AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene044208

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene044208.t1 MTR_7g446060 71.429 91 26 0 428 518 2 92 4.34e-39 142
MS.gene044208.t1 MTR_6g051425 33.333 273 173 4 353 616 19 291 3.18e-38 146
MS.gene044208.t1 MTR_7g031620 79.268 82 17 0 356 437 1 82 1.07e-34 127
MS.gene044208.t1 MTR_5g023310 41.401 157 25 2 482 638 16 105 7.88e-30 114
MS.gene044208.t1 MTR_2g090105 44.785 163 59 5 929 1085 16 153 2.49e-27 110
MS.gene044208.t1 MTR_0558s0020 28.682 258 156 7 356 587 41 296 1.87e-24 105
MS.gene044208.t1 MTR_4g035820 30.769 273 170 9 333 591 57 324 1.97e-24 110
MS.gene044208.t1 MTR_0856s0010 37.008 127 79 1 351 476 34 160 2.53e-19 86.7
MS.gene044208.t1 MTR_8g446020 26.891 238 147 6 356 587 40 256 4.37e-19 88.6
MS.gene044208.t1 MTR_1g008290 37.984 129 77 2 415 543 19 144 1.80e-17 80.9
MS.gene044208.t1 MTR_1g070355 28.870 239 147 9 357 581 80 309 6.36e-16 82.8
MS.gene044208.t1 MTR_6g090505 28.333 180 123 3 411 586 53 230 1.20e-15 80.5
MS.gene044208.t1 MTR_1g083640 26.201 229 141 7 356 558 56 282 1.25e-15 79.3
MS.gene044208.t1 MTR_6g022070 28.767 146 100 1 641 786 1 142 6.75e-15 77.8
MS.gene044208.t1 MTR_7g446480 31.515 165 110 2 433 595 151 314 5.28e-14 74.7
MS.gene044208.t1 MTR_7g446510 30.909 165 111 2 433 595 166 329 1.77e-13 73.6
MS.gene044208.t1 MTR_1g013060 29.187 209 133 6 351 547 24 229 1.87e-13 71.6
MS.gene044208.t1 MTR_8g465780 31.579 114 72 2 717 829 1 109 4.94e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene044208.t1 AT4G15090 31.030 738 469 11 351 1081 51 755 2.42e-120 390
MS.gene044208.t1 AT4G15090 31.030 738 469 11 351 1081 51 755 2.42e-120 390
MS.gene044208.t1 AT4G15090 31.030 738 469 11 351 1081 51 755 2.42e-120 390
MS.gene044208.t1 AT4G15090 31.030 738 469 11 351 1081 51 755 2.42e-120 390
MS.gene044208.t1 AT4G15090 31.030 738 469 11 351 1081 51 755 2.42e-120 390
MS.gene044208.t1 AT1G76320 36.602 571 326 11 357 915 3 549 2.67e-111 361
MS.gene044208.t1 AT1G76320 31.537 761 462 17 357 1094 3 727 4.38e-111 363
MS.gene044208.t1 AT1G76320 31.537 761 462 17 357 1094 3 727 4.38e-111 363
MS.gene044208.t1 AT1G76320 32.016 759 459 18 357 1094 3 725 5.33e-111 362
MS.gene044208.t1 AT4G38180 35.253 573 347 10 351 910 73 634 1.22e-110 363
MS.gene044208.t1 AT1G52520 34.506 597 366 14 326 913 61 641 3.07e-108 354
MS.gene044208.t1 AT3G22170 34.251 581 335 9 351 913 70 621 1.21e-107 357
MS.gene044208.t1 AT3G22170 34.251 581 335 9 351 913 70 621 1.21e-107 357
MS.gene044208.t1 AT1G80010 33.102 577 361 13 351 911 95 662 1.70e-97 326
MS.gene044208.t1 AT4G19990 33.846 585 320 13 354 915 24 564 5.71e-92 311
MS.gene044208.t1 AT4G19990 33.846 585 320 13 354 915 24 564 5.71e-92 311
MS.gene044208.t1 AT4G19990 33.846 585 320 13 354 915 24 564 6.36e-92 311
MS.gene044208.t1 AT4G19990 33.846 585 320 13 354 915 38 578 1.14e-91 311
MS.gene044208.t1 AT4G19990 33.846 585 320 13 354 915 24 564 1.18e-91 311
MS.gene044208.t1 AT4G19990 33.846 585 320 13 354 915 24 564 1.18e-91 311
MS.gene044208.t1 AT4G19990 34.851 505 279 9 417 915 47 507 1.58e-86 295
MS.gene044208.t1 AT2G27110 31.633 588 355 12 332 910 30 579 9.38e-84 291
MS.gene044208.t1 AT2G27110 31.633 588 355 12 332 910 30 579 9.38e-84 291
MS.gene044208.t1 AT2G32250 34.396 439 273 6 527 962 176 602 3.41e-81 281
MS.gene044208.t1 AT2G32250 34.396 439 273 6 527 962 135 561 4.19e-81 281
MS.gene044208.t1 AT2G32250 34.396 439 273 6 527 962 135 561 5.16e-81 281
MS.gene044208.t1 AT2G32250 34.396 439 273 6 527 962 176 602 5.45e-81 282
MS.gene044208.t1 AT2G32250 34.396 439 273 6 527 962 176 602 5.45e-81 282
MS.gene044208.t1 AT2G32250 34.396 439 273 6 527 962 176 602 6.62e-81 282
MS.gene044208.t1 AT2G32250 34.396 439 273 6 527 962 176 602 6.62e-81 282
MS.gene044208.t1 AT2G32250 34.396 439 273 6 527 962 176 602 6.62e-81 282
MS.gene044208.t1 AT2G27110 34.921 441 262 9 475 910 14 434 1.80e-79 275
MS.gene044208.t1 AT3G06250 30.069 582 350 12 331 908 174 702 5.87e-76 267
MS.gene044208.t1 AT3G06250 30.069 582 350 12 331 908 174 702 5.87e-76 267
MS.gene044208.t1 AT3G06250 30.069 582 350 12 331 908 174 702 5.87e-76 267
MS.gene044208.t1 AT4G38170 33.981 412 254 8 516 922 13 411 3.49e-75 259
MS.gene044208.t1 AT5G18960 31.053 570 333 14 348 908 208 726 1.90e-74 263
MS.gene044208.t1 AT5G18960 31.053 570 333 14 348 908 208 726 1.90e-74 263
MS.gene044208.t1 AT1G10240 27.750 609 363 21 337 907 35 604 7.92e-64 230
MS.gene044208.t1 AT1G10240 27.750 609 363 21 337 907 35 604 7.92e-64 230
MS.gene044208.t1 AT5G28530 25.484 620 402 20 321 908 24 615 5.45e-48 183
MS.gene044208.t1 AT5G28530 25.484 620 402 20 321 908 24 615 5.45e-48 183
MS.gene044208.t1 AT5G28530 25.481 624 401 21 321 908 24 619 2.59e-47 181
MS.gene044208.t1 AT5G28530 27.385 325 203 12 593 908 252 552 1.91e-26 116
MS.gene044208.t1 AT5G28530 27.356 329 202 13 593 908 252 556 9.31e-26 114

Find 166 sgRNAs with CRISPR-Local

Find 390 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCATTGGTGAATGCTTTC+TGG 0.174694 3.3:+67775560 None:intergenic
CCATCTTCTTCTATAATTTC+AGG 0.175398 3.3:+67775046 None:intergenic
CATATGTGAGAGACACATTT+TGG 0.184902 3.3:-67775786 MS.gene044208:CDS
TATCAAAACCACATTTAATA+AGG 0.185554 3.3:+67775224 None:intergenic
CTAAAATAGCGTGCTTTGTT+AGG 0.188876 3.3:+67776618 None:intergenic
TCATATACTTCAGGTGAATT+TGG 0.200805 3.3:-67780715 MS.gene044208:CDS
TCACTCATAAGTATTGAATT+TGG 0.202186 3.3:+67774554 None:intergenic
CAACCTCCACTTGAAATTCT+TGG 0.215469 3.3:+67775533 None:intergenic
TCACCTTCATGAACACTATT+TGG 0.220831 3.3:+67776942 None:intergenic
GTCGTTTACGGAATGTATTT+TGG 0.226868 3.3:-67776323 MS.gene044208:CDS
