Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043736.t1 | XP_003622663.1 | 88.4 | 303 | 32 | 1 | 1 | 300 | 1 | 303 | 1.20E-149 | 539.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043736.t1 | Q8L3W1 | 28.3 | 346 | 162 | 7 | 13 | 287 | 6 | 336 | 1.1e-26 | 122.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043736.t1 | G7KVV4 | 88.4 | 303 | 32 | 1 | 1 | 300 | 1 | 303 | 8.5e-150 | 539.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene043736.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043736.t1 | MTR_7g050560 | 88.449 | 303 | 32 | 1 | 1 | 300 | 1 | 303 | 0.0 | 551 |
| MS.gene043736.t1 | MTR_7g050590 | 75.168 | 298 | 52 | 6 | 28 | 304 | 1 | 297 | 2.49e-156 | 438 |
| MS.gene043736.t1 | MTR_7g050710 | 65.231 | 325 | 91 | 6 | 1 | 304 | 1 | 324 | 9.09e-143 | 405 |
| MS.gene043736.t1 | MTR_3g098790 | 64.706 | 323 | 88 | 6 | 1 | 304 | 1 | 316 | 1.06e-139 | 397 |
| MS.gene043736.t1 | MTR_7g050580 | 65.094 | 318 | 78 | 6 | 1 | 300 | 1 | 303 | 1.44e-138 | 394 |
| MS.gene043736.t1 | MTR_7g050720 | 60.510 | 314 | 93 | 8 | 7 | 289 | 4 | 317 | 2.60e-123 | 355 |
| MS.gene043736.t1 | MTR_8g103940 | 36.066 | 305 | 157 | 5 | 11 | 287 | 37 | 331 | 2.78e-53 | 181 |
| MS.gene043736.t1 | MTR_1g108780 | 33.218 | 289 | 152 | 6 | 29 | 287 | 13 | 290 | 1.74e-47 | 165 |
| MS.gene043736.t1 | MTR_1g035460 | 33.893 | 298 | 148 | 7 | 28 | 287 | 1 | 287 | 6.86e-47 | 162 |
| MS.gene043736.t1 | MTR_3g061370 | 34.915 | 295 | 153 | 8 | 11 | 286 | 7 | 281 | 1.39e-43 | 150 |
| MS.gene043736.t1 | MTR_5g044670 | 31.333 | 300 | 183 | 6 | 13 | 294 | 16 | 310 | 3.44e-43 | 151 |
| MS.gene043736.t1 | MTR_7g050640 | 64.602 | 113 | 40 | 0 | 1 | 113 | 1 | 113 | 3.59e-43 | 144 |
| MS.gene043736.t1 | MTR_3g061320 | 36.149 | 296 | 145 | 11 | 10 | 286 | 9 | 279 | 2.08e-42 | 147 |
| MS.gene043736.t1 | MTR_3g061350 | 33.876 | 307 | 159 | 9 | 1 | 286 | 1 | 284 | 1.24e-40 | 143 |
| MS.gene043736.t1 | MTR_3g061310 | 32.215 | 298 | 160 | 10 | 10 | 286 | 9 | 285 | 1.01e-35 | 130 |
| MS.gene043736.t1 | MTR_3g061340 | 32.517 | 286 | 164 | 9 | 10 | 286 | 9 | 274 | 9.83e-35 | 127 |
| MS.gene043736.t1 | MTR_1g035620 | 30.640 | 297 | 160 | 9 | 10 | 285 | 6 | 277 | 3.42e-34 | 129 |
| MS.gene043736.t1 | MTR_1g050845 | 32.394 | 284 | 160 | 8 | 10 | 285 | 6 | 265 | 2.19e-32 | 127 |
| MS.gene043736.t1 | MTR_3g061330 | 32.927 | 246 | 131 | 6 | 10 | 238 | 9 | 237 | 1.05e-31 | 119 |
| MS.gene043736.t1 | MTR_1g035640 | 33.448 | 290 | 172 | 11 | 13 | 293 | 9 | 286 | 1.65e-31 | 122 |
| MS.gene043736.t1 | MTR_6g043890 | 31.095 | 283 | 171 | 8 | 11 | 273 | 13 | 291 | 9.30e-31 | 118 |
| MS.gene043736.t1 | MTR_5g070440 | 27.526 | 287 | 163 | 7 | 13 | 290 | 21 | 271 | 2.92e-30 | 115 |
| MS.gene043736.t1 | MTR_3g005480 | 27.875 | 287 | 154 | 9 | 13 | 290 | 21 | 263 | 2.85e-29 | 112 |
| MS.gene043736.t1 | MTR_3g061290 | 52.941 | 102 | 46 | 1 | 10 | 111 | 9 | 108 | 1.11e-28 | 109 |
| MS.gene043736.t1 | MTR_3g005490 | 27.178 | 287 | 155 | 8 | 13 | 290 | 21 | 262 | 3.83e-28 | 109 |
| MS.gene043736.t1 | MTR_6g061070 | 29.595 | 321 | 174 | 11 | 7 | 286 | 12 | 321 | 3.83e-28 | 113 |
| MS.gene043736.t1 | MTR_1g035570 | 30.282 | 284 | 170 | 7 | 22 | 287 | 14 | 287 | 5.63e-27 | 109 |
| MS.gene043736.t1 | MTR_4g119990 | 29.180 | 305 | 181 | 9 | 11 | 286 | 13 | 311 | 1.37e-26 | 107 |
| MS.gene043736.t1 | MTR_3g005420 | 26.882 | 279 | 175 | 5 | 13 | 290 | 289 | 539 | 2.03e-24 | 103 |
| MS.gene043736.t1 | MTR_3g005420 | 26.136 | 264 | 143 | 8 | 13 | 274 | 40 | 253 | 1.01e-16 | 80.9 |
| MS.gene043736.t1 | MTR_3g005460 | 26.552 | 290 | 174 | 8 | 11 | 290 | 260 | 520 | 2.94e-23 | 99.8 |
| MS.gene043736.t1 | MTR_3g005460 | 24.731 | 279 | 142 | 7 | 13 | 282 | 25 | 244 | 6.20e-18 | 84.3 |
| MS.gene043736.t1 | MTR_3g061220 | 41.270 | 126 | 57 | 3 | 10 | 135 | 9 | 117 | 2.38e-22 | 90.1 |
| MS.gene043736.t1 | MTR_1g021270 | 26.567 | 335 | 175 | 12 | 27 | 296 | 29 | 357 | 5.86e-22 | 96.3 |
| MS.gene043736.t1 | MTR_1g035480 | 38.255 | 149 | 78 | 4 | 9 | 157 | 13 | 147 | 1.11e-21 | 90.5 |
