Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044186.t1 | XP_003601381.1 | 94.9 | 255 | 13 | 0 | 1 | 255 | 1 | 255 | 2.00E-102 | 382.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044186.t1 | P46668 | 54.8 | 124 | 50 | 3 | 1 | 120 | 2 | 123 | 3.4e-26 | 120.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044186.t1 | G7J6Q0 | 94.9 | 255 | 13 | 0 | 1 | 255 | 1 | 255 | 1.5e-102 | 382.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene044186.t1 | TF | HB-HD-ZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044186.t1 | MTR_3g080100 | 95.686 | 255 | 11 | 0 | 1 | 255 | 1 | 255 | 0.0 | 497 |
| MS.gene044186.t1 | MTR_3g080100 | 95.833 | 216 | 9 | 0 | 40 | 255 | 1 | 216 | 1.60e-152 | 424 |
| MS.gene044186.t1 | MTR_8g089895 | 37.987 | 308 | 132 | 9 | 1 | 255 | 1 | 302 | 6.45e-54 | 176 |
| MS.gene044186.t1 | MTR_3g086790 | 40.604 | 298 | 129 | 8 | 1 | 255 | 1 | 293 | 1.70e-50 | 167 |
| MS.gene044186.t1 | MTR_6g011610 | 46.465 | 198 | 91 | 4 | 42 | 238 | 63 | 246 | 3.26e-41 | 142 |
| MS.gene044186.t1 | MTR_6g011610 | 46.465 | 198 | 91 | 4 | 42 | 238 | 82 | 265 | 3.28e-41 | 142 |
| MS.gene044186.t1 | MTR_8g468210 | 57.724 | 123 | 51 | 1 | 46 | 168 | 64 | 185 | 1.42e-38 | 136 |
| MS.gene044186.t1 | MTR_5g039000 | 57.600 | 125 | 52 | 1 | 44 | 168 | 62 | 185 | 2.67e-38 | 135 |
| MS.gene044186.t1 | MTR_5g038280 | 60.000 | 110 | 44 | 0 | 47 | 156 | 75 | 184 | 6.87e-37 | 132 |
| MS.gene044186.t1 | MTR_6g007647 | 64.286 | 98 | 35 | 0 | 58 | 155 | 32 | 129 | 9.54e-35 | 125 |
| MS.gene044186.t1 | MTR_8g469430 | 60.577 | 104 | 41 | 0 | 59 | 162 | 89 | 192 | 1.14e-34 | 126 |
| MS.gene044186.t1 | MTR_6g007647 | 64.286 | 98 | 35 | 0 | 58 | 155 | 66 | 163 | 2.27e-34 | 125 |
| MS.gene044186.t1 | MTR_4g107650 | 61.905 | 105 | 40 | 0 | 58 | 162 | 94 | 198 | 4.82e-34 | 125 |
| MS.gene044186.t1 | MTR_7g010020 | 51.938 | 129 | 58 | 2 | 47 | 174 | 71 | 196 | 6.91e-33 | 121 |
| MS.gene044186.t1 | MTR_7g103340 | 47.761 | 134 | 68 | 2 | 52 | 185 | 56 | 187 | 5.22e-30 | 112 |
| MS.gene044186.t1 | MTR_1g061660 | 49.550 | 111 | 56 | 0 | 58 | 168 | 58 | 168 | 1.29e-25 | 100 |
| MS.gene044186.t1 | MTR_8g026960 | 51.163 | 86 | 42 | 0 | 66 | 151 | 41 | 126 | 4.42e-24 | 97.1 |
| MS.gene044186.t1 | MTR_3g092150 | 48.352 | 91 | 47 | 0 | 61 | 151 | 40 | 130 | 3.83e-23 | 94.7 |
| MS.gene044186.t1 | MTR_4g097600 | 47.748 | 111 | 49 | 2 | 43 | 153 | 113 | 214 | 1.45e-20 | 88.6 |
| MS.gene044186.t1 | MTR_4g100550 | 46.667 | 105 | 49 | 1 | 49 | 153 | 110 | 207 | 4.51e-20 | 87.0 |