AAGGAAAACATGGCTGATTT+TGG 0.228183 3.3:-67775637 MS.gene044208:CDS
GTAACACTCAATAACTTTCT+TGG 0.229050 3.3:+67780978 None:intergenic
CACCATCGATGGCGAGCTTT+TGG 0.238537 3.3:+67776018 None:intergenic
TTTGAGTAAAAGTGATTTCA+TGG 0.249102 3.3:-67775899 MS.gene044208:CDS
TGGCCTTGGGGAGGTTAATT+TGG 0.251395 3.3:-67780653 MS.gene044208:CDS
GAGGGCTTCCAGAACCGTTT+TGG 0.254599 3.3:-67779878 MS.gene044208:CDS
ATAGCTTGTGTAAGTCATTT+TGG 0.262515 3.3:-67775598 MS.gene044208:CDS
CGTAGAAGCAACTTCGTAAA+AGG 0.287052 3.3:+67775153 None:intergenic
TGATCAATTATTATGGCATT+TGG 0.287902 3.3:+67776078 None:intergenic
GTTAATTGTTTGTTGTTAGA+TGG 0.293782 3.3:-67779900 MS.gene044208:CDS
CTTTGTGTGCTTAAGCTAAC+AGG 0.298887 3.3:-67775316 MS.gene044208:CDS
TATGCCCGGTCTATAGGTTT+TGG 0.300318 3.3:-67776858 MS.gene044208:CDS
GTCTCCGCACTTTATCTATA+TGG 0.324818 3.3:+67776448 None:intergenic
TGGTGAATGCTTTCTGGAAT+TGG 0.326923 3.3:+67775566 None:intergenic
GCTTCACCCCAAAACGGTTC+TGG 0.327465 3.3:+67779870 None:intergenic
AGGGCTGCATATGAATATTT+TGG 0.330794 3.3:-67776285 MS.gene044208:CDS
AAGTGCGGAGACTGCGACTT+GGG 0.331491 3.3:-67776437 MS.gene044208:CDS
TCTTGGAATTACTTCTGCTT+TGG 0.339662 3.3:+67780995 None:intergenic
TGTTAAAGTGTGTTGGCCTT+GGG 0.343407 3.3:-67780666 MS.gene044208:CDS
TTTGTGGCATATAATGAAAA+AGG 0.344495 3.3:-67775995 MS.gene044208:CDS
AGTATGAACTCATTCTTTGA+TGG 0.348820 3.3:-67775733 MS.gene044208:CDS
CTCAGAGTCTTTCTCATTGA+AGG 0.353579 3.3:+67775393 None:intergenic
CACAGTGGAGGAAGGATATA+AGG 0.358221 3.3:-67775258 MS.gene044208:CDS
AAGAGTTATGCCCGGTCTAT+AGG 0.361091 3.3:-67776864 MS.gene044208:CDS
TTGATGATAAAAGTCGTTTA+CGG 0.363632 3.3:-67776335 MS.gene044208:CDS
ATGAAGTACCAGAGATGATT+TGG 0.363678 3.3:-67779794 MS.gene044208:CDS
GTGTTAAAGTGTGTTGGCCT+TGG 0.371561 3.3:-67780667 MS.gene044208:CDS
TTTGATGATTTCCACTTCCT+TGG 0.375605 3.3:+67774885 None:intergenic
ATTGTCTTGATCAATTATTA+TGG 0.376901 3.3:+67776071 None:intergenic
ACTTATGAGTGAAGTATATC+AGG 0.377433 3.3:-67774543 MS.gene044208:CDS
AGCAAATTCAACCTGATGTC+TGG 0.377447 3.3:+67780583 None:intergenic
CTTCAGCACATGTCACTTCC+AGG 0.385799 3.3:-67780753 MS.gene044208:CDS
TCATGCTTGCTTTGATAGAT+TGG 0.388712 3.3:-67775494 MS.gene044208:CDS
ATCAAAACCACATTTAATAA+GGG 0.391774 3.3:+67775225 None:intergenic
CATCTTCTTCTATAATTTCA+GGG 0.405722 3.3:+67775047 None:intergenic
TGAACGGACGAATAAAATAT+TGG 0.406831 3.3:-67779931 MS.gene044208:CDS
AAGGGCGTCCTCCTTCAAAA+AGG 0.415773 3.3:-67774970 MS.gene044208:CDS
GAATATGACATTTGGTGAAA+AGG 0.417591 3.3:-67776481 MS.gene044208:CDS
CCTTTACTTCGAGTCGGTAC+AGG 0.430467 3.3:+67774989 None:intergenic
ACCACTATCAATCACCCAAC+TGG 0.433612 3.3:+67780777 None:intergenic
CTCTGGTACTTCATGTTGTA+AGG 0.434298 3.3:+67779803 None:intergenic
AATTTGAGTTGTGGCATAAG+AGG 0.444330 3.3:-67780409 MS.gene044208:CDS
CATTTGGTGAAAAGGATTGT+AGG 0.444493 3.3:-67776473 MS.gene044208:CDS
TAAAATAGCGTGCTTTGTTA+GGG 0.448123 3.3:+67776619 None:intergenic
AAAGTGATTTCATGGAAAAG+TGG 0.450883 3.3:-67775891 MS.gene044208:CDS
AAGTATTGAATTTGGATTGA+AGG 0.452798 3.3:+67774562 None:intergenic
CTCGCCATCGATGGTGTTTG+TGG 0.452930 3.3:-67776011 MS.gene044208:CDS
ATTTGATGAAAGAAATCGTT+GGG 0.454237 3.3:-67775815 MS.gene044208:CDS
CCATGGTCAATCTGTGTTGT+TGG 0.460551 3.3:-67776184 MS.gene044208:CDS
AATTAAAGACATAGTGTTTG+AGG 0.465732 3.3:-67775419 MS.gene044208:CDS
CATGGTCAATCTGTGTTGTT+GGG 0.466450 3.3:-67776183 MS.gene044208:CDS
CTAAATATAGTTCCAACCTT+AGG 0.468412 3.3:+67776915 None:intergenic
GTGTTACAATTGTGGTAGAA+AGG 0.471384 3.3:-67780962 MS.gene044208:CDS
ACTCCAACAAAAGGAGCAAA+TGG 0.472118 3.3:+67776213 None:intergenic
AAGTGCATATGCATAGATAA+TGG 0.473507 3.3:-67780038 MS.gene044208:CDS
CCACTGTGAGAAAATATAAG+AGG 0.477523 3.3:+67775273 None:intergenic
TGTTACAATTGTGGTAGAAA+GGG 0.477990 3.3:-67780961 MS.gene044208:CDS
TGAAGCATGTTCCAGACATC+AGG 0.479212 3.3:-67780594 MS.gene044208:CDS
GAGAGTTAACTTTGCCCCAT+TGG 0.479351 3.3:+67780624 None:intergenic
TTTGGGCAGATGCGAGATGT+AGG 0.483477 3.3:-67776305 MS.gene044208:CDS
AGTATTGAATTTGGATTGAA+GGG 0.484124 3.3:+67774563 None:intergenic
TTGGCTGTTCACAACATGGT+TGG 0.487761 3.3:-67776121 MS.gene044208:CDS
CCTGAAATTATAGAAGAAGA+TGG 0.488011 3.3:-67775046 MS.gene044208:CDS
GGTCTCTATTACCTGAATAC+CGG 0.493285 3.3:+67781016 None:intergenic
CGGAGACTGCGACTTGGGGT+TGG 0.494185 3.3:-67776432 MS.gene044208:CDS
GTTCAAGTAGTTGATAAAGT+TGG 0.495312 3.3:-67774751 MS.gene044208:CDS
GTTATTGAGTGTTACAATTG+TGG 0.495734 3.3:-67780970 MS.gene044208:CDS
AATTGTTTGTTGTTAGATGG+AGG 0.496326 3.3:-67779897 MS.gene044208:CDS
ATTGTTTGTTGTTAGATGGA+GGG 0.498483 3.3:-67779896 MS.gene044208:CDS
CTGTACCGACTCGAAGTAAA+GGG 0.498649 3.3:-67774988 MS.gene044208:CDS
AATGCATGTATTTCTTTAGA+CGG 0.501759 3.3:-67776690 MS.gene044208:CDS
TAGTCAATTCTATTATGTAA+TGG 0.502912 3.3:-67776361 MS.gene044208:CDS
CAGGTTGAATTTGCTTTCTG+TGG 0.503055 3.3:-67780575 MS.gene044208:CDS
CTATAGTTGTTGAAGCGAAT+GGG 0.503159 3.3:-67776509 MS.gene044208:CDS
CATTCAATCTAGCCTTGCAC+TGG 0.503380 3.3:+67776709 None:intergenic
TTACCTGACCAAATCATCTC+TGG 0.505750 3.3:+67779786 None:intergenic
AAGTGATTTCATGGAAAAGT+GGG 0.506412 3.3:-67775890 MS.gene044208:CDS
TCTATAGTTGTTGAAGCGAA+TGG 0.507984 3.3:-67776510 MS.gene044208:CDS
CCTGTACCGACTCGAAGTAA+AGG 0.509102 3.3:-67774989 MS.gene044208:CDS
GTTAATTTGGAGATGTCCAA+TGG 0.509607 3.3:-67780640 MS.gene044208:CDS
AATGTGTCTCTCACATATGC+AGG 0.509862 3.3:+67775790 None:intergenic
GAGAATGAGGACAAAGGTAA+AGG 0.511299 3.3:-67780904 MS.gene044208:CDS
GTGGCTAAGCTATGCGATGA+AGG 0.513695 3.3:-67780556 MS.gene044208:intron
GCTTGCTTTGATAGATTGGA+AGG 0.517556 3.3:-67775490 MS.gene044208:CDS
GAGGACAAAGGTAAAGGTAA+AGG 0.524087 3.3:-67780898 MS.gene044208:CDS