| MS.gene043736.t1 | MTR_1g021360 | 29.104 | 268 | 170 | 9 | 24 | 274 | 193 | 457 | 2.41e-21 | 94.0 |
| MS.gene043736.t1 | MTR_1g021360 | 26.429 | 280 | 166 | 9 | 11 | 283 | 24 | 270 | 3.15e-12 | 67.0 |
| MS.gene043736.t1 | MTR_1g034240 | 42.424 | 99 | 57 | 0 | 13 | 111 | 7 | 105 | 3.75e-21 | 93.2 |
| MS.gene043736.t1 | MTR_1g034240 | 31.298 | 131 | 79 | 4 | 168 | 293 | 274 | 398 | 3.00e-11 | 63.9 |
| MS.gene043736.t1 | MTR_4g068320 | 41.905 | 105 | 59 | 1 | 13 | 115 | 6 | 110 | 7.20e-21 | 92.4 |
| MS.gene043736.t1 | MTR_4g068320 | 32.500 | 120 | 74 | 3 | 174 | 292 | 280 | 393 | 3.70e-12 | 66.6 |
| MS.gene043736.t1 | MTR_1g035650 | 31.222 | 221 | 102 | 5 | 10 | 203 | 6 | 203 | 3.58e-19 | 84.3 |
| MS.gene043736.t1 | MTR_3g005495 | 29.771 | 262 | 141 | 8 | 13 | 274 | 243 | 461 | 4.84e-19 | 87.4 |
| MS.gene043736.t1 | MTR_3g005495 | 37.209 | 86 | 54 | 0 | 29 | 114 | 29 | 114 | 8.97e-16 | 77.8 |
| MS.gene043736.t1 | MTR_1g035500 | 35.484 | 155 | 86 | 4 | 7 | 161 | 19 | 159 | 4.06e-18 | 80.9 |
| MS.gene043736.t1 | MTR_1g021400 | 23.145 | 337 | 203 | 9 | 11 | 295 | 28 | 360 | 1.13e-17 | 82.8 |
| MS.gene043736.t1 | MTR_1g033740 | 28.947 | 190 | 116 | 5 | 9 | 198 | 18 | 188 | 1.60e-17 | 79.3 |
| MS.gene043736.t1 | MTR_1g035520 | 28.713 | 303 | 164 | 10 | 28 | 285 | 87 | 382 | 7.43e-17 | 80.5 |
| MS.gene043736.t1 | MTR_3g005420 | 26.136 | 264 | 143 | 8 | 13 | 274 | 21 | 234 | 1.40e-16 | 80.1 |
| MS.gene043736.t1 | MTR_1g021380 | 23.548 | 310 | 186 | 7 | 16 | 279 | 20 | 324 | 1.75e-16 | 79.3 |
| MS.gene043736.t1 | MTR_1g034210 | 38.384 | 99 | 59 | 1 | 13 | 111 | 7 | 103 | 2.40e-16 | 78.6 |
| MS.gene043736.t1 | MTR_1g034210 | 38.384 | 99 | 59 | 1 | 13 | 111 | 7 | 103 | 4.01e-16 | 78.2 |
| MS.gene043736.t1 | MTR_1g035510 | 37.692 | 130 | 65 | 4 | 28 | 157 | 1 | 114 | 1.06e-15 | 75.1 |
| MS.gene043736.t1 | MTR_3g005440 | 34.783 | 92 | 60 | 0 | 27 | 118 | 34 | 125 | 1.35e-15 | 77.0 |
| MS.gene043736.t1 | MTR_3g005440 | 32.500 | 120 | 80 | 1 | 7 | 125 | 235 | 354 | 1.92e-13 | 70.9 |
| MS.gene043736.t1 | MTR_1g035440 | 40.952 | 105 | 61 | 1 | 11 | 114 | 13 | 117 | 4.98e-15 | 73.6 |
| MS.gene043736.t1 | MTR_1g021320 | 25.131 | 191 | 121 | 4 | 14 | 183 | 184 | 373 | 7.68e-13 | 69.3 |
| MS.gene043736.t1 | MTR_1g021320 | 30.612 | 147 | 95 | 2 | 11 | 151 | 23 | 168 | 3.27e-11 | 64.3 |
| MS.gene043736.t1 | MTR_1g021320 | 31.618 | 136 | 81 | 4 | 153 | 279 | 462 | 594 | 5.60e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043736.t1 | AT3G18990 | 45.455 | 99 | 54 | 0 | 13 | 111 | 6 | 104 | 4.45e-23 | 97.8 |
| MS.gene043736.t1 | AT4G01580 | 41.905 | 105 | 61 | 0 | 12 | 116 | 29 | 133 | 7.98e-23 | 93.6 |
| MS.gene043736.t1 | AT3G18990 | 45.455 | 99 | 54 | 0 | 13 | 111 | 6 | 104 | 8.44e-23 | 97.4 |
| MS.gene043736.t1 | AT3G18990 | 30.380 | 158 | 97 | 4 | 137 | 290 | 191 | 339 | 4.36e-12 | 66.6 |
| MS.gene043736.t1 | AT3G18960 | 40.952 | 105 | 62 | 0 | 12 | 116 | 29 | 133 | 1.58e-21 | 90.5 |
| MS.gene043736.t1 | AT3G18960 | 40.952 | 105 | 62 | 0 | 12 | 116 | 29 | 133 | 1.89e-21 | 90.5 |
| MS.gene043736.t1 | AT1G49475 | 42.718 | 103 | 58 | 1 | 12 | 114 | 33 | 134 | 4.20e-21 | 89.0 |
| MS.gene043736.t1 | AT3G18960 | 44.318 | 88 | 49 | 0 | 29 | 116 | 9 | 96 | 1.45e-17 | 79.0 |
| MS.gene043736.t1 | AT4G31640 | 27.444 | 266 | 143 | 12 | 13 | 274 | 14 | 233 | 4.52e-13 | 69.3 |
| MS.gene043736.t1 | AT1G49480 | 29.412 | 153 | 97 | 4 | 138 | 287 | 77 | 221 | 3.01e-12 | 65.5 |
| MS.gene043736.t1 | AT1G49480 | 29.412 | 153 | 97 | 4 | 138 | 287 | 77 | 221 | 3.01e-12 | 65.5 |
| MS.gene043736.t1 | AT1G49480 | 29.412 | 153 | 97 | 4 | 138 | 287 | 77 | 221 | 3.01e-12 | 65.5 |
| MS.gene043736.t1 | AT4G31650 | 23.311 | 296 | 198 | 8 | 13 | 283 | 152 | 443 | 2.13e-11 | 64.7 |
| MS.gene043736.t1 | AT3G53310 | 34.615 | 104 | 65 | 3 | 1 | 104 | 1 | 101 | 2.97e-11 | 63.5 |
| MS.gene043736.t1 | AT5G18000 | 22.837 | 289 | 189 | 9 | 13 | 277 | 20 | 298 | 6.67e-11 | 62.4 |
