.4:52547495-52547514 | MS.gene043702:intron | 25.0% |
| !!! | TATTTCTCCACAAACTTTTT+TGG | - | chr7.4:52546655-52546674 | None:intergenic | 25.0% |
| !!! | TCTATTGGATGTACTTTTTT+TGG | + | chr7.4:52546373-52546392 | MS.gene043702:intron | 25.0% |
| AACCCAAGTTAATTACTTTC+TGG | - | chr7.4:52546065-52546084 | None:intergenic | 30.0% | |
| AACCCAGAAAGTAATTAACT+TGG | + | chr7.4:52546059-52546078 | MS.gene043702:intron | 30.0% | |
| AAGACACAATCTTATACCTT+TGG | - | chr7.4:52547061-52547080 | None:intergenic | 30.0% | |
| AAGTTAATTACTTTCTGGGT+TGG | - | chr7.4:52546060-52546079 | None:intergenic | 30.0% | |
| ACATTAAAAAAACTATGGGC+TGG | + | chr7.4:52546464-52546483 | MS.gene043702:intron | 30.0% | |
| ACCCAAGTTAATTACTTTCT+GGG | - | chr7.4:52546064-52546083 | None:intergenic | 30.0% | |
| ACCCAGAAAGTAATTAACTT+GGG | + | chr7.4:52546060-52546079 | MS.gene043702:intron | 30.0% | |
| ATGGTCTTTACTAGATTAAG+GGG | + | chr7.4:52547514-52547533 | MS.gene043702:intron | 30.0% | |
| ATTTAAGAACAGAGTAACTC+AGG | + | chr7.4:52545522-52545541 | MS.gene043702:intron | 30.0% | |
| CTAAAAGCCAAATGTTTCTT+TGG | - | chr7.4:52547483-52547502 | None:intergenic | 30.0% | |
| GAAATGAAACCCACATAAAT+TGG | - | chr7.4:52545314-52545333 | None:intergenic | 30.0% | |
| GAATATGTATGCATCAACTA+AGG | + | chr7.4:52547556-52547575 | MS.gene043702:intron | 30.0% | |
| GATGGTCTTTACTAGATTAA+GGG | + | chr7.4:52547513-52547532 | MS.gene043702:intron | 30.0% | |
| GTAAGTTCCAAAGAAACATT+TGG | + | chr7.4:52547473-52547492 | MS.gene043702:intron | 30.0% | |
| TACGTATGATCTTGAAAAAG+TGG | - | chr7.4:52545731-52545750 | None:intergenic | 30.0% | |
| TAGATGACAATGACAGTTAA+GGG | - | chr7.4:52545656-52545675 | None:intergenic | 30.0% | |
| TATGATTTAGAAACCCACTT+GGG | - | chr7.4:52545187-52545206 | None:intergenic | 30.0% | |
| TATGTCACACCAATTTATGT+GGG | + | chr7.4:52545302-52545321 | MS.gene043702:intron | 30.0% | |
| TATTTGCAGGTGTTAAATGA+AGG | + | chr7.4:52548020-52548039 | MS.gene043702:CDS | 30.0% | |
| TCAAGATTATCAGAAGAAAG+AGG | - | chr7.4:52544618-52544637 | None:intergenic | 30.0% | |
| TCATTAAGCTACAAATTTGG+TGG | - | chr7.4:52546285-52546304 | None:intergenic | 30.0% | |
| TCTAAAGATGTGAACAATGA+AGG | - | chr7.4:52548192-52548211 | None:intergenic | 30.0% | |
| TGAAGTTGAGAAATTGCAAA+AGG | + | chr7.4:52547005-52547024 | MS.gene043702:CDS | 30.0% | |
| TGATGGTCTTTACTAGATTA+AGG | + | chr7.4:52547512-52547531 | MS.gene043702:intron | 30.0% | |
| TGTTCTACAATAACTCTGAA+GGG | - | chr7.4:52547193-52547212 | None:intergenic | 30.0% | |
| TTAGATGACAATGACAGTTA+AGG | - | chr7.4:52545657-52545676 | None:intergenic | 30.0% | |
| TTATTGGGTGAAATCAATGT+AGG | - | chr7.4:52545349-52545368 | None:intergenic | 30.0% | |
| TTTAAGAACAGAGTAACTCA+GGG | + | chr7.4:52545523-52545542 | MS.gene043702:intron | 30.0% | |