TGGTGATTTACTCCAACAAA+AGG 0.525957 3.3:+67776204 None:intergenic
TCAGGATAACGAATGGTTGA+AGG 0.526171 3.3:-67775842 MS.gene044208:CDS
TGGATCCTCGTTTGAAAAGG+AGG 0.528466 3.3:-67776581 MS.gene044208:CDS
GGGTATGAGAATATGACATT+TGG 0.528947 3.3:-67776489 MS.gene044208:CDS
GTACCAGAGATGATTTGGTC+AGG 0.530113 3.3:-67779789 MS.gene044208:intron
TTCCAAAAGCTCGCCATCGA+TGG 0.531681 3.3:-67776020 MS.gene044208:CDS
TGAATTTGGTGATGTGAAGT+TGG 0.532116 3.3:-67780701 MS.gene044208:CDS
CTCAATGCTTCACCCCAAAA+CGG 0.533436 3.3:+67779864 None:intergenic
TCCAGTTGGGTGATTGATAG+TGG 0.534553 3.3:-67780778 MS.gene044208:CDS
TTGGGCAGATGCGAGATGTA+GGG 0.538615 3.3:-67776304 MS.gene044208:CDS
GAACCAAATAGTGTTCATGA+AGG 0.541566 3.3:-67776945 MS.gene044208:CDS
TTAATTTGGAGATGTCCAAT+GGG 0.546864 3.3:-67780639 MS.gene044208:CDS
TGTTGTGAACAGCCAAGTAA+AGG 0.547394 3.3:+67776128 None:intergenic
TAACTCCAAAACCTATAGAC+CGG 0.548272 3.3:+67776853 None:intergenic
AGGATACTAAGACCTTTACT+TGG 0.548532 3.3:-67776140 MS.gene044208:CDS
CAGGATAACGAATGGTTGAA+GGG 0.548682 3.3:-67775841 MS.gene044208:CDS
GAAGGTGAAATACCTAAGGT+TGG 0.549664 3.3:-67776927 MS.gene044208:CDS
GAAGGAAATAATAGATGTGA+TGG 0.552319 3.3:-67776975 MS.gene044208:CDS
AGGCATACCCTTATTAAATG+TGG 0.553411 3.3:-67775232 MS.gene044208:CDS
TGATCACATTTCTTCAAGTG+TGG 0.553485 3.3:+67780317 None:intergenic
TTACTTGGCTGTTCACAACA+TGG 0.555090 3.3:-67776125 MS.gene044208:CDS
ATTCCAAGAATTTCAAGTGG+AGG 0.555252 3.3:-67775536 MS.gene044208:CDS
TTCAGGGCATGTTTCTTGAG+AGG 0.556231 3.3:+67775063 None:intergenic
ATTGAAAGATAAAGTTGAGA+AGG 0.561801 3.3:-67775656 MS.gene044208:CDS
CTTTACTTCGAGTCGGTACA+GGG 0.564479 3.3:+67774990 None:intergenic
CAGCTGAGAAATTTGAGTTG+TGG 0.566055 3.3:-67780418 MS.gene044208:CDS
TTAGAACTCAATGATCAAGC+TGG 0.567016 3.3:-67776558 MS.gene044208:CDS
TGTTGATAGTGCATCCAGTT+GGG 0.575562 3.3:-67780791 MS.gene044208:CDS
AAAGTGCGGAGACTGCGACT+TGG 0.575984 3.3:-67776438 MS.gene044208:CDS
TTAAACTTCAGGATAACGAA+TGG 0.581469 3.3:-67775849 MS.gene044208:CDS
TGGGGCAAAGTTAACTCTCA+AGG 0.581831 3.3:-67780620 MS.gene044208:CDS
TCGCTTCAACAACTATAGAT+CGG 0.588019 3.3:+67776514 None:intergenic
AGAACTTGATTAGATATCAG+AGG 0.591558 3.3:-67779977 MS.gene044208:CDS
ACATGGTTGGAATGCATGCA+TGG 0.592737 3.3:-67776108 MS.gene044208:CDS
TCATGAAGGTGAAATACCTA+AGG 0.597318 3.3:-67776931 MS.gene044208:CDS
GTTAAAGTGTGTTGGCCTTG+GGG 0.603222 3.3:-67780665 MS.gene044208:CDS
TATTTGATGAAAGAAATCGT+TGG 0.605775 3.3:-67775816 MS.gene044208:CDS
ATGAAAGAAGAAGATTCAGA+TGG 0.607061 3.3:-67780871 MS.gene044208:CDS
AAAGAAGAAGATTCAGATGG+TGG 0.607381 3.3:-67780868 MS.gene044208:CDS
TTGTTGATAGTGCATCCAGT+TGG 0.615560 3.3:-67780792 MS.gene044208:CDS
AACTCCAAAACCTATAGACC+GGG 0.618933 3.3:+67776854 None:intergenic
AAAGTGTGTTGGCCTTGGGG+AGG 0.621486 3.3:-67780662 MS.gene044208:CDS
ACGGACGAATAAAATATTGG+CGG 0.623690 3.3:-67779928 MS.gene044208:CDS
GAAGGTGTGTTAAAGTGTGT+TGG 0.623829 3.3:-67780673 MS.gene044208:CDS
CTGTTAGCTTAAGCACACAA+AGG 0.625605 3.3:+67775317 None:intergenic
AGTATTACAAGAGTTATGCC+CGG 0.630025 3.3:-67776872 MS.gene044208:CDS
AGTGCGGAGACTGCGACTTG+GGG 0.633117 3.3:-67776436 MS.gene044208:CDS
TAAAGTTGAGAAGGAAAACA+TGG 0.634633 3.3:-67775647 MS.gene044208:CDS
GTTACAATTGTGGTAGAAAG+GGG 0.635399 3.3:-67780960 MS.gene044208:CDS
GATGTGAAGTTGGCTCATGA+AGG 0.636683 3.3:-67780691 MS.gene044208:CDS
TATGCCACAAACACCATCGA+TGG 0.638359 3.3:+67776007 None:intergenic
TTTACTCTAGCATGTAGTCG+TGG 0.642195 3.3:-67776789 MS.gene044208:CDS
AAAATTCCAAGAATTTCAAG+TGG 0.644675 3.3:-67775539 MS.gene044208:CDS
ACTTGGGGTTGGAGATGCTG+AGG 0.644897 3.3:-67776421 MS.gene044208:CDS
AAATCATCAAAGTCAACAAG+AGG 0.645487 3.3:-67774873 MS.gene044208:intron
GGAGGAAGGATATAAGGCGA+AGG 0.647816 3.3:-67775252 MS.gene044208:CDS
AGGATAACGAATGGTTGAAG+GGG 0.650586 3.3:-67775840 MS.gene044208:CDS
TGTGAGAAAATATAAGAGGA+CGG 0.656653 3.3:+67775277 None:intergenic
TTTGTTGGAGTAAATCACCA+TGG 0.661689 3.3:-67776201 MS.gene044208:CDS
CTTGCAATTTAGATGCACAC+AGG 0.664144 3.3:+67774779 None:intergenic
TTTAGGAGGAATGAACATGG+TGG 0.670141 3.3:-67774602 MS.gene044208:CDS
ATGTGCTTTACTGTCAAGCG+AGG 0.675011 3.3:-67776160 MS.gene044208:CDS
CCAACAACACAGATTGACCA+TGG 0.675112 3.3:+67776184 None:intergenic
GGACGCCCTTTACTTCGAGT+CGG 0.676619 3.3:+67774983 None:intergenic
TGCATATGCATAGATAATGG+AGG 0.683642 3.3:-67780035 MS.gene044208:CDS
GATGAAGAGGAAATCAACGA+AGG 0.688631 3.3:-67776993 MS.gene044208:CDS
TCTCCAAATTAACCTCCCCA+AGG 0.692066 3.3:+67780650 None:intergenic
GGAACCATATAGATAAAGTG+CGG 0.699737 3.3:-67776452 MS.gene044208:CDS
TCATGTTGTAAGGACACACA+TGG 0.721005 3.3:+67779813 None:intergenic
TAATTTGGAGATGTCCAATG+GGG 0.732923 3.3:-67780638 MS.gene044208:CDS
TCACATGAGTGAGAAAGACA+TGG 0.752578 3.3:-67780381 MS.gene044208:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAAATAAAATTATTTTT+TGG - chr3.3:67777367-67777386 MS.gene044208:intron 0.0%
!!! AAAAAATAAAATTAATTTTA+TGG + chr3.3:67777107-67777126 None:intergenic 0.0%
!!! AAAAATAATTTTATTTTTTT+TGG + chr3.3:67777367-67777386 None:intergenic 0.0%
!!! AATATAAGAATTTTTTTAGT+AGG + chr3.3:67777485-67777504 None:intergenic 10.0%
!!! ATATAAGAATTTTTTTAGTA+GGG + chr3.3:67777484-67777503 None:intergenic 10.0%
!!! ATATTTCATATATTTTGATT+TGG - chr3.3:67776508-67776527 MS.gene044208:CDS 10.0%
!!! CTAAATATTTTTTAGTAATT+TGG + chr3.3:67776251-67776270 None:intergenic 10.0%
!!! TTTTAAAAAAAATTGATATC+TGG - chr3.3:67777568-67777587 MS.gene044208:intron 10.0%
!! AAAAAGTAAATAAAACAAAC+AGG + chr3.3:67778492-67778511 None:intergenic 15.0%
!! AAAAGTAAATAAAACAAACA+GGG + chr3.3:67778491-67778510 None:intergenic 15.0%
!! AAATTAAATATCAATCACAA+AGG - chr3.3:67776046-67776065 MS.gene044208:CDS 15.0%
