Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043703.t1 | AES73017.1 | 74.8 | 313 | 77 | 2 | 1 | 312 | 1 | 312 | 2.30E-129 | 472.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043703.t1 | Q8L3W1 | 27.7 | 346 | 189 | 7 | 9 | 302 | 3 | 339 | 2.4e-26 | 121.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043703.t1 | G7J3B6 | 74.8 | 313 | 77 | 2 | 1 | 312 | 1 | 312 | 1.7e-129 | 472.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene043703.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043703.t1 | MTR_3g098790 | 74.760 | 313 | 77 | 2 | 1 | 312 | 1 | 312 | 1.47e-170 | 480 |
| MS.gene043703.t1 | MTR_7g050710 | 66.355 | 321 | 98 | 4 | 1 | 312 | 1 | 320 | 2.31e-147 | 421 |
| MS.gene043703.t1 | MTR_7g050580 | 68.471 | 314 | 88 | 4 | 1 | 313 | 1 | 304 | 3.59e-144 | 412 |
| MS.gene043703.t1 | MTR_7g050560 | 63.125 | 320 | 95 | 5 | 1 | 313 | 1 | 304 | 6.06e-135 | 389 |
| MS.gene043703.t1 | MTR_7g050590 | 68.367 | 294 | 83 | 5 | 28 | 312 | 1 | 293 | 3.61e-133 | 384 |
| MS.gene043703.t1 | MTR_7g050720 | 61.371 | 321 | 100 | 10 | 1 | 301 | 1 | 317 | 2.14e-124 | 362 |
| MS.gene043703.t1 | MTR_7g050640 | 80.531 | 113 | 22 | 0 | 1 | 113 | 1 | 113 | 1.42e-60 | 192 |
| MS.gene043703.t1 | MTR_8g103940 | 37.700 | 313 | 155 | 8 | 13 | 302 | 39 | 334 | 3.44e-55 | 189 |
| MS.gene043703.t1 | MTR_1g035460 | 36.601 | 306 | 155 | 7 | 28 | 306 | 1 | 294 | 2.32e-52 | 179 |
| MS.gene043703.t1 | MTR_1g108780 | 35.127 | 316 | 156 | 9 | 29 | 320 | 13 | 303 | 2.51e-49 | 173 |
| MS.gene043703.t1 | MTR_5g044670 | 30.201 | 298 | 187 | 7 | 13 | 299 | 16 | 303 | 8.70e-39 | 142 |
| MS.gene043703.t1 | MTR_3g061320 | 31.488 | 289 | 180 | 7 | 10 | 298 | 9 | 279 | 7.40e-37 | 135 |
| MS.gene043703.t1 | MTR_3g061350 | 30.241 | 291 | 190 | 6 | 8 | 298 | 7 | 284 | 2.53e-35 | 131 |
| MS.gene043703.t1 | MTR_3g061370 | 31.507 | 292 | 179 | 8 | 11 | 298 | 7 | 281 | 2.11e-34 | 129 |
| MS.gene043703.t1 | MTR_1g035620 | 32.119 | 302 | 161 | 9 | 10 | 297 | 6 | 277 | 1.18e-33 | 130 |
| MS.gene043703.t1 | MTR_3g061340 | 30.100 | 299 | 166 | 10 | 10 | 298 | 9 | 274 | 5.98e-33 | 125 |
| MS.gene043703.t1 | MTR_3g061310 | 29.210 | 291 | 190 | 7 | 10 | 298 | 9 | 285 | 1.48e-32 | 124 |
| MS.gene043703.t1 | MTR_6g043890 | 32.394 | 284 | 176 | 7 | 12 | 285 | 14 | 291 | 2.04e-31 | 122 |
| MS.gene043703.t1 | MTR_1g050845 | 31.683 | 303 | 149 | 8 | 10 | 297 | 6 | 265 | 2.12e-30 | 124 |
| MS.gene043703.t1 | MTR_1g035640 | 28.219 | 365 | 224 | 13 | 5 | 360 | 3 | 338 | 9.96e-29 | 117 |
| MS.gene043703.t1 | MTR_3g005490 | 27.304 | 293 | 161 | 6 | 12 | 302 | 20 | 262 | 3.45e-28 | 112 |
| MS.gene043703.t1 | MTR_1g035570 | 30.795 | 302 | 163 | 9 | 22 | 302 | 14 | 290 | 4.15e-26 | 108 |
| MS.gene043703.t1 | MTR_4g119990 | 31.148 | 305 | 185 | 10 | 12 | 298 | 14 | 311 | 1.05e-25 | 107 |
| MS.gene043703.t1 | MTR_3g061330 | 49.020 | 102 | 50 | 1 | 10 | 111 | 9 | 108 | 1.18e-25 | 104 |
| MS.gene043703.t1 | MTR_6g061070 | 29.595 | 321 | 184 | 12 | 8 | 298 | 13 | 321 | 1.80e-25 | 108 |
| MS.gene043703.t1 | MTR_1g021270 | 25.600 | 375 | 207 | 10 | 8 | 323 | 11 | 372 | 2.71e-25 | 108 |
| MS.gene043703.t1 | MTR_1g021400 | 26.074 | 349 | 188 | 9 | 12 | 307 | 29 | 360 | 3.62e-25 | 105 |
| MS.gene043703.t1 | MTR_3g061290 | 49.020 | 102 | 50 | 1 | 10 | 111 | 9 | 108 | 1.93e-24 | 100 |
| MS.gene043703.t1 | MTR_5g070440 | 26.460 | 291 | 169 | 7 | 12 | 299 | 20 | 268 | 6.32e-24 | 100 |
| MS.gene043703.t1 | MTR_3g005480 | 26.087 | 299 | 152 | 6 | 12 | 299 | 20 | 260 | 2.19e-23 | 99.0 |
| MS.gene043703.t1 | MTR_1g034210 | 23.387 | 372 | 202 | 8 | 6 | 304 | 2 | 363 | 2.20e-23 | 100 |
| MS.gene043703.t1 | MTR_1g021360 | 30.233 | 301 | 181 | 9 | 12 | 295 | 178 | 466 | 5.11e-23 | 100 |
| MS.gene043703.t1 | MTR_1g021360 | 38.947 | 95 | 54 | 1 | 12 | 102 | 20 | 114 | 9.28e-12 | 67.0 |
| MS.gene043703.t1 | MTR_1g021380 | 25.806 | 310 | 190 | 7 | 11 | 288 | 20 | 321 | 1.14e-21 | 95.5 |
| MS.gene043703.t1 | MTR_1g021410 | 25.223 | 337 | 189 | 7 | 11 | 298 | 20 | 342 | 1.66e-21 | 95.1 |
| MS.gene043703.t1 | MTR_1g021330 | 24.850 | 334 | 193 | 6 | 11 | 291 | 24 | 352 | 2.50e-21 | 95.1 |
| MS.gene043703.t1 | MTR_3g005460 | 26.599 | 297 | 169 | 9 | 11 | 298 | 260 | 516 | 7.21e-21 | 94.7 |
| MS.gene043703.t1 | MTR_3g005460 | 32.192 | 146 | 94 | 2 | 12 | 157 | 24 | 164 | 3.09e-16 | 80.9 |
| MS.gene043703.t1 | MTR_1g021440 | 26.471 | 340 | 190 | 10 | 11 | 295 | 21 | 355 | 2.10e-20 | 92.4 |
| MS.gene043703.t1 | MTR_3g005420 | 26.531 | 294 | 171 | 9 | 12 | 302 | 288 | 539 | 1.55e-19 | 90.9 |
| MS.gene043703.t1 | MTR_3g005420 | 23.105 | 277 | 149 | 7 | 12 | 286 | 39 | 253 | 1.59e-14 | 75.5 |
| MS.gene043703.t1 | MTR_1g035480 | 37.121 | 132 | 78 | 3 | 8 | 137 | 12 | 140 | 2.49e-19 | 85.5 |
| MS.gene043703.t1 | MTR_1g035520 | 27.759 | 299 | 184 | 9 | 28 | 297 | 87 | 382 | 3.55e-19 | 89.0 |