| MS.gene044186.t1 | MTR_5g019680 | 44.915 | 118 | 53 | 1 | 51 | 168 | 45 | 150 | 4.87e-20 | 85.5 |
| MS.gene044186.t1 | MTR_5g019650 | 45.000 | 120 | 57 | 3 | 51 | 168 | 45 | 157 | 2.46e-19 | 84.0 |
| MS.gene044186.t1 | MTR_1g054285 | 48.113 | 106 | 46 | 2 | 48 | 153 | 145 | 241 | 2.43e-18 | 82.8 |
| MS.gene044186.t1 | MTR_7g093430 | 47.170 | 106 | 47 | 2 | 48 | 153 | 151 | 247 | 2.53e-18 | 82.8 |
| MS.gene044186.t1 | MTR_2g061030 | 42.222 | 135 | 58 | 3 | 19 | 153 | 173 | 287 | 2.65e-18 | 83.2 |
| MS.gene044186.t1 | MTR_4g126900 | 39.130 | 138 | 74 | 2 | 19 | 153 | 45 | 175 | 8.25e-18 | 79.7 |
| MS.gene044186.t1 | MTR_5g013010 | 42.857 | 133 | 56 | 3 | 21 | 152 | 112 | 225 | 1.80e-17 | 80.5 |
| MS.gene044186.t1 | MTR_5g014890 | 46.226 | 106 | 49 | 2 | 48 | 153 | 113 | 210 | 4.26e-17 | 79.0 |
| MS.gene044186.t1 | MTR_1g017090 | 31.667 | 180 | 81 | 5 | 59 | 226 | 130 | 279 | 2.69e-16 | 77.0 |
| MS.gene044186.t1 | MTR_8g006705 | 46.316 | 95 | 44 | 1 | 59 | 153 | 146 | 233 | 6.55e-16 | 76.3 |
| MS.gene044186.t1 | MTR_4g084750 | 44.211 | 95 | 46 | 1 | 59 | 153 | 65 | 152 | 1.89e-14 | 70.1 |
| MS.gene044186.t1 | MTR_3g103590 | 38.406 | 138 | 68 | 4 | 57 | 186 | 143 | 271 | 8.30e-14 | 70.1 |
| MS.gene044186.t1 | MTR_2g038625 | 44.211 | 95 | 46 | 1 | 59 | 153 | 82 | 169 | 3.63e-13 | 67.0 |
| MS.gene044186.t1 | MTR_2g038580 | 44.211 | 95 | 46 | 1 | 59 | 153 | 82 | 169 | 3.63e-13 | 67.0 |
| MS.gene044186.t1 | MTR_5g013010 | 43.956 | 91 | 35 | 2 | 21 | 110 | 112 | 187 | 2.74e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044186.t1 | AT5G65310 | 53.571 | 168 | 65 | 4 | 1 | 155 | 1 | 168 | 4.24e-49 | 164 |
| MS.gene044186.t1 | AT5G65310 | 59.441 | 143 | 47 | 2 | 24 | 155 | 8 | 150 | 9.84e-49 | 162 |
| MS.gene044186.t1 | AT4G40060 | 35.065 | 308 | 123 | 9 | 1 | 255 | 1 | 284 | 1.73e-44 | 152 |
| MS.gene044186.t1 | AT2G22430 | 49.057 | 159 | 75 | 2 | 1 | 155 | 2 | 158 | 2.01e-42 | 147 |
| MS.gene044186.t1 | AT1G69780 | 60.163 | 123 | 48 | 1 | 46 | 168 | 72 | 193 | 2.30e-40 | 141 |
| MS.gene044186.t1 | AT5G15150 | 58.594 | 128 | 49 | 3 | 42 | 166 | 95 | 221 | 5.33e-39 | 138 |
| MS.gene044186.t1 | AT1G26960 | 44.000 | 200 | 97 | 5 | 41 | 235 | 53 | 242 | 1.01e-37 | 133 |
| MS.gene044186.t1 | AT3G01220 | 43.548 | 186 | 95 | 4 | 44 | 224 | 70 | 250 | 2.08e-35 | 128 |
| MS.gene044186.t1 | AT3G01470 | 60.000 | 100 | 40 | 0 | 56 | 155 | 65 | 164 | 3.96e-33 | 121 |
| MS.gene044186.t1 | AT3G61890 | 39.161 | 143 | 82 | 2 | 62 | 202 | 33 | 172 | 1.64e-27 | 106 |
| MS.gene044186.t1 | AT1G27045 | 54.545 | 99 | 45 | 0 | 57 | 155 | 66 | 164 | 5.79e-27 | 104 |
