AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene043991

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene043991.t1 MTR_1g021230 91.518 448 26 6 20 459 1 444 0.0 775
MS.gene043991.t1 MTR_3g011610 36.693 387 210 9 47 411 15 388 2.85e-60 205
MS.gene043991.t1 MTR_8g042410 70.161 124 37 0 73 196 37 160 7.27e-56 194
MS.gene043991.t1 MTR_3g052450 69.492 118 36 0 70 187 37 154 9.82e-55 191
MS.gene043991.t1 MTR_3g052430 70.085 117 35 0 71 187 39 155 1.15e-54 191
MS.gene043991.t1 MTR_2g088170 57.419 155 60 1 39 193 1 149 1.95e-50 178
MS.gene043991.t1 MTR_1g083630 48.045 179 82 3 73 240 12 190 3.01e-46 169
MS.gene043991.t1 MTR_7g076740 62.069 116 42 2 72 186 11 125 2.91e-44 157
MS.gene043991.t1 MTR_5g007370 64.486 107 38 0 70 176 9 115 4.40e-44 157
MS.gene043991.t1 MTR_4g478180 63.551 107 39 0 70 176 10 116 5.67e-44 158
MS.gene043991.t1 MTR_7g115650 59.048 105 43 0 72 176 11 115 1.50e-43 152
MS.gene043991.t1 MTR_7g096930 62.857 105 39 0 72 176 11 115 6.38e-43 153
MS.gene043991.t1 MTR_1g076150 60.952 105 41 0 72 176 11 115 6.65e-43 152
MS.gene043991.t1 MTR_5g029840 61.682 107 41 0 70 176 9 115 8.92e-43 154
MS.gene043991.t1 MTR_3g074520 60.748 107 42 0 70 176 9 115 9.60e-43 154
MS.gene043991.t1 MTR_8g031360 63.208 106 38 1 72 176 12 117 1.27e-42 152
MS.gene043991.t1 MTR_2g011660 61.905 105 40 0 72 176 12 116 1.32e-42 154
MS.gene043991.t1 MTR_7g035075 53.906 128 46 1 48 175 2 116 2.34e-41 146
MS.gene043991.t1 MTR_1g043080 60.000 105 42 0 72 176 11 115 3.02e-41 147
MS.gene043991.t1 MTR_4g091490 60.000 105 42 0 72 176 12 116 3.27e-41 150
MS.gene043991.t1 MTR_6g006030 62.136 103 39 0 73 175 14 116 5.38e-41 145
MS.gene043991.t1 MTR_1g110460 52.632 114 54 0 65 178 18 131 6.46e-41 148
MS.gene043991.t1 MTR_5g088640 42.286 175 87 3 74 247 13 174 1.37e-40 146
MS.gene043991.t1 MTR_1g085640 62.264 106 40 0 73 178 12 117 1.41e-40 149
MS.gene043991.t1 MTR_5g088080 44.000 175 84 4 74 247 13 174 1.45e-40 146
MS.gene043991.t1 MTR_5g088150 44.000 175 84 4 74 247 13 174 1.45e-40 146
MS.gene043991.t1 MTR_5g488210 44.000 175 84 4 74 247 13 174 1.45e-40 146
MS.gene043991.t1 MTR_1g045610 60.000 105 42 0 74 178 22 126 1.60e-40 146
MS.gene043991.t1 MTR_1g100653 59.091 110 45 0 72 181 11 120 1.80e-40 147
MS.gene043991.t1 MTR_7g117730 59.048 105 43 0 72 176 11 115 1.95e-40 145
MS.gene043991.t1 MTR_7g110830 62.264 106 40 0 73 178 12 117 2.47e-40 148
MS.gene043991.t1 MTR_8g027345 59.633 109 44 0 72 180 11 119 2.59e-40 146
MS.gene043991.t1 MTR_2g089620 58.879 107 44 0 70 176 9 115 2.93e-40 147
MS.gene043991.t1 MTR_5g062790 44.000 175 84 4 74 247 10 171 3.54e-40 146
MS.gene043991.t1 MTR_5g488170 44.000 175 84 4 74 247 13 174 3.71e-40 144
MS.gene043991.t1 MTR_1g073170 55.462 119 53 0 60 178 7 125 4.99e-40 144
MS.gene043991.t1 MTR_0008s0470 53.333 120 56 0 72 191 12 131 5.09e-40 145
MS.gene043991.t1 MTR_1g043050 59.048 105 43 0 72 176 11 115 6.23e-40 144
MS.gene043991.t1 MTR_1g085040 61.321 106 41 0 73 178 12 117 6.54e-40 147
MS.gene043991.t1 MTR_1g086530 57.547 106 45 0 73 178 33 138 7.51e-40 145
MS.gene043991.t1 MTR_0008s0390 50.000 130 63 1 70 197 10 139 1.05e-39 144
MS.gene043991.t1 MTR_0251s0050 47.727 132 69 0 70 201 10 141 1.57e-39 144
MS.gene043991.t1 MTR_4g065017 55.752 113 50 0 64 176 8 120 2.07e-39 145
MS.gene043991.t1 MTR_4g105130 60.577 104 41 0 73 176 12 115 4.07e-39 145
MS.gene043991.t1 MTR_3g077110 59.615 104 42 0 73 176 12 115 4.69e-39 144
MS.gene043991.t1 MTR_2g089450 57.547 106 45 0 70 175 9 114 6.02e-39 141
MS.gene043991.t1 MTR_2g099740 58.654 104 43 0 73 176 12 115 7.38e-39 145
MS.gene043991.t1 MTR_4g082290 57.143 105 45 0 72 176 11 115 7.61e-39 145
MS.gene043991.t1 MTR_3g083540 56.190 105 46 0 72 176 40 144 8.03e-39 142
MS.gene043991.t1 MTR_1g086510 55.963 109 48 0 70 178 18 126 1.32e-38 141
MS.gene043991.t1 MTR_7g011170 56.190 105 46 0 72 176 11 115 1.38e-38 142
MS.gene043991.t1 MTR_1g112760 57.692 104 44 0 73 176 13 116 2.23e-38 139
MS.gene043991.t1 MTR_4g121460 57.143 105 45 0 72 176 11 115 2.62e-38 142
MS.gene043991.t1 MTR_2g067420 61.616 99 38 0 73 171 14 112 3.00e-38 142
MS.gene043991.t1 MTR_7g087130 59.048 105 43 0 72 176 11 115 3.55e-38 142
MS.gene043991.t1 MTR_8g006470 54.386 114 51 1 66 178 3 116 4.07e-38 140
MS.gene043991.t1 MTR_0008s0280 53.153 111 52 0 70 180 9 119 6.93e-38 138
MS.gene043991.t1 MTR_3g028740 58.654 104 43 0 73 176 22 125 7.24e-38 141
MS.gene043991.t1 MTR_7g010210 57.143 105 45 0 72 176 11 115 7.49e-38 140
MS.gene043991.t1 MTR_2g097910 57.692 104 44 0 73 176 20 123 8.90e-38 140
MS.gene043991.t1 MTR_4g082230 56.731 104 45 0 73 176 12 115 1.12e-37 142
MS.gene043991.t1 MTR_7g111290 62.245 98 37 0 73 170 12 109 1.15e-37 141
MS.gene043991.t1 MTR_7g010210 57.143 105 45 0 72 176 11 115 1.31e-37 138
MS.gene043991.t1 MTR_8g017540 56.731 104 45 0 73 176 58 161 1.84e-37 141
MS.gene043991.t1 MTR_8g017440 56.731 104 45 0 73 176 12 115 2.18e-37 140
MS.gene043991.t1 MTR_8g095390 59.804 102 41 0 75 176 14 115 2.31e-37 139
MS.gene043991.t1 MTR_8g017500 55.769 104 46 0 73 176 12 115 2.66e-37 140
MS.gene043991.t1 MTR_0140s0030 56.190 105 46 0 72 176 12 116 3.22e-37 139
MS.gene043991.t1 MTR_0489s0020 56.190 105 46 0 72 176 12 116 3.22e-37 139
MS.gene043991.t1 MTR_2g064160 55.769 104 46 0 73 176 11 114 4.08e-37 138
MS.gene043991.t1 MTR_3g065440 56.190 105 46 0 72 176 11 115 4.24e-37 138
MS.gene043991.t1 MTR_4g102380 56.190 105 46 0 72 176 11 115 4.58e-37 137
MS.gene043991.t1 MTR_5g078140 56.190 105 46 0 72 176 11 115 4.73e-37 138
MS.gene043991.t1 MTR_6g012180 59.000 100 41 0 72 171 11 110 6.82e-37 138
MS.gene043991.t1 MTR_2g089420 54.054 111 51 0 71 181 9 119 7.36e-37 140
MS.gene043991.t1 MTR_8g098860 55.660 106 47 0 73 178 12 117 9.78e-37 137
MS.gene043991.t1 MTR_6g012690 55.238 105 47 0 72 176 11 115 9.90e-37 138
MS.gene043991.t1 MTR_3g039990 56.190 105 46 0 72 176 12 116 1.24e-36 137
MS.gene043991.t1 MTR_4g029540 54.310 116 51 2 71 185 8 122 1.53e-36 136
MS.gene043991.t1 MTR_4g073420 56.863 102 44 0 75 176 14 115 1.92e-36 135
MS.gene043991.t1 MTR_4g125520 55.238 105 47 0 72 176 11 115 2.93e-36 136
MS.gene043991.t1 MTR_3g097450 58.824 102 42 0 75 176 14 115 2.95e-36 135
MS.gene043991.t1 MTR_4g063100 54.369 103 47 0 74 176 8 110 3.91e-36 134
MS.gene043991.t1 MTR_5g042030 57.143 105 45 0 72 176 6 110 7.46e-36 134
MS.gene043991.t1 MTR_2g034790 54.286 105 48 0 72 176 11 115 7.80e-36 135
MS.gene043991.t1 MTR_5g010020 57.576 99 42 0 73 171 12 110 1.32e-35 135
MS.gene043991.t1 MTR_1g062940 54.717 106 48 0 71 176 4 109 1.99e-35 131
MS.gene043991.t1 MTR_5g088610 49.593 123 61 1 74 195 10 132 3.63e-35 134
MS.gene043991.t1 MTR_5g079670 51.923 104 50 0 73 176 11 114 6.29e-35 129
MS.gene043991.t1 MTR_8g017340 56.190 105 45 1 73 176 12 116 7.81e-35 135
MS.gene043991.t1 MTR_6g009430 46.043 139 74 1 73 210 12 150 9.71e-35 132
MS.gene043991.t1 MTR_2g096380 51.887 106 51 0 73 178 6 111 1.12e-34 129
MS.gene043991.t1 MTR_0063s0090 45.000 140 72 2 70 209 9 143 1.70e-34 129
MS.gene043991.t1 MTR_8g017390 54.286 105 47 1 73 176 12 116 2.55e-34 134
MS.gene043991.t1 MTR_1g085880 51.316 152 65 5 73 220 11 157 6.73e-34 126
MS.gene043991.t1 MTR_8g017350 55.238 105 46 1 73 176 12 116 1.42e-33 134
MS.gene043991.t1 MTR_2g033170 54.128 109 50 0 70 178 21 129 2.49e-33 128