| MS.gene043703.t1 | MTR_3g005495 | 27.599 | 279 | 147 | 9 | 12 | 290 | 242 | 465 | 7.33e-19 | 88.6 |
| MS.gene043703.t1 | MTR_3g005495 | 32.203 | 118 | 73 | 1 | 29 | 139 | 29 | 146 | 3.23e-15 | 77.4 |
| MS.gene043703.t1 | MTR_1g035650 | 33.010 | 206 | 120 | 6 | 10 | 209 | 6 | 199 | 1.04e-18 | 84.3 |
| MS.gene043703.t1 | MTR_1g033740 | 37.121 | 132 | 79 | 3 | 7 | 137 | 16 | 144 | 3.33e-18 | 82.4 |
| MS.gene043703.t1 | MTR_4g068320 | 40.404 | 99 | 59 | 0 | 13 | 111 | 6 | 104 | 5.16e-18 | 85.9 |
| MS.gene043703.t1 | MTR_4g068320 | 32.061 | 131 | 81 | 4 | 175 | 304 | 270 | 393 | 1.09e-12 | 69.7 |
| MS.gene043703.t1 | MTR_1g034240 | 40.404 | 99 | 59 | 0 | 13 | 111 | 7 | 105 | 1.69e-17 | 84.3 |
| MS.gene043703.t1 | MTR_1g034240 | 32.824 | 131 | 80 | 4 | 175 | 304 | 274 | 397 | 2.07e-13 | 71.6 |
| MS.gene043703.t1 | MTR_1g021350 | 24.262 | 305 | 199 | 8 | 11 | 291 | 19 | 315 | 9.25e-17 | 81.3 |
| MS.gene043703.t1 | MTR_1g035500 | 35.659 | 129 | 78 | 3 | 11 | 137 | 23 | 148 | 1.10e-16 | 78.2 |
| MS.gene043703.t1 | MTR_3g061220 | 40.196 | 102 | 46 | 2 | 10 | 111 | 9 | 95 | 1.87e-16 | 75.5 |
| MS.gene043703.t1 | MTR_3g005440 | 32.787 | 122 | 81 | 1 | 27 | 147 | 34 | 155 | 1.56e-15 | 78.2 |
| MS.gene043703.t1 | MTR_3g005440 | 28.125 | 160 | 110 | 1 | 12 | 171 | 241 | 395 | 2.48e-11 | 65.5 |
| MS.gene043703.t1 | MTR_1g035440 | 41.346 | 104 | 60 | 1 | 12 | 114 | 14 | 117 | 5.57e-15 | 74.7 |
| MS.gene043703.t1 | MTR_3g005420 | 23.105 | 277 | 149 | 7 | 12 | 286 | 20 | 234 | 1.28e-14 | 75.9 |
| MS.gene043703.t1 | MTR_1g021320 | 36.957 | 92 | 58 | 0 | 11 | 102 | 23 | 114 | 3.05e-14 | 75.1 |
| MS.gene043703.t1 | MTR_1g021320 | 38.947 | 95 | 55 | 1 | 12 | 103 | 178 | 272 | 2.48e-13 | 72.4 |
| MS.gene043703.t1 | MTR_1g021440 | 36.957 | 92 | 57 | 1 | 12 | 103 | 22 | 112 | 7.37e-14 | 72.0 |
| MS.gene043703.t1 | MTR_1g021440 | 36.957 | 92 | 57 | 1 | 12 | 103 | 22 | 112 | 8.03e-14 | 72.0 |
| MS.gene043703.t1 | MTR_1g034210 | 36.792 | 106 | 63 | 2 | 6 | 111 | 2 | 103 | 1.15e-13 | 71.6 |
| MS.gene043703.t1 | MTR_1g021440 | 36.559 | 93 | 58 | 1 | 11 | 103 | 21 | 112 | 1.73e-13 | 72.0 |
| MS.gene043703.t1 | MTR_1g098450 | 25.478 | 314 | 174 | 11 | 13 | 302 | 12 | 289 | 2.08e-13 | 70.9 |
| MS.gene043703.t1 | MTR_1g021290 | 35.922 | 103 | 64 | 1 | 5 | 107 | 149 | 249 | 2.12e-13 | 71.2 |
| MS.gene043703.t1 | MTR_1g021290 | 34.146 | 82 | 54 | 0 | 26 | 107 | 40 | 121 | 1.86e-11 | 65.5 |
| MS.gene043703.t1 | MTR_1g035510 | 37.273 | 110 | 66 | 2 | 28 | 137 | 1 | 107 | 3.22e-13 | 68.9 |
| MS.gene043703.t1 | MTR_1g021435 | 33.696 | 92 | 61 | 0 | 12 | 103 | 21 | 112 | 3.25e-12 | 67.8 |
| MS.gene043703.t1 | MTR_1g035470 | 37.838 | 111 | 65 | 3 | 28 | 137 | 1 | 108 | 3.77e-12 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043703.t1 | AT3G18990 | 28.035 | 346 | 188 | 7 | 9 | 302 | 3 | 339 | 1.32e-34 | 131 |
| MS.gene043703.t1 | AT3G18990 | 27.988 | 343 | 186 | 7 | 9 | 299 | 3 | 336 | 3.60e-34 | 130 |
| MS.gene043703.t1 | AT4G33280 | 28.746 | 327 | 184 | 12 | 12 | 307 | 19 | 327 | 1.22e-23 | 100 |
| MS.gene043703.t1 | AT4G01580 | 41.346 | 104 | 61 | 0 | 13 | 116 | 30 | 133 | 1.14e-20 | 89.4 |
| MS.gene043703.t1 | AT1G49475 | 40.000 | 115 | 66 | 2 | 6 | 120 | 29 | 140 | 6.21e-20 | 87.4 |
| MS.gene043703.t1 | AT3G18960 | 40.385 | 104 | 62 | 0 | 13 | 116 | 30 | 133 | 2.71e-19 | 85.9 |
| MS.gene043703.t1 | AT3G18960 | 40.385 | 104 | 62 | 0 | 13 | 116 | 30 | 133 | 2.78e-19 | 85.5 |
| MS.gene043703.t1 | AT3G18960 | 44.318 | 88 | 49 | 0 | 29 | 116 | 9 | 96 | 6.25e-17 | 78.6 |
| MS.gene043703.t1 | AT4G33280 | 38.000 | 100 | 58 | 2 | 12 | 107 | 19 | 118 | 4.91e-12 | 66.6 |
| MS.gene043703.t1 | AT4G33280 | 38.000 | 100 | 58 | 2 | 12 | 107 | 19 | 118 | 5.31e-12 | 67.4 |
Find 56 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTAACTCATCCTTTCAATT+TGG | 0.165706 | 7.4:+52562911 | MS.gene043703:CDS |
| GTCTTTAGATATATAGTATT+TGG | 0.189737 | 7.4:-52562608 | None:intergenic |
| GTTGTTAACATTTCTTTATC+TGG | 0.208752 | 7.4:-52566788 | None:intergenic |
| TATTTCTCTACAAACTTTCT+TGG | 0.216984 | 7.4:-52562572 | None:intergenic |
| CAAAAGAGTTGAAGCTAAAA+AGG | 0.256316 | 7.4:+52562823 | MS.gene043703:CDS |
| CTATTGCTATGATAGAAAAT+TGG | 0.281015 | 7.4:+52566846 | MS.gene043703:CDS |
| TTAACTCATCCTTTCAATTT+GGG | 0.294800 | 7.4:+52562912 | MS.gene043703:CDS |
| CTACAATCTTCATTATTTGA+AGG | 0.363782 | 7.4:-52562869 | None:intergenic |
| TGGTATGAGACACTTCGATA+TGG | 0.395031 | 7.4:+52564965 | MS.gene043703:CDS |
| CAGGTTATACCGTCTATGTT+TGG | 0.399062 | 7.4:+52564945 | MS.gene043703:intron |
| AGTAGTAGTTGTGGTAAAGT+TGG | 0.406041 | 7.4:+52562935 | MS.gene043703:CDS |
| CCATCCTTTGTTGTTGTCAT+GGG | 0.407820 | 7.4:+52563553 | MS.gene043703:CDS |
| TCCATCCTTTGTTGTTGTCA+TGG | 0.413268 | 7.4:+52563552 | MS.gene043703:CDS |
