Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043931.t1 | XP_024632961.1 | 69.2 | 809 | 92 | 5 | 1 | 652 | 1 | 809 | 9.70E-306 | 1058.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043931.t1 | Q9SZL8 | 25.7 | 596 | 324 | 10 | 32 | 536 | 70 | 637 | 5.1e-53 | 210.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043931.t1 | D3YBB9 | 63.2 | 764 | 152 | 3 | 1 | 635 | 49 | 812 | 7.6e-268 | 932.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene043931.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043931.t1 | MTR_0558s0020 | 85.135 | 296 | 43 | 1 | 1 | 295 | 1 | 296 | 0.0 | 529 |
MS.gene043931.t1 | MTR_1g083640 | 80.634 | 284 | 39 | 1 | 1 | 268 | 1 | 284 | 6.52e-166 | 477 |
MS.gene043931.t1 | MTR_8g446020 | 72.203 | 295 | 43 | 1 | 1 | 295 | 1 | 256 | 9.33e-148 | 429 |
MS.gene043931.t1 | MTR_6g090505 | 82.278 | 237 | 42 | 0 | 65 | 301 | 1 | 237 | 7.99e-141 | 416 |
MS.gene043931.t1 | MTR_2g014100 | 80.000 | 245 | 40 | 1 | 1 | 236 | 1 | 245 | 7.16e-138 | 404 |
MS.gene043931.t1 | MTR_0337s0040 | 71.264 | 261 | 35 | 2 | 1 | 260 | 1 | 222 | 3.97e-121 | 360 |
MS.gene043931.t1 | MTR_3g008240 | 82.759 | 203 | 34 | 1 | 1 | 202 | 1 | 203 | 8.11e-114 | 340 |
MS.gene043931.t1 | MTR_4g040430 | 81.188 | 202 | 34 | 1 | 1 | 202 | 1 | 198 | 1.24e-112 | 337 |
MS.gene043931.t1 | MTR_3g028680 | 82.065 | 184 | 30 | 1 | 489 | 669 | 1 | 184 | 6.52e-102 | 309 |
MS.gene043931.t1 | MTR_2g067090 | 80.110 | 181 | 33 | 1 | 492 | 669 | 99 | 279 | 3.33e-93 | 290 |
MS.gene043931.t1 | MTR_5g071590 | 71.111 | 180 | 39 | 2 | 1 | 167 | 1 | 180 | 9.43e-85 | 265 |
MS.gene043931.t1 | MTR_1g055240 | 86.620 | 142 | 19 | 0 | 91 | 232 | 3 | 144 | 1.88e-84 | 262 |
MS.gene043931.t1 | MTR_0019s0290 | 80.921 | 152 | 29 | 0 | 82 | 233 | 9 | 160 | 1.05e-83 | 261 |
MS.gene043931.t1 | MTR_4g133495 | 64.088 | 181 | 39 | 2 | 447 | 624 | 88 | 245 | 1.27e-68 | 226 |
MS.gene043931.t1 | MTR_4g133340 | 64.088 | 181 | 39 | 2 | 447 | 624 | 88 | 245 | 1.27e-68 | 226 |
MS.gene043931.t1 | MTR_1281s0010 | 77.064 | 109 | 25 | 0 | 19 | 127 | 1 | 109 | 6.08e-53 | 177 |
MS.gene043931.t1 | MTR_0337s0060 | 54.386 | 171 | 19 | 3 | 463 | 630 | 125 | 239 | 1.91e-43 | 156 |
MS.gene043931.t1 | MTR_6g051425 | 32.188 | 320 | 182 | 7 | 40 | 341 | 22 | 324 | 1.47e-39 | 149 |
MS.gene043931.t1 | MTR_2g067130 | 68.224 | 107 | 28 | 2 | 566 | 669 | 46 | 149 | 1.58e-36 | 134 |
MS.gene043931.t1 | MTR_4g008820 | 81.250 | 80 | 14 | 1 | 1 | 79 | 125 | 204 | 1.19e-29 | 125 |
MS.gene043931.t1 | MTR_8g046060 | 72.727 | 88 | 15 | 2 | 1 | 79 | 91 | 178 | 2.54e-28 | 113 |
MS.gene043931.t1 | MTR_1g070355 | 26.415 | 318 | 209 | 7 | 49 | 362 | 88 | 384 | 3.66e-17 | 85.9 |
MS.gene043931.t1 | MTR_0402s0040 | 26.882 | 186 | 115 | 5 | 49 | 233 | 40 | 205 | 5.90e-15 | 78.6 |
MS.gene043931.t1 | MTR_0337s0050 | 72.222 | 36 | 10 | 0 | 259 | 294 | 14 | 49 | 1.66e-13 | 66.6 |
MS.gene043931.t1 | MTR_4g035820 | 23.129 | 294 | 185 | 8 | 17 | 299 | 61 | 324 | 4.14e-13 | 73.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043931.t1 | AT4G38180 | 28.842 | 423 | 278 | 6 | 32 | 452 | 70 | 471 | 7.96e-53 | 195 |
MS.gene043931.t1 | AT3G06250 | 26.794 | 418 | 237 | 9 | 34 | 448 | 189 | 540 | 1.37e-38 | 153 |
MS.gene043931.t1 | AT3G06250 | 26.794 | 418 | 237 | 9 | 34 | 448 | 189 | 540 | 1.37e-38 | 153 |
MS.gene043931.t1 | AT3G06250 | 26.794 | 418 | 237 | 9 | 34 | 448 | 189 | 540 | 1.37e-38 | 153 |
MS.gene043931.t1 | AT5G28530 | 25.421 | 594 | 303 | 22 | 40 | 531 | 60 | 615 | 1.60e-38 | 152 |
MS.gene043931.t1 | AT5G28530 | 25.421 | 594 | 303 | 22 | 40 | 531 | 60 | 615 | 1.60e-38 | 152 |
MS.gene043931.t1 | AT2G27110 | 25.532 | 423 | 259 | 9 | 34 | 452 | 48 | 418 | 7.60e-35 | 142 |
MS.gene043931.t1 | AT2G27110 | 32.031 | 128 | 76 | 4 | 463 | 590 | 518 | 634 | 1.10e-11 | 68.6 |
MS.gene043931.t1 | AT2G27110 | 25.532 | 423 | 259 | 9 | 34 | 452 | 48 | 418 | 7.60e-35 | 142 |
MS.gene043931.t1 | AT2G27110 | 32.031 | 128 | 76 | 4 | 463 | 590 | 518 | 634 | 1.10e-11 | 68.6 |