!! AATTTAAATATCAATCACAA+AGG - chr3.3:67775909-67775928 MS.gene044208:CDS 15.0%
!! ACTAAAAATATAAGTGATAT+AGG + chr3.3:67778450-67778469 None:intergenic 15.0%
!! CTATCAATTAATATAAGAAA+AGG - chr3.3:67777802-67777821 MS.gene044208:intron 15.0%
!! TTGATTCATTTATTAAGAAA+AGG - chr3.3:67777902-67777921 MS.gene044208:intron 15.0%
!! TTTCTTATCAAATAGTTTAA+TGG - chr3.3:67777618-67777637 MS.gene044208:intron 15.0%
!!! AGCATATATTTTTAACTTAT+TGG - chr3.3:67776104-67776123 MS.gene044208:CDS 15.0%
!!! ATTCTTATATTGATTTTGAT+AGG - chr3.3:67777494-67777513 MS.gene044208:intron 15.0%
!!! TTAACAAGATTTTCATTTTT+CGG - chr3.3:67777261-67777280 MS.gene044208:intron 15.0%
!!! TTTTAGAAGTAATAAGATTT+TGG - chr3.3:67778952-67778971 MS.gene044208:intron 15.0%
!! ATCAAAACCACATTTAATAA+GGG + chr3.3:67780331-67780350 None:intergenic 20.0%
!! ATTGTCTTGATCAATTATTA+TGG + chr3.3:67779485-67779504 None:intergenic 20.0%
!! CTAATGCAATAAATTCAAAA+AGG + chr3.3:67778517-67778536 None:intergenic 20.0%
!! TAGTCAATTCTATTATGTAA+TGG - chr3.3:67779192-67779211 MS.gene044208:intron 20.0%
!! TATCAAAACCACATTTAATA+AGG + chr3.3:67780332-67780351 None:intergenic 20.0%
!! TCCATTATAAGCTAATTTAT+CGG - chr3.3:67776312-67776331 MS.gene044208:CDS 20.0%
!! TTGTAACGTTATAAAAAGAA+AGG - chr3.3:67776906-67776925 MS.gene044208:CDS 20.0%
!!! AATATACAATCCTTTTCTTT+CGG - chr3.3:67777398-67777417 MS.gene044208:intron 20.0%
!!! AGATATGTTTTATGATGAAA+GGG - chr3.3:67777079-67777098 MS.gene044208:intron 20.0%
!!! ATTATTTTCCATTGATTGTT+TGG + chr3.3:67777727-67777746 None:intergenic 20.0%
!!! ATTTGATTTAGAAACTGATA+TGG - chr3.3:67778383-67778402 MS.gene044208:intron 20.0%
!!! ATTTTTTTTGGTACAAAAGA+GGG + chr3.3:67777355-67777374 None:intergenic 20.0%
!!! GTCTAATTTTCAATATTTGA+TGG - chr3.3:67780746-67780765 MS.gene044208:CDS 20.0%
!!! TATTTTTTTTGGTACAAAAG+AGG + chr3.3:67777356-67777375 None:intergenic 20.0%
!!! TCAATGGAAAATAATGATTT+TGG - chr3.3:67777732-67777751 MS.gene044208:intron 20.0%
!!! TGAACAAGATTTTCATTTTT+CGG - chr3.3:67777169-67777188 MS.gene044208:intron 20.0%
!!! TGATTTTGGTTCATTTAATA+CGG - chr3.3:67779930-67779949 MS.gene044208:CDS 20.0%
!!! TTGTTACATGTATGTTTTTA+GGG - chr3.3:67780915-67780934 MS.gene044208:CDS 20.0%
!!! TTTGTTACATGTATGTTTTT+AGG - chr3.3:67780914-67780933 MS.gene044208:CDS 20.0%
!!! TTTTGAATTTATTGCATTAG+TGG - chr3.3:67778517-67778536 MS.gene044208:intron 20.0%
! AAAATTCCAAGAATTTCAAG+TGG - chr3.3:67780014-67780033 MS.gene044208:CDS 25.0%
! AAATCTAAACAAACATTTCG+AGG + chr3.3:67777309-67777328 None:intergenic 25.0%
! AATGCATGTATTTCTTTAGA+CGG - chr3.3:67778863-67778882 MS.gene044208:intron 25.0%
! AATTAAAGACATAGTGTTTG+AGG - chr3.3:67780134-67780153 MS.gene044208:intron 25.0%
! ACAATATGCTACAAATCATA+CGG - chr3.3:67776597-67776616 MS.gene044208:CDS 25.0%
! ACTAAACTTAGTAGCAAAAA+TGG - chr3.3:67778722-67778741 MS.gene044208:intron 25.0%
! ATTATAAACACTCACAACTT+TGG + chr3.3:67776558-67776577 None:intergenic 25.0%
! ATTGAAAGATAAAGTTGAGA+AGG - chr3.3:67779897-67779916 MS.gene044208:CDS 25.0%
! ATTTGAACAAAAACATGAGT+TGG - chr3.3:67778070-67778089 MS.gene044208:intron 25.0%
! ATTTGATGAAAGAAATCGTT+GGG - chr3.3:67779738-67779757 MS.gene044208:intron 25.0%
! CATCTTCTTCTATAATTTCA+GGG + chr3.3:67780509-67780528 None:intergenic 25.0%
! CATTTCATTTCTTAAAGCAT+AGG - chr3.3:67776445-67776464 MS.gene044208:CDS 25.0%
! CTATAAAGACAAGAACAATA+GGG - chr3.3:67775354-67775373 MS.gene044208:CDS 25.0%
! GAGCATGTTTAAGAAATTTA+AGG - chr3.3:67775460-67775479 MS.gene044208:CDS 25.0%
! TATAAAGACAAGAACAATAG+GGG - chr3.3:67775355-67775374 MS.gene044208:CDS 25.0%
! TATTTGATGAAAGAAATCGT+TGG - chr3.3:67779737-67779756 MS.gene044208:intron 25.0%
! TGAATAAACTTGCAAAAAAG+AGG - chr3.3:67780631-67780650 MS.gene044208:CDS 25.0%
! TGATCAATTATTATGGCATT+TGG + chr3.3:67779478-67779497 None:intergenic 25.0%
! TTTAGACTTAATCGTATAGT+CGG - chr3.3:67776266-67776285 MS.gene044208:CDS 25.0%
! TTTGAGTAAAAGTGATTTCA+TGG - chr3.3:67779654-67779673 MS.gene044208:intron 25.0%
! TTTGTGGCATATAATGAAAA+AGG - chr3.3:67779558-67779577 MS.gene044208:intron 25.0%
!! AAATTCTTGGAATTTTGCAT+TGG + chr3.3:67780010-67780029 None:intergenic 25.0%
!! ACCGATAAATTAGCTTATAA+TGG + chr3.3:67776316-67776335 None:intergenic 25.0%
!! AGATTATTTGTTAGATTTCG+TGG + chr3.3:67776763-67776782 None:intergenic 25.0%
!! AGATTTGTAGTTTTCTTCTT+GGG - chr3.3:67777323-67777342 MS.gene044208:intron 25.0%
!! AGTATTGAATTTGGATTGAA+GGG + chr3.3:67780993-67781012 None:intergenic 25.0%
!! ATTATTTGTTAGATTTCGTG+GGG + chr3.3:67776761-67776780 None:intergenic 25.0%
!! ATTTTGTTGGGATTTGAAAA+AGG - chr3.3:67774627-67774646 MS.gene044208:intron 25.0%
!! GAGATATGTTTTATGATGAA+AGG - chr3.3:67777078-67777097 MS.gene044208:intron 25.0%
!! GATTATTTGTTAGATTTCGT+GGG + chr3.3:67776762-67776781 None:intergenic 25.0%
!! GATTGAAGATTTTAAACTTC+AGG - chr3.3:67779693-67779712 MS.gene044208:intron 25.0%
!! TAGATTTGTAGTTTTCTTCT+TGG - chr3.3:67777322-67777341 MS.gene044208:intron 25.0%
!! TTGATGATAAAAGTCGTTTA+CGG - chr3.3:67779218-67779237 MS.gene044208:intron 25.0%
!!! AACATCATTTTTACTCTTCA+AGG + chr3.3:67775438-67775457 None:intergenic 25.0%
!!! AAGTATTGAATTTGGATTGA+AGG + chr3.3:67780994-67781013 None:intergenic 25.0%
!!! AATGTTTTTTTTATCCCTTC+TGG + chr3.3:67776223-67776242 None:intergenic 25.0%
!!! AATTTTCAATATTTGATGGC+AGG - chr3.3:67780750-67780769 MS.gene044208:CDS 25.0%
!!! AGTTTTACGGATTTAGTTTA+GGG + chr3.3:67778125-67778144 None:intergenic 25.0%
!!! GTTAATTGTTTGTTGTTAGA+TGG - chr3.3:67775653-67775672 MS.gene044208:CDS 25.0%
!!! TCACTCATAAGTATTGAATT+TGG + chr3.3:67781002-67781021 None:intergenic 25.0%