| AACTTCCACTTTGCACCACT+TGG | 0.413438 | 7.4:-52562632 | None:intergenic |
| TGCAAAGTGGAAGTTAGATT+TGG | 0.416439 | 7.4:+52562640 | MS.gene043703:CDS |
| CTTGGTTGAATCACTTTGGT+TGG | 0.426051 | 7.4:+52566816 | MS.gene043703:CDS |
| TTGTTAACATTTCTTTATCT+GGG | 0.431780 | 7.4:-52566787 | None:intergenic |
| TGTTAACTAGTGGAAGAGTT+TGG | 0.436159 | 7.4:+52565018 | MS.gene043703:CDS |
| AAATATGGTTTCAAAAGGGT+TGG | 0.440218 | 7.4:+52562678 | MS.gene043703:CDS |
| AACATGACAAATTCTCCTTA+AGG | 0.442597 | 7.4:+52566307 | MS.gene043703:CDS |
| ACTACTCAAAGCCTTCTTGA+AGG | 0.454194 | 7.4:+52562252 | MS.gene043703:CDS |
| TGTTGAACGCCACTTTACTT+TGG | 0.458075 | 7.4:+52563585 | MS.gene043703:CDS |
| AAGTGGAATGGCTTCACATA+AGG | 0.458886 | 7.4:-52562216 | None:intergenic |
| CTTCGATATGGAAAAGAAGA+AGG | 0.460858 | 7.4:+52564977 | MS.gene043703:CDS |
| GTAGTAGTTGTGGTAAAGTT+GGG | 0.468216 | 7.4:+52562936 | MS.gene043703:CDS |
| TCTACTTGGTTGAATCACTT+TGG | 0.469122 | 7.4:+52566812 | MS.gene043703:CDS |
| ATTTGTCATGTTGATGAAGT+TGG | 0.479653 | 7.4:-52566296 | None:intergenic |
| CATATTTGAAAAGCAGAAGA+TGG | 0.486489 | 7.4:-52562736 | None:intergenic |
| AAGGACAATAACTTAAAAGT+TGG | 0.486873 | 7.4:+52565116 | MS.gene043703:CDS |
| AAATGTTAACAACATCTACT+TGG | 0.490461 | 7.4:+52566798 | MS.gene043703:CDS |
| GTATGAGATATTCTATTGCT+TGG | 0.502141 | 7.4:+52566868 | MS.gene043703:CDS |
| CATCTTTGAAAAGAGTGCCT+TGG | 0.509820 | 7.4:+52562784 | MS.gene043703:CDS |
| ACATTTAAATTTGAACTCAC+AGG | 0.533222 | 7.4:+52565074 | MS.gene043703:CDS |
| TAAAGTTGGGAAATCACAAA+AGG | 0.535720 | 7.4:+52562949 | MS.gene043703:CDS |
| TACAACTTACCAAAGTAAAG+TGG | 0.538229 | 7.4:-52563594 | None:intergenic |
| GAAAGGGTAATTTATCTCCA+AGG | 0.548953 | 7.4:-52562801 | None:intergenic |
| TTTAAATTTGAACTCACAGG+TGG | 0.549372 | 7.4:+52565077 | MS.gene043703:CDS |
| ACTACTACTCCCAAATTGAA+AGG | 0.564619 | 7.4:-52562921 | None:intergenic |
| GTGGAAGAGTTTGGTCTGCA+AGG | 0.568632 | 7.4:+52565027 | MS.gene043703:CDS |
| CAATTTGGGAGTAGTAGTTG+TGG | 0.572534 | 7.4:+52562926 | MS.gene043703:CDS |
| CCCATGACAACAACAAAGGA+TGG | 0.573784 | 7.4:-52563553 | None:intergenic |
| CATTCACATATTACACATCA+AGG | 0.575000 | 7.4:+52566487 | MS.gene043703:CDS |
| AATTTGAACTCACAGGTGGA+TGG | 0.584326 | 7.4:+52565081 | MS.gene043703:CDS |
| CACTGTTCACATCTTTAGAG+AGG | 0.585792 | 7.4:+52565184 | MS.gene043703:CDS |
| GAGTATCATTCTCTATCTCA+TGG | 0.585998 | 7.4:+52562713 | MS.gene043703:CDS |
| TGAACTCACAGGTGGATGGA+AGG | 0.586048 | 7.4:+52565085 | MS.gene043703:CDS |
| TTCGATATGGAAAAGAAGAA+GGG | 0.592083 | 7.4:+52564978 | MS.gene043703:CDS |
| TTGATGAAGTTGGTCTCTGA+AGG | 0.618960 | 7.4:-52566286 | None:intergenic |
| AGACTCCAAGTGGTGCAAAG+TGG | 0.629081 | 7.4:+52562627 | MS.gene043703:CDS |
| AAGACATGAAATAGATACAC+GGG | 0.634403 | 7.4:+52566629 | MS.gene043703:intron |
| TGGATGGAAGGCATTTGCAA+AGG | 0.640290 | 7.4:+52565097 | MS.gene043703:CDS |
| CTTATTGACAGAAAGTGCAA+AGG | 0.642425 | 7.4:+52562983 | MS.gene043703:CDS |
| ATATATCTAAAGACTCCAAG+TGG | 0.665826 | 7.4:+52562617 | MS.gene043703:CDS |
| TGCTCCCATGACAACAACAA+AGG | 0.686642 | 7.4:-52563557 | None:intergenic |
| TGTCTCATACCAAACATAGA+CGG | 0.687526 | 7.4:-52564954 | None:intergenic |
| AAAGACATGAAATAGATACA+CGG | 0.696599 | 7.4:+52566628 | MS.gene043703:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATTAAGATTAGAAA+AGG | - | chr7.4:52566116-52566135 | None:intergenic | 10.0% |
| !! | AAAAAATAAGTAAGAAATTT+AGG | + | chr7.4:52563956-52563975 | MS.gene043703:intron | 10.0% |
| !! | ATTATTTCCTATAATATTTA+AGG | - | chr7.4:52564827-52564846 | None:intergenic | 10.0% |
| !! | TAAAATATAATTAGATAACT+AGG | + | chr7.4:52564862-52564881 | MS.gene043703:intron | 10.0% |
| !!! | AAATTTCTTACTTATTTTTT+TGG | - | chr7.4:52563956-52563975 | None:intergenic | 10.0% |
| !!! | AATTTCTTACTTATTTTTTT+GGG | - | chr7.4:52563955-52563974 | None:intergenic | 10.0% |
| !!! | TTTTAATTTTATTTTCACTT+TGG | + | chr7.4:52566733-52566752 | MS.gene043703:intron | 10.0% |
| !! | AAAAATTAGAGATGTAAAAT+CGG | - | chr7.4:52562449-52562468 | None:intergenic | 15.0% |
| !! | TCCAAAAAGTAAATAAAAAT+TGG | - | chr7.4:52566548-52566567 | None:intergenic | 15.0% |
| !!! | ACCAATTTTTATTTACTTTT+TGG | + | chr7.4:52566544-52566563 | MS.gene043703:intron | 15.0% |
| !!! | GAAATTAAGTAATTGTTTTA+TGG | - | chr7.4:52564010-52564029 | None:intergenic | 15.0% |
| !!! | TAAATTTTTTCAATCATGAA+AGG | + | chr7.4:52563423-52563442 | MS.gene043703:intron | 15.0% |
| !!! | TTCATGTTATCATTTTTAAA+TGG | + | chr7.4:52563079-52563098 | MS.gene043703:intron | 15.0% |
| !! | AATAATATTAAGTCTACACT+CGG | + | chr7.4:52563767-52563786 | MS.gene043703:intron | 20.0% |
| !! | AATGAAACTGTAAATTCAAA+TGG | - | chr7.4:52565750-52565769 | None:intergenic | 20.0% |
| !! | AATTCAAATGGTGAAAAATT+AGG | - | chr7.4:52565738-52565757 | None:intergenic | 20.0% |