| ! | AGTAATTAACTTGGGTTAGA+TGG | + | chr7.4:52546068-52546087 | MS.gene043702:intron | 30.0% |
| ! | CTAACACTCACTCTTTTATT+GGG | + | chr7.4:52545268-52545287 | MS.gene043702:intron | 30.0% |
| ! | TCTAAAATGTGGTCCTTTAA+GGG | - | chr7.4:52548078-52548097 | None:intergenic | 30.0% |
| ! | TCTAACACTCACTCTTTTAT+TGG | + | chr7.4:52545267-52545286 | MS.gene043702:intron | 30.0% |
| !! | AGATGTTGAACACTTTTTGT+TGG | - | chr7.4:52548228-52548247 | None:intergenic | 30.0% |
| !!! | CAAGTTTTTTTCTTCAAAGG+AGG | + | chr7.4:52546205-52546224 | MS.gene043702:intron | 30.0% |
| !!! | GGACAAGTTTTTTTCTTCAA+AGG | + | chr7.4:52546202-52546221 | MS.gene043702:intron | 30.0% |
| AATTTCCACTTTGCACCATT+TGG | - | chr7.4:52546715-52546734 | None:intergenic | 35.0% | |
| AGAAGCTTCTTCTTTCAATC+GGG | - | chr7.4:52548343-52548362 | None:intergenic | 35.0% | |
| AGATATGGTTTGAAAAGGGT+TGG | + | chr7.4:52546758-52546777 | MS.gene043702:CDS | 35.0% | |
| AGATGACAATGACAGTTAAG+GGG | - | chr7.4:52545655-52545674 | None:intergenic | 35.0% | |
| AGGTGTTAAATGAAGGAGTT+TGG | + | chr7.4:52548027-52548046 | MS.gene043702:CDS | 35.0% | |
| AGTGTTCAACATCTCAAAGT+AGG | + | chr7.4:52548234-52548253 | MS.gene043702:intron | 35.0% | |
| CAGAATATACCACGTATGTT+TGG | + | chr7.4:52547957-52547976 | MS.gene043702:intron | 35.0% | |
| CATATCTGAAAACCACAAGA+TGG | - | chr7.4:52546819-52546838 | None:intergenic | 35.0% | |
| CGTACTCAAAATCTTCATGA+AGG | + | chr7.4:52545747-52545766 | MS.gene043702:CDS | 35.0% | |
| CTAAATTTGCCCACCTAAAT+TGG | + | chr7.4:52545090-52545109 | MS.gene043702:intron | 35.0% | |
| CTATGATTTAGAAACCCACT+TGG | - | chr7.4:52545188-52545207 | None:intergenic | 35.0% | |
| CTGTTCTACAATAACTCTGA+AGG | - | chr7.4:52547194-52547213 | None:intergenic | 35.0% | |
| GAGAAGCTTCTTCTTTCAAT+CGG | - | chr7.4:52548344-52548363 | None:intergenic | 35.0% | |
| GAGGACAATAACTTGAAAGT+TGG | + | chr7.4:52548125-52548144 | MS.gene043702:CDS | 35.0% | |
| GAGGAGAGAATTTAAGTGAA+AGG | - | chr7.4:52544599-52544618 | None:intergenic | 35.0% | |
| GATAGAGAAAGAAATCAACG+AGG | + | chr7.4:52545212-52545231 | MS.gene043702:intron | 35.0% | |
| GATTTCAGACATACATCTTC+CGG | - | chr7.4:52545041-52545060 | None:intergenic | 35.0% | |
| GGCAAGATATGGTTTGAAAA+GGG | + | chr7.4:52546754-52546773 | MS.gene043702:CDS | 35.0% | |
| GGTGATACCAAAAAAGTTTG+TGG | + | chr7.4:52546645-52546664 | MS.gene043702:intron | 35.0% | |
| GTATGTCACACCAATTTATG+TGG | + | chr7.4:52545301-52545320 | MS.gene043702:intron | 35.0% | |
| GTCATCTAAACTTCATAGCA+CGG | + | chr7.4:52545668-52545687 | MS.gene043702:intron | 35.0% | |
| TATTTCCCATTGATACCAGT+TGG | + | chr7.4:52547710-52547729 | MS.gene043702:intron | 35.0% | |
| TGGAACTTACCAGAACAAAA+CGG | - | chr7.4:52547463-52547482 | None:intergenic | 35.0% | |
| TGGCAAGATATGGTTTGAAA+AGG | + | chr7.4:52546753-52546772 | MS.gene043702:CDS | 35.0% | |