MS.gene043991.t1 MTR_5g079120 52.381 105 50 0 72 176 60 164 2.68e-33 128
MS.gene043991.t1 MTR_1g085770 51.974 152 64 5 73 220 11 157 3.60e-33 127
MS.gene043991.t1 MTR_4g485530 51.961 102 49 0 75 176 14 115 5.06e-33 124
MS.gene043991.t1 MTR_4g100720 52.885 104 48 1 73 175 13 116 6.55e-33 123
MS.gene043991.t1 MTR_1g100667 54.369 103 47 0 74 176 14 116 6.80e-33 125
MS.gene043991.t1 MTR_8g020490 51.923 104 50 0 73 176 8 111 1.11e-32 125
MS.gene043991.t1 MTR_1g017000 49.524 105 52 1 73 176 12 116 1.84e-32 124
MS.gene043991.t1 MTR_1g017140 50.926 108 52 1 70 176 9 116 2.17e-32 126
MS.gene043991.t1 MTR_3g461490 51.923 104 50 0 73 176 12 115 2.18e-32 125
MS.gene043991.t1 MTR_6g090405 51.852 108 51 1 73 179 12 119 3.01e-32 124
MS.gene043991.t1 MTR_3g103570 39.130 161 91 2 73 232 12 166 5.16e-32 125
MS.gene043991.t1 MTR_4g057635 51.852 108 51 1 73 179 12 119 6.27e-32 124
MS.gene043991.t1 MTR_6g055910 51.456 103 50 0 74 176 15 117 1.46e-31 122
MS.gene043991.t1 MTR_4g123040 53.774 106 49 0 73 178 24 129 1.53e-31 123
MS.gene043991.t1 MTR_7g109320 58.095 105 44 0 72 176 11 115 2.21e-31 124
MS.gene043991.t1 MTR_8g060940 51.485 101 49 0 71 171 5 105 2.34e-31 120
MS.gene043991.t1 MTR_5g078910 50.000 104 52 0 73 176 7 110 2.89e-31 122
MS.gene043991.t1 MTR_5g014990 50.000 108 53 1 70 176 9 116 3.09e-31 122
MS.gene043991.t1 MTR_2g095520 52.427 103 48 1 70 171 9 111 3.98e-31 122
MS.gene043991.t1 MTR_5g078860 51.429 105 51 0 72 176 6 110 1.11e-30 120
MS.gene043991.t1 MTR_4g097570 51.961 102 48 1 70 170 9 110 1.14e-30 120
MS.gene043991.t1 MTR_5g079290 47.619 105 55 0 72 176 16 120 2.32e-30 119
MS.gene043991.t1 MTR_4g128190 40.000 170 78 6 72 233 10 163 2.39e-30 118
MS.gene043991.t1 MTR_4g097570 51.456 103 48 2 70 170 9 111 3.31e-30 119
MS.gene043991.t1 MTR_7g102110 47.222 108 56 1 70 176 9 116 5.14e-30 118
MS.gene043991.t1 MTR_5g079220 48.571 105 54 0 72 176 20 124 5.23e-30 118
MS.gene043991.t1 MTR_7g017260 47.664 107 54 1 72 176 24 130 5.95e-30 118
MS.gene043991.t1 MTR_5g078800 49.524 105 53 0 72 176 6 110 1.43e-29 116
MS.gene043991.t1 MTR_0197s0010 48.000 100 52 0 77 176 5 104 2.14e-29 115
MS.gene043991.t1 MTR_4g128670 50.485 103 50 1 70 171 9 111 2.60e-29 118
MS.gene043991.t1 MTR_5g078950 47.000 100 53 0 72 171 6 105 6.02e-28 112
MS.gene043991.t1 MTR_0247s0040 45.631 103 56 0 72 174 6 108 7.29e-28 109
MS.gene043991.t1 MTR_0001s0360 45.714 105 57 0 72 176 6 110 1.55e-27 110
MS.gene043991.t1 MTR_5g016510 51.961 102 48 1 75 176 5 105 1.66e-27 112
MS.gene043991.t1 MTR_7g111290 69.697 66 20 0 105 170 2 67 2.02e-27 112
MS.gene043991.t1 MTR_5g078930 46.602 103 55 0 74 176 10 112 2.27e-27 109
MS.gene043991.t1 MTR_7g037260 40.845 142 70 3 44 180 122 254 3.85e-27 112
MS.gene043991.t1 MTR_4g063100 60.274 73 29 0 104 176 9 81 3.86e-27 108
MS.gene043991.t1 MTR_0193s0090 45.192 104 57 0 72 175 6 109 8.25e-27 107
MS.gene043991.t1 MTR_4g094982 50.000 102 50 1 75 176 5 105 1.24e-26 108
MS.gene043991.t1 MTR_4g019370 50.962 104 48 2 75 177 38 139 1.39e-26 110
MS.gene043991.t1 MTR_7g451170 41.353 133 69 2 44 176 168 291 3.55e-26 110
MS.gene043991.t1 MTR_5g007300 55.556 81 36 0 69 149 60 140 5.08e-26 103
MS.gene043991.t1 MTR_5g070020 47.619 105 52 2 73 176 120 222 9.67e-26 108
MS.gene043991.t1 MTR_7g061330 51.923 104 49 1 73 176 111 213 1.01e-25 110
MS.gene043991.t1 MTR_7g461410 51.923 104 49 1 73 176 111 213 1.01e-25 110
MS.gene043991.t1 MTR_7g061330 51.923 104 49 1 73 176 75 177 1.39e-25 109
MS.gene043991.t1 MTR_6g055910 59.155 71 29 0 106 176 18 88 2.72e-25 104
MS.gene043991.t1 MTR_6g015455 50.980 102 49 1 75 176 5 105 4.00e-25 109
MS.gene043991.t1 MTR_3g463400 48.571 105 51 2 73 176 131 233 4.22e-25 107
MS.gene043991.t1 MTR_2g096380 56.000 75 33 0 104 178 18 92 4.69e-25 102
MS.gene043991.t1 MTR_4g088015 45.133 113 56 2 73 180 219 330 5.47e-25 107
MS.gene043991.t1 MTR_3g110028 49.038 104 52 1 73 176 83 185 5.55e-25 108
MS.gene043991.t1 MTR_1g026870 48.077 104 53 1 73 176 83 185 5.67e-25 108
MS.gene043991.t1 MTR_4g105660 47.619 105 52 2 73 176 178 280 8.86e-25 106
MS.gene043991.t1 MTR_5g049190 44.545 110 57 3 75 182 19 126 1.62e-24 102
MS.gene043991.t1 MTR_7g037130 46.018 113 55 3 73 180 143 254 1.83e-24 104
MS.gene043991.t1 MTR_3g101290 46.078 102 54 1 75 176 37 137 2.39e-24 101
MS.gene043991.t1 MTR_7g035350 42.975 121 68 1 75 195 225 344 3.01e-24 105
MS.gene043991.t1 MTR_1g057980 42.969 128 70 2 46 171 49 175 5.21e-24 102
MS.gene043991.t1 MTR_3g077650 44.248 113 57 2 75 182 181 292 6.55e-24 103
MS.gene043991.t1 MTR_5g082910 52.381 105 48 2 68 171 11 114 4.66e-23 99.0
MS.gene043991.t1 MTR_7g450950 47.423 97 50 1 75 171 157 252 1.15e-22 99.0
MS.gene043991.t1 MTR_3g045430 44.231 104 58 0 73 176 13 116 1.29e-22 98.2
MS.gene043991.t1 MTR_4g082040 39.161 143 81 3 46 184 73 213 1.39e-22 100
MS.gene043991.t1 MTR_5g041570 47.619 105 52 2 75 178 134 236 1.40e-22 100
MS.gene043991.t1 MTR_6g074860 42.857 112 63 1 75 186 4 114 1.97e-22 96.3
MS.gene043991.t1 MTR_3g089045 43.307 127 64 3 75 195 16 140 1.04e-21 95.5
MS.gene043991.t1 MTR_5g010650 46.939 98 51 1 73 170 108 204 3.25e-20 93.2
MS.gene043991.t1 MTR_7g086960 43.636 110 61 1 75 184 89 197 9.68e-20 90.9
MS.gene043991.t1 MTR_7g061550 42.718 103 57 1 78 178 10 112 4.16e-19 89.0
MS.gene043991.t1 MTR_6g027370 35.606 132 81 2 47 178 74 201 1.08e-18 87.4
MS.gene043991.t1 MTR_6g027360 38.261 115 68 2 65 178 68 180 1.67e-18 86.3
MS.gene043991.t1 MTR_6g027340 38.462 104 63 1 75 178 16 118 1.82e-18 84.0
MS.gene043991.t1 MTR_0023s0210 44.872 78 43 0 72 149 6 83 3.92e-17 76.6
MS.gene043991.t1 MTR_5g038910 36.634 101 63 1 78 178 29 128 1.17e-16 82.4
MS.gene043991.t1 MTR_5g038910 36.634 101 63 1 78 178 29 128 1.60e-16 81.6
MS.gene043991.t1 MTR_8g468380 34.615 104 67 1 78 181 25 127 2.82e-15 78.2
MS.gene043991.t1 MTR_4g063100 58.696 46 19 0 131 176 1 46 5.43e-13 67.8
MS.gene043991.t1 MTR_2g096380 54.167 48 22 0 131 178 1 48 2.67e-12 65.5
MS.gene043991.t1 MTR_6g055910 54.348 46 21 0 131 176 2 47 1.13e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene043991.t1 AT4G26930 71.318 129 37 0 61 189 7 135 1.11e-60 203
MS.gene043991.t1 AT3G11440 41.391 302 143 8 68 336 36 336 4.99e-60 204
MS.gene043991.t1 AT5G06100 40.491 326 163 8 39 336 1 323 1.39e-59 202
MS.gene043991.t1 AT3G11440 41.391 302 143 8 68 336 36 336 4.20e-59 203
MS.gene043991.t1 AT3G11440 41.391 302 143 8 68 336 36 336 4.20e-59 203
MS.gene043991.t1 AT3G11440 41.391 302 143 8 68 336 36 336 4.20e-59 203
MS.gene043991.t1 AT5G06100 40.491 326 163 8 39 336 1 323 6.68e-59 202
MS.gene043991.t1 AT5G06100 40.491 326 163 8 39 336 1 323 6.68e-59 202
MS.gene043991.t1 AT5G06100 40.491 326 163 8 39 336 1 323 6.68e-59 202
MS.gene043991.t1 AT5G06100 40.491 326 163 8 39 336 1 323 6.68e-59 202
MS.gene043991.t1 AT2G32460 65.672 134 45 1 61 193 5 138 5.07e-58 199
MS.gene043991.t1 AT2G32460 68.033 122 39 0 72 193 5 126 1.03e-56 195
MS.gene043991.t1 AT5G55020 71.074 121 33 1 70 188 21 141 2.29e-55 192
MS.gene043991.t1 AT2G26960 53.125 160 69 1 73 226 20 179 1.80e-53 185
MS.gene043991.t1 AT3G61250 63.810 105 38 0 72 176 11 115 1.49e-44 158
MS.gene043991.t1 AT4G21440 61.682 107 41 0 70 176 9 115 2.31e-43 156
MS.gene043991.t1 AT5G16770 60.748 107 42 0 70 176 9 115 1.01e-42 154