Find 46 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATAAAACTGTGTTCCTTTA+AGG | 0.118190 | 7.4:+53124814 | None:intergenic |
| TGTTGTTAAATGAAGGAATT+TGG | 0.170862 | 7.4:-53124863 | MS.gene043736:CDS |
| TTTCATCAACCACATGAAAT+TGG | 0.203922 | 7.4:-53125803 | MS.gene043736:CDS |
| TATTTCTCCACAAACTTTCT+TGG | 0.217927 | 7.4:+53126118 | None:intergenic |
| TGGAAAATGGAAATTAAATT+TGG | 0.234349 | 7.4:-53126050 | MS.gene043736:CDS |
| CTAATCAGGATGACCCTTAA+AGG | 0.282500 | 7.4:-53124828 | MS.gene043736:CDS |
| AGACTCCAAATGGTGGAAAA+TGG | 0.283126 | 7.4:-53126063 | MS.gene043736:CDS |
| TCTAGCTCATGGCCATCTTC+TGG | 0.291706 | 7.4:-53125966 | MS.gene043736:CDS |
| AGAAAGTTTGTGGAGAAATA+TGG | 0.293086 | 7.4:-53126115 | MS.gene043736:CDS |
| CTTTAAGGGTCATCCTGATT+AGG | 0.302875 | 7.4:+53124829 | None:intergenic |
| CGTGGAACACCGATTTCTTA+TGG | 0.302917 | 7.4:-53125331 | MS.gene043736:intron |
| GAATGGATAATTTATCTCTA+AGG | 0.305393 | 7.4:+53125889 | None:intergenic |
| CCAAAGAGTTTCAGCCAAAA+AGG | 0.320518 | 7.4:-53125867 | MS.gene043736:CDS |
| ATAAAACTGTGTTCCTTTAA+GGG | 0.321587 | 7.4:+53124815 | None:intergenic |
| CAGAATATACCAGTTAAGTT+TGG | 0.352430 | 7.4:-53124930 | MS.gene043736:CDS |
| TGAAGTTGAGAAATTGAATA+AGG | 0.355428 | 7.4:-53125765 | MS.gene043736:CDS |
| ATCCTGATTAGGTACTTTGC+AGG | 0.384916 | 7.4:+53124840 | None:intergenic |
| TGGTAAGACACACTTTGATT+TGG | 0.385393 | 7.4:-53124910 | MS.gene043736:CDS |
| TGTGTCTTACCAAACTTAAC+TGG | 0.416239 | 7.4:+53124921 | None:intergenic |
| TGGCAAAATATGGTTAGAAA+AGG | 0.418823 | 7.4:-53126017 | MS.gene043736:CDS |
| GTTTATTTGTTGTTAAATGA+AGG | 0.421453 | 7.4:-53124870 | MS.gene043736:CDS |
| GGCCTGCAAAGTACCTAATC+AGG | 0.423211 | 7.4:-53124842 | MS.gene043736:CDS |
| TGCAACTTACCATAAGAAAT+CGG | 0.425819 | 7.4:+53125322 | None:intergenic |
| GATGATGCCAAGAAAGTTTG+TGG | 0.440968 | 7.4:-53126125 | MS.gene043736:CDS |
| GGCAAAATATGGTTAGAAAA+GGG | 0.465141 | 7.4:-53126016 | MS.gene043736:CDS |
| GATATTTGAAAACCAGAAGA+TGG | 0.469802 | 7.4:+53125954 | None:intergenic |
| ATATATCTAAAGACTCCAAA+TGG | 0.494837 | 7.4:-53126073 | MS.gene043736:CDS |
| AAGGACAATAACTTGAAAGT+TGG | 0.499244 | 7.4:-53124765 | MS.gene043736:CDS |
| TTGGCTGAAACTCTTTGGAA+TGG | 0.508092 | 7.4:+53125872 | None:intergenic |
| TCTAAAGATGTGCACAATGA+AGG | 0.513673 | 7.4:+53124701 | None:intergenic |
| CGCATGACAGCAACAAAGGA+TGG | 0.517132 | 7.4:+53125363 | None:intergenic |
| AAATATGGTTAGAAAAGGGT+TGG | 0.518334 | 7.4:-53126012 | MS.gene043736:CDS |
| TTATCTCACAACTGGATGGA+AGG | 0.543919 | 7.4:-53124796 | MS.gene043736:CDS |
| AGGTCTCCAATGGTCAAAAG+AGG | 0.549419 | 7.4:-53125847 | MS.gene043736:CDS |
| CTTGCTCAAAATCTTCATGA+AGG | 0.562390 | 7.4:-53127935 | MS.gene043736:CDS |
| TTTGATTTGGATAAGAAGAG+AGG | 0.576081 | 7.4:-53124897 | MS.gene043736:CDS |
| GAGCGTCATTCTCTAGCTCA+TGG | 0.576216 | 7.4:-53125977 | MS.gene043736:CDS |
| TTTGTGGAGAAATATGGAGA+AGG | 0.578281 | 7.4:-53126109 | MS.gene043736:CDS |
| CTATTGCTTCCAATTTCATG+TGG | 0.602047 | 7.4:+53125794 | None:intergenic |
| GTAGCAACTTTGCATCATGC+TGG | 0.604292 | 7.4:-53125743 | MS.gene043736:CDS |
| TATCTAAAGACTCCAAATGG+TGG | 0.617671 | 7.4:-53126070 | MS.gene043736:CDS |
| TGGTTGATGAAATTCAAAAG+AGG | 0.621012 | 7.4:+53125814 | None:intergenic |
| TGCACGCATGACAGCAACAA+AGG | 0.634058 | 7.4:+53125359 | None:intergenic |
| TGGATGGAAGGCATTTGCAA+AGG | 0.644602 | 7.4:-53124784 | MS.gene043736:CDS |
| TGTCATGCGTGCATCATACG+TGG | 0.717271 | 7.4:-53125349 | MS.gene043736:CDS |
| CATGCTGGCAGAGAGTCCAG+AGG | 0.744660 | 7.4:-53125728 | MS.gene043736:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACAATAATAAAAAATGTT+AGG | + | chr7.4:53125516-53125535 | None:intergenic | 10.0% |
| !! | AAATGAAAAACTAAAAATCT+TGG | - | chr7.4:53125256-53125275 | MS.gene043736:intron | 15.0% |
| !! | ATTATCACATAAATGTTTAT+TGG | - | chr7.4:53127542-53127561 | MS.gene043736:intron | 15.0% |
| !! | TTAAGAAAAAAAGTTCAAAT+TGG | + | chr7.4:53126062-53126081 | None:intergenic | 15.0% |
| !!! | CATTTATCTTTTTTTTTGAT+TGG | - | chr7.4:53127680-53127699 | MS.gene043736:intron | 15.0% |