MS.gene043931.t1 | AT5G18960 | 25.581 | 430 | 250 | 11 | 24 | 448 | 200 | 564 | 3.09e-34 | 140 |
MS.gene043931.t1 | AT5G18960 | 25.581 | 430 | 250 | 11 | 24 | 448 | 200 | 564 | 3.09e-34 | 140 |
MS.gene043931.t1 | AT4G15090 | 25.708 | 424 | 288 | 8 | 32 | 452 | 48 | 447 | 5.28e-34 | 139 |
MS.gene043931.t1 | AT4G15090 | 31.875 | 160 | 91 | 4 | 454 | 612 | 536 | 678 | 3.42e-16 | 83.2 |
MS.gene043931.t1 | AT4G15090 | 25.708 | 424 | 288 | 8 | 32 | 452 | 48 | 447 | 5.28e-34 | 139 |
MS.gene043931.t1 | AT4G15090 | 31.875 | 160 | 91 | 4 | 454 | 612 | 536 | 678 | 3.42e-16 | 83.2 |
MS.gene043931.t1 | AT4G15090 | 25.708 | 424 | 288 | 8 | 32 | 452 | 48 | 447 | 5.28e-34 | 139 |
MS.gene043931.t1 | AT4G15090 | 31.875 | 160 | 91 | 4 | 454 | 612 | 536 | 678 | 3.42e-16 | 83.2 |
MS.gene043931.t1 | AT4G15090 | 25.708 | 424 | 288 | 8 | 32 | 452 | 48 | 447 | 5.28e-34 | 139 |
MS.gene043931.t1 | AT4G15090 | 31.875 | 160 | 91 | 4 | 454 | 612 | 536 | 678 | 3.42e-16 | 83.2 |
MS.gene043931.t1 | AT4G15090 | 25.708 | 424 | 288 | 8 | 32 | 452 | 48 | 447 | 5.28e-34 | 139 |
MS.gene043931.t1 | AT4G15090 | 31.875 | 160 | 91 | 4 | 454 | 612 | 536 | 678 | 3.42e-16 | 83.2 |
MS.gene043931.t1 | AT2G27110 | 31.405 | 242 | 160 | 2 | 213 | 452 | 36 | 273 | 5.48e-34 | 139 |
MS.gene043931.t1 | AT2G27110 | 32.031 | 128 | 76 | 4 | 463 | 590 | 373 | 489 | 9.76e-12 | 68.9 |
MS.gene043931.t1 | AT5G28530 | 26.651 | 439 | 268 | 15 | 40 | 455 | 60 | 467 | 6.17e-34 | 138 |
MS.gene043931.t1 | AT1G10240 | 27.230 | 426 | 266 | 14 | 40 | 451 | 53 | 448 | 1.14e-33 | 137 |
MS.gene043931.t1 | AT1G10240 | 27.230 | 426 | 266 | 14 | 40 | 451 | 53 | 448 | 1.14e-33 | 137 |
MS.gene043931.t1 | AT1G76320 | 26.058 | 449 | 281 | 12 | 41 | 483 | 3 | 406 | 1.43e-33 | 137 |
MS.gene043931.t1 | AT1G76320 | 25.942 | 451 | 283 | 12 | 39 | 483 | 1 | 406 | 3.81e-33 | 136 |
MS.gene043931.t1 | AT1G76320 | 25.167 | 449 | 289 | 10 | 39 | 483 | 1 | 406 | 3.88e-33 | 136 |
MS.gene043931.t1 | AT1G76320 | 25.167 | 449 | 289 | 10 | 39 | 483 | 1 | 406 | 3.88e-33 | 136 |
MS.gene043931.t1 | AT4G38170 | 30.317 | 221 | 143 | 4 | 235 | 452 | 24 | 236 | 5.20e-30 | 125 |
MS.gene043931.t1 | AT3G22170 | 23.543 | 429 | 277 | 10 | 34 | 452 | 69 | 456 | 1.17e-29 | 125 |
MS.gene043931.t1 | AT3G22170 | 23.543 | 429 | 277 | 10 | 34 | 452 | 69 | 456 | 1.17e-29 | 125 |
MS.gene043931.t1 | AT2G32250 | 25.386 | 453 | 260 | 14 | 1 | 448 | 8 | 387 | 1.65e-29 | 125 |
MS.gene043931.t1 | AT2G32250 | 25.386 | 453 | 260 | 14 | 1 | 448 | 8 | 387 | 2.31e-29 | 125 |
MS.gene043931.t1 | AT2G32250 | 25.386 | 453 | 260 | 14 | 1 | 448 | 8 | 387 | 2.31e-29 | 125 |
MS.gene043931.t1 | AT2G32250 | 25.221 | 452 | 262 | 13 | 1 | 448 | 8 | 387 | 2.75e-29 | 124 |
MS.gene043931.t1 | AT2G32250 | 25.221 | 452 | 262 | 13 | 1 | 448 | 8 | 387 | 2.75e-29 | 124 |
MS.gene043931.t1 | AT2G32250 | 25.221 | 452 | 262 | 13 | 1 | 448 | 8 | 387 | 2.75e-29 | 124 |
MS.gene043931.t1 | AT1G80010 | 26.540 | 422 | 272 | 14 | 41 | 453 | 101 | 493 | 9.44e-29 | 122 |
MS.gene043931.t1 | AT2G32250 | 25.243 | 412 | 236 | 10 | 41 | 448 | 3 | 346 | 1.07e-28 | 122 |
MS.gene043931.t1 | AT2G32250 | 25.243 | 412 | 236 | 10 | 41 | 448 | 3 | 346 | 1.13e-28 | 122 |
MS.gene043931.t1 | AT1G52520 | 24.413 | 426 | 281 | 11 | 41 | 464 | 91 | 477 | 3.83e-23 | 105 |
MS.gene043931.t1 | AT4G19990 | 24.113 | 423 | 256 | 10 | 41 | 452 | 27 | 395 | 7.26e-22 | 101 |
MS.gene043931.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 462 | 592 | 495 | 615 | 1.34e-12 | 71.6 |
MS.gene043931.t1 | AT4G19990 | 24.113 | 423 | 256 | 10 | 41 | 452 | 27 | 395 | 7.26e-22 | 101 |
MS.gene043931.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 462 | 592 | 495 | 615 | 1.34e-12 | 71.6 |
MS.gene043931.t1 | AT4G19990 | 24.113 | 423 | 256 | 10 | 41 | 452 | 41 | 409 | 7.88e-22 | 101 |
MS.gene043931.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 462 | 592 | 509 | 629 | 1.46e-12 | 71.6 |
MS.gene043931.t1 | AT4G19990 | 24.113 | 423 | 256 | 10 | 41 | 452 | 27 | 395 | 9.01e-22 | 100 |