MS.gene043991.t1 AT5G16770 60.748 107 42 0 70 176 9 115 1.01e-42 154
MS.gene043991.t1 AT5G10280 60.748 107 42 0 70 176 9 115 1.11e-42 154
MS.gene043991.t1 AT5G16770 60.748 107 42 0 70 176 9 115 2.02e-42 153
MS.gene043991.t1 AT5G16770 60.748 107 42 0 70 176 9 115 2.02e-42 153
MS.gene043991.t1 AT3G01530 49.645 141 64 2 70 207 22 158 3.96e-42 149
MS.gene043991.t1 AT3G02940 59.813 107 43 0 70 176 9 115 4.62e-42 151
MS.gene043991.t1 AT2G31180 58.182 110 46 0 72 181 11 120 6.66e-42 149
MS.gene043991.t1 AT3G02940 59.813 107 43 0 70 176 9 115 9.51e-42 151
MS.gene043991.t1 AT3G02940 59.813 107 43 0 70 176 9 115 9.51e-42 151
MS.gene043991.t1 AT5G40350 61.165 103 40 0 73 175 17 119 1.28e-41 147
MS.gene043991.t1 AT3G27810 59.813 107 43 0 69 175 16 122 1.28e-41 148
MS.gene043991.t1 AT1G68320 57.547 106 45 0 73 178 19 124 7.46e-41 147
MS.gene043991.t1 AT3G24310 60.000 110 44 0 70 179 15 124 1.20e-40 147
MS.gene043991.t1 AT4G05100 58.879 107 44 0 70 176 10 116 1.35e-40 148
MS.gene043991.t1 AT1G79180 56.780 118 46 1 73 185 14 131 1.90e-40 147
MS.gene043991.t1 AT1G09540 60.577 104 41 0 73 176 12 115 2.41e-40 148
MS.gene043991.t1 AT5G65230 57.009 107 46 0 70 176 9 115 2.95e-40 147
MS.gene043991.t1 AT4G28110 57.944 107 45 0 70 176 9 115 3.00e-40 146
MS.gene043991.t1 AT3G13540 58.095 105 44 0 72 176 22 126 4.23e-40 144
MS.gene043991.t1 AT3G23250 47.887 142 74 0 72 213 11 152 5.09e-40 145
MS.gene043991.t1 AT3G30210 57.798 109 46 0 72 180 26 134 7.17e-40 145
MS.gene043991.t1 AT4G13480 60.952 105 41 0 74 178 7 111 9.95e-40 144
MS.gene043991.t1 AT1G06180 59.048 105 43 0 72 176 11 115 2.21e-39 142
MS.gene043991.t1 AT4G01680 61.321 106 41 0 73 178 12 117 2.23e-39 142
MS.gene043991.t1 AT5G54230 58.654 104 43 0 73 176 12 115 2.59e-39 144
MS.gene043991.t1 AT5G60890 58.879 107 44 0 70 176 9 115 3.81e-39 143
MS.gene043991.t1 AT4G01680 61.321 106 41 0 73 178 12 117 4.01e-39 144
MS.gene043991.t1 AT1G34670 57.009 107 46 0 70 176 9 115 4.23e-39 145
MS.gene043991.t1 AT1G57560 59.615 104 42 0 73 176 12 115 4.88e-39 144
MS.gene043991.t1 AT3G13890 58.654 104 43 0 73 176 12 115 5.33e-39 144
MS.gene043991.t1 AT1G57560 59.615 104 42 0 73 176 12 115 5.42e-39 142
MS.gene043991.t1 AT5G26660 50.758 132 58 1 73 197 12 143 6.31e-39 144
MS.gene043991.t1 AT1G08810 60.000 105 42 0 72 176 11 115 7.25e-39 142
MS.gene043991.t1 AT1G18570 59.813 107 43 0 70 176 10 116 1.11e-38 144
MS.gene043991.t1 AT3G01140 57.009 107 46 0 70 176 9 115 1.18e-38 143
MS.gene043991.t1 AT3G01140 57.009 107 46 0 70 176 52 158 2.77e-38 143
MS.gene043991.t1 AT5G15310 57.143 105 45 0 72 176 11 115 2.79e-38 142
MS.gene043991.t1 AT5G15310 57.143 105 45 0 72 176 11 115 3.21e-38 141
MS.gene043991.t1 AT5G15310 57.143 105 45 0 72 176 11 115 5.03e-38 139
MS.gene043991.t1 AT3G12720 56.481 108 47 0 69 176 18 125 5.53e-38 140
MS.gene043991.t1 AT1G22640 57.692 104 44 0 73 176 12 115 6.05e-38 139
MS.gene043991.t1 AT1G16490 50.400 125 62 0 73 197 14 138 8.66e-38 139
MS.gene043991.t1 AT4G38620 59.804 102 41 0 75 176 14 115 9.82e-38 139
MS.gene043991.t1 AT1G56160 56.731 104 45 0 73 176 14 117 1.02e-37 139
MS.gene043991.t1 AT5G12870 58.654 104 43 0 73 176 18 121 1.09e-37 139
MS.gene043991.t1 AT1G66230 56.075 107 47 0 72 178 11 117 1.24e-37 139
MS.gene043991.t1 AT1G25340 52.679 112 51 1 67 178 14 123 1.29e-37 139
MS.gene043991.t1 AT4G17785 57.143 105 45 0 72 176 12 116 1.42e-37 140
MS.gene043991.t1 AT4G17785 57.143 105 45 0 72 176 12 116 1.61e-37 140
MS.gene043991.t1 AT2G47460 49.231 130 64 1 72 199 11 140 2.12e-37 140
MS.gene043991.t1 AT3G28910 56.075 107 47 0 70 176 9 115 2.59e-37 139
MS.gene043991.t1 AT5G07700 56.190 105 46 0 72 176 11 115 3.12e-37 139
MS.gene043991.t1 AT5G07700 56.190 105 46 0 72 176 11 115 3.12e-37 139
MS.gene043991.t1 AT2G16720 57.692 104 44 0 73 176 12 115 3.37e-37 137
MS.gene043991.t1 AT5G62470 57.143 105 45 0 72 176 11 115 3.60e-37 139
MS.gene043991.t1 AT2G47190 47.727 132 61 1 47 178 2 125 3.61e-37 137
MS.gene043991.t1 AT5G61420 56.190 105 46 0 72 176 11 115 4.32e-37 139
MS.gene043991.t1 AT3G47600 57.143 105 45 0 72 176 11 115 4.96e-37 139
MS.gene043991.t1 AT5G14750 50.000 114 57 0 63 176 6 119 5.38e-37 135
MS.gene043991.t1 AT3G08500 53.571 112 52 0 65 176 22 133 6.53e-37 139
MS.gene043991.t1 AT5G07690 56.731 104 45 0 72 175 11 114 7.04e-37 138
MS.gene043991.t1 AT1G74650 57.692 104 44 0 73 176 12 115 1.10e-36 137
MS.gene043991.t1 AT1G48000 53.774 106 49 0 73 178 32 137 1.12e-36 135
MS.gene043991.t1 AT1G35515 55.769 104 46 0 73 176 12 115 1.26e-36 134
MS.gene043991.t1 AT4G09460 57.843 102 43 0 75 176 14 115 1.32e-36 135
MS.gene043991.t1 AT5G16600 55.140 107 48 0 72 178 11 117 1.39e-36 137
MS.gene043991.t1 AT5G49330 57.143 105 45 0 72 176 11 115 1.63e-36 137
MS.gene043991.t1 AT4G22680 55.238 105 47 0 72 176 11 115 1.82e-36 135
MS.gene043991.t1 AT3G46130 51.282 117 56 1 70 185 6 122 1.92e-36 135
MS.gene043991.t1 AT1G63910 55.660 106 47 0 73 178 12 117 3.21e-36 137
MS.gene043991.t1 AT3G60460 52.212 113 53 1 67 178 5 117 3.45e-36 135
MS.gene043991.t1 AT1G74080 58.654 104 43 0 72 175 11 114 3.66e-36 136
MS.gene043991.t1 AT3G13890 53.982 113 43 1 73 176 12 124 5.19e-36 137
MS.gene043991.t1 AT5G40330 51.818 110 53 0 67 176 6 115 5.60e-36 132
MS.gene043991.t1 AT5G59780 54.286 105 48 0 74 178 9 113 5.68e-36 133
MS.gene043991.t1 AT4G01680 55.085 118 41 1 73 178 12 129 7.07e-36 136
MS.gene043991.t1 AT5G62470 57.143 105 44 1 72 176 11 114 1.19e-35 135
MS.gene043991.t1 AT3G62610 55.238 105 47 0 72 176 11 115 1.27e-35 135
MS.gene043991.t1 AT4G34990 56.863 102 44 0 75 176 14 115 1.39e-35 133
MS.gene043991.t1 AT4G12350 54.808 104 47 0 73 176 12 115 5.19e-35 132
MS.gene043991.t1 AT1G74430 54.286 105 48 0 72 176 11 115 5.36e-35 131
MS.gene043991.t1 AT1G18710 48.855 131 65 2 72 200 11 141 5.49e-35 131
MS.gene043991.t1 AT4G37780 53.774 106 48 1 72 176 11 116 5.90e-35 132
MS.gene043991.t1 AT5G52600 45.902 122 66 0 67 188 6 127 6.27e-35 129
MS.gene043991.t1 AT2G26950 48.760 121 62 0 73 193 16 136 6.35e-35 134
MS.gene043991.t1 AT3G06490 56.881 109 47 0 70 178 16 124 7.59e-35 132
MS.gene043991.t1 AT3G27920 53.398 103 48 0 74 176 15 117 7.60e-35 130
MS.gene043991.t1 AT5G14340 55.140 107 48 0 72 178 23 129 8.97e-35 131
MS.gene043991.t1 AT3G12820 57.692 104 44 0 73 176 14 117 9.81e-35 130
MS.gene043991.t1 AT1G79180 44.371 151 46 2 73 185 14 164 5.73e-34 130
MS.gene043991.t1 AT5G35550 52.885 104 49 0 73 176 14 117 1.52e-33 127
MS.gene043991.t1 AT5G62320 51.754 114 48 1 70 176 10 123 1.97e-33 126
MS.gene043991.t1 AT5G49620 54.128 109 50 0 70 178 23 131 2.27e-33 128
MS.gene043991.t1 AT1G25340 50.000 112 49 2 67 178 14 118 2.81e-33 127
MS.gene043991.t1 AT3G48920 53.922 102 47 0 74 175 19 120 3.23e-33 126
MS.gene043991.t1 AT5G57620 51.852 108 51 1 70 176 9 116 5.57e-33 127
MS.gene043991.t1 AT1G25340 50.000 112 49 2 67 178 14 118 5.72e-33 127
MS.gene043991.t1 AT3G28470 52.941 102 48 0 70 171 9 110 2.49e-32 125
MS.gene043991.t1 AT5G56110 50.962 104 51 0 73 176 12 115 4.39e-32 125
MS.gene043991.t1 AT3G53200 52.336 107 51 0 73 179 9 115 7.27e-32 122
MS.gene043991.t1 AT3G49690 50.926 108 52 1 70 176 9 116 8.85e-32 124
MS.gene043991.t1 AT5G23000 52.381 105 49 1 73 176 12 116 1.29e-31 124