| TGTCTATTACCAAACATACG+TGG | - | chr7.4:52547969-52547988 | None:intergenic | 35.0% | |
| TTAGCGACATAAATGAGTAG+AGG | - | chr7.4:52545965-52545984 | None:intergenic | 35.0% | |
| TTATGTCGCTAATGTCTTCA+TGG | + | chr7.4:52545973-52545992 | MS.gene043702:intron | 35.0% | |
| TTCGTTCAATGATGTATCGA+TGG | + | chr7.4:52547154-52547173 | MS.gene043702:intron | 35.0% | |
| TTGAAAGAAGAAGCTTCTCA+AGG | + | chr7.4:52548345-52548364 | MS.gene043702:CDS | 35.0% | |
| TTGCATCAACCATGTGAAAT+TGG | + | chr7.4:52546967-52546986 | MS.gene043702:CDS | 35.0% | |
| TTTGTGGAGAAATATGGAGA+AGG | + | chr7.4:52546661-52546680 | MS.gene043702:CDS | 35.0% | |
| ! | CTAGCACTCACTCTTTTATT+GGG | - | chr7.4:52545364-52545383 | None:intergenic | 35.0% |
| ! | GTCTAAAATGTGGTCCTTTA+AGG | - | chr7.4:52548079-52548098 | None:intergenic | 35.0% |
| ! | TCTAGCACTCACTCTTTTAT+TGG | - | chr7.4:52545365-52545384 | None:intergenic | 35.0% |
| ! | TGGTTGATGCAATTCAAAAG+AGG | - | chr7.4:52546959-52546978 | None:intergenic | 35.0% |
| !! | ACTTAGTTTTCAAATCTGGC+CGG | - | chr7.4:52546541-52546560 | None:intergenic | 35.0% |
| !! | GTTTTTCATAGTTTGTGGGT+TGG | + | chr7.4:52545931-52545950 | MS.gene043702:intron | 35.0% |
| !!! | TGTGACACTGTTTTGTTTTG+TGG | - | chr7.4:52545586-52545605 | None:intergenic | 35.0% |
| AAAGAGTGAGTGTTAGAGAG+AGG | - | chr7.4:52545264-52545283 | None:intergenic | 40.0% | |
| AAATTGCACAGCTCAAATGG+AGG | + | chr7.4:52547747-52547766 | MS.gene043702:intron | 40.0% | |
| AAGAGTGAGTGTTAGAGAGA+GGG | - | chr7.4:52545263-52545282 | None:intergenic | 40.0% | |
| AAGGACCAACTGGTATCAAT+GGG | - | chr7.4:52547718-52547737 | None:intergenic | 40.0% | |
| AATTGCACAGCTCAAATGGA+GGG | + | chr7.4:52547748-52547767 | MS.gene043702:intron | 40.0% | |
| AGAAGCCTTGAACTTTAGTC+AGG | + | chr7.4:52545471-52545490 | MS.gene043702:intron | 40.0% | |
| AGAGTAACTCAGGGTAGTAT+GGG | + | chr7.4:52545532-52545551 | MS.gene043702:intron | 40.0% | |
| ATAGGGCCTTAGAGATATTG+AGG | - | chr7.4:52546333-52546352 | None:intergenic | 40.0% | |
| ATCCACCTGACTAAAGTTCA+AGG | - | chr7.4:52545479-52545498 | None:intergenic | 40.0% | |
| ATTCTCCACAGTGCCAATTT+AGG | - | chr7.4:52545106-52545125 | None:intergenic | 40.0% | |
| ATTTAGAAACCCACTTGGGT+TGG | - | chr7.4:52545183-52545202 | None:intergenic | 40.0% | |
| CCAAAGAGTTGCAGCTAAAA+TGG | + | chr7.4:52546903-52546922 | MS.gene043702:CDS | 40.0% | |
| CCATGTGAAATTGGAAGCAA+TGG | + | chr7.4:52546976-52546995 | MS.gene043702:CDS | 40.0% | |
| CCATTGCTTCCAATTTCACA+TGG | - | chr7.4:52546979-52546998 | None:intergenic | 40.0% | |
| CGAAAATTGCACAGCTCAAA+TGG | + | chr7.4:52547744-52547763 | MS.gene043702:intron | 40.0% | |
| CTAATCCGGTAGTTATCTAC+CGG | - | chr7.4:52546411-52546430 | None:intergenic | 40.0% | |
| CTCTCTTCTTATCCAACTCA+AGG | - | chr7.4:52547992-52548011 | None:intergenic | 40.0% | |