| MS.gene044186.t1 | AT1G27045 | 54.545 | 99 | 45 | 0 | 57 | 155 | 15 | 113 | 8.99e-27 | 102 |
| MS.gene044186.t1 | AT1G27045 | 54.545 | 99 | 45 | 0 | 57 | 155 | 23 | 121 | 1.04e-26 | 102 |
| MS.gene044186.t1 | AT1G27045 | 54.545 | 99 | 45 | 0 | 57 | 155 | 23 | 121 | 1.04e-26 | 102 |
| MS.gene044186.t1 | AT2G46680 | 50.538 | 93 | 46 | 0 | 60 | 152 | 33 | 125 | 2.73e-26 | 103 |
| MS.gene044186.t1 | AT1G27045 | 53.684 | 95 | 44 | 0 | 57 | 151 | 66 | 160 | 1.97e-25 | 100 |
| MS.gene044186.t1 | AT2G46680 | 48.958 | 96 | 48 | 1 | 60 | 154 | 33 | 128 | 6.32e-25 | 99.8 |
| MS.gene044186.t1 | AT2G18550 | 39.521 | 167 | 78 | 4 | 59 | 217 | 61 | 212 | 1.50e-22 | 92.8 |
| MS.gene044186.t1 | AT5G03790 | 50.000 | 92 | 46 | 0 | 59 | 150 | 77 | 168 | 1.19e-21 | 90.5 |
| MS.gene044186.t1 | AT4G36740 | 47.368 | 114 | 56 | 1 | 52 | 161 | 48 | 161 | 2.42e-21 | 89.4 |
| MS.gene044186.t1 | AT4G36740 | 47.368 | 114 | 56 | 1 | 52 | 161 | 49 | 162 | 2.76e-21 | 89.4 |
| MS.gene044186.t1 | AT5G03790 | 52.439 | 82 | 39 | 0 | 59 | 140 | 77 | 158 | 6.87e-21 | 87.4 |
| MS.gene044186.t1 | AT2G36610 | 45.545 | 101 | 47 | 1 | 58 | 150 | 70 | 170 | 1.03e-20 | 87.0 |
| MS.gene044186.t1 | AT5G66700 | 35.429 | 175 | 101 | 5 | 46 | 217 | 60 | 225 | 2.76e-20 | 86.7 |
| MS.gene044186.t1 | AT5G53980 | 42.268 | 97 | 56 | 0 | 59 | 155 | 11 | 107 | 4.22e-19 | 81.6 |
| MS.gene044186.t1 | AT2G01430 | 43.119 | 109 | 55 | 1 | 45 | 153 | 125 | 226 | 3.00e-18 | 82.0 |
| MS.gene044186.t1 | AT5G47370 | 42.424 | 132 | 63 | 2 | 21 | 152 | 101 | 219 | 4.35e-18 | 82.0 |
| MS.gene044186.t1 | AT4G17460 | 42.063 | 126 | 62 | 3 | 32 | 153 | 104 | 222 | 1.31e-17 | 80.5 |
| MS.gene044186.t1 | AT5G06710 | 33.333 | 171 | 103 | 4 | 20 | 187 | 152 | 314 | 1.44e-17 | 81.3 |
| MS.gene044186.t1 | AT4G37790 | 42.241 | 116 | 59 | 2 | 38 | 153 | 106 | 213 | 8.10e-17 | 78.2 |
| MS.gene044186.t1 | AT2G44910 | 46.316 | 95 | 44 | 1 | 59 | 153 | 163 | 250 | 6.11e-16 | 76.3 |
| MS.gene044186.t1 | AT2G22800 | 40.650 | 123 | 71 | 2 | 48 | 169 | 101 | 222 | 1.50e-15 | 74.7 |
| MS.gene044186.t1 | AT3G60390 | 42.593 | 108 | 58 | 1 | 45 | 152 | 148 | 251 | 3.12e-15 | 74.3 |
| MS.gene044186.t1 | AT4G16780 | 43.689 | 103 | 50 | 2 | 51 | 153 | 122 | 216 | 7.41e-15 | 72.8 |
| MS.gene044186.t1 | AT2G01430 | 43.529 | 85 | 44 | 1 | 45 | 125 | 125 | 209 | 1.09e-12 | 65.9 |
| MS.gene044186.t1 | AT1G70920 | 38.525 | 122 | 73 | 1 | 23 | 144 | 5 | 124 | 4.25e-12 | 63.5 |
| MS.gene044186.t1 | AT1G70920 | 38.525 | 122 | 73 | 1 | 23 | 144 | 35 | 154 | 4.38e-12 | 63.9 |