MS.gene043991.t1 AT1G66370 49.524 105 53 0 72 176 7 111 5.68e-31 120
MS.gene043991.t1 AT4G25560 51.456 103 50 0 74 176 11 113 8.79e-31 120
MS.gene043991.t1 AT5G65790 50.000 108 53 1 70 176 9 116 1.76e-30 122
MS.gene043991.t1 AT5G49620 47.967 123 50 1 70 178 23 145 6.48e-30 119
MS.gene043991.t1 AT2G36890 48.673 113 57 1 70 181 9 121 2.03e-29 117
MS.gene043991.t1 AT5G52260 44.882 127 70 0 63 189 2 128 2.25e-29 116
MS.gene043991.t1 AT5G26660 67.123 73 24 0 106 178 14 86 3.53e-29 117
MS.gene043991.t1 AT2G36890 48.673 113 57 1 70 181 50 162 3.58e-29 117
MS.gene043991.t1 AT1G56650 48.182 110 57 0 67 176 2 111 8.65e-29 114
MS.gene043991.t1 AT3G27810 68.571 70 22 0 106 175 4 73 9.59e-29 112
MS.gene043991.t1 AT5G40350 67.143 70 23 0 106 175 5 74 2.38e-28 110
MS.gene043991.t1 AT4G18770 45.455 121 60 2 67 182 209 328 1.02e-27 115
MS.gene043991.t1 AT1G66380 47.273 110 58 0 67 176 2 111 1.16e-27 107
MS.gene043991.t1 AT1G66390 47.273 110 58 0 67 176 2 111 1.71e-27 110
MS.gene043991.t1 AT3G09370 51.923 104 49 1 73 176 133 235 1.26e-26 112
MS.gene043991.t1 AT3G09370 51.923 104 49 1 73 176 128 230 1.27e-26 112
MS.gene043991.t1 AT5G02320 49.565 115 52 2 73 182 125 238 1.43e-26 112
MS.gene043991.t1 AT5G02320 49.565 115 52 2 73 182 125 238 1.43e-26 112
MS.gene043991.t1 AT5G02320 49.565 115 52 2 73 182 65 178 1.56e-26 112
MS.gene043991.t1 AT3G09370 51.923 104 49 1 73 176 141 243 1.70e-26 112
MS.gene043991.t1 AT5G58850 49.524 105 50 2 73 176 103 205 1.98e-26 111
MS.gene043991.t1 AT3G46130 54.118 85 38 1 102 185 6 90 4.36e-26 106
MS.gene043991.t1 AT3G50060 44.954 109 59 1 75 183 6 113 1.15e-25 106
MS.gene043991.t1 AT5G59780 54.762 84 36 1 95 178 11 92 1.87e-25 103
MS.gene043991.t1 AT3G46130 52.174 92 41 2 95 185 11 100 1.94e-25 104
MS.gene043991.t1 AT5G40360 37.423 163 86 3 73 220 156 317 2.06e-25 107
MS.gene043991.t1 AT5G11050 48.544 103 50 2 75 176 105 205 2.81e-25 107
MS.gene043991.t1 AT2G23290 50.000 102 50 1 75 176 13 113 5.41e-25 105
MS.gene043991.t1 AT3G12820 66.176 68 23 0 109 176 2 69 7.23e-25 101
MS.gene043991.t1 AT5G11510 47.115 104 54 1 73 176 79 181 7.23e-25 108
MS.gene043991.t1 AT5G11510 36.458 96 59 2 75 169 29 123 6.86e-11 65.1
MS.gene043991.t1 AT5G11510 47.115 104 54 1 73 176 79 181 7.23e-25 108
MS.gene043991.t1 AT5G11510 36.458 96 59 2 75 169 29 123 6.86e-11 65.1
MS.gene043991.t1 AT5G11510 47.115 104 54 1 73 176 79 181 7.23e-25 108
MS.gene043991.t1 AT5G11510 36.458 96 59 2 75 169 29 123 6.86e-11 65.1
MS.gene043991.t1 AT4G37260 49.020 102 51 1 75 176 13 113 8.02e-25 104
MS.gene043991.t1 AT5G11510 47.115 104 54 1 73 176 79 181 9.77e-25 108
MS.gene043991.t1 AT5G11510 36.082 97 60 2 75 170 29 124 7.41e-11 65.1
MS.gene043991.t1 AT5G11510 47.115 104 54 1 73 176 79 181 1.07e-24 107
MS.gene043991.t1 AT5G11510 36.082 97 60 2 75 170 29 124 8.04e-11 64.7
MS.gene043991.t1 AT3G55730 49.515 103 49 2 75 176 56 156 1.35e-24 105
MS.gene043991.t1 AT1G69560 41.304 138 74 3 46 178 90 225 1.38e-24 104
MS.gene043991.t1 AT1G69560 42.424 132 69 3 52 178 80 209 1.63e-24 104
MS.gene043991.t1 AT5G35550 60.563 71 28 0 106 176 50 120 1.69e-24 102
MS.gene043991.t1 AT3G09230 48.039 102 52 1 75 176 55 155 2.68e-24 104
MS.gene043991.t1 AT4G32730 47.115 104 54 1 73 176 85 187 3.54e-24 106
MS.gene043991.t1 AT4G32730 47.115 104 54 1 73 176 85 187 3.54e-24 106
MS.gene043991.t1 AT4G32730 47.115 104 54 1 73 176 85 187 3.54e-24 106
MS.gene043991.t1 AT4G32730 47.115 104 54 1 73 176 85 187 3.54e-24 106
MS.gene043991.t1 AT4G32730 47.115 104 54 1 73 176 85 187 3.77e-24 106
MS.gene043991.t1 AT1G17950 43.478 115 62 2 75 188 5 117 5.13e-24 100
MS.gene043991.t1 AT3G27785 44.860 107 58 1 70 176 184 289 1.19e-23 103
MS.gene043991.t1 AT5G67300 48.039 102 52 1 75 176 6 106 1.90e-23 100
MS.gene043991.t1 AT2G39880 41.600 125 70 2 53 176 28 150 2.28e-23 101
MS.gene043991.t1 AT1G26780 46.018 113 58 2 73 184 96 206 4.07e-23 99.4
MS.gene043991.t1 AT3G53200 58.108 74 31 0 106 179 9 82 4.70e-23 97.1
MS.gene043991.t1 AT1G26780 46.018 113 58 2 73 184 96 206 5.42e-23 100
MS.gene043991.t1 AT4G33450 43.519 108 60 1 74 181 18 124 5.94e-23 97.8
MS.gene043991.t1 AT5G14750 50.633 79 34 1 103 176 7 85 1.05e-22 95.1
MS.gene043991.t1 AT3G29020 40.870 115 67 1 75 189 65 178 2.75e-22 95.5
MS.gene043991.t1 AT3G29020 40.870 115 67 1 75 189 67 180 3.52e-22 97.1
MS.gene043991.t1 AT5G17800 41.353 133 66 3 75 196 93 224 4.14e-22 97.1
MS.gene043991.t1 AT3G47600 56.338 71 31 0 106 176 39 109 4.30e-22 97.1
MS.gene043991.t1 AT4G00540 38.824 170 82 5 73 226 101 264 2.17e-21 96.3
MS.gene043991.t1 AT4G00540 38.824 170 82 5 73 226 99 262 3.73e-21 95.9
MS.gene043991.t1 AT1G73410 46.667 105 53 2 75 178 6 108 5.10e-21 92.4
MS.gene043991.t1 AT1G73410 46.667 105 53 2 75 178 6 108 1.61e-20 89.7
MS.gene043991.t1 AT2G25230 42.735 117 58 5 73 183 24 137 8.42e-19 85.9
MS.gene043991.t1 AT2G37630 36.765 136 80 2 78 207 7 142 9.35e-18 85.1
MS.gene043991.t1 AT3G23250 42.553 94 54 0 120 213 2 95 1.24e-17 82.4
MS.gene043991.t1 AT1G66380 47.887 71 37 0 106 176 8 78 1.74e-17 78.2
MS.gene043991.t1 AT1G66380 49.275 69 35 0 67 135 2 70 4.17e-17 77.4
MS.gene043991.t1 AT1G22640 59.649 57 23 0 120 176 2 58 5.13e-17 79.7
MS.gene043991.t1 AT1G18960 40.000 105 54 3 75 176 10 108 1.94e-16 80.5
MS.gene043991.t1 AT2G02820 31.200 125 83 2 78 202 33 154 3.03e-16 80.1
MS.gene043991.t1 AT2G02820 31.200 125 83 2 78 202 33 154 3.12e-16 81.3
MS.gene043991.t1 AT2G02820 31.200 125 83 2 78 202 33 154 3.23e-16 81.3
MS.gene043991.t1 AT1G14350 34.653 101 65 1 78 178 28 127 5.08e-16 80.5
MS.gene043991.t1 AT1G14350 34.653 101 65 1 78 178 28 127 5.08e-16 80.5
MS.gene043991.t1 AT5G40430 38.835 103 61 2 73 175 52 152 2.34e-15 76.3
MS.gene043991.t1 AT5G14750 46.552 58 31 0 119 176 1 58 6.55e-14 69.3
MS.gene043991.t1 AT5G14750 46.552 58 31 0 119 176 1 58 6.55e-14 69.3
MS.gene043991.t1 AT5G39700 38.542 96 58 1 76 171 57 151 9.15e-14 70.1
MS.gene043991.t1 AT5G59780 56.250 48 21 0 131 178 1 48 3.27e-13 68.2
MS.gene043991.t1 AT3G46130 51.786 56 26 1 131 185 1 56 3.33e-13 68.6
MS.gene043991.t1 AT1G71030 41.538 65 38 0 112 176 5 69 2.68e-12 65.9
MS.gene043991.t1 AT4G25560 56.522 46 20 0 131 176 2 47 3.32e-12 66.2
MS.gene043991.t1 AT1G71030 41.538 65 38 0 112 176 19 83 3.35e-12 65.9
MS.gene043991.t1 AT1G14350 40.323 62 37 0 117 178 23 84 5.85e-11 64.7
MS.gene043991.t1 AT1G14350 40.323 62 37 0 117 178 23 84 5.85e-11 64.7

Find 111 sgRNAs with CRISPR-Local

Find 233 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATAAGATTGGAAATAAA+TGG 0.185312 1.3:-3543472 MS.gene043991:CDS
TGACTCCTTTCTAGAGAAAT+TGG 0.220809 1.3:+3541093 None:intergenic
AAACATGGTGGTAAAATATC+TGG 0.240030 1.3:+3541474 None:intergenic
AGTCTTCATGAACCCATATA+TGG 0.244427 1.3:+3541200 None:intergenic
TGAAACGGATTGTAGCTATT+TGG 0.258205 1.3:+3541273 None:intergenic
ATGATTCGACGTTCTTCTTC+AGG 0.268447 1.3:+3543503 None:intergenic
ATCATGCTGGCTGGCTTCAT+TGG 0.300523 1.3:+3541548 None:intergenic
CTCTCAGAAGAAAAGTAATC+TGG 0.306960 1.3:+3540632 None:intergenic
ATAATGAGATAAAGAACTTT+TGG 0.307361 1.3:-3541671 MS.gene043991:CDS
CATTCAGATGATAAATCTTC+AGG 0.312305 1.3:+3541603 None:intergenic
ACAGGCTCAACTGGAGGATA+TGG 0.338931 1.3:+3541126 None:intergenic
ACTGACTGAACAGGCTCAAC+TGG 0.349423 1.3:+3541117 None:intergenic