!!! TGTGGTTTTGATAATTTAGT+TGG - chr3.3:67780339-67780358 MS.gene044208:CDS 25.0%
!!! TGTTACATGTATGTTTTTAG+GGG - chr3.3:67780916-67780935 MS.gene044208:CDS 25.0%
AAAGCTGATAGAAAACCATA+TGG - chr3.3:67776364-67776383 MS.gene044208:CDS 30.0%
AAAGTGATTTCATGGAAAAG+TGG - chr3.3:67779662-67779681 MS.gene044208:intron 30.0%
AAATCATCAAAGTCAACAAG+AGG - chr3.3:67780680-67780699 MS.gene044208:CDS 30.0%
AAGACCAGAAATTCTTGATT+TGG - chr3.3:67775310-67775329 MS.gene044208:CDS 30.0%
AAGTGATTTCATGGAAAAGT+GGG - chr3.3:67779663-67779682 MS.gene044208:intron 30.0%
AAGTGCATATGCATAGATAA+TGG - chr3.3:67775515-67775534 MS.gene044208:CDS 30.0%
ACAACAAAAGAATGTTCGAA+GGG - chr3.3:67776820-67776839 MS.gene044208:CDS 30.0%
ACTTATGAGTGAAGTATATC+AGG - chr3.3:67781010-67781029 MS.gene044208:CDS 30.0%
AGAACTTGATTAGATATCAG+AGG - chr3.3:67775576-67775595 MS.gene044208:CDS 30.0%
AGTATGAACTCATTCTTTGA+TGG - chr3.3:67779820-67779839 MS.gene044208:CDS 30.0%
ATAAAGACAAGAACAATAGG+GGG - chr3.3:67775356-67775375 MS.gene044208:CDS 30.0%
ATAAATGGGAGTCATGAAAT+GGG - chr3.3:67777053-67777072 MS.gene044208:intron 30.0%
ATCGAACATATGTGTTAAAG+AGG - chr3.3:67776419-67776438 MS.gene044208:CDS 30.0%
ATGAAAGAAGAAGATTCAGA+TGG - chr3.3:67774682-67774701 MS.gene044208:intron 30.0%
CCATCTTCTTCTATAATTTC+AGG + chr3.3:67780510-67780529 None:intergenic 30.0%
CCTATAAAGACAAGAACAAT+AGG - chr3.3:67775353-67775372 MS.gene044208:CDS 30.0%
CCTATTGTTCTTGTCTTTAT+AGG + chr3.3:67775356-67775375 None:intergenic 30.0%
CCTGAAATTATAGAAGAAGA+TGG - chr3.3:67780507-67780526 MS.gene044208:intron 30.0%
CTAAATATAGTTCCAACCTT+AGG + chr3.3:67778641-67778660 None:intergenic 30.0%
GAAGGAAATAATAGATGTGA+TGG - chr3.3:67778578-67778597 MS.gene044208:intron 30.0%
GGGTATGATTACTAATTTAG+CGG + chr3.3:67778096-67778115 None:intergenic 30.0%
GTAACACTCAATAACTTTCT+TGG + chr3.3:67774578-67774597 None:intergenic 30.0%
GTAAGTTCACTCCTATATAT+TGG - chr3.3:67778294-67778313 MS.gene044208:intron 30.0%
GTTATTGAGTGTTACAATTG+TGG - chr3.3:67774583-67774602 MS.gene044208:CDS 30.0%
TAAAGTTGAGAAGGAAAACA+TGG - chr3.3:67779906-67779925 MS.gene044208:CDS 30.0%
TACAACAAAAGAATGTTCGA+AGG - chr3.3:67776819-67776838 MS.gene044208:CDS 30.0%
TATAAATGGGAGTCATGAAA+TGG - chr3.3:67777052-67777071 MS.gene044208:intron 30.0%
TATAACAAAAATCCAGTGCA+AGG - chr3.3:67778832-67778851 MS.gene044208:intron 30.0%
TATGTTCATGCCAATATTGA+AGG - chr3.3:67776665-67776684 MS.gene044208:CDS 30.0%
TCAAGGCAACTCTTATAAAT+GGG - chr3.3:67777039-67777058 MS.gene044208:intron 30.0%
TCATATACTTCAGGTGAATT+TGG - chr3.3:67774838-67774857 MS.gene044208:intron 30.0%
TGAACGGACGAATAAAATAT+TGG - chr3.3:67775622-67775641 MS.gene044208:CDS 30.0%
TGAATTTATTGCATTAGTGG+AGG - chr3.3:67778520-67778539 MS.gene044208:intron 30.0%
TGGATGATAAGCCAATATAT+AGG + chr3.3:67778308-67778327 None:intergenic 30.0%
TGTGAGAAAATATAAGAGGA+CGG + chr3.3:67780279-67780298 None:intergenic 30.0%
TGTTACAATTGTGGTAGAAA+GGG - chr3.3:67774592-67774611 MS.gene044208:CDS 30.0%
TTAAACTTCAGGATAACGAA+TGG - chr3.3:67779704-67779723 MS.gene044208:intron 30.0%
TTAGACTTAATCGTATAGTC+GGG - chr3.3:67776267-67776286 MS.gene044208:CDS 30.0%
! ATATGTGAGAGACACATTTT+GGG - chr3.3:67779768-67779787 MS.gene044208:intron 30.0%
! ATCTGCAATTGCATTTTTCA+TGG + chr3.3:67779509-67779528 None:intergenic 30.0%
! ATTTTCCTGTCACAGTTTTA+CGG + chr3.3:67778138-67778157 None:intergenic 30.0%
! ATTTTTATCTTCGGATGAAG+AGG - chr3.3:67778547-67778566 MS.gene044208:intron 30.0%
! CACAATTTGATCAACTTTTG+AGG + chr3.3:67780613-67780632 None:intergenic 30.0%
! GAAAAGCAAAGTTTCTTTTG+AGG - chr3.3:67775274-67775293 MS.gene044208:CDS 30.0%
! GAATATGACATTTGGTGAAA+AGG - chr3.3:67779072-67779091 MS.gene044208:intron 30.0%
! GATTTAGTTTAGGGATTAGT+GGG + chr3.3:67778116-67778135 None:intergenic 30.0%
! GCATAAACAGAGATTTTGTT+GGG - chr3.3:67774615-67774634 MS.gene044208:CDS 30.0%
! TAAAATAGCGTGCTTTGTTA+GGG + chr3.3:67778937-67778956 None:intergenic 30.0%
! TATGACCATTTACGTGTTTT+TGG - chr3.3:67775800-67775819 MS.gene044208:CDS 30.0%
! TCGTTTACGGAATGTATTTT+GGG - chr3.3:67779231-67779250 MS.gene044208:intron 30.0%
! TTAATTTGGAGATGTCCAAT+GGG - chr3.3:67774914-67774933 MS.gene044208:CDS 30.0%
! TTATTTGTTAGATTTCGTGG+GGG + chr3.3:67776760-67776779 None:intergenic 30.0%
! TTCGCTAATTTGATGGATAA+AGG - chr3.3:67776338-67776357 MS.gene044208:CDS 30.0%
! TTTCCATTGATTGTTTGGTT+GGG + chr3.3:67777722-67777741 None:intergenic 30.0%
!! AATTGTTTGTTGTTAGATGG+AGG - chr3.3:67775656-67775675 MS.gene044208:CDS 30.0%
!! AGTGATGATGGAATACATTA+TGG + chr3.3:67777455-67777474 None:intergenic 30.0%
!! ATAGCTTGTGTAAGTCATTT+TGG - chr3.3:67779955-67779974 MS.gene044208:CDS 30.0%
!! ATTGTTTGTTGTTAGATGGA+GGG - chr3.3:67775657-67775676 MS.gene044208:CDS 30.0%
!! CAGTTTTACGGATTTAGTTT+AGG + chr3.3:67778126-67778145 None:intergenic 30.0%
!! GTGATGATGGAATACATTAT+GGG + chr3.3:67777454-67777473 None:intergenic 30.0%
!! GTTCAAGTAGTTGATAAAGT+TGG - chr3.3:67780802-67780821 MS.gene044208:CDS 30.0%
!! TTTTCCATTGATTGTTTGGT+TGG + chr3.3:67777723-67777742 None:intergenic 30.0%
!!! GGAGGAAGTATTTTTATCTT+CGG - chr3.3:67778538-67778557 MS.gene044208:intron 30.0%
!!! GTTACATGTATGTTTTTAGG+GGG - chr3.3:67780917-67780936 MS.gene044208:CDS 30.0%
!!! GTTTTTTGCTCATATACTTC+AGG - chr3.3:67774829-67774848 MS.gene044208:intron 30.0%
!!! TTACATGTATGTTTTTAGGG+GGG - chr3.3:67780918-67780937 MS.gene044208:CDS 30.0%
AAAAAGGAGAATGAGGACAA+AGG - chr3.3:67774643-67774662 MS.gene044208:intron 35.0%
AAAAAGGTTCCAGAAAAGCT+AGG - chr3.3:67779574-67779593 MS.gene044208:intron 35.0%
AAACCCAAGTCTTTCTTGAA+TGG + chr3.3:67775412-67775431 None:intergenic 35.0%
AAAGAAGAAGATTCAGATGG+TGG - chr3.3:67774685-67774704 MS.gene044208:intron 35.0%