| !! | AAAAATGATAATACAGATTG+AGG | + | chr7.4:53127001-53127020 | None:intergenic | 20.0% |
| !! | AAAAATTAGAAAGTTCTTGT+TGG | + | chr7.4:53127651-53127670 | None:intergenic | 20.0% |
| !! | AATAATGATAGAATTAGACA+AGG | + | chr7.4:53125562-53125581 | None:intergenic | 20.0% |
| !! | ACTTGAAATTTACAAAAAGA+TGG | - | chr7.4:53125023-53125042 | MS.gene043736:intron | 20.0% |
| !! | AGTAATTATTCTGATAAATG+TGG | - | chr7.4:53126419-53126438 | MS.gene043736:intron | 20.0% |
| !! | TACTATCATGTATACTAATT+TGG | - | chr7.4:53126470-53126489 | MS.gene043736:intron | 20.0% |
| !! | TGGAAAATGGAAATTAAATT+TGG | - | chr7.4:53126583-53126602 | MS.gene043736:intron | 20.0% |
| !! | TTAAATTTGGTAAAAAGTGA+TGG | - | chr7.4:53126596-53126615 | MS.gene043736:intron | 20.0% |
| !!! | AGCATTATTACCTTTTTTTT+GGG | - | chr7.4:53125859-53125878 | MS.gene043736:CDS | 20.0% |
| !!! | ATATAAATGCTATTTAACAG+GGG | - | chr7.4:53126175-53126194 | MS.gene043736:intron | 20.0% |
| !!! | GATATAAATGCTATTTAACA+GGG | - | chr7.4:53126174-53126193 | MS.gene043736:intron | 20.0% |
| !!! | GTTTATTTGTTGTTAAATGA+AGG | - | chr7.4:53127763-53127782 | MS.gene043736:intron | 20.0% |
| !!! | TAAGCAAAAATGTACTTTTT+AGG | + | chr7.4:53125445-53125464 | None:intergenic | 20.0% |
| !!! | TAAGCAAAATTTCACTTTTT+AGG | - | chr7.4:53125356-53125375 | MS.gene043736:CDS | 20.0% |
| !!! | TAATTTTGAGTTAGATTCTT+TGG | - | chr7.4:53124766-53124785 | MS.gene043736:CDS | 20.0% |
| !!! | TAGCATTATTACCTTTTTTT+TGG | - | chr7.4:53125858-53125877 | MS.gene043736:CDS | 20.0% |
| !!! | TGATATAAATGCTATTTAAC+AGG | - | chr7.4:53126173-53126192 | MS.gene043736:intron | 20.0% |
| !!! | TGTAAATAAAAATTCGAGTT+TGG | - | chr7.4:53126281-53126300 | MS.gene043736:intron | 20.0% |
| ! | AAATTCAATCCATCATAATC+CGG | + | chr7.4:53125686-53125705 | None:intergenic | 25.0% |
| ! | ATAAAACTGTGTTCCTTTAA+GGG | + | chr7.4:53127821-53127840 | None:intergenic | 25.0% |
| ! | ATAATTGAGAAAAATGCACA+TGG | - | chr7.4:53126202-53126221 | MS.gene043736:intron | 25.0% |
| ! | ATATATCTAAAGACTCCAAA+TGG | - | chr7.4:53126560-53126579 | MS.gene043736:intron | 25.0% |
| ! | ATCGTAATCACTTGAAAATT+GGG | - | chr7.4:53125160-53125179 | MS.gene043736:intron | 25.0% |
| ! | CAAGTATTATCTTGAAAAAG+CGG | + | chr7.4:53124682-53124701 | None:intergenic | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | + | chr7.4:53125420-53125439 | None:intergenic | 25.0% |
| ! | GAATGGATAATTTATCTCTA+AGG | + | chr7.4:53126747-53126766 | None:intergenic | 25.0% |
| ! | GACATATGAGCTTATATTTA+GGG | - | chr7.4:53126230-53126249 | MS.gene043736:intron | 25.0% |
| ! | TAAAAAGTGATGGCAAAATA+TGG | - | chr7.4:53126606-53126625 | MS.gene043736:intron | 25.0% |
| ! | TAATTTGACAGTGATTATTG+TGG | + | chr7.4:53125076-53125095 | None:intergenic | 25.0% |
| ! | TATCGTAATCACTTGAAAAT+TGG | - | chr7.4:53125159-53125178 | MS.gene043736:intron | 25.0% |
| ! | TATTATGACACAAGATTTGT+TGG | - | chr7.4:53124859-53124878 | MS.gene043736:CDS | 25.0% |
| ! | TATTCTGATAAATGTGGTTT+AGG | - | chr7.4:53126425-53126444 | MS.gene043736:intron | 25.0% |
| ! | TGAAAAATTGCACCATATAT+CGG | - | chr7.4:53125641-53125660 | MS.gene043736:intron | 25.0% |
| ! | TGAAATTTACAAAAAGATGG+AGG | - | chr7.4:53125026-53125045 | MS.gene043736:intron | 25.0% |
| ! | TGAAGTTGAGAAATTGAATA+AGG | - | chr7.4:53126868-53126887 | MS.gene043736:intron | 25.0% |
| ! | TGCAAAATTTGAACTCAATA+AGG | + | chr7.4:53127190-53127209 | None:intergenic | 25.0% |
| ! | TGTTGTTAAATGAAGGAATT+TGG | - | chr7.4:53127770-53127789 | MS.gene043736:intron | 25.0% |
| !! | ATTTTGCTTATAATAGTGAC+CGG | + | chr7.4:53125346-53125365 | None:intergenic | 25.0% |
| !! | TATTGAGTTCAAATTTTGCA+GGG | - | chr7.4:53127190-53127209 | MS.gene043736:intron | 25.0% |
| !! | TTATTGAGTTCAAATTTTGC+AGG | - | chr7.4:53127189-53127208 | MS.gene043736:intron | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | - | chr7.4:53125455-53125474 | MS.gene043736:intron | 25.0% |
| !!! | AATCAACATACATTTTTAGC+AGG | - | chr7.4:53127122-53127141 | MS.gene043736:intron | 25.0% |