ATTGAGTTGCATCATAAGAT+TGG 0.356703 1.3:-3543482 MS.gene043991:CDS
CGATCATCATCGCCGCTTGA+AGG 0.358046 1.3:+3543776 None:intergenic
GATGATGGCGATCACAAAAT+AGG 0.362163 1.3:-3543821 MS.gene043991:CDS
TGTGCTAAGATTTGCTTCAT+TGG 0.364024 1.3:+3541059 None:intergenic
CTCTGCTTCATCATGCTGGC+TGG 0.372309 1.3:+3541539 None:intergenic
GGCTCAAAAGAAGAGGCTTT+TGG 0.376956 1.3:+3541222 None:intergenic
TAATCTTTAAATATCACTTC+AGG 0.379136 1.3:+3541507 None:intergenic
TCAAATACTGCTGGGGCAGC+AGG 0.385380 1.3:+3541357 None:intergenic
AGCGCTTCAAGCGAAGATTA+TGG 0.386466 1.3:-3543893 MS.gene043991:CDS
TGGAAATAAATGGGCTCAAA+TGG 0.392012 1.3:-3543462 MS.gene043991:CDS
CTTCTGAGAGAGATGATTTG+AGG 0.397737 1.3:-3540619 MS.gene043991:CDS
CGTCTCCTTCGTCTTCTCCA+TGG 0.402216 1.3:-3541308 MS.gene043991:CDS
TGTTCTCTGCTTCATCATGC+TGG 0.404526 1.3:+3541535 None:intergenic
GAACACAAGATGCAAGAAAC+GGG 0.408906 1.3:-3541649 MS.gene043991:CDS
CAGTTCCAATTTCTCTAGAA+AGG 0.428312 1.3:-3541098 MS.gene043991:CDS
GAGCAAGTCCGGTACACTTC+CGG 0.430508 1.3:+3543597 None:intergenic
GTCTCCTTCGTCTTCTCCAT+GGG 0.431298 1.3:-3541307 MS.gene043991:CDS
TCAATCACAGGCGCAGCATC+TGG 0.436455 1.3:+3540578 None:intergenic
GACTTCCAAGGGCGCTTTGA+GGG 0.437235 1.3:+3541420 None:intergenic
TCATGAATATGATAGCACTA+TGG 0.438389 1.3:-3541253 MS.gene043991:CDS
GATAAATCTTCAGGGTAGAT+TGG 0.439548 1.3:+3541612 None:intergenic
TCATCCTCTGCCGTTGTCCA+TGG 0.443860 1.3:+3543671 None:intergenic
GAAATTGGAACTGACTGAAC+AGG 0.448557 1.3:+3541108 None:intergenic
TTCTGAGAGAGATGATTTGA+GGG 0.449073 1.3:-3540618 MS.gene043991:CDS
TCATAAGATTGGAAATAAAT+GGG 0.455657 1.3:-3543471 MS.gene043991:CDS
AACTGATGATCAAATACTGC+TGG 0.456239 1.3:+3541348 None:intergenic
ATTGCACCCTTTCTGAGATC+AGG 0.458941 1.3:+3543530 None:intergenic
TTTCCCACAGCGAGCAAGTC+CGG 0.466320 1.3:+3543586 None:intergenic
GGAGATACCACTGGAGGAGA+AGG 0.467461 1.3:-3543719 MS.gene043991:CDS
TGCGTCCCTCAAAGCGCCCT+TGG 0.468573 1.3:-3541425 MS.gene043991:CDS
AACGGCAGAGGATGAAATCT+TGG 0.471469 1.3:-3543663 MS.gene043991:CDS
ATGGGCTCAAATGGCTGCAC+TGG 0.486850 1.3:-3543453 MS.gene043991:intron
ACAACTGTACAAATTCATAT+CGG 0.487230 1.3:+3541398 None:intergenic
GTCTTCATGAACCCATATAT+GGG 0.491841 1.3:+3541201 None:intergenic
GGAACACAAGATGCAAGAAA+CGG 0.492766 1.3:-3541650 MS.gene043991:CDS
ATCTCATTATCTGTGCGTCC+AGG 0.493581 1.3:+3541684 None:intergenic
GTGCTATCATATTCATGAAA+CGG 0.494601 1.3:+3541258 None:intergenic
ATTATTATTATTATAGTCAA+AGG 0.494788 1.3:+3540993 None:intergenic
AGGGAAATTGGAACTCTGTC+CGG 0.506939 1.3:-3543616 MS.gene043991:CDS
GGACTTCCAAGGGCGCTTTG+AGG 0.516823 1.3:+3541419 None:intergenic
AACTCTGTCCGGAAGTGTAC+CGG 0.521040 1.3:-3543605 MS.gene043991:CDS
CAAATACTGCTGGGGCAGCA+GGG 0.524089 1.3:+3541358 None:intergenic
TCTCAGAAGAAAAGTAATCT+GGG 0.531207 1.3:+3540633 None:intergenic
GCGGCGATGATGATCGCAAA+AGG 0.531464 1.3:-3543769 MS.gene043991:CDS
CCACTCAGCTGAAACTACTC+AGG 0.545536 1.3:-3540941 MS.gene043991:CDS
ATTCAGATGATAAATCTTCA+GGG 0.545938 1.3:+3541604 None:intergenic
CTGTGATTGATGACTTCGCT+TGG 0.546041 1.3:-3540565 MS.gene043991:CDS
GGAGAAGGTGGTCTAAAGAA+AGG 0.546935 1.3:-3543695 MS.gene043991:CDS
AACATGGTGGTAAAATATCT+GGG 0.549896 1.3:+3541475 None:intergenic
ATGAACATGTGCTCAACTGA+TGG 0.550221 1.3:-3540967 MS.gene043991:CDS
TTCTCCTCCTTCTCCTCCAG+TGG 0.555594 1.3:+3543712 None:intergenic
CTGAGACCTGATCTCAGAAA+GGG 0.555668 1.3:-3543536 MS.gene043991:CDS
GATGTTGAGTCTGTGAGTAT+TGG 0.557135 1.3:+3541163 None:intergenic
GTCTGTGAGTATTGGAGTGA+AGG 0.558104 1.3:+3541171 None:intergenic
GGAAAAGCTGTCGTCTACGA+TGG 0.558748 1.3:-3543568 MS.gene043991:CDS
TCTGAGACCTGATCTCAGAA+AGG 0.562729 1.3:-3543537 MS.gene043991:CDS
GAGTCAGATGATCAGTATGA+TGG 0.563883 1.3:-3541027 MS.gene043991:CDS
AGCGCTTCAAGCGAAGATGA+TGG 0.565732 1.3:-3543836 MS.gene043991:CDS
AGGTCCATGGACAACGGCAG+AGG 0.565835 1.3:-3543675 MS.gene043991:CDS
AATTCATATCGGACTTCCAA+GGG 0.570384 1.3:+3541409 None:intergenic
ACTGGAGGAGAAGGAGGAGA+AGG 0.570737 1.3:-3543710 MS.gene043991:CDS
GCTGATCAAGAAACTGATGA+AGG 0.572989 1.3:-3543740 MS.gene043991:CDS
GGAGGAGAAGGAGGAGAAGG+TGG 0.573619 1.3:-3543707 MS.gene043991:CDS
TCTGTGAGTATTGGAGTGAA+GGG 0.573821 1.3:+3541172 None:intergenic
TTTGGTTCAATATCCTCCCA+TGG 0.576367 1.3:+3541291 None:intergenic
GATCATCATCGCCGCTTGAA+GGG 0.583102 1.3:+3543777 None:intergenic
GATACCACTGGAGGAGAAGG+AGG 0.586651 1.3:-3543716 MS.gene043991:CDS
AAATACTGCTGGGGCAGCAG+GGG 0.588505 1.3:+3541359 None:intergenic
AAATTCATATCGGACTTCCA+AGG 0.593050 1.3:+3541408 None:intergenic
GAAAAGCTGTCGTCTACGAT+GGG 0.599406 1.3:-3543567 MS.gene043991:CDS
CAAGCGAAGTCATCAATCAC+AGG 0.599584 1.3:+3540566 None:intergenic
AGCAAATCTTAGCACACGAT+GGG 0.601808 1.3:-3541052 MS.gene043991:CDS
GTACCGGACTTGCTCGCTGT+GGG 0.602772 1.3:-3543589 MS.gene043991:CDS
ACTGATGATCAAATACTGCT+GGG 0.604111 1.3:+3541349 None:intergenic
GTGGTCTAAAGAAAGGTCCA+TGG 0.604974 1.3:-3543688 MS.gene043991:CDS
ACTGATGAAGGAGATACCAC+TGG 0.608872 1.3:-3543728 MS.gene043991:CDS
GAAGACGAAGGAGACGACAT+AGG 0.610440 1.3:+3541315 None:intergenic
TCTGAGAGAGATGATTTGAG+GGG 0.619641 1.3:-3540617 MS.gene043991:CDS
TGTACCGGACTTGCTCGCTG+TGG 0.619659 1.3:-3543590 MS.gene043991:CDS
TCCTTCGTCTTCTCCATGGG+AGG 0.622941 1.3:-3541304 MS.gene043991:CDS
ATATATGGGCTCAAAAGAAG+AGG 0.623045 1.3:+3541215 None:intergenic
TTATTATTATAGTCAAAGGA+CGG 0.623516 1.3:+3540997 None:intergenic
CTGTGAGTATTGGAGTGAAG+GGG 0.624149 1.3:+3541173 None:intergenic
TGAACATGTGCTCAACTGAT+GGG 0.624333 1.3:-3540966 MS.gene043991:CDS
GACTGAACAGGCTCAACTGG+AGG 0.625059 1.3:+3541120 None:intergenic
TGTGAGTATTGGAGTGAAGG+GGG 0.628192 1.3:+3541174 None:intergenic
CCTGAGTAGTTTCAGCTGAG+TGG 0.629309 1.3:+3540941 None:intergenic
AAGCAAATCTTAGCACACGA+TGG 0.633585 1.3:-3541053 MS.gene043991:CDS
CACTCAGCTGAAACTACTCA+GGG 0.650885 1.3:-3540940 MS.gene043991:intron
GCTAGAAGCTTATCAAAACA+TGG 0.659616 1.3:+3541459 None:intergenic
GGATCTGATTAAATGCAGCA+TGG 0.663610 1.3:+3540654 None:intergenic
AAAGAAAGGTCCATGGACAA+CGG 0.666614 1.3:-3543681 MS.gene043991:CDS
GTTATGAGTAGCCCTTCAAG+CGG 0.680364 1.3:-3543788 MS.gene043991:CDS
CTGATGATCAAATACTGCTG+GGG 0.682047 1.3:+3541350 None:intergenic
TCCTCCCATGGAGAAGACGA+AGG 0.691634 1.3:+3541303 None:intergenic
AACACAAGATGCAAGAAACG+GGG 0.712037 1.3:-3541648 MS.gene043991:CDS
AGAAGCTTATCAAAACATGG+TGG 0.733637 1.3:+3541462 None:intergenic
GATGAAGGAGATACCACTGG+AGG 0.760470 1.3:-3543725 MS.gene043991:CDS
ATGGTGGTAAAATATCTGGG+CGG 0.781920 1.3:+3541478 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATCTTATATGTATTT+GGG - chr1.3:3542494-3542513 MS.gene043991:intron 10.0%
!! ATTATTATTATTATAGTCAA+AGG + chr1.3:3543456-3543475 None:intergenic 10.0%
!! TAGATAATTAAAGATATTAA+CGG + chr1.3:3541402-3541421 None:intergenic 10.0%
!!! TAAAATATTTTTGTTCAAAA+AGG - chr1.3:3541935-3541954 MS.gene043991:intron 10.0%
!! AATGAAATCTCTTAAATAAA+AGG + chr1.3:3543726-3543745 None:intergenic 15.0%
!! AGAGATAAAATTATACAATT+AGG - chr1.3:3541835-3541854 MS.gene043991:intron 15.0%
!! CAAAATATCTTATATGTATT+TGG - chr1.3:3542493-3542512 MS.gene043991:intron 15.0%
!! GAAACAAAAAAATAAGTTAA+GGG - chr1.3:3542379-3542398 MS.gene043991:intron 15.0%
!! TAATCAATTTGTAATTATGA+TGG + chr1.3:3541214-3541233 None:intergenic 15.0%
!! TAATTGTTTATATATAAGAC+CGG + chr1.3:3543549-3543568 None:intergenic 15.0%