| !! | AATTTACAGTTTCATTGAAA+AGG | + | chr7.4:52565754-52565773 | MS.gene043703:intron | 20.0% |
| !! | AGAACAAAAGCTAATAATTT+AGG | - | chr7.4:52563053-52563072 | None:intergenic | 20.0% |
| !! | AGAGATACCTTAAATATTAT+AGG | + | chr7.4:52564817-52564836 | MS.gene043703:intron | 20.0% |
| !! | AGTAACATATTTGATACTTA+AGG | - | chr7.4:52566670-52566689 | None:intergenic | 20.0% |
| !! | ATAAAAGAAGAAGATATTCA+AGG | + | chr7.4:52565338-52565357 | MS.gene043703:intron | 20.0% |
| !! | ATTCAAATGGTGAAAAATTA+GGG | - | chr7.4:52565737-52565756 | None:intergenic | 20.0% |
| !! | CAACAAAAAATTTAAGTCAA+AGG | - | chr7.4:52562290-52562309 | None:intergenic | 20.0% |
| !! | CTATTATTTATTGGGTATTA+AGG | - | chr7.4:52565868-52565887 | None:intergenic | 20.0% |
| !! | GAAATAATAAAGTGATATCA+TGG | + | chr7.4:52564839-52564858 | MS.gene043703:intron | 20.0% |
| !! | GGATGATACTATTATTTATT+GGG | - | chr7.4:52565876-52565895 | None:intergenic | 20.0% |
| !! | GTCTTTAGATATATAGTATT+TGG | - | chr7.4:52562611-52562630 | None:intergenic | 20.0% |
| !! | TAAAAAAATGATGTATGAAG+TGG | + | chr7.4:52565620-52565639 | MS.gene043703:intron | 20.0% |
| !! | TCTGAAAAATGTGTAAAAAT+AGG | - | chr7.4:52566602-52566621 | None:intergenic | 20.0% |
| !! | TGGATATTAAATAAAAAGCT+TGG | + | chr7.4:52564691-52564710 | MS.gene043703:intron | 20.0% |
| !! | TGGATGATACTATTATTTAT+TGG | - | chr7.4:52565877-52565896 | None:intergenic | 20.0% |
| !! | TTAGGTCCAAAAATAAATTA+GGG | + | chr7.4:52563974-52563993 | MS.gene043703:intron | 20.0% |
| !! | TTATAAGCAATTGAAACATT+CGG | - | chr7.4:52564451-52564470 | None:intergenic | 20.0% |
| !! | TTATGTTTCTTTATCTTACT+TGG | + | chr7.4:52562317-52562336 | MS.gene043703:intron | 20.0% |
| !! | TTGTTAACATTTCTTTATCT+GGG | - | chr7.4:52566790-52566809 | None:intergenic | 20.0% |
| !! | TTTAGGTCCAAAAATAAATT+AGG | + | chr7.4:52563973-52563992 | MS.gene043703:intron | 20.0% |
| !!! | AAATAGATTTTGACATGTTA+TGG | + | chr7.4:52563194-52563213 | MS.gene043703:intron | 20.0% |
| !!! | AATTGTTTTGTATAAACACT+TGG | + | chr7.4:52564671-52564690 | MS.gene043703:intron | 20.0% |
| !!! | ATAATTTAGGTTAACTTATG+AGG | - | chr7.4:52563040-52563059 | None:intergenic | 20.0% |
| !!! | ATATTTGTTATATGAGAATG+TGG | - | chr7.4:52565284-52565303 | None:intergenic | 20.0% |
| !!! | GAATATCTTCTTCTTTTATT+CGG | - | chr7.4:52565337-52565356 | None:intergenic | 20.0% |
| !!! | TAAAAAGTGATGGAAAAATA+TGG | + | chr7.4:52562663-52562682 | MS.gene043703:CDS | 20.0% |
| !!! | TGTTTCTTTTCTATTGTAAA+TGG | + | chr7.4:52565594-52565613 | MS.gene043703:intron | 20.0% |
| ! | AAAATACAAATCATAGCTTG+AGG | - | chr7.4:52563269-52563288 | None:intergenic | 25.0% |
| ! | AAAGACATGAAATAGATACA+CGG | + | chr7.4:52566628-52566647 | MS.gene043703:intron | 25.0% |
| ! | AAAGTTGTTGGATAATCAAT+TGG | - | chr7.4:52563318-52563337 | None:intergenic | 25.0% |
| ! | AAATGTTAACAACATCTACT+TGG | + | chr7.4:52566798-52566817 | MS.gene043703:CDS | 25.0% |
| ! | AAGGACAATAACTTAAAAGT+TGG | + | chr7.4:52565116-52565135 | MS.gene043703:CDS | 25.0% |
| ! | AAGTAGTGAGAAACATATAT+TGG | + | chr7.4:52563735-52563754 | MS.gene043703:intron | 25.0% |
| ! | AATCTATTGTGAGGTTATAA+TGG | + | chr7.4:52564088-52564107 | MS.gene043703:intron | 25.0% |
| ! | ACATCTCTCTATACATAAAA+TGG | - | chr7.4:52564590-52564609 | None:intergenic | 25.0% |
| ! | ACATTTAAATTTGAACTCAC+AGG | + | chr7.4:52565074-52565093 | MS.gene043703:CDS | 25.0% |
| ! | AGAGGGAAAAATTTAGTAAA+CGG | - | chr7.4:52562399-52562418 | None:intergenic | 25.0% |
| ! | ATCTATTGTGAGGTTATAAT+GGG | + | chr7.4:52564089-52564108 | MS.gene043703:intron | 25.0% |
| ! | ATTAAGATTAGAAAAGGAAG+AGG | - | chr7.4:52566110-52566129 | None:intergenic | 25.0% |
| ! | CAGTGTGATCATTATAAAAA+AGG | - | chr7.4:52565900-52565919 | None:intergenic | 25.0% |
| ! | CTACAATCTTCATTATTTGA+AGG | - | chr7.4:52562872-52562891 | None:intergenic | 25.0% |
| ! | CTATTGCTATGATAGAAAAT+TGG | + | chr7.4:52566846-52566865 | MS.gene043703:CDS | 25.0% |
| ! | CTCGAAATGCAAAATAAAAA+TGG | - | chr7.4:52565527-52565546 | None:intergenic | 25.0% |
| ! | GGAAAAATATGGTTTCAAAA+GGG | + | chr7.4:52562674-52562693 | MS.gene043703:CDS | 25.0% |
| ! | GTTGTTAACATTTCTTTATC+TGG | - | chr7.4:52566791-52566810 | None:intergenic | 25.0% |
| ! | TAAAATTCTCTTAACTATGC+CGG | + | chr7.4:52564468-52564487 | MS.gene043703:intron | 25.0% |
| ! | TAACTAATGTTACATGTATC+AGG | + | chr7.4:52565445-52565464 | MS.gene043703:intron | 25.0% |
| ! | TACATTCACATAAAAGTTGT+TGG | - | chr7.4:52563330-52563349 | None:intergenic | 25.0% |
| ! | TAGGTCCAAAAATAAATTAG+GGG | + | chr7.4:52563975-52563994 | MS.gene043703:intron | 25.0% |
| ! | TAGTTATGATCTTGAAAAAG+TGG | - | chr7.4:52562236-52562255 | None:intergenic | 25.0% |
| ! | TATTTCTCTACAAACTTTCT+TGG | - | chr7.4:52562575-52562594 | None:intergenic | 25.0% |