MS.gene043931.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 462 | 592 | 495 | 615 | 1.38e-12 | 71.6 |
MS.gene043931.t1 | AT4G19990 | 24.113 | 423 | 256 | 10 | 41 | 452 | 27 | 395 | 9.65e-22 | 100 |
MS.gene043931.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 462 | 592 | 495 | 615 | 1.35e-12 | 71.6 |
MS.gene043931.t1 | AT4G19990 | 24.113 | 423 | 256 | 10 | 41 | 452 | 27 | 395 | 9.65e-22 | 100 |
MS.gene043931.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 462 | 592 | 495 | 615 | 1.35e-12 | 71.6 |
MS.gene043931.t1 | AT4G19990 | 28.692 | 237 | 162 | 4 | 219 | 452 | 106 | 338 | 1.09e-21 | 100 |
MS.gene043931.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 462 | 592 | 438 | 558 | 1.25e-12 | 71.6 |
Find 96 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 5.3:-50503592 | None:intergenic |
TACATTTCAGCTGCCTTTCT+TGG | 0.197151 | 5.3:+50502176 | MS.gene043931:intron |
CAACAAGATTATGCTCTATT+TGG | 0.198611 | 5.3:+50501663 | MS.gene043931:CDS |
CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 5.3:+50502209 | MS.gene043931:CDS |
TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 5.3:-50502303 | None:intergenic |
TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 5.3:-50503586 | None:intergenic |
TTTCGATGAGTTAACTAATC+TGG | 0.303419 | 5.3:+50502457 | MS.gene043931:CDS |
ACCAGCTTGGTCTGTGTATA+TGG | 0.305801 | 5.3:-50502321 | None:intergenic |
AATCAGATTTCGACTACAAT+TGG | 0.318540 | 5.3:+50502498 | MS.gene043931:CDS |
TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 5.3:+50503438 | MS.gene043931:CDS |
GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 5.3:-50501713 | None:intergenic |
TTTGCTTCTTCCGAGCTATA+AGG | 0.345757 | 5.3:-50503654 | None:intergenic |
CAATTCACAAAATAAGAAAT+TGG | 0.356642 | 5.3:+50501068 | MS.gene043931:CDS |
GTCTTTAGTGCCAACATTCA+TGG | 0.367086 | 5.3:-50503314 | None:intergenic |
CTGTCTGTGAACCATTTGTT+GGG | 0.380118 | 5.3:+50503539 | MS.gene043931:CDS |
CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 5.3:+50503430 | MS.gene043931:CDS |
AACAATAAATATCGGCCATT+AGG | 0.388497 | 5.3:+50501720 | MS.gene043931:CDS |
ACCGAACAAACAATAAATAT+CGG | 0.389395 | 5.3:+50501712 | MS.gene043931:CDS |
AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 5.3:+50503578 | MS.gene043931:CDS |
TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 5.3:-50503568 | None:intergenic |
ATAACTCTGGATTCTCTGTT+AGG | 0.399201 | 5.3:+50501025 | MS.gene043931:CDS |
GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 5.3:+50503463 | MS.gene043931:CDS |
CCATGATTCTTTATCACTAA+AGG | 0.406174 | 5.3:-50500944 | None:intergenic |
TAAAGAATCATGGAAGTCTT+TGG | 0.408500 | 5.3:+50500954 | MS.gene043931:CDS |
CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 5.3:+50503146 | MS.gene043931:CDS |
GATTATGATCTTCAAACCTT+GGG | 0.413114 | 5.3:-50503069 | None:intergenic |
TTTAATTATGCATATAACTC+TGG | 0.423871 | 5.3:+50501012 | MS.gene043931:CDS |
CGATTATGATCTTCAAACCT+TGG | 0.425681 | 5.3:-50503070 | None:intergenic |
CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 5.3:+50501360 | MS.gene043931:CDS |
AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 5.3:+50501242 | MS.gene043931:CDS |
GGGTTGTCACAGTCGACATT+AGG | 0.433188 | 5.3:+50503104 | MS.gene043931:CDS |
TGAATGTCTATAAGATATAT+AGG | 0.445219 | 5.3:+50501274 | MS.gene043931:CDS |
TGGTCTGTGTATATGGTTTG+AGG | 0.446650 | 5.3:-50502314 | None:intergenic |
GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 5.3:+50501225 | MS.gene043931:CDS |
CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 5.3:-50503247 | None:intergenic |
CGTTATGCTTGTAACAAAGA+AGG | 0.449439 | 5.3:+50501108 | MS.gene043931:CDS |
GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 5.3:+50501390 | MS.gene043931:CDS |
GCTGTCTGTGAACCATTTGT+TGG | 0.450764 | 5.3:+50503538 | MS.gene043931:CDS |
TATGCATTGGTCTTCAGCTT+GGG | 0.450920 | 5.3:+50502598 | MS.gene043931:CDS |