!! TAGATTTGCAAATATAAAAA+AGG + chr1.3:3541053-3541072 None:intergenic 15.0%
!! TATACATTAGTAAAAAACTA+TGG - chr1.3:3541506-3541525 MS.gene043991:CDS 15.0%
!! TGAAAAAATGTTTATTTACT+AGG + chr1.3:3542536-3542555 None:intergenic 15.0%
!! TGATAGTTCATAATTATAAA+CGG + chr1.3:3543700-3543719 None:intergenic 15.0%
!!! CAAATACATATAAGATATTT+TGG + chr1.3:3542495-3542514 None:intergenic 15.0%
!! AAATACAAATATTAGCATGT+AGG + chr1.3:3541487-3541506 None:intergenic 20.0%
!! AAATTGATTAGTAGTATGAT+AGG - chr1.3:3541224-3541243 MS.gene043991:CDS 20.0%
!! AACATGAATGAACATATATA+AGG + chr1.3:3542725-3542744 None:intergenic 20.0%
!! AAGTTATTAACGTTACAATT+TGG - chr1.3:3542096-3542115 MS.gene043991:intron 20.0%
!! AAGTTATTAACGTTACAATT+TGG + chr1.3:3542115-3542096 None:intergenic 20.0%
!! AATTAAGAAGTGATATTGTA+AGG + chr1.3:3542666-3542685 None:intergenic 20.0%
!! ACACAACATAATAAAGAATA+AGG + chr1.3:3541695-3541714 None:intergenic 20.0%
!! ATCATAAGATTGGAAATAAA+TGG - chr1.3:3540974-3540993 MS.gene043991:CDS 20.0%
!! ATTAAGAAGTGATATTGTAA+GGG + chr1.3:3542665-3542684 None:intergenic 20.0%
!! ATTGTAACGTTAATAACTTA+TGG - chr1.3:3542467-3542486 MS.gene043991:intron 20.0%
!! ATTGTAACGTTAATAACTTA+TGG + chr1.3:3542486-3542467 None:intergenic 20.0%
!! CGAAACAAAAAAATAAGTTA+AGG - chr1.3:3542378-3542397 MS.gene043991:intron 20.0%
!! GAAACCAAAAAATAAGTTAA+GGG - chr1.3:3542317-3542336 MS.gene043991:intron 20.0%
!! GAAACCAAAAAATAAGTTAA+GGG + chr1.3:3542336-3542317 None:intergenic 20.0%
!! GAAATCAAAAAGTAACTTAA+GGG + chr1.3:3542123-3542142 None:intergenic 20.0%
!! TAATCTTTAAATATCACTTC+AGG + chr1.3:3542942-3542961 None:intergenic 20.0%
!! TATATGTTCATATTCTTTCT+AGG - chr1.3:3542692-3542711 MS.gene043991:intron 20.0%
!! TCATAAGATTGGAAATAAAT+GGG - chr1.3:3540975-3540994 MS.gene043991:CDS 20.0%
!! TTATTATTATAGTCAAAGGA+CGG + chr1.3:3543452-3543471 None:intergenic 20.0%
!! TTCATATAAAATGTACTCTT+AGG - chr1.3:3542552-3542571 MS.gene043991:intron 20.0%
!! TTGTAACGTTAATAACTTAT+GGG - chr1.3:3542468-3542487 MS.gene043991:intron 20.0%
!! TTGTAACGTTAATAACTTAT+GGG + chr1.3:3542487-3542468 None:intergenic 20.0%
!! TTTAGGCTTAATTAATGATT+TGG - chr1.3:3542036-3542055 MS.gene043991:intron 20.0%
!!! AACGAAACTTTTAATAGTTA+AGG - chr1.3:3542407-3542426 MS.gene043991:intron 20.0%
!!! AACTATTAAAAGTTTCGTTT+TGG + chr1.3:3542406-3542425 None:intergenic 20.0%
!!! ACGAAACTTTTAATAGTTAA+GGG - chr1.3:3542408-3542427 MS.gene043991:intron 20.0%
!!! ATAATGAGATAAAGAACTTT+TGG - chr1.3:3542775-3542794 MS.gene043991:intron 20.0%
!!! ATTGGACATGTATTTTAAAA+CGG - chr1.3:3541565-3541584 MS.gene043991:CDS 20.0%
!!! CTTATTTTTTTGTTTCGTTT+TGG + chr1.3:3542375-3542394 None:intergenic 20.0%
!!! GCTATTATTATTTGACTTTA+GGG - chr1.3:3541117-3541136 MS.gene043991:CDS 20.0%
!!! TGCTATTATTATTTGACTTT+AGG - chr1.3:3541116-3541135 MS.gene043991:CDS 20.0%
! AACGAAACCAAAAATAGTTA+AGG + chr1.3:3542155-3542174 None:intergenic 25.0%
! AACGAATGTATTAGAGTTAA+GGG - chr1.3:3542286-3542305 MS.gene043991:intron 25.0%
! ACAACTGTACAAATTCATAT+CGG + chr1.3:3543051-3543070 None:intergenic 25.0%
! ACGAAACCAAAAATAGTTAA+GGG + chr1.3:3542154-3542173 None:intergenic 25.0%
! ATTCAGATGATAAATCTTCA+GGG + chr1.3:3542845-3542864 None:intergenic 25.0%
! CAGAAATTGACATGTTTATA+AGG - chr1.3:3541909-3541928 MS.gene043991:intron 25.0%
! CGAAACCAAAAAATAAGTTA+AGG - chr1.3:3542316-3542335 MS.gene043991:intron 25.0%
! CGAAACCAAAAAATAAGTTA+AGG + chr1.3:3542335-3542316 None:intergenic 25.0%
! CGAAATCAAAAAGTAACTTA+AGG + chr1.3:3542124-3542143 None:intergenic 25.0%
! GAAACCAAAAAGTAACTTAA+GGG - chr1.3:3542439-3542458 MS.gene043991:intron 25.0%
! GTAACCAACAAATAACTTAA+GGG + chr1.3:3542063-3542082 None:intergenic 25.0%
! TCTTTGCTTATTTATGTATC+CGG - chr1.3:3543648-3543667 MS.gene043991:CDS 25.0%
! TGTAACCAACAAATAACTTA+AGG + chr1.3:3542064-3542083 None:intergenic 25.0%
! TGTTGTATTACTTGACTTTA+AGG - chr1.3:3541176-3541195 MS.gene043991:CDS 25.0%
! TTAAGAAGTGATATTGTAAG+GGG + chr1.3:3542664-3542683 None:intergenic 25.0%
!!! CTTATTTTTTGGTTTCGTTT+TGG - chr1.3:3542187-3542206 MS.gene043991:intron 25.0%
!!! CTTATTTTTTGGTTTCGTTT+TGG + chr1.3:3542206-3542187 None:intergenic 25.0%
!!! GTTACTTTTTGATTTCGTTT+TGG - chr1.3:3542127-3542146 MS.gene043991:intron 25.0%
!!! GTTATTTGTTGGTTACATTT+TGG - chr1.3:3542067-3542086 MS.gene043991:intron 25.0%
!!! TAGTCCCTTAACTTATTTTT+TGG - chr1.3:3542176-3542195 MS.gene043991:intron 25.0%
AAACATGGTGGTAAAATATC+TGG + chr1.3:3542975-3542994 None:intergenic 30.0%
AAAGCATAACTTTCATCAAG+AGG + chr1.3:3541775-3541794 None:intergenic 30.0%
AACATGGTGGTAAAATATCT+GGG + chr1.3:3542974-3542993 None:intergenic 30.0%
AATTATGATGGCACCAAAAA+AGG + chr1.3:3541202-3541221 None:intergenic 30.0%
ATACATTCGTTCTAACGTAA+AGG + chr1.3:3542277-3542296 None:intergenic 30.0%
ATAGTGCACATTGCAAAAAT+TGG - chr1.3:3541547-3541566 MS.gene043991:CDS 30.0%
ATGTATCTAACGAGATACAT+CGG + chr1.3:3543598-3543617 None:intergenic 30.0%
CATTCAGATGATAAATCTTC+AGG + chr1.3:3542846-3542865 None:intergenic 30.0%
CGAAACCAAAAAGTAACTTA+AGG - chr1.3:3542438-3542457 MS.gene043991:intron 30.0%
GAACGAATGTATTAGAGTTA+AGG - chr1.3:3542285-3542304 MS.gene043991:intron 30.0%
GTAGCTCATGTTCAAAAATA+CGG - chr1.3:3540805-3540824 MS.gene043991:intron 30.0%
GTGCTATCATATTCATGAAA+CGG + chr1.3:3543191-3543210 None:intergenic 30.0%
TCATGAATATGATAGCACTA+TGG - chr1.3:3543193-3543212 MS.gene043991:intron 30.0%
TCTCAGAAGAAAAGTAATCT+GGG + chr1.3:3543816-3543835 None:intergenic 30.0%
! ATTGAGTTGCATCATAAGAT+TGG - chr1.3:3540964-3540983 MS.gene043991:CDS 30.0%
! ATTTGTCTGCTCTTTTGTTA+CGG - chr1.3:3541980-3541999 MS.gene043991:intron 30.0%
! TTTGGTCCCTTAACTATTTT+TGG - chr1.3:3542145-3542164 MS.gene043991:intron 30.0%
!! CTTGGACATGTATTTTGAAA+CGG + chr1.3:3541344-3541363 None:intergenic 30.0%
!!! CTTGTTTTTTGGTTTCGTTT+TGG + chr1.3:3542344-3542363 None:intergenic 30.0%
!!! GACATGTATTTTAAAACGGA+GGG - chr1.3:3541569-3541588 MS.gene043991:CDS 30.0%
!!! GTTACTTTTTGGTTTCGTTT+TGG + chr1.3:3542435-3542454 None:intergenic 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG - chr1.3:3542207-3542226 MS.gene043991:intron 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG + chr1.3:3542226-3542207 None:intergenic 30.0%
!!! TGGTCTCTTAACTTGTTTTT+TGG + chr1.3:3542355-3542374 None:intergenic 30.0%
!!! TTTAGTTTTCCCCTCTTATT+TGG - chr1.3:3543753-3543772 MS.gene043991:CDS 30.0%
AAAAATACGGTGAGGGAAAT+TGG - chr1.3:3540818-3540837 MS.gene043991:intron 35.0%
AAATTCATATCGGACTTCCA+AGG + chr1.3:3543041-3543060 None:intergenic 35.0%
AACTGATGATCAAATACTGC+TGG + chr1.3:3543101-3543120 None:intergenic 35.0%
AATTCATATCGGACTTCCAA+GGG + chr1.3:3543040-3543059 None:intergenic 35.0%
ACTGATGATCAAATACTGCT+GGG + chr1.3:3543100-3543119 None:intergenic 35.0%
AGAAGCTTATCAAAACATGG+TGG + chr1.3:3542987-3543006 None:intergenic 35.0%
AGTCTTCATGAACCCATATA+TGG + chr1.3:3543249-3543268 None:intergenic 35.0%
ATATATGGGCTCAAAAGAAG+AGG + chr1.3:3543234-3543253 None:intergenic 35.0%
CATGTTCAAAAATACGGTGA+GGG - chr1.3:3540811-3540830 MS.gene043991:intron 35.0%
CTCTCAGAAGAAAAGTAATC+TGG + chr1.3:3543817-3543836 None:intergenic 35.0%
GATAAATCTTCAGGGTAGAT+TGG + chr1.3:3542837-3542856 None:intergenic 35.0%
GCTAGAAGCTTATCAAAACA+TGG + chr1.3:3542990-3543009 None:intergenic 35.0%
GGTTAGCAATATACTCTTTC+CGG - chr1.3:3543527-3543546 MS.gene043991:CDS 35.0%