| ! | TCAAAAGAACTAAAACTCTT+TGG | - | chr7.4:52565417-52565436 | None:intergenic | 25.0% |
| ! | TCAATATCTCAAAGTAAGTT+TGG | + | chr7.4:52565230-52565249 | MS.gene043703:intron | 25.0% |
| ! | TCTAATCTTCATTTCTTGAT+AGG | + | chr7.4:52566177-52566196 | MS.gene043703:intron | 25.0% |
| ! | TGGAAAAATATGGTTTCAAA+AGG | + | chr7.4:52562673-52562692 | MS.gene043703:CDS | 25.0% |
| ! | TGTGATCATTATAAAAAAGG+TGG | - | chr7.4:52565897-52565916 | None:intergenic | 25.0% |
| ! | TTAACTCATCCTTTCAATTT+GGG | + | chr7.4:52562912-52562931 | MS.gene043703:CDS | 25.0% |
| !! | AAAAATTTAGTAAACGGGTT+GGG | - | chr7.4:52562393-52562412 | None:intergenic | 25.0% |
| !! | ACGTGTTTACAATCAATTTT+GGG | - | chr7.4:52563173-52563192 | None:intergenic | 25.0% |
| !! | ATAGATTTTGCCTAATGTAA+TGG | + | chr7.4:52562496-52562515 | MS.gene043703:intron | 25.0% |
| !! | CAAGTATTTTCCATTACATT+AGG | - | chr7.4:52562509-52562528 | None:intergenic | 25.0% |
| !! | TACGTGTTTACAATCAATTT+TGG | - | chr7.4:52563174-52563193 | None:intergenic | 25.0% |
| !! | TCATTACACATTTTTATGAG+AGG | + | chr7.4:52564224-52564243 | MS.gene043703:intron | 25.0% |
| !! | TTAGATTTGGTAAAAAGTGA+TGG | + | chr7.4:52562653-52562672 | MS.gene043703:CDS | 25.0% |
| !! | TTTACTAAATTTTTCCCTCT+TGG | + | chr7.4:52562399-52562418 | MS.gene043703:intron | 25.0% |
| !!! | AAATGATTTTAGTCGAAAGT+GGG | - | chr7.4:52563380-52563399 | None:intergenic | 25.0% |
| !!! | ATGAACCCCTAATTTATTTT+TGG | - | chr7.4:52563983-52564002 | None:intergenic | 25.0% |
| !!! | TATTTGCTTTTTCTAATGCT+TGG | + | chr7.4:52564922-52564941 | MS.gene043703:intron | 25.0% |
| !!! | TGATTTTGATAGAAGAGTTT+GGG | - | chr7.4:52564141-52564160 | None:intergenic | 25.0% |
| !!! | TTACTTATTTTTTTGGGTCA+AGG | - | chr7.4:52563949-52563968 | None:intergenic | 25.0% |
| !!! | TTGATTTTGATAGAAGAGTT+TGG | - | chr7.4:52564142-52564161 | None:intergenic | 25.0% |
| AAAATCTTGCACAACTTCTA+AGG | + | chr7.4:52564283-52564302 | MS.gene043703:intron | 30.0% | |
| AAAGAACTAAAACTCTTTGG+TGG | - | chr7.4:52565414-52565433 | None:intergenic | 30.0% | |
| AAATATGGTTTCAAAAGGGT+TGG | + | chr7.4:52562678-52562697 | MS.gene043703:CDS | 30.0% | |
| AAATGGTGAAAAATTAGGGA+TGG | - | chr7.4:52565733-52565752 | None:intergenic | 30.0% | |
| AAATGTTGTAGCTGAAATGA+AGG | - | chr7.4:52566407-52566426 | None:intergenic | 30.0% | |
| AACATAGATCAGAGGTTATT+TGG | - | chr7.4:52566337-52566356 | None:intergenic | 30.0% | |
| AACATGACAAATTCTCCTTA+AGG | + | chr7.4:52566307-52566326 | MS.gene043703:CDS | 30.0% | |
| AACATTCGGATAACAATTTG+CGG | - | chr7.4:52564437-52564456 | None:intergenic | 30.0% | |
| AAGACATGAAATAGATACAC+GGG | + | chr7.4:52566629-52566648 | MS.gene043703:intron | 30.0% | |
| AATGCTGACATTGACATATT+TGG | - | chr7.4:52564391-52564410 | None:intergenic | 30.0% | |
| AATGGTGAAAAATTAGGGAT+GGG | - | chr7.4:52565732-52565751 | None:intergenic | 30.0% | |
| ACCTCACAATAGATTATGAA+TGG | - | chr7.4:52564083-52564102 | None:intergenic | 30.0% | |
| AGGGAAGATTTAGATCTAAT+AGG | - | chr7.4:52565797-52565816 | None:intergenic | 30.0% | |
| AGGTTATTTGGTATACCTTA+AGG | - | chr7.4:52566325-52566344 | None:intergenic | 30.0% | |
| AGTTGTAGTCTAAACAATTG+AGG | + | chr7.4:52564193-52564212 | MS.gene043703:intron | 30.0% | |
| ATAAAAATGGAATTGCCTCT+TGG | - | chr7.4:52565514-52565533 | None:intergenic | 30.0% | |
| ATATATCTAAAGACTCCAAG+TGG | + | chr7.4:52562617-52562636 | MS.gene043703:CDS | 30.0% | |
| ATGATCTTGAAAAAGTGGAA+TGG | - | chr7.4:52562231-52562250 | None:intergenic | 30.0% | |
| ATGGAAAACTACAAAAACAC+CGG | + | chr7.4:52565471-52565490 | MS.gene043703:intron | 30.0% | |
| ATTATATACACTTCCTCGTT+TGG | - | chr7.4:52565662-52565681 | None:intergenic | 30.0% | |
| CAAAAGAGTTGAAGCTAAAA+AGG | + | chr7.4:52562823-52562842 | MS.gene043703:CDS | 30.0% | |
| CATATTTGAAAAGCAGAAGA+TGG | - | chr7.4:52562739-52562758 | None:intergenic | 30.0% | |
| CATTCACATATTACACATCA+AGG | + | chr7.4:52566487-52566506 | MS.gene043703:CDS | 30.0% | |
| CCAATCTAGAAAACAAGATT+TGG | - | chr7.4:52563656-52563675 | None:intergenic | 30.0% | |
| CCTCACAATAGATTATGAAT+GGG | - | chr7.4:52564082-52564101 | None:intergenic | 30.0% | |
| GAAAAATTTAGTAAACGGGT+TGG | - | chr7.4:52562394-52562413 | None:intergenic | 30.0% | |
| GAGGGAAAAATTTAGTAAAC+GGG | - | chr7.4:52562398-52562417 | None:intergenic | 30.0% | |
| GCAAAAATTAGAAGACCATA+AGG | - | chr7.4:52563463-52563482 | None:intergenic | 30.0% | |
| GTATGAGATATTCTATTGCT+TGG | + | chr7.4:52566868-52566887 | MS.gene043703:CDS | 30.0% | |
| GTTAACTCATCCTTTCAATT+TGG | + | chr7.4:52562911-52562930 | MS.gene043703:CDS | 30.0% | |
| GTTGTAGTCTAAACAATTGA+GGG | + | chr7.4:52564194-52564213 | MS.gene043703:intron | 30.0% | |
| TAAAGTTGGGAAATCACAAA+AGG | + | chr7.4:52562949-52562968 | MS.gene043703:CDS | 30.0% | |