AAGAATCCCTTGAGAACAAA+CGG + chr3.3:67775029-67775048 None:intergenic 35.0%
ACATTGCATGTGTCAAGTAA+AGG + chr3.3:67775107-67775126 None:intergenic 35.0%
ACCTATGTATGTTGTTGTCA+AGG - chr3.3:67777022-67777041 MS.gene044208:intron 35.0%
ACGGACGAATAAAATATTGG+CGG - chr3.3:67775625-67775644 MS.gene044208:CDS 35.0%
AGGATACTAAGACCTTTACT+TGG - chr3.3:67779413-67779432 MS.gene044208:intron 35.0%
AGGCATACCCTTATTAAATG+TGG - chr3.3:67780321-67780340 MS.gene044208:CDS 35.0%
AGTAGCAAAAATGGAGATGA+TGG - chr3.3:67778731-67778750 MS.gene044208:intron 35.0%
AGTATTACAAGAGTTATGCC+CGG - chr3.3:67778681-67778700 MS.gene044208:intron 35.0%
AGTTGCAGGATCCATATTTA+AGG + chr3.3:67776635-67776654 None:intergenic 35.0%
ATAGAAAACCATATGGCTTC+AGG - chr3.3:67776371-67776390 MS.gene044208:CDS 35.0%
ATATGCTACAAATCATACGG+AGG - chr3.3:67776600-67776619 MS.gene044208:CDS 35.0%
ATGACCATTCAAGAAAGACT+TGG - chr3.3:67775405-67775424 MS.gene044208:CDS 35.0%
ATTCTTGGAAACTTTCCAAG+GGG - chr3.3:67775043-67775062 MS.gene044208:CDS 35.0%
CATAGGTGAGAATCGTAAAA+TGG + chr3.3:67777009-67777028 None:intergenic 35.0%
CCACTGTGAGAAAATATAAG+AGG + chr3.3:67780283-67780302 None:intergenic 35.0%
CTATAGTTGTTGAAGCGAAT+GGG - chr3.3:67779044-67779063 MS.gene044208:intron 35.0%
CTATTACAACTACACTTCTG+TGG + chr3.3:67778253-67778272 None:intergenic 35.0%
CTCTTATGTCCAATAAGCTT+AGG + chr3.3:67777526-67777545 None:intergenic 35.0%
CTTTCTTGCTAGAACTGTTA+AGG + chr3.3:67776165-67776184 None:intergenic 35.0%
GAACCAAATAGTGTTCATGA+AGG - chr3.3:67778608-67778627 MS.gene044208:intron 35.0%
GAAGGGAATATGACGTAAAA+GGG + chr3.3:67776987-67777006 None:intergenic 35.0%
GAATATGACGTAAAAGGGAA+GGG + chr3.3:67776982-67777001 None:intergenic 35.0%
GATTCTTGGAAACTTTCCAA+GGG - chr3.3:67775042-67775061 MS.gene044208:CDS 35.0%
GGAACCATATAGATAAAGTG+CGG - chr3.3:67779101-67779120 MS.gene044208:intron 35.0%
GGATGCAAAAGCCTTAAATA+TGG - chr3.3:67776621-67776640 MS.gene044208:CDS 35.0%
GGATTTGAAAAAGGAGAATG+AGG - chr3.3:67774636-67774655 MS.gene044208:intron 35.0%
GGGTATGAGAATATGACATT+TGG - chr3.3:67779064-67779083 MS.gene044208:intron 35.0%
GTACACTTAAAATCACACTG+AGG - chr3.3:67775965-67775984 MS.gene044208:CDS 35.0%
GTAGGGATTATAAGTGATGA+TGG + chr3.3:67777467-67777486 None:intergenic 35.0%
GTCAAGGCAACTCTTATAAA+TGG - chr3.3:67777038-67777057 MS.gene044208:intron 35.0%
GTGAGAATCGTAAAATGGAA+GGG + chr3.3:67777004-67777023 None:intergenic 35.0%
GTGTTACAATTGTGGTAGAA+AGG - chr3.3:67774591-67774610 MS.gene044208:CDS 35.0%
GTTACAATTGTGGTAGAAAG+GGG - chr3.3:67774593-67774612 MS.gene044208:CDS 35.0%
TAAATCCGTAAAACTGTGAC+AGG - chr3.3:67778130-67778149 MS.gene044208:intron 35.0%
TAAATTAGTCCACTTCACGT+AGG + chr3.3:67775874-67775893 None:intergenic 35.0%
TAACTCCAAAACCTATAGAC+CGG + chr3.3:67778703-67778722 None:intergenic 35.0%
TAATTTGGAGATGTCCAATG+GGG - chr3.3:67774915-67774934 MS.gene044208:CDS 35.0%
TCACCTTCATGAACACTATT+TGG + chr3.3:67778614-67778633 None:intergenic 35.0%
TCATGAAGGTGAAATACCTA+AGG - chr3.3:67778622-67778641 MS.gene044208:intron 35.0%
TCATGCTTGCTTTGATAGAT+TGG - chr3.3:67780059-67780078 MS.gene044208:CDS 35.0%
TCGCTTCAACAACTATAGAT+CGG + chr3.3:67779042-67779061 None:intergenic 35.0%
TCGGTTATTCGCTAATTTGA+TGG - chr3.3:67776331-67776350 MS.gene044208:CDS 35.0%
TCTATAGTTGTTGAAGCGAA+TGG - chr3.3:67779043-67779062 MS.gene044208:intron 35.0%
TCTTGGAATTACTTCTGCTT+TGG + chr3.3:67774561-67774580 None:intergenic 35.0%
TGACCATTCAAGAAAGACTT+GGG - chr3.3:67775406-67775425 MS.gene044208:CDS 35.0%
TGATCACATTTCTTCAAGTG+TGG + chr3.3:67775239-67775258 None:intergenic 35.0%
TGCACCAAATCAAGAATTTC+TGG + chr3.3:67775317-67775336 None:intergenic 35.0%
TGCATCCAAAAACACGTAAA+TGG + chr3.3:67775808-67775827 None:intergenic 35.0%
TGGTGATTTACTCCAACAAA+AGG + chr3.3:67779352-67779371 None:intergenic 35.0%
TTAATCACTTGATAGAGCGA+TGG + chr3.3:67778328-67778347 None:intergenic 35.0%
TTACCCAACCAAACAATCAA+TGG - chr3.3:67777716-67777735 MS.gene044208:intron 35.0%
TTAGAACTCAATGATCAAGC+TGG - chr3.3:67778995-67779014 MS.gene044208:intron 35.0%
TTTACTTGACACATGCAATG+TGG - chr3.3:67775106-67775125 MS.gene044208:CDS 35.0%
TTTGTTGGAGTAAATCACCA+TGG - chr3.3:67779352-67779371 MS.gene044208:intron 35.0%
! AGGGCTGCATATGAATATTT+TGG - chr3.3:67779268-67779287 MS.gene044208:intron 35.0%
! ATGAAGTACCAGAGATGATT+TGG - chr3.3:67775759-67775778 MS.gene044208:CDS 35.0%
! ATTCCAAGAATTTCAAGTGG+AGG - chr3.3:67780017-67780036 MS.gene044208:CDS 35.0%
! CAGAGGTCTTTACGTTTTAA+TGG - chr3.3:67775593-67775612 MS.gene044208:CDS 35.0%
! CATATGTGAGAGACACATTT+TGG - chr3.3:67779767-67779786 MS.gene044208:intron 35.0%
! CATTTGGTGAAAAGGATTGT+AGG - chr3.3:67779080-67779099 MS.gene044208:intron 35.0%
! CCTCTTATATTTTCTCACAG+TGG - chr3.3:67780280-67780299 MS.gene044208:CDS 35.0%
! CTAAAATAGCGTGCTTTGTT+AGG + chr3.3:67778938-67778957 None:intergenic 35.0%
! CTTAACAGTTCTAGCAAGAA+AGG - chr3.3:67776163-67776182 MS.gene044208:CDS 35.0%
! CTTATATTTTCTCACAGTGG+AGG - chr3.3:67780283-67780302 MS.gene044208:CDS 35.0%
! CTTTTACGAAGTTGCTTCTA+CGG - chr3.3:67780401-67780420 MS.gene044208:CDS 35.0%
! GAAATTTGGTCTCTTTTCTG+AGG + chr3.3:67776699-67776718 None:intergenic 35.0%
! GGATTTAGTTTAGGGATTAG+TGG + chr3.3:67778117-67778136 None:intergenic 35.0%
! GGCATAAACAGAGATTTTGT+TGG - chr3.3:67774614-67774633 MS.gene044208:CDS 35.0%
! GGTGACTTTCTGAGAAAAAT+TGG - chr3.3:67775539-67775558 MS.gene044208:CDS 35.0%
! GTCGTTTACGGAATGTATTT+TGG - chr3.3:67779230-67779249 MS.gene044208:intron 35.0%
! GTTAATTTGGAGATGTCCAA+TGG - chr3.3:67774913-67774932 MS.gene044208:CDS 35.0%
! TGCATATGCATAGATAATGG+AGG - chr3.3:67775518-67775537 MS.gene044208:CDS 35.0%