| !!! | AATTACTTAGTTTTCCAATC+AGG | + | chr7.4:53126406-53126425 | None:intergenic | 25.0% |
| !!! | AATTGACATACATTTTTAGC+TGG | + | chr7.4:53127094-53127113 | None:intergenic | 25.0% |
| !!! | ACAATGTTTTTTTCCTCAAA+AGG | - | chr7.4:53126253-53126272 | MS.gene043736:intron | 25.0% |
| !!! | ATAAGTTGATATAGGACTTA+TGG | + | chr7.4:53125929-53125948 | None:intergenic | 25.0% |
| !!! | ATTTTGGCATAAGTTGATAT+AGG | + | chr7.4:53125937-53125956 | None:intergenic | 25.0% |
| !!! | CAATGTTTTTTTCCTCAAAA+GGG | - | chr7.4:53126254-53126273 | MS.gene043736:intron | 25.0% |
| AAACCAGCAAGTAATTAACT+TGG | - | chr7.4:53126099-53126118 | MS.gene043736:CDS | 30.0% | |
| AAAGATAAACTCAAAGAGCA+TGG | - | chr7.4:53124964-53124983 | MS.gene043736:intron | 30.0% | |
| AAATATGGTTAGAAAAGGGT+TGG | - | chr7.4:53126621-53126640 | MS.gene043736:intron | 30.0% | |
| AAATGTATGTCAATTCAACG+AGG | - | chr7.4:53127099-53127118 | MS.gene043736:intron | 30.0% | |
| AAATGTTAGGACTTGAAAAG+TGG | + | chr7.4:53125503-53125522 | None:intergenic | 30.0% | |
| AAGGACAATAACTTGAAAGT+TGG | - | chr7.4:53127868-53127887 | MS.gene043736:intron | 30.0% | |
| AAGTGATTACGATAGATGTA+TGG | + | chr7.4:53125153-53125172 | None:intergenic | 30.0% | |
| AATGTTAGGACTTGAAAAGT+GGG | + | chr7.4:53125502-53125521 | None:intergenic | 30.0% | |
| ACTATTGTAGAACAGCTATT+AGG | - | chr7.4:53127064-53127083 | MS.gene043736:intron | 30.0% | |
| AGAAAGTTTGTGGAGAAATA+TGG | - | chr7.4:53126518-53126537 | MS.gene043736:intron | 30.0% | |
| AGGTAATAATGCTACTAACT+AGG | + | chr7.4:53125852-53125871 | None:intergenic | 30.0% | |
| ATCATAAACTCACACATAAG+TGG | + | chr7.4:53125985-53126004 | None:intergenic | 30.0% | |
| ATGGTAAGTTGCAAAAAAAG+TGG | - | chr7.4:53127321-53127340 | MS.gene043736:intron | 30.0% | |
| ATTATCTTGAAAAAGCGGAT+TGG | + | chr7.4:53124677-53124696 | None:intergenic | 30.0% | |
| ATTGGACTATCAAAATGGAA+GGG | - | chr7.4:53126146-53126165 | MS.gene043736:intron | 30.0% | |
| CAAGTCCATCATAAAATTAG+TGG | + | chr7.4:53126308-53126327 | None:intergenic | 30.0% | |
| CAGAATATACCAGTTAAGTT+TGG | - | chr7.4:53127703-53127722 | MS.gene043736:intron | 30.0% | |
| CATTCACTAAATGATGTATG+TGG | - | chr7.4:53125381-53125400 | MS.gene043736:CDS | 30.0% | |
| CCAAAAAAAAAGTCACTACA+TGG | - | chr7.4:53126028-53126047 | MS.gene043736:CDS | 30.0% | |
| CGACATATGAGCTTATATTT+AGG | - | chr7.4:53126229-53126248 | MS.gene043736:intron | 30.0% | |
| CTATTGTAGAACAGCTATTA+GGG | - | chr7.4:53127065-53127084 | MS.gene043736:intron | 30.0% | |
| GACATATTGGACTATCAAAA+TGG | - | chr7.4:53126141-53126160 | MS.gene043736:intron | 30.0% | |
| GATAAAACTGTGTTCCTTTA+AGG | + | chr7.4:53127822-53127841 | None:intergenic | 30.0% | |
| GATATTTGAAAACCAGAAGA+TGG | + | chr7.4:53126682-53126701 | None:intergenic | 30.0% | |
| GATGTATGTGGTCTATTTAA+TGG | - | chr7.4:53125393-53125412 | MS.gene043736:CDS | 30.0% | |
| GCAAGCAAAATACAAAGTAA+TGG | + | chr7.4:53124832-53124851 | None:intergenic | 30.0% | |
| GGCAAAATATGGTTAGAAAA+GGG | - | chr7.4:53126617-53126636 | MS.gene043736:intron | 30.0% | |
| GGTAATAATGCTACTAACTA+GGG | + | chr7.4:53125851-53125870 | None:intergenic | 30.0% | |
| GTAATAATGCTACTAACTAG+GGG | + | chr7.4:53125850-53125869 | None:intergenic | 30.0% | |
| GTTTCATTAGGCTACAAATT+TGG | + | chr7.4:53126335-53126354 | None:intergenic | 30.0% | |
| TAGCATGTATCATGACATAT+TGG | - | chr7.4:53126128-53126147 | MS.gene043736:intron | 30.0% | |
| TATCCAAGTTAATTACTTGC+TGG | + | chr7.4:53126105-53126124 | None:intergenic | 30.0% | |
| TATTGGACTATCAAAATGGA+AGG | - | chr7.4:53126145-53126164 | MS.gene043736:intron | 30.0% | |
| TATTTCTCCACAAACTTTCT+TGG | + | chr7.4:53126518-53126537 | None:intergenic | 30.0% | |
| TCAACTTATGCCAAAATGAT+CGG | - | chr7.4:53125940-53125959 | MS.gene043736:CDS | 30.0% | |
| TGCAACTTACCATAAGAAAT+CGG | + | chr7.4:53127314-53127333 | None:intergenic | 30.0% | |
| TGGCAAAATATGGTTAGAAA+AGG | - | chr7.4:53126616-53126635 | MS.gene043736:intron | 30.0% | |
| TTTCATCAACCACATGAAAT+TGG | - | chr7.4:53126830-53126849 | MS.gene043736:intron | 30.0% | |