| TACAACTTACCAAAGTAAAG+TGG | - | chr7.4:52563597-52563616 | None:intergenic | 30.0% | |
| TATGTATAGAGAGATGTGAT+AGG | + | chr7.4:52564593-52564612 | MS.gene043703:intron | 30.0% | |
| TGATACATATGCACAGTTTA+CGG | + | chr7.4:52565918-52565937 | MS.gene043703:intron | 30.0% | |
| TGGTGAGATTCAAAAAACAT+TGG | - | chr7.4:52566036-52566055 | None:intergenic | 30.0% | |
| TTATTGGGTATTAAGGAAGT+AGG | - | chr7.4:52565861-52565880 | None:intergenic | 30.0% | |
| TTCGATATGGAAAAGAAGAA+GGG | + | chr7.4:52564978-52564997 | MS.gene043703:CDS | 30.0% | |
| TTTAAATTTGAACTCACAGG+TGG | + | chr7.4:52565077-52565096 | MS.gene043703:CDS | 30.0% | |
| ! | AAACACCTAATTTGAGATTG+AGG | - | chr7.4:52565579-52565598 | None:intergenic | 30.0% |
| ! | AAATTTTTCCCTCTTGGTTA+GGG | + | chr7.4:52562405-52562424 | MS.gene043703:intron | 30.0% |
| ! | AACACCTAATTTGAGATTGA+GGG | - | chr7.4:52565578-52565597 | None:intergenic | 30.0% |
| ! | ACTACAACTTTTCCAAGTAA+AGG | - | chr7.4:52564182-52564201 | None:intergenic | 30.0% |
| ! | ACTCCATTATGTAACTTTTG+GGG | + | chr7.4:52565963-52565982 | MS.gene043703:intron | 30.0% |
| ! | ATAGTTTGTGTTTGGTTTCA+CGG | + | chr7.4:52563139-52563158 | MS.gene043703:intron | 30.0% |
| ! | ATGGTCTTCTAATTTTTGCA+GGG | + | chr7.4:52563464-52563483 | MS.gene043703:intron | 30.0% |
| ! | ATTTGTCATGTTGATGAAGT+TGG | - | chr7.4:52566299-52566318 | None:intergenic | 30.0% |
| ! | CACTCCATTATGTAACTTTT+GGG | + | chr7.4:52565962-52565981 | MS.gene043703:intron | 30.0% |
| ! | CATGATTGTTATTACGTAGT+GGG | + | chr7.4:52564040-52564059 | MS.gene043703:intron | 30.0% |
| ! | CTTTGGTTGAATCTTTTCAA+TGG | + | chr7.4:52566750-52566769 | MS.gene043703:intron | 30.0% |
| ! | GTTTTCTCATAAGGATTTGT+CGG | + | chr7.4:52564310-52564329 | MS.gene043703:intron | 30.0% |
| ! | TAAATTTTTCCCTCTTGGTT+AGG | + | chr7.4:52562404-52562423 | MS.gene043703:intron | 30.0% |
| ! | TATGGTCTTCTAATTTTTGC+AGG | + | chr7.4:52563463-52563482 | MS.gene043703:intron | 30.0% |
| ! | TCACTCCATTATGTAACTTT+TGG | + | chr7.4:52565961-52565980 | MS.gene043703:intron | 30.0% |
| ! | TCATACTTTCTTTTCTTGAC+AGG | + | chr7.4:52566261-52566280 | MS.gene043703:intron | 30.0% |
| ! | TTACAAGTTTTCCTTCAAGA+AGG | - | chr7.4:52562266-52562285 | None:intergenic | 30.0% |
| ! | TTAGCTTCAACTCTTTTGAA+AGG | - | chr7.4:52562821-52562840 | None:intergenic | 30.0% |
| ! | TTTAGAGTAACATAGATCAG+AGG | - | chr7.4:52566345-52566364 | None:intergenic | 30.0% |
| !! | CAAATGATTTTAGTCGAAAG+TGG | - | chr7.4:52563381-52563400 | None:intergenic | 30.0% |
| !! | CATCTTCTGCTTTTCAAATA+TGG | + | chr7.4:52562737-52562756 | MS.gene043703:CDS | 30.0% |
| !! | GAAGGGAGATATTTATTTTC+AGG | + | chr7.4:52564995-52565014 | MS.gene043703:CDS | 30.0% |
| !! | TAGATTTTGACATGTTATGG+TGG | + | chr7.4:52563197-52563216 | MS.gene043703:intron | 30.0% |
| !! | TAGCTTCAACTCTTTTGAAA+GGG | - | chr7.4:52562820-52562839 | None:intergenic | 30.0% |
| !! | TCTAGATTGGATTGGTTATA+TGG | + | chr7.4:52563666-52563685 | MS.gene043703:intron | 30.0% |
| !!! | CCAAATCTTGTTTTCTAGAT+TGG | + | chr7.4:52563653-52563672 | MS.gene043703:intron | 30.0% |
| !!! | TATTTTCAGGTGTTAACTAG+TGG | + | chr7.4:52565008-52565027 | MS.gene043703:CDS | 30.0% |
| !!! | TCTTGTTTTCTAGATTGGAT+TGG | + | chr7.4:52563658-52563677 | MS.gene043703:intron | 30.0% |
| !!! | TTATTTTTTTGGGTCAAGGA+CGG | - | chr7.4:52563945-52563964 | None:intergenic | 30.0% |
| AAAAAGGTCTACAACGTTCA+AGG | + | chr7.4:52562839-52562858 | MS.gene043703:CDS | 35.0% | |
| ACTACTACTCCCAAATTGAA+AGG | - | chr7.4:52562924-52562943 | None:intergenic | 35.0% | |
| AGTAGTAGTTGTGGTAAAGT+TGG | + | chr7.4:52562935-52562954 | MS.gene043703:CDS | 35.0% | |
| ATCATCTCACATCCTTTACT+TGG | + | chr7.4:52564167-52564186 | MS.gene043703:intron | 35.0% | |
| ATGCAGCAAAGAAAAAGACA+TGG | + | chr7.4:52566441-52566460 | MS.gene043703:intron | 35.0% | |
| CCCATTCATAATCTATTGTG+AGG | + | chr7.4:52564079-52564098 | MS.gene043703:intron | 35.0% | |
| CGGTAAGATTCTGCATAAAA+TGG | - | chr7.4:52565317-52565336 | None:intergenic | 35.0% | |
| CTAATGTTACATGTATCAGG+TGG | + | chr7.4:52565448-52565467 | MS.gene043703:intron | 35.0% | |
| CTACTTAATCCAGTAAAGAC+TGG | - | chr7.4:52563721-52563740 | None:intergenic | 35.0% | |
| CTTCGATATGGAAAAGAAGA+AGG | + | chr7.4:52564977-52564996 | MS.gene043703:CDS | 35.0% | |
| GAAAGGGTAATTTATCTCCA+AGG | - | chr7.4:52562804-52562823 | None:intergenic | 35.0% | |
| GAGTATCATTCTCTATCTCA+TGG | + | chr7.4:52562713-52562732 | MS.gene043703:CDS | 35.0% | |
| GATACATATGCACAGTTTAC+GGG | + | chr7.4:52565919-52565938 | MS.gene043703:intron | 35.0% | |
| GTAGTAGTTGTGGTAAAGTT+GGG | + | chr7.4:52562936-52562955 | MS.gene043703:CDS | 35.0% | |
| GTGATCAAATGTATGCCTTA+TGG | + | chr7.4:52563445-52563464 | MS.gene043703:intron | 35.0% | |
| TACTCCCTCAATCTCAAATT+AGG | + | chr7.4:52565571-52565590 | MS.gene043703:intron | 35.0% | |