! TTGGTGCATTGTCATTTATG+TGG - chr3.3:67775329-67775348 MS.gene044208:CDS 35.0%
! TTTGAGGACTTCCTTTTTGA+AGG + chr3.3:67780597-67780616 None:intergenic 35.0%
! TTTGATGATTTCCACTTCCT+TGG + chr3.3:67780671-67780690 None:intergenic 35.0%
! TTTTGGATCCTCGTTTGAAA+AGG - chr3.3:67778969-67778988 MS.gene044208:intron 35.0%
!! AAGGAAAACATGGCTGATTT+TGG - chr3.3:67779916-67779935 MS.gene044208:CDS 35.0%
!! AATTTGAGTTGTGGCATAAG+AGG - chr3.3:67775144-67775163 MS.gene044208:CDS 35.0%
!! TCAAGAATTTCTGGTCTTCT+AGG + chr3.3:67775308-67775327 None:intergenic 35.0%
!! TGAATTTGGTGATGTGAAGT+TGG - chr3.3:67774852-67774871 MS.gene044208:intron 35.0%
!!! ACTTCCTTGGCTTCTTTTTT+GGG + chr3.3:67780658-67780677 None:intergenic 35.0%
!!! AGTTTTAGGAGGAATGAACA+TGG - chr3.3:67780948-67780967 MS.gene044208:CDS 35.0%
!!! GTTTTAATGGTGTTGCTGAA+CGG - chr3.3:67775606-67775625 MS.gene044208:CDS 35.0%
!!! TCTTGCTTTGTTTTGAGCAA+AGG - chr3.3:67776783-67776802 MS.gene044208:CDS 35.0%
AACTCCAAAACCTATAGACC+GGG + chr3.3:67778702-67778721 None:intergenic 40.0%
AAGCTATGCGATGAAGGTTA+TGG - chr3.3:67775003-67775022 MS.gene044208:CDS 40.0%
AATGTGTCTCTCACATATGC+AGG + chr3.3:67779766-67779785 None:intergenic 40.0%
ACTCCAACAAAAGGAGCAAA+TGG + chr3.3:67779343-67779362 None:intergenic 40.0%
AGACCAAATTTCACCACACA+TGG - chr3.3:67776707-67776726 MS.gene044208:CDS 40.0%
AGCAAATTCAACCTGATGTC+TGG + chr3.3:67774973-67774992 None:intergenic 40.0%
AGGATAACGAATGGTTGAAG+GGG - chr3.3:67779713-67779732 MS.gene044208:intron 40.0%
ATGCCATGTGTGGTGAAATT+TGG + chr3.3:67776713-67776732 None:intergenic 40.0%
CAAAAAAGAAGCCAAGGAAG+TGG - chr3.3:67780657-67780676 MS.gene044208:CDS 40.0%
CAAAAGAATGTTCGAAGGGT+TGG - chr3.3:67776824-67776843 MS.gene044208:CDS 40.0%
CAACCTCCACTTGAAATTCT+TGG + chr3.3:67780023-67780042 None:intergenic 40.0%
CAGGATAACGAATGGTTGAA+GGG - chr3.3:67779712-67779731 MS.gene044208:intron 40.0%
CATAGCATCTTGAAAGTTGC+AGG + chr3.3:67776649-67776668 None:intergenic 40.0%
CCAACAGTTAGAAACCAGAA+GGG - chr3.3:67776206-67776225 MS.gene044208:CDS 40.0%
CGTAGAAGCAACTTCGTAAA+AGG + chr3.3:67780403-67780422 None:intergenic 40.0%
CTCAGAGTCTTTCTCATTGA+AGG + chr3.3:67780163-67780182 None:intergenic 40.0%
CTCTGGTACTTCATGTTGTA+AGG + chr3.3:67775753-67775772 None:intergenic 40.0%
CTTGCAATTTAGATGCACAC+AGG + chr3.3:67780777-67780796 None:intergenic 40.0%
CTTTGTGTGCTTAAGCTAAC+AGG - chr3.3:67780237-67780256 MS.gene044208:intron 40.0%
GAAGGTGAAATACCTAAGGT+TGG - chr3.3:67778626-67778645 MS.gene044208:intron 40.0%
GAATCGAACTTGAGACTTTG+AGG - chr3.3:67775989-67776008 MS.gene044208:CDS 40.0%
GAGAATGAGGACAAAGGTAA+AGG - chr3.3:67774649-67774668 MS.gene044208:intron 40.0%
GAGGACAAAGGTAAAGGTAA+AGG - chr3.3:67774655-67774674 MS.gene044208:intron 40.0%
GATGAAGAGGAAATCAACGA+AGG - chr3.3:67778560-67778579 MS.gene044208:intron 40.0%
GCCTTGACAACAACATACAT+AGG + chr3.3:67777026-67777045 None:intergenic 40.0%
GCTTGCTTTGATAGATTGGA+AGG - chr3.3:67780063-67780082 MS.gene044208:CDS 40.0%
GGAAGCAAAGCCTTCAATAT+TGG + chr3.3:67776678-67776697 None:intergenic 40.0%
GGAAGGGAATATGACGTAAA+AGG + chr3.3:67776988-67777007 None:intergenic 40.0%
GGAATATGACGTAAAAGGGA+AGG + chr3.3:67776983-67777002 None:intergenic 40.0%
GGATCTATGATTGTTGCAAG+AGG - chr3.3:67775066-67775085 MS.gene044208:CDS 40.0%
GGATTCTTGGAAACTTTCCA+AGG - chr3.3:67775041-67775060 MS.gene044208:CDS 40.0%
GGTCTCTATTACCTGAATAC+CGG + chr3.3:67774540-67774559 None:intergenic 40.0%
GGTGAGAATCGTAAAATGGA+AGG + chr3.3:67777005-67777024 None:intergenic 40.0%
GTCTCCGCACTTTATCTATA+TGG + chr3.3:67779108-67779127 None:intergenic 40.0%
GTTTGTTCTCAAGGGATTCT+TGG - chr3.3:67775028-67775047 MS.gene044208:CDS 40.0%
TCAATACTCAATGCCATGTG+TGG + chr3.3:67776723-67776742 None:intergenic 40.0%
TCAATCCGTAAAACTGTGAC+AGG - chr3.3:67778213-67778232 MS.gene044208:intron 40.0%
TCACATGAGTGAGAAAGACA+TGG - chr3.3:67775172-67775191 MS.gene044208:CDS 40.0%
TCAGGATAACGAATGGTTGA+AGG - chr3.3:67779711-67779730 MS.gene044208:intron 40.0%
TCATGTTGTAAGGACACACA+TGG + chr3.3:67775743-67775762 None:intergenic 40.0%
TCCAACAGTTAGAAACCAGA+AGG - chr3.3:67776205-67776224 MS.gene044208:CDS 40.0%
TGAGCAAAAAACATCTCTCC+TGG + chr3.3:67774821-67774840 None:intergenic 40.0%
TGTTGTGAACAGCCAAGTAA+AGG + chr3.3:67779428-67779447 None:intergenic 40.0%
TTACCTGACCAAATCATCTC+TGG + chr3.3:67775770-67775789 None:intergenic 40.0%
TTACTTGGCTGTTCACAACA+TGG - chr3.3:67779428-67779447 MS.gene044208:intron 40.0%
TTATGGCCGTTTGTTCTCAA+GGG - chr3.3:67775020-67775039 MS.gene044208:CDS 40.0%
TTCTTGGAAACTTTCCAAGG+GGG - chr3.3:67775044-67775063 MS.gene044208:CDS 40.0%
TTGGCTAATGACTCAATGCT+GGG + chr3.3:67776539-67776558 None:intergenic 40.0%
TTTACTCTAGCATGTAGTCG+TGG - chr3.3:67778764-67778783 MS.gene044208:intron 40.0%
TTTAGGAGGAATGAACATGG+TGG - chr3.3:67780951-67780970 MS.gene044208:CDS 40.0%
TTTCGAGAGACCGAAAGAAA+AGG + chr3.3:67777411-67777430 None:intergenic 40.0%
TTTGGCTAATGACTCAATGC+TGG + chr3.3:67776540-67776559 None:intergenic 40.0%
! AAGCTTTTGTGAAGAGTCAG+CGG - chr3.3:67775828-67775847 MS.gene044208:CDS 40.0%
! ACAGTTCTAGCAAGAAAGGT+AGG - chr3.3:67776167-67776186 MS.gene044208:CDS 40.0%
! CAGGTTGAATTTGCTTTCTG+TGG - chr3.3:67774978-67774997 MS.gene044208:CDS 40.0%
! CATGGTCAATCTGTGTTGTT+GGG - chr3.3:67779370-67779389 MS.gene044208:intron 40.0%
! CTGTTAGCTTAAGCACACAA+AGG + chr3.3:67780239-67780258 None:intergenic 40.0%
! GAAGGTGTGTTAAAGTGTGT+TGG - chr3.3:67774880-67774899 MS.gene044208:CDS 40.0%
! TATTTTCTCACAGTGGAGGA+AGG - chr3.3:67780287-67780306 MS.gene044208:CDS 40.0%
! TCTAACCTCCTTTTCAAACG+AGG + chr3.3:67778980-67778999 None:intergenic 40.0%
! TTGCATTGGTGAATGCTTTC+TGG + chr3.3:67779996-67780015 None:intergenic 40.0%