| ! | AAGTTAATTACTTGCTGGTT+TGG | + | chr7.4:53126100-53126119 | None:intergenic | 30.0% |
| ! | AATTTCCATTTTCCACCATT+TGG | + | chr7.4:53126578-53126597 | None:intergenic | 30.0% |
| ! | TATTTACAAGTACCCTTTTG+AGG | + | chr7.4:53126269-53126288 | None:intergenic | 30.0% |
| ! | TTGGTCCACTAATTTTATGA+TGG | - | chr7.4:53126300-53126319 | MS.gene043736:intron | 30.0% |
| !! | TGGTTGATGAAATTCAAAAG+AGG | + | chr7.4:53126822-53126841 | None:intergenic | 30.0% |
| !! | TGTTCTACAATAGTTCTGAA+GGG | + | chr7.4:53127058-53127077 | None:intergenic | 30.0% |
| !! | TTTGATTTGGATAAGAAGAG+AGG | - | chr7.4:53127736-53127755 | MS.gene043736:intron | 30.0% |
| !!! | CCATGTAGTGACTTTTTTTT+TGG | + | chr7.4:53126031-53126050 | None:intergenic | 30.0% |
| AAAGAATTTCCCAGCTCAAA+TGG | - | chr7.4:53127492-53127511 | MS.gene043736:intron | 35.0% | |
| AACTTATGCCAAAATGATCG+GGG | - | chr7.4:53125942-53125961 | MS.gene043736:CDS | 35.0% | |
| AAGAACCAATTGGTATCAAC+GGG | + | chr7.4:53127466-53127485 | None:intergenic | 35.0% | |
| ATAAACTCACACATAAGTGG+AGG | + | chr7.4:53125982-53126001 | None:intergenic | 35.0% | |
| CAACTTATGCCAAAATGATC+GGG | - | chr7.4:53125941-53125960 | MS.gene043736:CDS | 35.0% | |
| CAAGAACCAATTGGTATCAA+CGG | + | chr7.4:53127467-53127486 | None:intergenic | 35.0% | |
| CGTGATAATCGTGTGAAAAA+CGG | + | chr7.4:53125797-53125816 | None:intergenic | 35.0% | |
| CTATTGCTTCCAATTTCATG+TGG | + | chr7.4:53126842-53126861 | None:intergenic | 35.0% | |
| CTTGCTCAAAATCTTCATGA+AGG | - | chr7.4:53124698-53124717 | MS.gene043736:CDS | 35.0% | |
| CTTTCTCAACAAGAACCAAT+TGG | + | chr7.4:53127476-53127495 | None:intergenic | 35.0% | |
| GTAGTGACATAGATGAGTAA+AGG | + | chr7.4:53125901-53125920 | None:intergenic | 35.0% | |
| GTCAGATATGTTCATTTACC+TGG | + | chr7.4:53125005-53125024 | None:intergenic | 35.0% | |
| GTGATAATCGTGTGAAAAAC+GGG | + | chr7.4:53125796-53125815 | None:intergenic | 35.0% | |
| TATCTAAAGACTCCAAATGG+TGG | - | chr7.4:53126563-53126582 | MS.gene043736:intron | 35.0% | |
| TATTTCCCGTTGATACCAAT+TGG | - | chr7.4:53127458-53127477 | MS.gene043736:intron | 35.0% | |
| TCATTAGGCTACAAATTTGG+TGG | + | chr7.4:53126332-53126351 | None:intergenic | 35.0% | |
| TCTAAAGATGTGCACAATGA+AGG | + | chr7.4:53127935-53127954 | None:intergenic | 35.0% | |
| TGAAAATTGGGAACATGTGA+AGG | - | chr7.4:53125199-53125218 | MS.gene043736:intron | 35.0% | |
| TGATTACGATAGATGTATGG+TGG | + | chr7.4:53125150-53125169 | None:intergenic | 35.0% | |
| TGCTACTGTACCCAAAAAAA+AGG | + | chr7.4:53125872-53125891 | None:intergenic | 35.0% | |
| TGGTAAGACACACTTTGATT+TGG | - | chr7.4:53127723-53127742 | MS.gene043736:intron | 35.0% | |
| TGTGTCTTACCAAACTTAAC+TGG | + | chr7.4:53127715-53127734 | None:intergenic | 35.0% | |
| TTGAGTTAGATTCTTTGGTC+AGG | - | chr7.4:53124771-53124790 | MS.gene043736:CDS | 35.0% | |
| TTTGACAGTGATTATTGTGG+TGG | + | chr7.4:53125073-53125092 | None:intergenic | 35.0% | |
| TTTGTGGAGAAATATGGAGA+AGG | - | chr7.4:53126524-53126543 | MS.gene043736:intron | 35.0% | |
| ! | ATCTTTCCTCTTTTGACCAT+TGG | + | chr7.4:53126795-53126814 | None:intergenic | 35.0% |
| ! | CGTTTTTCACACGATTATCA+CGG | - | chr7.4:53125795-53125814 | MS.gene043736:CDS | 35.0% |
| ! | GAGCACTTTTCAGTATTTGT+GGG | + | chr7.4:53125734-53125753 | None:intergenic | 35.0% |
| ! | GGTTAGAAATAGAAAGTGTG+AGG | - | chr7.4:53124893-53124912 | MS.gene043736:CDS | 35.0% |
| !! | ACACAGTTTTATCTCACAAC+TGG | - | chr7.4:53127829-53127848 | MS.gene043736:intron | 35.0% |
| !! | AGAGCACTTTTCAGTATTTG+TGG | + | chr7.4:53125735-53125754 | None:intergenic | 35.0% |
| !! | AGATTTGTTGGCATAGTTTG+TGG | - | chr7.4:53124871-53124890 | MS.gene043736:CDS | 35.0% |
| !! | AGTTTTATCTCACAACTGGA+TGG | - | chr7.4:53127833-53127852 | MS.gene043736:intron | 35.0% |
| !! | CTGTTCTACAATAGTTCTGA+AGG | + | chr7.4:53127059-53127078 | None:intergenic | 35.0% |
| !! | GATTTGTTGGCATAGTTTGT+GGG | - | chr7.4:53124872-53124891 | MS.gene043736:CDS | 35.0% |