ATCTGAGAGTGGAAAATTGA+TGG | 0.458266 | 5.3:+50500879 | MS.gene043931:CDS |
CTCAAGTAGCGCAAATGCTC+TGG | 0.460440 | 5.3:-50501330 | None:intergenic |
TCTTTAGAAATGAAGCTCTC+TGG | 0.460450 | 5.3:+50501562 | MS.gene043931:CDS |
ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 5.3:+50503147 | MS.gene043931:CDS |
GGCCTACTTCAGACTTTAAG+TGG | 0.462107 | 5.3:+50502552 | MS.gene043931:CDS |
ACAAAATAAGAAATTGGATA+AGG | 0.469178 | 5.3:+50501074 | MS.gene043931:CDS |
GTATGCATTGGTCTTCAGCT+TGG | 0.479582 | 5.3:+50502597 | MS.gene043931:CDS |
GAAGTGATGGGTCAAGGAGT+TGG | 0.484292 | 5.3:+50501435 | MS.gene043931:CDS |
TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 5.3:-50501219 | None:intergenic |
TTTGGTGCAGTCCCAACAAA+TGG | 0.485464 | 5.3:-50503550 | None:intergenic |
TCTAATGACAACTCGTCAAA+AGG | 0.488137 | 5.3:+50501503 | MS.gene043931:CDS |
ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 5.3:-50502189 | None:intergenic |
ATCAGATTTCGACTACAATT+GGG | 0.491708 | 5.3:+50502499 | MS.gene043931:CDS |
CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 5.3:+50501516 | MS.gene043931:CDS |
GAGAACATCTTATGAAGTGA+TGG | 0.499875 | 5.3:+50501422 | MS.gene043931:CDS |
ATTGGTCTTCAGCTTGGGTG+AGG | 0.501327 | 5.3:+50502603 | MS.gene043931:CDS |
TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 5.3:-50501608 | None:intergenic |
ATCATAATCGACTTGATGAA+AGG | 0.507955 | 5.3:+50503083 | MS.gene043931:CDS |
TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 5.3:-50501474 | None:intergenic |
GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 5.3:-50503063 | None:intergenic |
TGGTCTTTGCTCATGGCACG+TGG | 0.519068 | 5.3:+50502388 | MS.gene043931:CDS |
TGTCTATAAGATATATAGGT+GGG | 0.523740 | 5.3:+50501278 | MS.gene043931:CDS |
TCATAATCGACTTGATGAAA+GGG | 0.526860 | 5.3:+50503084 | MS.gene043931:CDS |
GACAGAAATTCCTTATAGCT+CGG | 0.533906 | 5.3:+50503644 | MS.gene043931:CDS |
CTGAAATCTACCATGAATGT+TGG | 0.534154 | 5.3:+50503304 | MS.gene043931:CDS |
TAACAAAGAAGGTTTCAAGA+AGG | 0.538422 | 5.3:+50501119 | MS.gene043931:CDS |
CTCGTTCAAATCGTATGCAT+TGG | 0.543047 | 5.3:+50502585 | MS.gene043931:CDS |
CCTTTAGTGATAAAGAATCA+TGG | 0.543522 | 5.3:+50500944 | MS.gene043931:CDS |
AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 5.3:+50501120 | MS.gene043931:CDS |
AATGAAGCTCTCTGGAAACC+AGG | 0.548203 | 5.3:+50501570 | MS.gene043931:CDS |
AAATGCTCTGGTTTATGTAA+TGG | 0.552634 | 5.3:-50501318 | None:intergenic |
ACTTCAACAACGCACCAGCT+TGG | 0.558588 | 5.3:-50502334 | None:intergenic |
TGAAAATTCAGTTATTGATG+CGG | 0.565546 | 5.3:+50500903 | MS.gene043931:CDS |
GTGATGGGTCAAGGAGTTGG+AGG | 0.568802 | 5.3:+50501438 | MS.gene043931:CDS |
TACACGTGTTTGCGCAGATG+CGG | 0.571672 | 5.3:+50503390 | MS.gene043931:CDS |
TTGAAGAAAACCTTTCCCCA+AGG | 0.580876 | 5.3:+50503053 | MS.gene043931:CDS |
GAAGCAAAAGAAAGATGATG+AGG | 0.585686 | 5.3:+50503669 | MS.gene043931:CDS |
TCTTATGAAGTGATGGGTCA+AGG | 0.589029 | 5.3:+50501429 | MS.gene043931:CDS |
TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 5.3:+50503431 | MS.gene043931:CDS |
ACCATATACACAGACCAAGC+TGG | 0.590176 | 5.3:+50502320 | MS.gene043931:CDS |
ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 5.3:+50503426 | MS.gene043931:CDS |
TGAAGACTTAGAAGGCGTAA+CGG | 0.598405 | 5.3:-50503506 | None:intergenic |
GACAACTCGTCAAAAGGAGA+TGG | 0.599038 | 5.3:+50501509 | MS.gene043931:CDS |
TTGATATCGTTGTGCTTGAG+TGG | 0.601464 | 5.3:-50503338 | None:intergenic |
AGAACATCTTATGAAGTGAT+GGG | 0.601988 | 5.3:+50501423 | MS.gene043931:CDS |
AACTCGTCAAAAGGAGATGG+TGG | 0.603142 | 5.3:+50501512 | MS.gene043931:CDS |
ACGTGTTTGCGCAGATGCGG+AGG | 0.605934 | 5.3:+50503393 | MS.gene043931:CDS |
ATATCAACTTCATCTGAGAG+TGG | 0.607949 | 5.3:+50500868 | MS.gene043931:CDS |
AGCCACTTAAAGTCTGAAGT+AGG | 0.617789 | 5.3:-50502554 | None:intergenic |
ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 5.3:-50503068 | None:intergenic |
AGAACTAGACTGTCACATGT+TGG | 0.634703 | 5.3:-50501168 | None:intergenic |
ATGTCTATAAGATATATAGG+TGG | 0.643489 | 5.3:+50501277 | MS.gene043931:CDS |
GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 5.3:-50503289 | None:intergenic |
GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 5.3:+50503415 | MS.gene043931:CDS |
CATGTCGACATAAGAAACCC+CGG | 0.663279 | 5.3:-50503165 | None:intergenic |
GGTCTTTGCTCATGGCACGT+GGG | 0.672483 | 5.3:+50502389 | MS.gene043931:CDS |
TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 5.3:+50503148 | MS.gene043931:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTAATGTTTATATTGATTGA+AGG | + | chr5.3:50501867-50501886 | MS.gene043931:intron | 15.0% |
!! | ACAAAATAAGAAATTGGATA+AGG | + | chr5.3:50501074-50501093 | MS.gene043931:CDS | 20.0% |
!! | CAATTCACAAAATAAGAAAT+TGG | + | chr5.3:50501068-50501087 | MS.gene043931:CDS | 20.0% |
!! | TGAATGTCTATAAGATATAT+AGG | + | chr5.3:50501274-50501293 | MS.gene043931:CDS | 20.0% |
!! | TTTAATTATGCATATAACTC+TGG | + | chr5.3:50501012-50501031 | MS.gene043931:CDS | 20.0% |
!!! | AATTTAATGTTCTGGTTTAT+GGG | + | chr5.3:50501895-50501914 | MS.gene043931:intron | 20.0% |
!!! | ATGATGAAAAACTGTTTTAA+TGG | + | chr5.3:50502527-50502546 | MS.gene043931:CDS | 20.0% |
! | AAAACACCTTGAAAAACATT+CGG | - | chr5.3:50502365-50502384 | None:intergenic | 25.0% |
! | ACCGAACAAACAATAAATAT+CGG | + | chr5.3:50501712-50501731 | MS.gene043931:CDS | 25.0% |
! | AGTACAAAATACTAACCTAA+TGG | - | chr5.3:50501738-50501757 | None:intergenic | 25.0% |
! | ATGTCTATAAGATATATAGG+TGG | + | chr5.3:50501277-50501296 | MS.gene043931:CDS | 25.0% |
! | ATTCTATTTACACAACACAA+TGG | + | chr5.3:50502106-50502125 | MS.gene043931:intron | 25.0% |
! | CATAATAGTATTTGAAGGAA+AGG | - | chr5.3:50502898-50502917 | None:intergenic | 25.0% |
! | CTTTAGTCATTTCAACATTA+TGG | + | chr5.3:50502724-50502743 | MS.gene043931:intron | 25.0% |
! | TGAAAATTCAGTTATTGATG+CGG | + | chr5.3:50500903-50500922 | MS.gene043931:CDS | 25.0% |
! | TGAAATTTGAATGAATGTTC+TGG | + | chr5.3:50501785-50501804 | MS.gene043931:intron | 25.0% |
! | TGTCTATAAGATATATAGGT+GGG | + | chr5.3:50501278-50501297 | MS.gene043931:CDS | 25.0% |
! | TTCCTTCAAATACTATTATG+AGG | + | chr5.3:50502898-50502917 | MS.gene043931:intron | 25.0% |
!! | AGGTTTAGAATTTAATGTTC+TGG | + | chr5.3:50501887-50501906 | MS.gene043931:intron | 25.0% |
!! | TGTTGTATTTTGTTCTGATT+TGG | + | chr5.3:50502147-50502166 | MS.gene043931:intron | 25.0% |
!!! | AAGACATAGCTAGTATTTTT+TGG | + | chr5.3:50501625-50501644 | MS.gene043931:CDS | 25.0% |
!!! | AGACATAGCTAGTATTTTTT+GGG | + | chr5.3:50501626-50501645 | MS.gene043931:CDS | 25.0% |
!!! | CTTATTTTGTGAATTGTTCT+TGG | - | chr5.3:50501064-50501083 | None:intergenic | 25.0% |
!!! | GAATTTAATGTTCTGGTTTA+TGG | + | chr5.3:50501894-50501913 | MS.gene043931:intron | 25.0% |
!!! | GCTTTAATAAATTCTAAAGC+TGG | + | chr5.3:50501390-50501409 | MS.gene043931:CDS | 25.0% |
!!! | TGAAAAACTGTTTTAATGGA+AGG | + | chr5.3:50502531-50502550 | MS.gene043931:CDS | 25.0% |
AAACACATATGATCTTTCCA+TGG | - | chr5.3:50501958-50501977 | None:intergenic | 30.0% | |
AACAAAGAAGGTTTCAAGAA+GGG | + | chr5.3:50501120-50501139 | MS.gene043931:CDS | 30.0% | |
AACAATAAATATCGGCCATT+AGG | + | chr5.3:50501720-50501739 | MS.gene043931:CDS | 30.0% | |
AAGAAAGACCAAATCCAATT+AGG | + | chr5.3:50503578-50503597 | MS.gene043931:CDS | 30.0% | |
AATCAGATTTCGACTACAAT+TGG | + | chr5.3:50502498-50502517 | MS.gene043931:CDS | 30.0% | |
AGAACATCTTATGAAGTGAT+GGG | + | chr5.3:50501423-50501442 | MS.gene043931:CDS | 30.0% | |
ATCAGATTTCGACTACAATT+GGG | + | chr5.3:50502499-50502518 | MS.gene043931:CDS | 30.0% | |
ATGATTGTCAAAACCAAGAA+AGG | - | chr5.3:50502192-50502211 | None:intergenic | 30.0% | |
ATTATGATCTTCAAACCTTG+GGG | - | chr5.3:50503071-50503090 | None:intergenic | 30.0% | |
CAACAAGATTATGCTCTATT+TGG | + | chr5.3:50501663-50501682 | MS.gene043931:CDS | 30.0% | |
CCATGATTCTTTATCACTAA+AGG | - | chr5.3:50500947-50500966 | None:intergenic | 30.0% | |
CCTTTAGTGATAAAGAATCA+TGG | + | chr5.3:50500944-50500963 | MS.gene043931:CDS | 30.0% | |