| MS.gene044186.t1 | AT5G06710 | 39.560 | 91 | 54 | 1 | 20 | 110 | 152 | 241 | 5.37e-12 | 64.7 |
Find 36 sgRNAs with CRISPR-Local
Find 42 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCAAGTTCAATGATGAATT+TGG | 0.158147 | 3.4:-76471847 | MS.gene044186:CDS |
| TCGTTCGTGCTCGACGATTT+TGG | 0.160811 | 3.4:+76472245 | None:intergenic |
| CTTTCTATACCTCTTGAAAT+TGG | 0.202435 | 3.4:+76471951 | None:intergenic |
| AACCTTAAGAACATCAAAAT+TGG | 0.244715 | 3.4:+76472183 | None:intergenic |
| TTGAAGTTAGCTGAAGAATT+AGG | 0.251335 | 3.4:-76472298 | MS.gene044186:CDS |
| AACCTAGACAAGTTTCAATT+TGG | 0.262579 | 3.4:-76472270 | MS.gene044186:CDS |
| TAATTCAAGTGGTGTGATTA+AGG | 0.320954 | 3.4:-76471913 | MS.gene044186:CDS |
| ATAATCTCTTTCCAATTGTT+TGG | 0.328373 | 3.4:+76472219 | None:intergenic |
| TTTAGAAAAGAGCTTTGAAT+TGG | 0.355867 | 3.4:-76472347 | MS.gene044186:CDS |
| GATTCTCCTATATGTTTCAA+TGG | 0.381447 | 3.4:-76471876 | MS.gene044186:CDS |
| GTTCAATAACTCAGAAACTA+TGG | 0.387793 | 3.4:-76472660 | MS.gene044186:CDS |
| TCAGAATCAATTTATGAGAA+TGG | 0.408136 | 3.4:-76471784 | MS.gene044186:CDS |
| CATACCTTTGGATTGGTACA+TGG | 0.415046 | 3.4:+76472625 | None:intergenic |
| ACCAAATTCATCATTGAACT+TGG | 0.453246 | 3.4:+76471846 | None:intergenic |
| ACTTATACATACCTTTGGAT+TGG | 0.465929 | 3.4:+76472618 | None:intergenic |
| CTCAGTTGGTATTACAAAGT+AGG | 0.474989 | 3.4:+76471702 | None:intergenic |
| AAAGAACCATTGAAACATAT+AGG | 0.475600 | 3.4:+76471870 | None:intergenic |
| CTTTGAATTGGACAACAAGC+TGG | 0.480175 | 3.4:-76472335 | MS.gene044186:CDS |
| TCAGTTGGTATTACAAAGTA+GGG | 0.482035 | 3.4:+76471703 | None:intergenic |
| ACGAACGAAAACCAAACAAT+TGG | 0.484787 | 3.4:-76472230 | MS.gene044186:CDS |
| GAATGAGACTCTTACTAGAA+AGG | 0.510168 | 3.4:-76472137 | MS.gene044186:intron |
| TGCAAATGCAGGTGTGGATG+TGG | 0.525574 | 3.4:-76472506 | MS.gene044186:intron |
| CAAGAAGATAGCTATGAAGA+TGG | 0.532967 | 3.4:-76472421 | MS.gene044186:CDS |
| TGAAGATGGTAGTTCAATGT+TGG | 0.535009 | 3.4:-76472407 | MS.gene044186:CDS |
| AACCAAATTGAAACTTGTCT+AGG | 0.545141 | 3.4:+76472268 | None:intergenic |
| ATTTCAAGAGGTATAGAAAG+AGG | 0.548836 | 3.4:-76471948 | MS.gene044186:CDS |
| GATCAGAGGAATGAGACAAA+AGG | 0.552396 | 3.4:-76472484 | MS.gene044186:CDS |
| CTTTCCATGTACCAATCCAA+AGG | 0.553684 | 3.4:-76472629 | MS.gene044186:intron |
| TTGGAGAAGAAAAGAAGACT+TGG | 0.569876 | 3.4:-76472388 | MS.gene044186:CDS |
| GTTCATTATTATGATTCAAG+AGG | 0.577370 | 3.4:-76471825 | MS.gene044186:CDS |
| GTAGAATGTCCAATTTCAAG+AGG | 0.608484 | 3.4:-76471960 | MS.gene044186:CDS |