| AATTTCCCAGCTCAAATGGA+GGG | - | chr7.4:53127496-53127515 | MS.gene043736:intron | 40.0% | |
| ACAGTTCCATTGAACAGTTC+CGG | - | chr7.4:53125664-53125683 | MS.gene043736:intron | 40.0% | |
| AGCCTAATGAAACTATGAGC+TGG | - | chr7.4:53126342-53126361 | MS.gene043736:intron | 40.0% | |
| ATAATGCTACTAACTAGGGG+TGG | + | chr7.4:53125847-53125866 | None:intergenic | 40.0% | |
| ATCCTGATTAGGTACTTTGC+AGG | + | chr7.4:53127796-53127815 | None:intergenic | 40.0% | |
| ATTTGTGGGTAGAAGTGGTT+CGG | + | chr7.4:53125720-53125739 | None:intergenic | 40.0% | |
| CAATGGAACTGTCCGATATA+TGG | + | chr7.4:53125656-53125675 | None:intergenic | 40.0% | |
| CACCAGCTCATAGTTTCATT+AGG | + | chr7.4:53126347-53126366 | None:intergenic | 40.0% | |
| CATAATCCGGAACTGTTCAA+TGG | + | chr7.4:53125673-53125692 | None:intergenic | 40.0% | |
| CCAAAGAGTTTCAGCCAAAA+AGG | - | chr7.4:53126766-53126785 | MS.gene043736:intron | 40.0% | |
| CTAATCAGGATGACCCTTAA+AGG | - | chr7.4:53127805-53127824 | MS.gene043736:intron | 40.0% | |
| GACACAAAATCTGATACCTC+TGG | + | chr7.4:53126924-53126943 | None:intergenic | 40.0% | |
| GATGATGCCAAGAAAGTTTG+TGG | - | chr7.4:53126508-53126527 | MS.gene043736:intron | 40.0% | |
| GGTTGCAAGTTGTATTGTTG+TGG | + | chr7.4:53125129-53125148 | None:intergenic | 40.0% | |
| TACTCAATTCGGCGTTAAGT+CGG | - | chr7.4:53126376-53126395 | MS.gene043736:intron | 40.0% | |
| TCACACGATTATCACGGTTT+CGG | - | chr7.4:53125801-53125820 | MS.gene043736:CDS | 40.0% | |
| TCAGTATTTGTGGGTAGAAG+TGG | + | chr7.4:53125725-53125744 | None:intergenic | 40.0% | |
| TGAACAGTTCCGGATTATGA+TGG | - | chr7.4:53125674-53125693 | MS.gene043736:intron | 40.0% | |
| TGCATCCTGCTTACTCAATT+CGG | - | chr7.4:53126365-53126384 | MS.gene043736:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | chr7.4:53125459-53125478 | MS.gene043736:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | + | chr7.4:53125478-53125459 | None:intergenic | 40.0% | |
| TTAGGACTTGAAAAGTGGGT+GGG | + | chr7.4:53125498-53125517 | None:intergenic | 40.0% | |
| TTATCTCACAACTGGATGGA+AGG | - | chr7.4:53127837-53127856 | MS.gene043736:intron | 40.0% | |
| TTCTTTCCATGATGTGTCGA+TGG | - | chr7.4:53127019-53127038 | MS.gene043736:intron | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr7.4:53125458-53125477 | MS.gene043736:intron | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | chr7.4:53125477-53125458 | None:intergenic | 40.0% | |
| ! | AACTACATATGCACTGACGA+AGG | - | chr7.4:53127351-53127370 | MS.gene043736:intron | 40.0% |
| ! | AGACTCCAAATGGTGGAAAA+TGG | - | chr7.4:53126570-53126589 | MS.gene043736:intron | 40.0% |
| ! | CTTTAAGGGTCATCCTGATT+AGG | + | chr7.4:53127807-53127826 | None:intergenic | 40.0% |
| ! | TGGATCTAGCTTACAAAACC+AGG | - | chr7.4:53124984-53125003 | MS.gene043736:intron | 40.0% |
| ! | TTGACCATTGGAGACCTTTT+TGG | + | chr7.4:53126783-53126802 | None:intergenic | 40.0% |
| ! | TTGGCTGAAACTCTTTGGAA+TGG | + | chr7.4:53126764-53126783 | None:intergenic | 40.0% |
| !!! | CCTTTTTGGCTGAAACTCTT+TGG | + | chr7.4:53126769-53126788 | None:intergenic | 40.0% |
| ACTCAATTCGGCGTTAAGTC+GGG | - | chr7.4:53126377-53126396 | MS.gene043736:intron | 45.0% | |
| AGGTCTCCAATGGTCAAAAG+AGG | - | chr7.4:53126786-53126805 | MS.gene043736:intron | 45.0% | |
| GAATTTCCCAGCTCAAATGG+AGG | - | chr7.4:53127495-53127514 | MS.gene043736:intron | 45.0% | |
| GAGTAGTTAGTCAGCTGCTA+TGG | - | chr7.4:53125608-53125627 | MS.gene043736:intron | 45.0% | |
| GATTATCACGGTTTCGGACT+GGG | - | chr7.4:53125807-53125826 | MS.gene043736:CDS | 45.0% | |
| GTAGCAACTTTGCATCATGC+TGG | - | chr7.4:53126890-53126909 | MS.gene043736:intron | 45.0% | |
| GTTAGGACTTGAAAAGTGGG+TGG | + | chr7.4:53125499-53125518 | None:intergenic | 45.0% | |
| TAACGCCGAATTGAGTAAGC+AGG | + | chr7.4:53126373-53126392 | None:intergenic | 45.0% | |
| TAAGACCCTCCATTTGAGCT+GGG | + | chr7.4:53127504-53127523 | None:intergenic | 45.0% | |
| TCAGCCAAAAAGGTCTCCAA+TGG | - | chr7.4:53126776-53126795 | MS.gene043736:intron | 45.0% | |
| TTAAGACCCTCCATTTGAGC+TGG | + | chr7.4:53127505-53127524 | None:intergenic | 45.0% | |