CTCCTCATAATAGTATTTGA+AGG | - | chr5.3:50502903-50502922 | None:intergenic | 30.0% | |
CTGGTATATGTGTGTTAATT+TGG | + | chr5.3:50501824-50501843 | MS.gene043931:intron | 30.0% | |
CTTCAAATACTATTATGAGG+AGG | + | chr5.3:50502901-50502920 | MS.gene043931:intron | 30.0% | |
GAGAATGCAAAGAAAAATCT+CGG | + | chr5.3:50502413-50502432 | MS.gene043931:CDS | 30.0% | |
GATTATGATCTTCAAACCTT+GGG | - | chr5.3:50503072-50503091 | None:intergenic | 30.0% | |
GCCGATATTTATTGTTTGTT+CGG | - | chr5.3:50501716-50501735 | None:intergenic | 30.0% | |
TAAAGAAAAACCAGAGGAAA+GGG | + | chr5.3:50501209-50501228 | MS.gene043931:CDS | 30.0% | |
TAAAGAATCATGGAAGTCTT+TGG | + | chr5.3:50500954-50500973 | MS.gene043931:CDS | 30.0% | |
TAAAGAATCGAACAAGTGAA+TGG | - | chr5.3:50502709-50502728 | None:intergenic | 30.0% | |
TAACAAAGAAGGTTTCAAGA+AGG | + | chr5.3:50501119-50501138 | MS.gene043931:CDS | 30.0% | |
TGGATATCATAGTAAAAACC+TGG | - | chr5.3:50501591-50501610 | None:intergenic | 30.0% | |
TTCTTTGACCTAATTGGATT+TGG | - | chr5.3:50503589-50503608 | None:intergenic | 30.0% | |
TTTAAGTCCGAAAATCGAAA+AGG | - | chr5.3:50501477-50501496 | None:intergenic | 30.0% | |
TTTCGATGAGTTAACTAATC+TGG | + | chr5.3:50502457-50502476 | MS.gene043931:CDS | 30.0% | |
! | AAATGCTCTGGTTTATGTAA+TGG | - | chr5.3:50501321-50501340 | None:intergenic | 30.0% |
! | AGCTGGAATATATTTGAAGT+TGG | + | chr5.3:50501242-50501261 | MS.gene043931:CDS | 30.0% |
! | AGTTTCGAATGTTGATGTTT+TGG | + | chr5.3:50503021-50503040 | MS.gene043931:intron | 30.0% |
! | CAAAGTTTTCACATTTGAGA+AGG | + | chr5.3:50502958-50502977 | MS.gene043931:intron | 30.0% |
! | GAATCTTCCTTTTCGATTTT+CGG | + | chr5.3:50501467-50501486 | MS.gene043931:CDS | 30.0% |
! | GCATCTGAAATATTTCTCAA+CGG | + | chr5.3:50503415-50503434 | MS.gene043931:CDS | 30.0% |
! | TATGGTTTGAGGTTTCTTAT+TGG | - | chr5.3:50502306-50502325 | None:intergenic | 30.0% |
! | TCAATTCCGAATGTTTTTCA+AGG | + | chr5.3:50502356-50502375 | MS.gene043931:CDS | 30.0% |
! | TTTGGTCTTTCTTTGAACTT+TGG | - | chr5.3:50503571-50503590 | None:intergenic | 30.0% |
!! | ACATGTTTTCAAGATTTTGG+AGG | + | chr5.3:50503183-50503202 | MS.gene043931:CDS | 30.0% |
!! | ATCATAATCGACTTGATGAA+AGG | + | chr5.3:50503083-50503102 | MS.gene043931:CDS | 30.0% |
!! | ATGTTCTGGTTTAGAATTGA+AGG | + | chr5.3:50501799-50501818 | MS.gene043931:intron | 30.0% |
!! | GAGGAGTTTCTTATTTCTAA+AGG | + | chr5.3:50503463-50503482 | MS.gene043931:CDS | 30.0% |
!! | TCATAATCGACTTGATGAAA+GGG | + | chr5.3:50503084-50503103 | MS.gene043931:CDS | 30.0% |
!! | TCGACATGTTTTCAAGATTT+TGG | + | chr5.3:50503180-50503199 | MS.gene043931:CDS | 30.0% |
!!! | CTGCACAATATGTTTTAAAG+CGG | + | chr5.3:50503248-50503267 | MS.gene043931:CDS | 30.0% |
!!! | GACATAGCTAGTATTTTTTG+GGG | + | chr5.3:50501627-50501646 | MS.gene043931:CDS | 30.0% |
!!! | GTTTTTCAAGGTGTTTTTCA+TGG | + | chr5.3:50502368-50502387 | MS.gene043931:CDS | 30.0% |
ACATTATGGTTCAGAGAATG+AGG | + | chr5.3:50502738-50502757 | MS.gene043931:intron | 35.0% | |
ATAACTCTGGATTCTCTGTT+AGG | + | chr5.3:50501025-50501044 | MS.gene043931:CDS | 35.0% | |
ATATCAACTTCATCTGAGAG+TGG | + | chr5.3:50500868-50500887 | MS.gene043931:CDS | 35.0% | |
ATCTGAGAGTGGAAAATTGA+TGG | + | chr5.3:50500879-50500898 | MS.gene043931:CDS | 35.0% | |
CATTATGGTTCAGAGAATGA+GGG | + | chr5.3:50502739-50502758 | MS.gene043931:intron | 35.0% | |
CGAGAAGTAAATGAAGTTCA+AGG | + | chr5.3:50501360-50501379 | MS.gene043931:CDS | 35.0% | |
CGATTATGATCTTCAAACCT+TGG | - | chr5.3:50503073-50503092 | None:intergenic | 35.0% | |
CGTTATGCTTGTAACAAAGA+AGG | + | chr5.3:50501108-50501127 | MS.gene043931:CDS | 35.0% | |
CTAAAGAAAAACCAGAGGAA+AGG | + | chr5.3:50501208-50501227 | MS.gene043931:CDS | 35.0% | |
CTGAAATCTACCATGAATGT+TGG | + | chr5.3:50503304-50503323 | MS.gene043931:CDS | 35.0% | |
GAAAGCTAAAGAAAAACCAG+AGG | + | chr5.3:50501203-50501222 | MS.gene043931:CDS | 35.0% | |
GAAGCAAAAGAAAGATGATG+AGG | + | chr5.3:50503669-50503688 | MS.gene043931:CDS | 35.0% | |