| GACTAAAGTTCAAGGCTTCT+TGG | - | chr7.4:52545471-52545490 | None:intergenic | 40.0% | |
| GAGAGGAGATGTTTATTTGC+AGG | + | chr7.4:52548007-52548026 | MS.gene043702:CDS | 40.0% | |
| GCAGCTAAAATGGTCTCTAA+TGG | + | chr7.4:52546913-52546932 | MS.gene043702:CDS | 40.0% | |
| GGGTTTCATTTCCAAAGTGT+AGG | + | chr7.4:52545322-52545341 | MS.gene043702:intron | 40.0% | |
| GGTAGATAACTACCGGATTA+GGG | + | chr7.4:52546410-52546429 | MS.gene043702:intron | 40.0% | |
| TAGGGCCTTAGAGATATTGA+GGG | - | chr7.4:52546332-52546351 | None:intergenic | 40.0% | |
| TAGGGGGAGTTAGTGATATT+GGG | + | chr7.4:52546428-52546447 | MS.gene043702:intron | 40.0% | |
| TCAATGTAGGACCTACACTT+TGG | - | chr7.4:52545336-52545355 | None:intergenic | 40.0% | |
| TGCAGCCTGTTTACTCAATT+AGG | + | chr7.4:52546487-52546506 | MS.gene043702:intron | 40.0% | |
| TGCATGACAACAACAAAGGA+TGG | - | chr7.4:52547422-52547441 | None:intergenic | 40.0% | |
| TGCATGCATGACAACAACAA+AGG | - | chr7.4:52547426-52547445 | None:intergenic | 40.0% | |
| TGGTAATAGACACCTTGAGT+TGG | + | chr7.4:52547977-52547996 | MS.gene043702:CDS | 40.0% | |
| TTAGGGGGAGTTAGTGATAT+TGG | + | chr7.4:52546427-52546446 | MS.gene043702:intron | 40.0% | |
| TTTACTCAATTAGGCCCACT+TGG | + | chr7.4:52546496-52546515 | MS.gene043702:intron | 40.0% | |
| ! | ATACTAGGGCGTTTCTCTTT+AGG | + | chr7.4:52546304-52546323 | MS.gene043702:intron | 40.0% |
| ! | ATGGAAGGAGTATGTGACTA+TGG | + | chr7.4:52544758-52544777 | MS.gene043702:intron | 40.0% |
| ! | ATTTTAGACTCTCAGGTGGA+TGG | + | chr7.4:52548090-52548109 | MS.gene043702:CDS | 40.0% |
| ! | GTAGATAACTACCGGATTAG+GGG | + | chr7.4:52546411-52546430 | MS.gene043702:intron | 40.0% |
| ! | TAGATAACTACCGGATTAGG+GGG | + | chr7.4:52546412-52546431 | MS.gene043702:intron | 40.0% |
| ! | TGTGCAATTTTCGCTCAACA+AGG | - | chr7.4:52547737-52547756 | None:intergenic | 40.0% |
| ! | TTAGCTGCAACTCTTTGGAA+AGG | - | chr7.4:52546901-52546920 | None:intergenic | 40.0% |
| !! | CGTTAAACACCGTTTTGTTC+TGG | + | chr7.4:52547451-52547470 | MS.gene043702:CDS | 40.0% |
| !! | CTTGAGTTGGATAAGAAGAG+AGG | + | chr7.4:52547990-52548009 | MS.gene043702:CDS | 40.0% |
| !! | TTGGCTTGGACAAGTTAGTT+CGG | + | chr7.4:52546515-52546534 | MS.gene043702:intron | 40.0% |
| !! | TTTTTGGGAAAACGCACATC+CGG | + | chr7.4:52546389-52546408 | MS.gene043702:intron | 40.0% |
| !!! | CCATTTTAGCTGCAACTCTT+TGG | - | chr7.4:52546906-52546925 | None:intergenic | 40.0% |
| AGACTCCAAATGGTGCAAAG+TGG | + | chr7.4:52546707-52546726 | MS.gene043702:CDS | 45.0% | |
| AGCCTTGAACTTTAGTCAGG+TGG | + | chr7.4:52545474-52545493 | MS.gene043702:intron | 45.0% | |
| AGGGCCTTAGAGATATTGAG+GGG | - | chr7.4:52546331-52546350 | None:intergenic | 45.0% | |
| AGGGGGAGTTAGTGATATTG+GGG | + | chr7.4:52546429-52546448 | MS.gene043702:intron | 45.0% | |