| TCAAGGATGAAGAAAGAGAA+TGG | + | chr7.4:52565355-52565374 | MS.gene043703:intron | 35.0% | |
| TCTACTTGGTTGAATCACTT+TGG | + | chr7.4:52566812-52566831 | MS.gene043703:CDS | 35.0% | |
| TGCAAAGTGGAAGTTAGATT+TGG | + | chr7.4:52562640-52562659 | MS.gene043703:CDS | 35.0% | |
| TGCAGCAAAGAAAAAGACAT+GGG | + | chr7.4:52566442-52566461 | MS.gene043703:intron | 35.0% | |
| TGTCTCATACCAAACATAGA+CGG | - | chr7.4:52564957-52564976 | None:intergenic | 35.0% | |
| TGTTAACTAGTGGAAGAGTT+TGG | + | chr7.4:52565018-52565037 | MS.gene043703:CDS | 35.0% | |
| TTAGAAAAGGAAGAGGAAGA+AGG | - | chr7.4:52566103-52566122 | None:intergenic | 35.0% | |
| TTTCTTTCTCCAGTCTTTAC+TGG | + | chr7.4:52563709-52563728 | MS.gene043703:intron | 35.0% | |
| TTTGATAGAAGAGTTTGGGA+TGG | - | chr7.4:52564137-52564156 | None:intergenic | 35.0% | |
| ! | CAAGATTTGGTTACTGATGA+TGG | - | chr7.4:52563643-52563662 | None:intergenic | 35.0% |
| ! | CACATGGTTTTTCATGAAGT+GGG | - | chr7.4:52563107-52563126 | None:intergenic | 35.0% |
| ! | CTCCATTATGTAACTTTTGG+GGG | + | chr7.4:52565964-52565983 | MS.gene043703:intron | 35.0% |
| ! | CTTATTGACAGAAAGTGCAA+AGG | + | chr7.4:52562983-52563002 | MS.gene043703:CDS | 35.0% |
| ! | GCATGATTGTTATTACGTAG+TGG | + | chr7.4:52564039-52564058 | MS.gene043703:intron | 35.0% |
| ! | TAAGGTTGGGTTTTCTCATA+AGG | + | chr7.4:52564301-52564320 | MS.gene043703:intron | 35.0% |
| ! | TGCTAGACATAGTTTGTGTT+TGG | + | chr7.4:52563131-52563150 | MS.gene043703:intron | 35.0% |
| !! | GAGGAGATTTTGACACTTAT+TGG | + | chr7.4:52564243-52564262 | MS.gene043703:intron | 35.0% |
| AAGGATTTGTCGGATGTTGA+TGG | + | chr7.4:52564320-52564339 | MS.gene043703:intron | 40.0% | |
| AAGTGGAATGGCTTCACATA+AGG | - | chr7.4:52562219-52562238 | None:intergenic | 40.0% | |
| AATTTGAACTCACAGGTGGA+TGG | + | chr7.4:52565081-52565100 | MS.gene043703:CDS | 40.0% | |
| ACTACTCAAAGCCTTCTTGA+AGG | + | chr7.4:52562252-52562271 | MS.gene043703:CDS | 40.0% | |
| ACTGTGATATACTCCAAACG+AGG | + | chr7.4:52565646-52565665 | MS.gene043703:intron | 40.0% | |
| AGGAAGAAGGAATGAGAGAA+TGG | - | chr7.4:52566063-52566082 | None:intergenic | 40.0% | |
| AGGAAGTGAGAGAATGGAAA+AGG | - | chr7.4:52566083-52566102 | None:intergenic | 40.0% | |
| AGGAATGAGAGAATGGTGAA+TGG | - | chr7.4:52566056-52566075 | None:intergenic | 40.0% | |
| AGGGTGTAACAACAGATATG+AGG | - | chr7.4:52565817-52565836 | None:intergenic | 40.0% | |
| AGTGTTACCCAGTGGATAAT+AGG | - | chr7.4:52565837-52565856 | None:intergenic | 40.0% | |
| CAATTTGGGAGTAGTAGTTG+TGG | + | chr7.4:52562926-52562945 | MS.gene043703:CDS | 40.0% | |
| CAGGTTATACCGTCTATGTT+TGG | + | chr7.4:52564945-52564964 | MS.gene043703:intron | 40.0% | |
| CCACTTCATGAAAAACCATG+TGG | + | chr7.4:52563105-52563124 | MS.gene043703:intron | 40.0% | |
| CTATGTCTAGCAATTCCACA+TGG | - | chr7.4:52563123-52563142 | None:intergenic | 40.0% | |
| CTTGGTTGAATCACTTTGGT+TGG | + | chr7.4:52566816-52566835 | MS.gene043703:CDS | 40.0% | |
| GAAAACTACAAAAACACCGG+TGG | + | chr7.4:52565474-52565493 | MS.gene043703:intron | 40.0% | |
| GAACTAAAACTCTTTGGTGG+TGG | - | chr7.4:52565411-52565430 | None:intergenic | 40.0% | |
| GAGAGAATGGAAAAGGAAGA+AGG | - | chr7.4:52566076-52566095 | None:intergenic | 40.0% | |
| GGGTGTAACAACAGATATGA+GGG | - | chr7.4:52565816-52565835 | None:intergenic | 40.0% | |
| GTGTTACCCAGTGGATAATA+GGG | - | chr7.4:52565836-52565855 | None:intergenic | 40.0% | |
| GTTACACCCTATTATCCACT+GGG | + | chr7.4:52565827-52565846 | MS.gene043703:intron | 40.0% | |
| TAGACATGTCATCACACACA+GGG | + | chr7.4:52563890-52563909 | MS.gene043703:intron | 40.0% | |
| TGCCCCCAAAAGTTACATAA+TGG | - | chr7.4:52565969-52565988 | None:intergenic | 40.0% | |
| TGGTATGAGACACTTCGATA+TGG | + | chr7.4:52564965-52564984 | MS.gene043703:CDS | 40.0% | |
| TGTTACACCCTATTATCCAC+TGG | + | chr7.4:52565826-52565845 | MS.gene043703:intron | 40.0% | |
| TGTTACATGTATCAGGTGGA+TGG | + | chr7.4:52565452-52565471 | MS.gene043703:intron | 40.0% | |
| TTAGACATGTCATCACACAC+AGG | + | chr7.4:52563889-52563908 | MS.gene043703:intron | 40.0% | |
| ! | CACTGTTCACATCTTTAGAG+AGG | + | chr7.4:52565184-52565203 | MS.gene043703:CDS | 40.0% |
| ! | CCACATGGTTTTTCATGAAG+TGG | - | chr7.4:52563108-52563127 | None:intergenic | 40.0% |
| ! | TATCTGAAGTAAGGCGAGTA+GGG | + | chr7.4:52563916-52563935 | MS.gene043703:intron | 40.0% |
| ! | TGTTGAACGCCACTTTACTT+TGG | + | chr7.4:52563585-52563604 | MS.gene043703:CDS | 40.0% |
| ! | TTGATGAAGTTGGTCTCTGA+AGG | - | chr7.4:52566289-52566308 | None:intergenic | 40.0% |
| ! | TTTGTGTTTGGTTTCACGGT+GGG | + | chr7.4:52563143-52563162 | MS.gene043703:intron | 40.0% |
| !! | AAAGTGGGTTGAATGTGAAG+TGG | - | chr7.4:52563365-52563384 | None:intergenic | 40.0% |
| !! | CATCTTTGAAAAGAGTGCCT+TGG | + | chr7.4:52562784-52562803 | MS.gene043703:CDS | 40.0% |