GACAGAAATTCCTTATAGCT+CGG | + | chr5.3:50503644-50503663 | MS.gene043931:CDS | 35.0% | |
GAGAACATCTTATGAAGTGA+TGG | + | chr5.3:50501422-50501441 | MS.gene043931:CDS | 35.0% | |
GTCTGCTTAATCCTAAAAAC+AGG | + | chr5.3:50501145-50501164 | MS.gene043931:CDS | 35.0% | |
TCTAATGACAACTCGTCAAA+AGG | + | chr5.3:50501503-50501522 | MS.gene043931:CDS | 35.0% | |
TGTACAGAGCACAAATTCTA+AGG | - | chr5.3:50501934-50501953 | None:intergenic | 35.0% | |
! | CATCGTAAGAGTGTGTTATT+TGG | + | chr5.3:50502209-50502228 | MS.gene043931:CDS | 35.0% |
! | TCTTTAGAAATGAAGCTCTC+TGG | + | chr5.3:50501562-50501581 | MS.gene043931:CDS | 35.0% |
! | TCTTTCAATGCTTTTCTTCG+TGG | + | chr5.3:50502668-50502687 | MS.gene043931:intron | 35.0% |
! | TGGTTTAGAATTGAAGGTTC+TGG | + | chr5.3:50501805-50501824 | MS.gene043931:intron | 35.0% |
! | TTTTTCATGGTCTTTGCTCA+TGG | + | chr5.3:50502381-50502400 | MS.gene043931:CDS | 35.0% |
!! | ACTGCTTTTGAAGACTTAGA+AGG | - | chr5.3:50503517-50503536 | None:intergenic | 35.0% |
!! | CACAAATTCTAAGGCAAGAT+AGG | - | chr5.3:50501925-50501944 | None:intergenic | 35.0% |
!! | CGCTTTAAAACATATTGTGC+AGG | - | chr5.3:50503250-50503269 | None:intergenic | 35.0% |
!! | TTCAAGATTTTGGAGGTCTT+AGG | + | chr5.3:50503190-50503209 | MS.gene043931:CDS | 35.0% |
!!! | AGACATCAGCTACTTTTGAT+TGG | + | chr5.3:50502252-50502271 | MS.gene043931:CDS | 35.0% |
!!! | CACAATATGTTTTAAAGCGG+TGG | + | chr5.3:50503251-50503270 | MS.gene043931:CDS | 35.0% |
AATCGAACAAGTGAATGGTC+TGG | - | chr5.3:50502704-50502723 | None:intergenic | 40.0% | |
ACCAATGATCTTTGCATAGC+TGG | - | chr5.3:50502056-50502075 | None:intergenic | 40.0% | |
AGAACTAGACTGTCACATGT+TGG | - | chr5.3:50501171-50501190 | None:intergenic | 40.0% | |
AGTCGCTTCTTTGACCTAAT+TGG | - | chr5.3:50503595-50503614 | None:intergenic | 40.0% | |
ATGAGGAGGACACAACAAAA+GGG | + | chr5.3:50502915-50502934 | MS.gene043931:intron | 40.0% | |
ATGTCGTATGTTTGAGAACC+GGG | + | chr5.3:50503147-50503166 | MS.gene043931:CDS | 40.0% | |
ATTTCTCAACGGTGTTCTTG+AGG | + | chr5.3:50503426-50503445 | MS.gene043931:CDS | 40.0% | |
CATGTCGTATGTTTGAGAAC+CGG | + | chr5.3:50503146-50503165 | MS.gene043931:CDS | 40.0% | |
CTCGTTCAAATCGTATGCAT+TGG | + | chr5.3:50502585-50502604 | MS.gene043931:CDS | 40.0% | |
CTGTCTGTGAACCATTTGTT+GGG | + | chr5.3:50503539-50503558 | MS.gene043931:CDS | 40.0% | |
GAGGGATAATCATGCAGATT+TGG | + | chr5.3:50502757-50502776 | MS.gene043931:intron | 40.0% | |
GATTTCAGCTTATCGACAGA+CGG | - | chr5.3:50503292-50503311 | None:intergenic | 40.0% | |
GTCTTTAGTGCCAACATTCA+TGG | - | chr5.3:50503317-50503336 | None:intergenic | 40.0% | |
TACATTTCAGCTGCCTTTCT+TGG | + | chr5.3:50502176-50502195 | MS.gene043931:intron | 40.0% | |
TATGAGGAGGACACAACAAA+AGG | + | chr5.3:50502914-50502933 | MS.gene043931:intron | 40.0% | |
TCATGCAGATTTGGACTTCA+AGG | + | chr5.3:50502766-50502785 | MS.gene043931:intron | 40.0% | |
TCCAGCTATGCAAAGATCAT+TGG | + | chr5.3:50502052-50502071 | MS.gene043931:intron | 40.0% | |
TGGTCTGTGTATATGGTTTG+AGG | - | chr5.3:50502317-50502336 | None:intergenic | 40.0% | |
TTGAAGAAAACCTTTCCCCA+AGG | + | chr5.3:50503053-50503072 | MS.gene043931:CDS | 40.0% | |
TTGATATCGTTGTGCTTGAG+TGG | - | chr5.3:50503341-50503360 | None:intergenic | 40.0% | |
TTTGCTTCTTCCGAGCTATA+AGG | - | chr5.3:50503657-50503676 | None:intergenic | 40.0% | |
! | AGCCACTTAAAGTCTGAAGT+AGG | - | chr5.3:50502557-50502576 | None:intergenic | 40.0% |
! | TGAAGACTTAGAAGGCGTAA+CGG | - | chr5.3:50503509-50503528 | None:intergenic | 40.0% |
!! | AAGATTTTGGAGGTCTTAGG+TGG | + | chr5.3:50503193-50503212 | MS.gene043931:CDS | 40.0% |
!! | TATGCATTGGTCTTCAGCTT+GGG | + | chr5.3:50502598-50502617 | MS.gene043931:CDS | 40.0% |
!! | TCACATGTTGGCCTGTTTTT+AGG | - | chr5.3:50501159-50501178 | None:intergenic | 40.0% |
!! | TCTTATGAAGTGATGGGTCA+AGG | + | chr5.3:50501429-50501448 | MS.gene043931:CDS | 40.0% |
!!! | GCTAGTATTTTTTGGGGAGA+TGG | + | chr5.3:50501633-50501652 | MS.gene043931:CDS | 40.0% |
AACTCGTCAAAAGGAGATGG+TGG | + | chr5.3:50501512-50501531 | MS.gene043931:CDS | 45.0% | |