| GAATCAATTTATGAGAATGG+AGG | 0.629666 | 3.4:-76471781 | MS.gene044186:CDS |
| TCAAGAGGTATAGAAAGAGG+AGG | 0.641487 | 3.4:-76471945 | MS.gene044186:CDS |
| CAGTTGGTATTACAAAGTAG+GGG | 0.656897 | 3.4:+76471704 | None:intergenic |
| GGTTCAGAAAGTAATTCAAG+TGG | 0.665455 | 3.4:-76471924 | MS.gene044186:CDS |
| CAGGTGTGGATGTGGATCAG+AGG | 0.671722 | 3.4:-76472498 | MS.gene044186:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATACACACATAAATTA+TGG | + | chr3.4:76471831-76471850 | None:intergenic | 15.0% |
| !! | ACACATAAATTATGGTAAAA+AGG | + | chr3.4:76471823-76471842 | None:intergenic | 20.0% |
| !! | CACATAAATTATGGTAAAAA+GGG | + | chr3.4:76471822-76471841 | None:intergenic | 20.0% |
| !! | TAATTACTTATACATACCTT+TGG | + | chr3.4:76471771-76471790 | None:intergenic | 20.0% |
| !!! | AATTTATGTGTGTATTTTTG+TGG | - | chr3.4:76471832-76471851 | MS.gene044186:CDS | 20.0% |
| ! | AAAGAACCATTGAAACATAT+AGG | + | chr3.4:76472514-76472533 | None:intergenic | 25.0% |
| ! | AACCTTAAGAACATCAAAAT+TGG | + | chr3.4:76472201-76472220 | None:intergenic | 25.0% |
| ! | ATAATCTCTTTCCAATTGTT+TGG | + | chr3.4:76472165-76472184 | None:intergenic | 25.0% |
| ! | GTTCATTATTATGATTCAAG+AGG | - | chr3.4:76472556-76472575 | MS.gene044186:intron | 25.0% |
| ! | TCAGAATCAATTTATGAGAA+TGG | - | chr3.4:76472597-76472616 | MS.gene044186:intron | 25.0% |
| !!! | TTTAGAAAAGAGCTTTGAAT+TGG | - | chr3.4:76472034-76472053 | MS.gene044186:intron | 25.0% |
| AACCAAATTGAAACTTGTCT+AGG | + | chr3.4:76472116-76472135 | None:intergenic | 30.0% | |
| AACCTAGACAAGTTTCAATT+TGG | - | chr3.4:76472111-76472130 | MS.gene044186:intron | 30.0% | |
| ACCAAATTCATCATTGAACT+TGG | + | chr3.4:76472538-76472557 | None:intergenic | 30.0% | |
| ACTTATACATACCTTTGGAT+TGG | + | chr3.4:76471766-76471785 | None:intergenic | 30.0% | |
| CTTTCTATACCTCTTGAAAT+TGG | + | chr3.4:76472433-76472452 | None:intergenic | 30.0% | |
| GAATCAATTTATGAGAATGG+AGG | - | chr3.4:76472600-76472619 | MS.gene044186:intron | 30.0% | |
| GATTCTCCTATATGTTTCAA+TGG | - | chr3.4:76472505-76472524 | MS.gene044186:intron | 30.0% | |
| GTTCAATAACTCAGAAACTA+TGG | - | chr3.4:76471721-76471740 | MS.gene044186:CDS | 30.0% | |
| TAATTCAAGTGGTGTGATTA+AGG | - | chr3.4:76472468-76472487 | MS.gene044186:CDS | 30.0% | |
| TTGAAGTTAGCTGAAGAATT+AGG | - | chr3.4:76472083-76472102 | MS.gene044186:intron | 30.0% | |
| ! | ATTTCAAGAGGTATAGAAAG+AGG | - | chr3.4:76472433-76472452 | MS.gene044186:CDS | 30.0% |
| !! | GTCCAATTTTGATGTTCTTA+AGG | - | chr3.4:76472196-76472215 | MS.gene044186:CDS | 30.0% |