GTCTTCATGAACCCATATAT+GGG + chr1.3:3543248-3543267 None:intergenic 35.0%
TAACGGTCAAAATTGTGCAT+TGG + chr1.3:3541385-3541404 None:intergenic 35.0%
TCATGTTCAAAAATACGGTG+AGG - chr1.3:3540810-3540829 MS.gene043991:intron 35.0%
TGCTTATTTATGTATCCGGA+GGG - chr1.3:3543652-3543671 MS.gene043991:CDS 35.0%
TGGTCCCTTAAGTTATTTGT+TGG - chr1.3:3542056-3542075 MS.gene043991:intron 35.0%
TTGCTTATTTATGTATCCGG+AGG - chr1.3:3543651-3543670 MS.gene043991:CDS 35.0%
! CAGTTCCAATTTCTCTAGAA+AGG - chr1.3:3543348-3543367 MS.gene043991:intron 35.0%
! CATATGTGAAGTTGTTGACT+TGG + chr1.3:3541362-3541381 None:intergenic 35.0%
! CTCTCAATATGTCAGTTTTG+TGG + chr1.3:3540582-3540601 None:intergenic 35.0%
! CTTCTTTTGAGCCCATATAT+GGG - chr1.3:3543234-3543253 MS.gene043991:intron 35.0%
! TCTTCTTTTGAGCCCATATA+TGG - chr1.3:3543233-3543252 MS.gene043991:intron 35.0%
! TGACTCCTTTCTAGAGAAAT+TGG + chr1.3:3543356-3543375 None:intergenic 35.0%
! TGGAAATAAATGGGCTCAAA+TGG - chr1.3:3540984-3541003 MS.gene043991:CDS 35.0%
! TGTGCTAAGATTTGCTTCAT+TGG + chr1.3:3543390-3543409 None:intergenic 35.0%
! TTCTGAGAGAGATGATTTGA+GGG - chr1.3:3543828-3543847 MS.gene043991:CDS 35.0%
! TTCTTTTCTTTTCAGTTGCC+TGG - chr1.3:3542744-3542763 MS.gene043991:intron 35.0%
!! TGAAACGGATTGTAGCTATT+TGG + chr1.3:3543176-3543195 None:intergenic 35.0%
!!! ACGGAGGGAGTATTTTTTTT+TGG + chr1.3:3541325-3541344 None:intergenic 35.0%
!!! CTTGACTTTAAGGCCTTTTT+TGG - chr1.3:3541186-3541205 MS.gene043991:CDS 35.0%
!!! GACATGTATTTTGAAACGGA+GGG + chr1.3:3541340-3541359 None:intergenic 35.0%
!!! GGACATGTATTTTAAAACGG+AGG - chr1.3:3541568-3541587 MS.gene043991:CDS 35.0%
!!! TGGTCCCTTAAGTTACTTTT+TGG + chr1.3:3542135-3542116 None:intergenic 35.0%
!!! TGTTTTGATAAGCTTCTAGC+TGG - chr1.3:3542990-3543009 MS.gene043991:intron 35.0%
AAAGAAAGGTCCATGGACAA+CGG - chr1.3:3540765-3540784 MS.gene043991:intron 40.0%
AACACAAGATGCAAGAAACG+GGG - chr1.3:3542798-3542817 MS.gene043991:intron 40.0%
AAGCAAATCTTAGCACACGA+TGG - chr1.3:3543393-3543412 MS.gene043991:intron 40.0%
ACCACCATCATGTGGATAAT+CGG + chr1.3:3541725-3541744 None:intergenic 40.0%
AGCAAATCTTAGCACACGAT+GGG - chr1.3:3543394-3543413 MS.gene043991:intron 40.0%
ATCATGACCTGCCAAATAAG+AGG + chr1.3:3543767-3543786 None:intergenic 40.0%
ATGAACATGTGCTCAACTGA+TGG - chr1.3:3543479-3543498 MS.gene043991:CDS 40.0%
ATGACACTTAATACTCCCTC+CGG + chr1.3:3543670-3543689 None:intergenic 40.0%
ATGATTCGACGTTCTTCTTC+AGG + chr1.3:3540946-3540965 None:intergenic 40.0%
ATGGTGGTAAAATATCTGGG+CGG + chr1.3:3542971-3542990 None:intergenic 40.0%
CTGATGATCAAATACTGCTG+GGG + chr1.3:3543099-3543118 None:intergenic 40.0%
GAAATTGGAACTGACTGAAC+AGG + chr1.3:3543341-3543360 None:intergenic 40.0%
GAACACAAGATGCAAGAAAC+GGG - chr1.3:3542797-3542816 MS.gene043991:intron 40.0%
GAGTCAGATGATCAGTATGA+TGG - chr1.3:3543419-3543438 MS.gene043991:intron 40.0%
GATGTTGAGTCTGTGAGTAT+TGG + chr1.3:3543286-3543305 None:intergenic 40.0%
GCTGATCAAGAAACTGATGA+AGG - chr1.3:3540706-3540725 MS.gene043991:intron 40.0%
GGAACACAAGATGCAAGAAA+CGG - chr1.3:3542796-3542815 MS.gene043991:intron 40.0%
GGATCTGATTAAATGCAGCA+TGG + chr1.3:3543795-3543814 None:intergenic 40.0%
TAAAGGACCAAAGTGGTTGA+CGG + chr1.3:3542260-3542279 None:intergenic 40.0%
TCATGACCTGCCAAATAAGA+GGG + chr1.3:3543766-3543785 None:intergenic 40.0%
TCTAACGTAAAGGACCAAAG+TGG + chr1.3:3542267-3542286 None:intergenic 40.0%
TCTGAGAGAGATGATTTGAG+GGG - chr1.3:3543829-3543848 MS.gene043991:CDS 40.0%
TGAACATGTGCTCAACTGAT+GGG - chr1.3:3543480-3543499 MS.gene043991:CDS 40.0%
! AAAAGAAGAGGCTTTTGGTG+TGG + chr1.3:3543222-3543241 None:intergenic 40.0%
! CTTCTGAGAGAGATGATTTG+AGG - chr1.3:3543827-3543846 MS.gene043991:CDS 40.0%
! GATGATGGCGATCACAAAAT+AGG - chr1.3:3540625-3540644 MS.gene043991:CDS 40.0%
! TTTGGTTCAATATCCTCCCA+TGG + chr1.3:3543158-3543177 None:intergenic 40.0%
!! TCTGTGAGTATTGGAGTGAA+GGG + chr1.3:3543277-3543296 None:intergenic 40.0%
!!! GGACATGTATTTTGAAACGG+AGG + chr1.3:3541341-3541360 None:intergenic 40.0%
AACGGCAGAGGATGAAATCT+TGG - chr1.3:3540783-3540802 MS.gene043991:intron 45.0%
ACTGATGAAGGAGATACCAC+TGG - chr1.3:3540718-3540737 MS.gene043991:intron 45.0%
AGCGCTTCAAGCGAAGATTA+TGG - chr1.3:3540553-3540572 MS.gene043991:CDS 45.0%
AGGGAAATTGGAACTCTGTC+CGG - chr1.3:3540830-3540849 MS.gene043991:intron 45.0%
ATCTCATTATCTGTGCGTCC+AGG + chr1.3:3542765-3542784 None:intergenic 45.0%
CAAGCGAAGTCATCAATCAC+AGG + chr1.3:3543883-3543902 None:intergenic 45.0%
CACTCAGCTGAAACTACTCA+GGG - chr1.3:3543506-3543525 MS.gene043991:CDS 45.0%
CATGACCTGCCAAATAAGAG+GGG + chr1.3:3543765-3543784 None:intergenic 45.0%
CTACTACTTACCCTCAAGCA+GGG - chr1.3:3542624-3542643 MS.gene043991:intron 45.0%
CTGAGACCTGATCTCAGAAA+GGG - chr1.3:3540910-3540929 MS.gene043991:intron 45.0%
CTTGAGGGTAAGTAGTAGGT+TGG + chr1.3:3542622-3542641 None:intergenic 45.0%
GAAAAGCTGTCGTCTACGAT+GGG - chr1.3:3540879-3540898 MS.gene043991:intron 45.0%
GGAGAAGGTGGTCTAAAGAA+AGG - chr1.3:3540751-3540770 MS.gene043991:intron 45.0%
GTGGTCTAAAGAAAGGTCCA+TGG - chr1.3:3540758-3540777 MS.gene043991:intron 45.0%
GTTATGAGTAGCCCTTCAAG+CGG - chr1.3:3540658-3540677 MS.gene043991:CDS 45.0%
GTTGACGGAGGAAGAGTTAA+GGG + chr1.3:3542245-3542264 None:intergenic 45.0%
TGTTCTCTGCTTCATCATGC+TGG + chr1.3:3542914-3542933 None:intergenic 45.0%
! CTGTGATTGATGACTTCGCT+TGG - chr1.3:3543881-3543900 MS.gene043991:CDS 45.0%
! GATGCCGATTATCCACATGA+TGG - chr1.3:3541718-3541737 MS.gene043991:intron 45.0%
! GCTCTTTTGTTACGGTCACA+AGG - chr1.3:3541988-3542007 MS.gene043991:intron 45.0%
! GGCTCAAAAGAAGAGGCTTT+TGG + chr1.3:3543227-3543246 None:intergenic 45.0%
! TCTGAGACCTGATCTCAGAA+AGG - chr1.3:3540909-3540928 MS.gene043991:intron 45.0%
!! ATTGCACCCTTTCTGAGATC+AGG + chr1.3:3540919-3540938 None:intergenic 45.0%
!! CTGTGAGTATTGGAGTGAAG+GGG + chr1.3:3543276-3543295 None:intergenic 45.0%
!! GATTATCCACATGATGGTGG+TGG - chr1.3:3541724-3541743 MS.gene043991:intron 45.0%
!! GTCTGTGAGTATTGGAGTGA+AGG + chr1.3:3543278-3543297 None:intergenic 45.0%
!! GTTTTCCCCTCTTATTTGGC+AGG - chr1.3:3543757-3543776 MS.gene043991:CDS 45.0%
!! GTTTTGACAACCCTGCTTGA+GGG + chr1.3:3542637-3542656 None:intergenic 45.0%
!! TGTGAGTATTGGAGTGAAGG+GGG + chr1.3:3543275-3543294 None:intergenic 45.0%
!!! TGTTTTGACAACCCTGCTTG+AGG + chr1.3:3542638-3542657 None:intergenic 45.0%
!!! CAAATATTAATATATATTTT+AGG - chr1.3:3542019-3542038 MS.gene043991:intron 5.0%
!!! TTTTTATTCAATTTTATTTT+TGG - chr1.3:3541798-3541817 MS.gene043991:intron 5.0%
ACAGGCTCAACTGGAGGATA+TGG + chr1.3:3543323-3543342 None:intergenic 50.0%
ACTGACTGAACAGGCTCAAC+TGG + chr1.3:3543332-3543351 None:intergenic 50.0%
AGCGCTTCAAGCGAAGATGA+TGG - chr1.3:3540610-3540629 MS.gene043991:CDS 50.0%
CCACTCAGCTGAAACTACTC+AGG - chr1.3:3543505-3543524 MS.gene043991:CDS 50.0%
CCTACTACTTACCCTCAAGC+AGG - chr1.3:3542623-3542642 MS.gene043991:intron 50.0%
CCTGAGTAGTTTCAGCTGAG+TGG + chr1.3:3543508-3543527 None:intergenic 50.0%
CCTGCTTGAGGGTAAGTAGT+AGG + chr1.3:3542626-3542645 None:intergenic 50.0%
GAAGACGAAGGAGACGACAT+AGG + chr1.3:3543134-3543153 None:intergenic 50.0%
GATCATCATCGCCGCTTGAA+GGG + chr1.3:3540672-3540691 None:intergenic 50.0%
GATGAAGGAGATACCACTGG+AGG - chr1.3:3540721-3540740 MS.gene043991:intron 50.0%
GCCGATTATCCACATGATGG+TGG - chr1.3:3541721-3541740 MS.gene043991:intron 50.0%