| ATCACTAACTCCCCCTAATC+CGG | - | chr7.4:52546425-52546444 | None:intergenic | 45.0% | |
| CAAGGACCAACTGGTATCAA+TGG | - | chr7.4:52547719-52547738 | None:intergenic | 45.0% | |
| CACATCCGGTAGATAACTAC+CGG | + | chr7.4:52546403-52546422 | MS.gene043702:intron | 45.0% | |
| CAGAGTAACTCAGGGTAGTA+TGG | + | chr7.4:52545531-52545550 | MS.gene043702:intron | 45.0% | |
| CGGTAGATAACTACCGGATT+AGG | + | chr7.4:52546409-52546428 | MS.gene043702:intron | 45.0% | |
| CTACTCAGCATGACCCTTAA+AGG | + | chr7.4:52548062-52548081 | MS.gene043702:CDS | 45.0% | |
| CTCACTCATGGCTAGTGAAA+TGG | + | chr7.4:52545695-52545714 | MS.gene043702:CDS | 45.0% | |
| GAATCGAACCTGAGATCTCA+AGG | + | chr7.4:52545122-52545141 | MS.gene043702:intron | 45.0% | |
| GTGGGCCTAATTGAGTAAAC+AGG | - | chr7.4:52546495-52546514 | None:intergenic | 45.0% | |
| TCCACAGTGCCAATTTAGGT+GGG | - | chr7.4:52545102-52545121 | None:intergenic | 45.0% | |
| ! | ACTAACTTGTCCAAGCCAAG+TGG | - | chr7.4:52546514-52546533 | None:intergenic | 45.0% |
| ! | CCACATTTTAGACTCTCAGG+TGG | + | chr7.4:52548086-52548105 | MS.gene043702:CDS | 45.0% |
| ! | CCACCTGAGAGTCTAAAATG+TGG | - | chr7.4:52548089-52548108 | None:intergenic | 45.0% |
| ! | CTAACTTGTCCAAGCCAAGT+GGG | - | chr7.4:52546513-52546532 | None:intergenic | 45.0% |
| ! | CTTTAAGGGTCATGCTGAGT+AGG | - | chr7.4:52548064-52548083 | None:intergenic | 45.0% |
| ! | GGACCACATTTTAGACTCTC+AGG | + | chr7.4:52548083-52548102 | MS.gene043702:CDS | 45.0% |
| !! | CTGGTATTGACTTGGGATCT+GGG | - | chr7.4:52545159-52545178 | None:intergenic | 45.0% |
| !!! | TGGATGGAAGGCATTTTCAG+AGG | + | chr7.4:52548106-52548125 | MS.gene043702:CDS | 45.0% |
| !! | AATAAATAAATTGTTAAAAT+TGG | - | chr7.4:52545999-52546018 | None:intergenic | 5.0% |
| !! | TAAGAAATAAAATAAAAAAA+TGG | - | chr7.4:52547258-52547277 | None:intergenic | 5.0% |
| !! | TATATATTATAATAACAAAA+TGG | + | chr7.4:52547829-52547848 | MS.gene043702:intron | 5.0% |
| !!! | ATTAAAAGTATATTTTATTA+TGG | + | chr7.4:52544739-52544758 | MS.gene043702:intron | 5.0% |
| AATACCAGGCCAACCCAAGT+GGG | + | chr7.4:52545171-52545190 | MS.gene043702:intron | 50.0% | |
| AGGCCCCCTCAATATCTCTA+AGG | + | chr7.4:52546324-52546343 | MS.gene043702:intron | 50.0% | |
| ATGCTGAGTAGGTACGTTGC+AGG | - | chr7.4:52548053-52548072 | None:intergenic | 50.0% | |
| CATGCTGACAGTGAGTCCAA+AGG | + | chr7.4:52547042-52547061 | MS.gene043702:CDS | 50.0% | |
| CCAGATCCCAAGTCAATACC+AGG | + | chr7.4:52545157-52545176 | MS.gene043702:intron | 50.0% | |
| CTCCACAGTGCCAATTTAGG+TGG | - | chr7.4:52545103-52545122 | None:intergenic | 50.0% | |
| CTTGGACAAGTTAGTTCGGC+CGG | + | chr7.4:52546519-52546538 | MS.gene043702:intron | 50.0% | |
| GGGCCTTAGAGATATTGAGG+GGG | - | chr7.4:52546330-52546349 | None:intergenic | 50.0% | |
| GGGGGAGTTAGTGATATTGG+GGG | + | chr7.4:52546430-52546449 | MS.gene043702:intron | 50.0% | |