ACCAGCTTGGTCTGTGTATA+TGG | - | chr5.3:50502324-50502343 | None:intergenic | 45.0% | |
ACCATATACACAGACCAAGC+TGG | + | chr5.3:50502320-50502339 | MS.gene043931:CDS | 45.0% | |
ATCCCAACAGTCAGCTTATG+CGG | + | chr5.3:50502816-50502835 | MS.gene043931:intron | 45.0% | |
ATTTGTGCTCTGTACAGCCA+TGG | + | chr5.3:50501938-50501957 | MS.gene043931:intron | 45.0% | |
CATGTCGACATAAGAAACCC+CGG | - | chr5.3:50503168-50503187 | None:intergenic | 45.0% | |
GAAAAACCAGAGGAAAGGGT+TGG | + | chr5.3:50501213-50501232 | MS.gene043931:CDS | 45.0% | |
GACAACTCGTCAAAAGGAGA+TGG | + | chr5.3:50501509-50501528 | MS.gene043931:CDS | 45.0% | |
GATCTTCAAACCTTGGGGAA+AGG | - | chr5.3:50503066-50503085 | None:intergenic | 45.0% | |
GCTGTCTGTGAACCATTTGT+TGG | + | chr5.3:50503538-50503557 | MS.gene043931:CDS | 45.0% | |
GGCCTACTTCAGACTTTAAG+TGG | + | chr5.3:50502552-50502571 | MS.gene043931:CDS | 45.0% | |
TGTCGTATGTTTGAGAACCG+GGG | + | chr5.3:50503148-50503167 | MS.gene043931:CDS | 45.0% | |
TGTCTTCTGCAGCATCAACT+TGG | - | chr5.3:50501611-50501630 | None:intergenic | 45.0% | |
TGTTCTTGAGGCAGGGAAAA+AGG | + | chr5.3:50503438-50503457 | MS.gene043931:CDS | 45.0% | |
TTACAACCAACCCTTTCCTC+TGG | - | chr5.3:50501222-50501241 | None:intergenic | 45.0% | |
! | AATGAAGCTCTCTGGAAACC+AGG | + | chr5.3:50501570-50501589 | MS.gene043931:CDS | 45.0% |
! | GTGAGGTCACATTTTACAGC+TGG | + | chr5.3:50502620-50502639 | MS.gene043931:CDS | 45.0% |
! | TTTGGTGCAGTCCCAACAAA+TGG | - | chr5.3:50503553-50503572 | None:intergenic | 45.0% |
!! | GAAAGGGTTGGTTGTAAAGC+TGG | + | chr5.3:50501225-50501244 | MS.gene043931:CDS | 45.0% |
!! | GTATGCATTGGTCTTCAGCT+TGG | + | chr5.3:50502597-50502616 | MS.gene043931:CDS | 45.0% |
ACTTCAACAACGCACCAGCT+TGG | - | chr5.3:50502337-50502356 | None:intergenic | 50.0% | |
AGACCGCATAAGCTGACTGT+TGG | - | chr5.3:50502822-50502841 | None:intergenic | 50.0% | |
CTCAAGTAGCGCAAATGCTC+TGG | - | chr5.3:50501333-50501352 | None:intergenic | 50.0% | |
GACCGCATAAGCTGACTGTT+GGG | - | chr5.3:50502821-50502840 | None:intergenic | 50.0% | |
GGGTTGTCACAGTCGACATT+AGG | + | chr5.3:50503104-50503123 | MS.gene043931:CDS | 50.0% | |
TACACGTGTTTGCGCAGATG+CGG | + | chr5.3:50503390-50503409 | MS.gene043931:CDS | 50.0% | |
TCAACGGTGTTCTTGAGGCA+GGG | + | chr5.3:50503431-50503450 | MS.gene043931:CDS | 50.0% | |
!! | ATTGGTCTTCAGCTTGGGTG+AGG | + | chr5.3:50502603-50502622 | MS.gene043931:CDS | 50.0% |
!! | GAAGTGATGGGTCAAGGAGT+TGG | + | chr5.3:50501435-50501454 | MS.gene043931:CDS | 50.0% |
CTCAACGGTGTTCTTGAGGC+AGG | + | chr5.3:50503430-50503449 | MS.gene043931:CDS | 55.0% | |
GGTCTTTGCTCATGGCACGT+GGG | + | chr5.3:50502389-50502408 | MS.gene043931:CDS | 55.0% | |
TGAGGCAGGGAAAAAGGCAG+AGG | + | chr5.3:50503444-50503463 | MS.gene043931:CDS | 55.0% | |
TGGTCTTTGCTCATGGCACG+TGG | + | chr5.3:50502388-50502407 | MS.gene043931:CDS | 55.0% | |
! | CGTCAAAAGGAGATGGTGGC+TGG | + | chr5.3:50501516-50501535 | MS.gene043931:CDS | 55.0% |
!! | GTGATGGGTCAAGGAGTTGG+AGG | + | chr5.3:50501438-50501457 | MS.gene043931:CDS | 55.0% |
ACGTGTTTGCGCAGATGCGG+AGG | + | chr5.3:50503393-50503412 | MS.gene043931:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 50500859 | 50503705 | 50500859 | ID=MS.gene043931 |
chr5.3 | mRNA | 50500859 | 50503705 | 50500859 | ID=MS.gene043931.t1;Parent=MS.gene043931 |
chr5.3 | exon | 50500859 | 50501741 | 50500859 | ID=MS.gene043931.t1.exon1;Parent=MS.gene043931.t1 |
chr5.3 | CDS | 50500859 | 50501741 | 50500859 | ID=cds.MS.gene043931.t1;Parent=MS.gene043931.t1 |
chr5.3 | exon | 50502186 | 50502662 | 50502186 | ID=MS.gene043931.t1.exon2;Parent=MS.gene043931.t1 |
chr5.3 | CDS | 50502186 | 50502662 | 50502186 | ID=cds.MS.gene043931.t1;Parent=MS.gene043931.t1 |
chr5.3 | exon | 50503050 | 50503705 | 50503050 | ID=MS.gene043931.t1.exon3;Parent=MS.gene043931.t1 |
chr5.3 | CDS | 50503050 | 50503705 | 50503050 | ID=cds.MS.gene043931.t1;Parent=MS.gene043931.t1 |
Gene Sequence |
Protein sequence |