| ! | GGTTTGAACCCCGATCATTT+TGG | + | chr7.4:53125953-53125972 | None:intergenic | 45.0% |
| ! | TCACACATAAGTGGAGGTAC+CGG | + | chr7.4:53125976-53125995 | None:intergenic | 45.0% |
| !! | CGTGGAACACCGATTTCTTA+TGG | - | chr7.4:53127302-53127321 | MS.gene043736:intron | 45.0% |
| !! | TGGATGGAAGGCATTTGCAA+AGG | - | chr7.4:53127849-53127868 | MS.gene043736:intron | 45.0% |
| !! | AAAGTAATTAATTTAATTAA+AGG | - | chr7.4:53125302-53125321 | MS.gene043736:intron | 5.0% |
| !! | AAGTAATTAATTTAATTAAA+GGG | - | chr7.4:53125303-53125322 | MS.gene043736:intron | 5.0% |
| !!! | ATTTTTTTTTTTTTGAAAAT+TGG | - | chr7.4:53125186-53125205 | MS.gene043736:intron | 5.0% |
| !!! | TTTTTTTTTTTTTGAAAATT+GGG | - | chr7.4:53125187-53125206 | MS.gene043736:intron | 5.0% |
| AATGATCGGGGTTCAAACCC+CGG | - | chr7.4:53125954-53125973 | MS.gene043736:CDS | 50.0% | |
| AGCGGGTGGTTTCGGATAAT+CGG | + | chr7.4:53125767-53125786 | None:intergenic | 50.0% | |
| CGATTATCACGGTTTCGGAC+TGG | - | chr7.4:53125806-53125825 | MS.gene043736:CDS | 50.0% | |
| CGCATGACAGCAACAAAGGA+TGG | + | chr7.4:53127273-53127292 | None:intergenic | 50.0% | |
| CTTCGTCCATCGACACATCA+TGG | + | chr7.4:53127028-53127047 | None:intergenic | 50.0% | |
| GGATACAACTCTACACCCTC+CGG | + | chr7.4:53125477-53125496 | None:intergenic | 50.0% | |
| GGATAGAGACATACACCCTC+CGG | - | chr7.4:53125324-53125343 | MS.gene043736:intron | 50.0% | |
| TGCACGCATGACAGCAACAA+AGG | + | chr7.4:53127277-53127296 | None:intergenic | 50.0% | |
| TGTCATGCGTGCATCATACG+TGG | - | chr7.4:53127284-53127303 | MS.gene043736:intron | 50.0% | |
| ! | GAGCGTCATTCTCTAGCTCA+TGG | - | chr7.4:53126656-53126675 | MS.gene043736:intron | 50.0% |
| ! | GGCCTGCAAAGTACCTAATC+AGG | - | chr7.4:53127791-53127810 | MS.gene043736:intron | 50.0% |
| ! | TCTAGCTCATGGCCATCTTC+TGG | - | chr7.4:53126667-53126686 | MS.gene043736:intron | 50.0% |
| !! | ACACATAAGTGGAGGTACCG+GGG | + | chr7.4:53125974-53125993 | None:intergenic | 50.0% |
| !! | CACACATAAGTGGAGGTACC+GGG | + | chr7.4:53125975-53125994 | None:intergenic | 50.0% |
| GCGGGTGGTTTCGGATAATC+GGG | + | chr7.4:53125766-53125785 | None:intergenic | 55.0% | |
| GTTAAGTCGGGCGTCCTGAT+TGG | - | chr7.4:53126389-53126408 | MS.gene043736:intron | 55.0% | |
| ! | ACGGTTTCGGACTGGGTCAT+GGG | - | chr7.4:53125814-53125833 | MS.gene043736:CDS | 55.0% |
| !! | GTGAAAAACGGGCTGTCGAG+CGG | + | chr7.4:53125785-53125804 | None:intergenic | 55.0% |
| !! | TGAAAAACGGGCTGTCGAGC+GGG | + | chr7.4:53125784-53125803 | None:intergenic | 55.0% |
| CATGCTGGCAGAGAGTCCAG+AGG | - | chr7.4:53126905-53126924 | MS.gene043736:intron | 60.0% | |
| ! | CACGGTTTCGGACTGGGTCA+TGG | - | chr7.4:53125813-53125832 | MS.gene043736:CDS | 60.0% |
| ! | GTTTCGGACTGGGTCATGGG+TGG | - | chr7.4:53125817-53125836 | MS.gene043736:CDS | 60.0% |
| GGCTGTCGAGCGGGTGGTTT+CGG | + | chr7.4:53125775-53125794 | None:intergenic | 65.0% | |
| !! | AAAACGGGCTGTCGAGCGGG+TGG | + | chr7.4:53125781-53125800 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 53124647 | 53128008 | 53124647 | ID=MS.gene043736 |
| chr7.4 | mRNA | 53124647 | 53128008 | 53124647 | ID=MS.gene043736.t1;Parent=MS.gene043736 |
| chr7.4 | exon | 53127928 | 53128008 | 53127928 | ID=MS.gene043736.t1.exon1;Parent=MS.gene043736.t1 |
| chr7.4 | CDS | 53127928 | 53128008 | 53127928 | ID=cds.MS.gene043736.t1;Parent=MS.gene043736.t1 |
| chr7.4 | exon | 53125729 | 53126146 | 53125729 | ID=MS.gene043736.t1.exon2;Parent=MS.gene043736.t1 |
| chr7.4 | CDS | 53125729 | 53126146 | 53125729 | ID=cds.MS.gene043736.t1;Parent=MS.gene043736.t1 |
| chr7.4 | exon | 53125332 | 53125444 | 53125332 | ID=MS.gene043736.t1.exon3;Parent=MS.gene043736.t1 |
| chr7.4 | CDS | 53125332 | 53125444 | 53125332 | ID=cds.MS.gene043736.t1;Parent=MS.gene043736.t1 |
| chr7.4 | exon | 53124647 | 53124949 | 53124647 | ID=MS.gene043736.t1.exon4;Parent=MS.gene043736.t1 |
| chr7.4 | CDS | 53124647 | 53124949 | 53124647 | ID=cds.MS.gene043736.t1;Parent=MS.gene043736.t1 |
| Gene Sequence |
| Protein sequence |