| GTGTTCCTCCTTGAGATCTC+AGG | - | chr7.4:52545133-52545152 | None:intergenic | 50.0% | |
| TAGACTCTCAGGTGGATGGA+AGG | + | chr7.4:52548094-52548113 | MS.gene043702:CDS | 50.0% | |
| TCAATTAGGCCCACTTGGCT+TGG | + | chr7.4:52546501-52546520 | MS.gene043702:intron | 50.0% | |
| TCGAACCTGAGATCTCAAGG+AGG | + | chr7.4:52545125-52545144 | MS.gene043702:intron | 50.0% | |
| TTCGCTCAACAAGGACCAAC+TGG | - | chr7.4:52547728-52547747 | None:intergenic | 50.0% | |
| ! | GAGCATCACTCTCTAGCTCA+TGG | + | chr7.4:52546793-52546812 | MS.gene043702:CDS | 50.0% |
| ! | GTGAGTGCTAGAGAGAGTGT+TGG | + | chr7.4:52545373-52545392 | MS.gene043702:intron | 50.0% |
| ! | TAGCACGGAGTACTCACTCA+TGG | + | chr7.4:52545683-52545702 | MS.gene043702:intron | 50.0% |
| ! | TCTAGCTCATGGCCATCTTG+TGG | + | chr7.4:52546804-52546823 | MS.gene043702:CDS | 50.0% |
| !! | CCTGGTATTGACTTGGGATC+TGG | - | chr7.4:52545160-52545179 | None:intergenic | 50.0% |
| !! | GGTTGGCCTGGTATTGACTT+GGG | - | chr7.4:52545166-52545185 | None:intergenic | 50.0% |
| CAATACCAGGCCAACCCAAG+TGG | + | chr7.4:52545170-52545189 | MS.gene043702:intron | 55.0% | |
| GCCCACCTAAATTGGCACTG+TGG | + | chr7.4:52545098-52545117 | MS.gene043702:intron | 55.0% | |
| !! | GGGTTGGCCTGGTATTGACT+TGG | - | chr7.4:52545167-52545186 | None:intergenic | 55.0% |
| !! | GAAACCCACTTGGGTTGGCC+TGG | - | chr7.4:52545178-52545197 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 52544577 | 52548371 | 52544577 | ID=MS.gene043702 |
| chr7.4 | mRNA | 52544577 | 52548371 | 52544577 | ID=MS.gene043702.t1;Parent=MS.gene043702 |
| chr7.4 | exon | 52544577 | 52544590 | 52544577 | ID=MS.gene043702.t1.exon1;Parent=MS.gene043702.t1 |
| chr7.4 | CDS | 52544577 | 52544590 | 52544577 | ID=cds.MS.gene043702.t1;Parent=MS.gene043702.t1 |
| chr7.4 | exon | 52545686 | 52545776 | 52545686 | ID=MS.gene043702.t1.exon2;Parent=MS.gene043702.t1 |
| chr7.4 | CDS | 52545686 | 52545776 | 52545686 | ID=cds.MS.gene043702.t1;Parent=MS.gene043702.t1 |
| chr7.4 | exon | 52546646 | 52547063 | 52546646 | ID=MS.gene043702.t1.exon3;Parent=MS.gene043702.t1 |
| chr7.4 | CDS | 52546646 | 52547063 | 52546646 | ID=cds.MS.gene043702.t1;Parent=MS.gene043702.t1 |
| chr7.4 | exon | 52547351 | 52547472 | 52547351 | ID=MS.gene043702.t1.exon4;Parent=MS.gene043702.t1 |
| chr7.4 | CDS | 52547351 | 52547472 | 52547351 | ID=cds.MS.gene043702.t1;Parent=MS.gene043702.t1 |
| chr7.4 | exon | 52547960 | 52548251 | 52547960 | ID=MS.gene043702.t1.exon5;Parent=MS.gene043702.t1 |
| chr7.4 | CDS | 52547960 | 52548251 | 52547960 | ID=cds.MS.gene043702.t1;Parent=MS.gene043702.t1 |
| chr7.4 | exon | 52548334 | 52548371 | 52548334 | ID=MS.gene043702.t1.exon6;Parent=MS.gene043702.t1 |
| chr7.4 | CDS | 52548334 | 52548371 | 52548334 | ID=cds.MS.gene043702.t1;Parent=MS.gene043702.t1 |
| Gene Sequence |
| Protein sequence |