| !! | CCATCCTTTGTTGTTGTCAT+GGG | + | chr7.4:52563553-52563572 | MS.gene043703:CDS | 40.0% |
| !! | CTTGCACAACTTCTAAGGTT+GGG | + | chr7.4:52564288-52564307 | MS.gene043703:intron | 40.0% |
| !! | TCCATCCTTTGTTGTTGTCA+TGG | + | chr7.4:52563552-52563571 | MS.gene043703:CDS | 40.0% |
| !! | TCTTGCACAACTTCTAAGGT+TGG | + | chr7.4:52564287-52564306 | MS.gene043703:intron | 40.0% |
| !!! | TGCTTTTTCTAATGCTTGGC+AGG | + | chr7.4:52564926-52564945 | MS.gene043703:intron | 40.0% |
| AACTTCCACTTTGCACCACT+TGG | - | chr7.4:52562635-52562654 | None:intergenic | 45.0% | |
| CCACGGGTATATGACAAGTA+AGG | - | chr7.4:52562366-52562385 | None:intergenic | 45.0% | |
| CCCATGACAACAACAAAGGA+TGG | - | chr7.4:52563556-52563575 | None:intergenic | 45.0% | |
| CCTTACTTGTCATATACCCG+TGG | + | chr7.4:52562363-52562382 | MS.gene043703:intron | 45.0% | |
| CTTAACTATGCCGGTGACTA+TGG | + | chr7.4:52564477-52564496 | MS.gene043703:intron | 45.0% | |
| GGAAGAAGGAAGTGAGAGAA+TGG | - | chr7.4:52566089-52566108 | None:intergenic | 45.0% | |
| TCGACATACCCTAACCAAGA+GGG | - | chr7.4:52562416-52562435 | None:intergenic | 45.0% | |
| TGCTCCCATGACAACAACAA+AGG | - | chr7.4:52563560-52563579 | None:intergenic | 45.0% | |
| ! | ACAGGGACGTATCTGAAGTA+AGG | + | chr7.4:52563907-52563926 | MS.gene043703:intron | 45.0% |
| ! | GTATCTGAAGTAAGGCGAGT+AGG | + | chr7.4:52563915-52563934 | MS.gene043703:intron | 45.0% |
| ! | GTTTGTGTTTGGTTTCACGG+TGG | + | chr7.4:52563142-52563161 | MS.gene043703:intron | 45.0% |
| ! | TTGTGTTTGGTTTCACGGTG+GGG | + | chr7.4:52563144-52563163 | MS.gene043703:intron | 45.0% |
| !! | TGGATGGAAGGCATTTGCAA+AGG | + | chr7.4:52565097-52565116 | MS.gene043703:CDS | 45.0% |
| !! | TTAGGGTATGTCGAGTTGAG+CGG | + | chr7.4:52562422-52562441 | MS.gene043703:intron | 45.0% |
| AAGTAGGCAGTGTTACCCAG+TGG | - | chr7.4:52565845-52565864 | None:intergenic | 50.0% | |
| AGACTCCAAGTGGTGCAAAG+TGG | + | chr7.4:52562627-52562646 | MS.gene043703:CDS | 50.0% | |
| CTCGACATACCCTAACCAAG+AGG | - | chr7.4:52562417-52562436 | None:intergenic | 50.0% | |
| GTGGAAGAGTTTGGTCTGCA+AGG | + | chr7.4:52565027-52565046 | MS.gene043703:CDS | 50.0% | |
| TCAACAGTCGCCATAGTCAC+CGG | - | chr7.4:52564490-52564509 | None:intergenic | 50.0% | |
| TGAACTCACAGGTGGATGGA+AGG | + | chr7.4:52565085-52565104 | MS.gene043703:CDS | 50.0% | |
| TGGAATTGCCTCTTGGTTCC+AGG | - | chr7.4:52565507-52565526 | None:intergenic | 50.0% | |
| ! | GTTTGGGATGGTGCAAGACT+AGG | - | chr7.4:52564125-52564144 | None:intergenic | 50.0% |
| !! | TAAACGGGTTGGGTTTGCCA+CGG | - | chr7.4:52562383-52562402 | None:intergenic | 50.0% |
| GTGTACTGCCTGGAACCAAG+AGG | + | chr7.4:52565496-52565515 | MS.gene043703:intron | 55.0% | |
| !! | AAACGGGTTGGGTTTGCCAC+GGG | - | chr7.4:52562382-52562401 | None:intergenic | 55.0% |
| AACACCGGTGGTGTACTGCC+TGG | + | chr7.4:52565486-52565505 | MS.gene043703:intron | 60.0% | |
| GGTTCCAGGCAGTACACCAC+CGG | - | chr7.4:52565493-52565512 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 52562201 | 52566928 | 52562201 | ID=MS.gene043703 |
| chr7.4 | mRNA | 52562201 | 52566928 | 52562201 | ID=MS.gene043703.t1;Parent=MS.gene043703 |
| chr7.4 | exon | 52562201 | 52562281 | 52562201 | ID=MS.gene043703.t1.exon1;Parent=MS.gene043703.t1 |
| chr7.4 | CDS | 52562201 | 52562281 | 52562201 | ID=cds.MS.gene043703.t1;Parent=MS.gene043703.t1 |
| chr7.4 | exon | 52562566 | 52563004 | 52562566 | ID=MS.gene043703.t1.exon2;Parent=MS.gene043703.t1 |
| chr7.4 | CDS | 52562566 | 52563004 | 52562566 | ID=cds.MS.gene043703.t1;Parent=MS.gene043703.t1 |
| chr7.4 | exon | 52563485 | 52563606 | 52563485 | ID=MS.gene043703.t1.exon3;Parent=MS.gene043703.t1 |
| chr7.4 | CDS | 52563485 | 52563606 | 52563485 | ID=cds.MS.gene043703.t1;Parent=MS.gene043703.t1 |
| chr7.4 | exon | 52564948 | 52565242 | 52564948 | ID=MS.gene043703.t1.exon4;Parent=MS.gene043703.t1 |
| chr7.4 | CDS | 52564948 | 52565242 | 52564948 | ID=cds.MS.gene043703.t1;Parent=MS.gene043703.t1 |
| chr7.4 | exon | 52566283 | 52566328 | 52566283 | ID=MS.gene043703.t1.exon5;Parent=MS.gene043703.t1 |
| chr7.4 | CDS | 52566283 | 52566328 | 52566283 | ID=cds.MS.gene043703.t1;Parent=MS.gene043703.t1 |
| chr7.4 | exon | 52566447 | 52566508 | 52566447 | ID=MS.gene043703.t1.exon6;Parent=MS.gene043703.t1 |
| chr7.4 | CDS | 52566447 | 52566508 | 52566447 | ID=cds.MS.gene043703.t1;Parent=MS.gene043703.t1 |
| chr7.4 | exon | 52566643 | 52566650 | 52566643 | ID=MS.gene043703.t1.exon7;Parent=MS.gene043703.t1 |
| chr7.4 | CDS | 52566643 | 52566650 | 52566643 | ID=cds.MS.gene043703.t1;Parent=MS.gene043703.t1 |
| chr7.4 | exon | 52566779 | 52566928 | 52566779 | ID=MS.gene043703.t1.exon8;Parent=MS.gene043703.t1 |
| chr7.4 | CDS | 52566779 | 52566928 | 52566779 | ID=cds.MS.gene043703.t1;Parent=MS.gene043703.t1 |
| Gene Sequence |
| Protein sequence |