| ACGAACGAAAACCAAACAAT+TGG | - | chr3.4:76472151-76472170 | MS.gene044186:CDS | 35.0% | |
| CAAGAAGATAGCTATGAAGA+TGG | - | chr3.4:76471960-76471979 | MS.gene044186:CDS | 35.0% | |
| GAATGAGACTCTTACTAGAA+AGG | - | chr3.4:76472244-76472263 | MS.gene044186:CDS | 35.0% | |
| GCCAAGTTCAATGATGAATT+TGG | - | chr3.4:76472534-76472553 | MS.gene044186:intron | 35.0% | |
| GGTTCAGAAAGTAATTCAAG+TGG | - | chr3.4:76472457-76472476 | MS.gene044186:CDS | 35.0% | |
| GTAGAATGTCCAATTTCAAG+AGG | - | chr3.4:76472421-76472440 | MS.gene044186:CDS | 35.0% | |
| GTTTCATTCTTTGCAAATGC+AGG | - | chr3.4:76471864-76471883 | MS.gene044186:CDS | 35.0% | |
| TGAAGATGGTAGTTCAATGT+TGG | - | chr3.4:76471974-76471993 | MS.gene044186:CDS | 35.0% | |
| TTGGAGAAGAAAAGAAGACT+TGG | - | chr3.4:76471993-76472012 | MS.gene044186:CDS | 35.0% | |
| ! | GCTAACTTCAATTTTCTCTC+TGG | + | chr3.4:76472074-76472093 | None:intergenic | 35.0% |
| ATTCTTTGCAAATGCAGGTG+TGG | - | chr3.4:76471869-76471888 | MS.gene044186:CDS | 40.0% | |
| CTTTCCATGTACCAATCCAA+AGG | - | chr3.4:76471752-76471771 | MS.gene044186:CDS | 40.0% | |
| CTTTGAATTGGACAACAAGC+TGG | - | chr3.4:76472046-76472065 | MS.gene044186:intron | 40.0% | |
| GATCAGAGGAATGAGACAAA+AGG | - | chr3.4:76471897-76471916 | MS.gene044186:CDS | 40.0% | |
| ! | TCAAGAGGTATAGAAAGAGG+AGG | - | chr3.4:76472436-76472455 | MS.gene044186:CDS | 40.0% |
| !! | CATACCTTTGGATTGGTACA+TGG | + | chr3.4:76471759-76471778 | None:intergenic | 40.0% |
| TGCAAATGCAGGTGTGGATG+TGG | - | chr3.4:76471875-76471894 | MS.gene044186:CDS | 50.0% | |
| ! | TCGTTCGTGCTCGACGATTT+TGG | + | chr3.4:76472139-76472158 | None:intergenic | 50.0% |
| CAGGTGTGGATGTGGATCAG+AGG | - | chr3.4:76471883-76471902 | MS.gene044186:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 76471713 | 76472690 | 76471713 | ID=MS.gene044186 |
| chr3.4 | mRNA | 76471713 | 76472690 | 76471713 | ID=MS.gene044186.t1;Parent=MS.gene044186 |
| chr3.4 | exon | 76472630 | 76472690 | 76472630 | ID=MS.gene044186.t1.exon1;Parent=MS.gene044186.t1 |
| chr3.4 | CDS | 76472630 | 76472690 | 76472630 | ID=cds.MS.gene044186.t1;Parent=MS.gene044186.t1 |
| chr3.4 | exon | 76472138 | 76472517 | 76472138 | ID=MS.gene044186.t1.exon2;Parent=MS.gene044186.t1 |
| chr3.4 | CDS | 76472138 | 76472517 | 76472138 | ID=cds.MS.gene044186.t1;Parent=MS.gene044186.t1 |
| chr3.4 | exon | 76471713 | 76472039 | 76471713 | ID=MS.gene044186.t1.exon3;Parent=MS.gene044186.t1 |
| chr3.4 | CDS | 76471713 | 76472039 | 76471713 | ID=cds.MS.gene044186.t1;Parent=MS.gene044186.t1 |
| Gene Sequence |
| Protein sequence |