GGAAAAGCTGTCGTCTACGA+TGG - chr1.3:3540878-3540897 MS.gene043991:intron 50.0%
GGTTGACGGAGGAAGAGTTA+AGG + chr1.3:3542246-3542265 None:intergenic 50.0%
GTCTCCTTCGTCTTCTCCAT+GGG - chr1.3:3543139-3543158 MS.gene043991:intron 50.0%
TCTTCCTCCGTCAACCACTT+TGG - chr1.3:3542250-3542269 MS.gene043991:intron 50.0%
TGAAGTCCACCACCATCATG+TGG + chr1.3:3541733-3541752 None:intergenic 50.0%
! AACTCTGTCCGGAAGTGTAC+CGG - chr1.3:3540841-3540860 MS.gene043991:intron 50.0%
!! ATCATGCTGGCTGGCTTCAT+TGG + chr1.3:3542901-3542920 None:intergenic 50.0%
AAATACTGCTGGGGCAGCAG+GGG + chr1.3:3543090-3543109 None:intergenic 55.0%
ACTGGAGGAGAAGGAGGAGA+AGG - chr1.3:3540736-3540755 MS.gene043991:intron 55.0%
AGGACCAAAGTGGTTGACGG+AGG + chr1.3:3542257-3542276 None:intergenic 55.0%
ATGGGCTCAAATGGCTGCAC+TGG - chr1.3:3540993-3541012 MS.gene043991:CDS 55.0%
CAAATACTGCTGGGGCAGCA+GGG + chr1.3:3543091-3543110 None:intergenic 55.0%
CGATCATCATCGCCGCTTGA+AGG + chr1.3:3540673-3540692 None:intergenic 55.0%
CGTCTCCTTCGTCTTCTCCA+TGG - chr1.3:3543138-3543157 MS.gene043991:intron 55.0%
CTCTGCTTCATCATGCTGGC+TGG + chr1.3:3542910-3542929 None:intergenic 55.0%
GACTGAACAGGCTCAACTGG+AGG + chr1.3:3543329-3543348 None:intergenic 55.0%
GAGCAAGTCCGGTACACTTC+CGG + chr1.3:3540852-3540871 None:intergenic 55.0%
GATACCACTGGAGGAGAAGG+AGG - chr1.3:3540730-3540749 MS.gene043991:intron 55.0%
GCGGCGATGATGATCGCAAA+AGG - chr1.3:3540677-3540696 MS.gene043991:intron 55.0%
GGAGATACCACTGGAGGAGA+AGG - chr1.3:3540727-3540746 MS.gene043991:intron 55.0%
TCAAATACTGCTGGGGCAGC+AGG + chr1.3:3543092-3543111 None:intergenic 55.0%
TCAATCACAGGCGCAGCATC+TGG + chr1.3:3543871-3543890 None:intergenic 55.0%
TCATCCTCTGCCGTTGTCCA+TGG + chr1.3:3540778-3540797 None:intergenic 55.0%
TCCTCCCATGGAGAAGACGA+AGG + chr1.3:3543146-3543165 None:intergenic 55.0%
TCCTTCGTCTTCTCCATGGG+AGG - chr1.3:3543142-3543161 MS.gene043991:intron 55.0%
TTCTCCTCCTTCTCCTCCAG+TGG + chr1.3:3540737-3540756 None:intergenic 55.0%
TTTCCCACAGCGAGCAAGTC+CGG + chr1.3:3540863-3540882 None:intergenic 55.0%
!! GACTTCCAAGGGCGCTTTGA+GGG + chr1.3:3543029-3543048 None:intergenic 55.0%
AGGTCCATGGACAACGGCAG+AGG - chr1.3:3540771-3540790 MS.gene043991:intron 60.0%
GGAGGAGAAGGAGGAGAAGG+TGG - chr1.3:3540739-3540758 MS.gene043991:intron 60.0%
! GTACCGGACTTGCTCGCTGT+GGG - chr1.3:3540857-3540876 MS.gene043991:intron 60.0%
! TGTACCGGACTTGCTCGCTG+TGG - chr1.3:3540856-3540875 MS.gene043991:intron 60.0%
!! GGACTTCCAAGGGCGCTTTG+AGG + chr1.3:3543030-3543049 None:intergenic 60.0%
! TGCGTCCCTCAAAGCGCCCT+TGG - chr1.3:3543021-3543040 MS.gene043991:intron 65.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 3540547 3543921 3540547 ID=MS.gene043991
chr1.3 mRNA 3540547 3543921 3540547 ID=MS.gene043991.t1;Parent=MS.gene043991
chr1.3 exon 3543454 3543921 3543454 ID=MS.gene043991.t1.exon1;Parent=MS.gene043991.t1
chr1.3 CDS 3543454 3543921 3543454 ID=cds.MS.gene043991.t1;Parent=MS.gene043991.t1
chr1.3 exon 3540941 3541709 3540941 ID=MS.gene043991.t1.exon2;Parent=MS.gene043991.t1
chr1.3 CDS 3540941 3541709 3540941 ID=cds.MS.gene043991.t1;Parent=MS.gene043991.t1
chr1.3 exon 3540547 3540689 3540547 ID=MS.gene043991.t1.exon3;Parent=MS.gene043991.t1
chr1.3 CDS 3540547 3540689 3540547 ID=cds.MS.gene043991.t1;Parent=MS.gene043991.t1
Gene Sequence

>MS.gene043991

ATGAGTAGCGCTTCAAGCGAAGATTATGGCGACCACAAAACTGACATATTGAGAGTCATGAATAGCGCTTCAAGCGAAGATGATGGCGATCACAAAATAGGCATATTGAGTGTTATGAGTAGCCCTTCAAGCGGCGATGATGATCGCAAAAGGCTATCAGCTGATCAAGAAACTGATGAAGGAGATACCACTGGAGGAGAAGGAGGAGAAGGTGGTCTAAAGAAAGGTCCATGGACAACGGCAGAGGATGAAATCTTGGTAGCTCATGTTCAAAAATACGGTGAGGGAAATTGGAACTCTGTCCGGAAGTGTACCGGACTTGCTCGCTGTGGGAAAAGCTGTCGTCTACGATGGGCAAATCATCTGAGACCTGATCTCAGAAAGGGTGCAATTACTCCTGAAGAAGAACGTCGAATCATTGAGTTGCATCATAAGATTGGAAATAAATGGGCTCAAATGGCTGCACTGGTAATATCATTCTTCTTGATATTTTTTTATTCTTTCCTTTTTTATATTTGCAAATCTATTGTTATGATGTTTGCAATATCTTTATATTTCATAGATTTTATTGCTATTATTATTTGACTTTAGGGTTTTTTTATTTCATAGATTTTATTGTTTTATTATTTTGTTGTATTACTTGACTTTAAGGCCTTTTTTGGTGCCATCATAATTACAAATTGATTAGTAGTATGATAGGATACAGAATAAGAATATGAAATTGAATAGTAGTTTAATTATATTTCTGTGATGATATATAAAGCTTGACTTGTAACCAAAAAAAAATACTCCCTCCGTTTCAAAATACATGTCCAAGTCAACAACTTCACATATGCCAATGCACAATTTTGACCGTTAATATCTTTAATTATCTAAAGTAAAAAATTATAAAAATTTAATATTTTGAAAATATTTGTCGAGACAAATCAAACAACATCCTACATGCTAATATTTGTATTTATACATTAGTAAAAAACTATGGTCAAAGTAAGTCAAGTGAATAGTGCACATTGCAAAAATTGGACATGTATTTTAAAACGGAGGGAGTATATATATAAAGCTTGACTAATAAGTCTGTTATATGATTATATCAGTCAATACTTTGTGATACAGCTCAGAAACTTGTCTTGTAGAACTTTGTATAGCCTTATTCTTTATTATGTTGTGTGAAGATGCCGATTATCCACATGATGGTGGTGGACTTCATGAATTGTTAAAGTTGTTGCCTCTTGATGAAAGTTATGCTTTTTTTTTTTATTCAATTTTATTTTTGGATGATGAGAATTAAAGAGATAAAATTATACAATTAGGTTAGACATTAAATAGTAAACAATTTAATAAAGTCAAGACTTTTATTGCATTCAGAAATTGACATGTTTATAAGGAAATAAAATATTTTTGTTCAAAAAGGAAATAAATATTTTGATTTGAACATTTGTCTGCTCTTTTGTTACGGTCACAAGGTCATTTTACAAATATTAATATATATTTTAGGCTTAATTAATGATTTGGTCCCTTAAGTTATTTGTTGGTTACATTTTGGTCCCATAAGTTATTAACGTTACAATTTGGTCCCTTAAGTTACTTTTTGATTTCGTTTTGGTCCCTTAACTATTTTTGGTTTCGTTTTAGTCCCTTAACTTATTTTTTGGTTTCGTTTTGGTCCCTTAACTTATTTTTTGGTTTCGTTTTGGTCCCTTAACTCTTCCTCCGTCAACCACTTTGGTCCTTTACGTTAGAACGAATGTATTAGAGTTAAGGGACCAAAACGAAACCAAAAAATAAGTTAAGGGACCAAAACGAAACCAAAAAACAAGTTAAGAGACCAAAACGAAACAAAAAAATAAGTTAAGGGACCAAAACGAAACTTTTAATAGTTAAGGGACCAAAACGAAACCAAAAAGTAACTTAAGGGACCAAATTGTAACGTTAATAACTTATGGGACCAAAATATCTTATATGTATTTGGGCTAAATAGATTCTTGACCTAGTAAATAAACATTTTTTCATATAAAATGTACTCTTAGGTTTGTAATTGTATCTATCTGCACACATTTTTTTATAAATGTGAACCAACCTACTACTTACCCTCAAGCAGGGTTGTCAAAACAAAACCCCTTACAATATCACTTCTTAATTGTGTCTTATATGTTCATATTCTTTCTAGGATATTTGCCTTATATATGTTCATTCATGTTTCTTTTCTTTTCAGTTGCCTGGACGCACAGATAATGAGATAAAGAACTTTTGGAACACAAGATGCAAGAAACGGGGTCGAGCAAACTTACCAATCTACCCTGAAGATTTATCATCTGAATGTCTGCTGAATCAAGAAAATGCTGACATGTTGACCAATGAAGCCAGCCAGCATGATGAAGCAGAGAACAAAGTACCTGAAGTGATATTTAAAGATTACAAACTCCGCCCAGATATTTTACCACCATGTTTTGATAAGCTTCTAGCTGGCTTGTTATTGCGTCCCTCAAAGCGCCCTTGGAAGTCCGATATGAATTTGTACAGTTGTAGCAATAATGCTGCTACCCCTGCTGCCCCAGCAGTATTTGATCATCAGTTCAGAAAATATCCTATGTCGTCTCCTTCGTCTTCTCCATGGGAGGATATTGAACCAAATAGCTACAATCCGTTTCATGAATATGATAGCACTATGGTTGCCACACCAAAAGCCTCTTCTTTTGAGCCCATATATGGGTTCATGAAGACTGAGCCCCCTTCACTCCAATACTCACAGACTCAACATCGTAGCTATATGATTCCATATCCTCCAGTTGAGCCTGTTCAGTCAGTTCCAATTTCTCTAGAAAGGAGTCATTTTCTTCAATCCAATGAAGCAAATCTTAGCACACGATGGGATGAGTCAGATGATCAGTATGATGGTTTATTTCCGTCCTTTGACTATAATAATAATAATCATATGAACATGTGCTCAACTGATGGGCACCACTCAGCTGAAACTACTCAGGGTTAGCAATATACTCTTTCCGGTCTTATATATAAACAATTATTTTTTTCTATAGATGTATTAAACAACCGATGTATCTCGTTAGATACATCAGTTATTCAATTAATCTAAAAAAAAAAAATCTTTGCTTATTTATGTATCCGGAGGGAGTATTAAGTGTCATTTCATTTCCGTTTATAATTATGAACTATCATGACCTTTTATTTAAGAGATTTCATTTCATTAATTTAGTTTTCCCCTCTTATTTGGCAGGTCATGATATTAACCATGCTGCATTTAATCAGATCCCAGATTACTTTTCTTCTGAGAGAGATGATTTGAGGGGAAAAATATTTGCGCATCCAGATGCTGCGCCTGTGATTGATGACTTCGCTTGGTATTATAAAATAGAATAA
Protein sequence

>MS.gene043991.t1

MSSASSEDYGDHKTDILRVMNSASSEDDGDHKIGILSVMSSPSSGDDDRKRLSADQETDEGDTTGGEGGEGGLKKGPWTTAEDEILVAHVQKYGEGNWNSVRKCTGLARCGKSCRLRWANHLRPDLRKGAITPEEERRIIELHHKIGNKWAQMAALLPGRTDNEIKNFWNTRCKKRGRANLPIYPEDLSSECLLNQENADMLTNEASQHDEAENKVPEVIFKDYKLRPDILPPCFDKLLAGLLLRPSKRPWKSDMNLYSCSNNAATPAAPAVFDHQFRKYPMSSPSSSPWEDIEPNSYNPFHEYDSTMVATPKASSFEPIYGFMKTEPPSLQYSQTQHRSYMIPYPPVEPVQSVPISLERSHFLQSNEANLSTRWDESDDQYDGLFPSFDYNNNNHMNMCSTDGHHSAETTQGHDINHAAFNQIPDYFSSERDDLRGKIFAHPDAAPVIDDFAWYYKIE