!! ATGCCATTTGCTCCTTTTGT+TGG - chr3.3:67779337-67779356 MS.gene044208:intron 40.0%
!! CAGCTGAGAAATTTGAGTTG+TGG - chr3.3:67775135-67775154 MS.gene044208:CDS 40.0%
!! TCACAGTTTTACGGATTGAG+AGG + chr3.3:67778212-67778231 None:intergenic 40.0%
!! TGGTGAATGCTTTCTGGAAT+TGG + chr3.3:67779990-67780009 None:intergenic 40.0%
!! TGTTAAAGTGTGTTGGCCTT+GGG - chr3.3:67774887-67774906 MS.gene044208:CDS 40.0%
!! TGTTGATAGTGCATCCAGTT+GGG - chr3.3:67774762-67774781 MS.gene044208:CDS 40.0%
!! TTGTTGATAGTGCATCCAGT+TGG - chr3.3:67774761-67774780 MS.gene044208:CDS 40.0%
!!! CACTTCCTTGGCTTCTTTTT+TGG + chr3.3:67780659-67780678 None:intergenic 40.0%
AACAATCATAGATCCCCCCT+TGG + chr3.3:67775061-67775080 None:intergenic 45.0%
AAGAAAGGTAGGTCACAGGA+TGG - chr3.3:67776178-67776197 MS.gene044208:CDS 45.0%
AAGAGTTATGCCCGGTCTAT+AGG - chr3.3:67778689-67778708 MS.gene044208:intron 45.0%
AAGCTATCCATTGAGCTGTG+TGG - chr3.3:67776940-67776959 MS.gene044208:CDS 45.0%
AATGGGAGTCATGAAATGGG+AGG - chr3.3:67777056-67777075 MS.gene044208:intron 45.0%
ACATGGTTGGAATGCATGCA+TGG - chr3.3:67779445-67779464 MS.gene044208:intron 45.0%
ACCACTATCAATCACCCAAC+TGG + chr3.3:67774779-67774798 None:intergenic 45.0%
AGGACCCAAAAAAGAAGCCA+AGG - chr3.3:67780651-67780670 MS.gene044208:CDS 45.0%
ATGTGCTTTACTGTCAAGCG+AGG - chr3.3:67779393-67779412 MS.gene044208:intron 45.0%
CACAGTGGAGGAAGGATATA+AGG - chr3.3:67780295-67780314 MS.gene044208:CDS 45.0%
CCAACAACACAGATTGACCA+TGG + chr3.3:67779372-67779391 None:intergenic 45.0%
CCATGGTCAATCTGTGTTGT+TGG - chr3.3:67779369-67779388 MS.gene044208:intron 45.0%
CTCAATGCTTCACCCCAAAA+CGG + chr3.3:67775692-67775711 None:intergenic 45.0%
CTTTACTTCGAGTCGGTACA+GGG + chr3.3:67780566-67780585 None:intergenic 45.0%
GAGAGTTAACTTTGCCCCAT+TGG + chr3.3:67774932-67774951 None:intergenic 45.0%
GTTATGGCCGTTTGTTCTCA+AGG - chr3.3:67775019-67775038 MS.gene044208:CDS 45.0%
TAGCAAGAAAGGTAGGTCAC+AGG - chr3.3:67776174-67776193 MS.gene044208:CDS 45.0%
TATGCCACAAACACCATCGA+TGG + chr3.3:67779549-67779568 None:intergenic 45.0%
TCCAGTTGGGTGATTGATAG+TGG - chr3.3:67774775-67774794 MS.gene044208:CDS 45.0%
TCTCCAAATTAACCTCCCCA+AGG + chr3.3:67774906-67774925 None:intergenic 45.0%
TCTCGTTCTCGTGAGACATT+CGG + chr3.3:67777990-67778009 None:intergenic 45.0%
TCTTGGAAACTTTCCAAGGG+GGG - chr3.3:67775045-67775064 MS.gene044208:CDS 45.0%
TGAAGCATGTTCCAGACATC+AGG - chr3.3:67774959-67774978 MS.gene044208:CDS 45.0%
TGGATCCTCGTTTGAAAAGG+AGG - chr3.3:67778972-67778991 MS.gene044208:intron 45.0%
TGGGGCAAAGTTAACTCTCA+AGG - chr3.3:67774933-67774952 MS.gene044208:CDS 45.0%
TTCAGGGCATGTTTCTTGAG+AGG + chr3.3:67780493-67780512 None:intergenic 45.0%
TTGGCTGTTCACAACATGGT+TGG - chr3.3:67779432-67779451 MS.gene044208:intron 45.0%
! ACTTGCTGACTAGTCGATGT+GGG + chr3.3:67776875-67776894 None:intergenic 45.0%
! AGAATGTTCGAAGGGTTGGT+TGG - chr3.3:67776828-67776847 MS.gene044208:CDS 45.0%
! AGTCAGCGGTGTGTGTTTTT+AGG - chr3.3:67775842-67775861 MS.gene044208:CDS 45.0%
! GATGTGAAGTTGGCTCATGA+AGG - chr3.3:67774862-67774881 MS.gene044208:intron 45.0%
! GTGTTAAAGTGTGTTGGCCT+TGG - chr3.3:67774886-67774905 MS.gene044208:CDS 45.0%
! TACTTGCTGACTAGTCGATG+TGG + chr3.3:67776876-67776895 None:intergenic 45.0%
! TATGCCCGGTCTATAGGTTT+TGG - chr3.3:67778695-67778714 MS.gene044208:intron 45.0%
! TCGAACTTGAGACTTTGAGG+AGG - chr3.3:67775992-67776011 MS.gene044208:CDS 45.0%
! TGTGAGAGACACATTTTGGG+CGG - chr3.3:67779771-67779790 MS.gene044208:intron 45.0%
!! CATTCAATCTAGCCTTGCAC+TGG + chr3.3:67778847-67778866 None:intergenic 45.0%
!! CCCTTCTGGTTTCTAACTGT+TGG + chr3.3:67776209-67776228 None:intergenic 45.0%
!! CTGTACCGACTCGAAGTAAA+GGG - chr3.3:67780565-67780584 MS.gene044208:CDS 45.0%
!! GAGGACTTCCTTTTTGAAGG+AGG + chr3.3:67780594-67780613 None:intergenic 45.0%
!! GAGTGTCTACCTAGCTTTTC+TGG + chr3.3:67779586-67779605 None:intergenic 45.0%
!! GTACCAGAGATGATTTGGTC+AGG - chr3.3:67775764-67775783 MS.gene044208:CDS 45.0%
!! GTTAAAGTGTGTTGGCCTTG+GGG - chr3.3:67774888-67774907 MS.gene044208:CDS 45.0%
!! GTTTTACGGATTGAGAGGAG+TGG + chr3.3:67778207-67778226 None:intergenic 45.0%
!!! AGGGGGGACACATTAGTTTT+AGG - chr3.3:67780934-67780953 MS.gene044208:CDS 45.0%
!!! CGGTGTGTGTTTTTAGGCTA+TGG - chr3.3:67775848-67775867 MS.gene044208:CDS 45.0%
!!! GGGGACACATTAGTTTTAGG+AGG - chr3.3:67780937-67780956 MS.gene044208:CDS 45.0%
!!! TTTTAATAATTTATTAGTTA+TGG + chr3.3:67777221-67777240 None:intergenic 5.0%
!!! TTTTATTGTTATATTAAAAA+AGG - chr3.3:67778024-67778043 MS.gene044208:intron 5.0%
ACGATAGCCACACAGCTCAA+TGG + chr3.3:67776950-67776969 None:intergenic 50.0%
AGGTGCACGCCTAAGCTTAT+TGG - chr3.3:67777514-67777533 MS.gene044208:intron 50.0%
ATTGAGCTGTGTGGCTATCG+TGG - chr3.3:67776949-67776968 MS.gene044208:CDS 50.0%
CCTTTACTTCGAGTCGGTAC+AGG + chr3.3:67780567-67780586 None:intergenic 50.0%
CTCGTTCTCGTGAGACATTC+GGG + chr3.3:67777989-67778008 None:intergenic 50.0%
GAGAGGAGTGGAAAAACCGT+CGG + chr3.3:67778195-67778214 None:intergenic 50.0%
GGAGGAAGGATATAAGGCGA+AGG - chr3.3:67780301-67780320 MS.gene044208:CDS 50.0%
GTGGCTAAGCTATGCGATGA+AGG - chr3.3:67774997-67775016 MS.gene044208:CDS 50.0%
TTCCAAAAGCTCGCCATCGA+TGG - chr3.3:67779533-67779552 MS.gene044208:intron 50.0%
TTGGGCAGATGCGAGATGTA+GGG - chr3.3:67779249-67779268 MS.gene044208:intron 50.0%
TTTGGGCAGATGCGAGATGT+AGG - chr3.3:67779248-67779267 MS.gene044208:intron 50.0%
! AGGGCTTCCAGAACCGTTTT+GGG - chr3.3:67775676-67775695 MS.gene044208:CDS 50.0%
! CTTCAGCACATGTCACTTCC+AGG - chr3.3:67774800-67774819 MS.gene044208:intron 50.0%
! GTGAGAGACACATTTTGGGC+GGG - chr3.3:67779772-67779791 MS.gene044208:intron 50.0%
! TGGCCTTGGGGAGGTTAATT+TGG - chr3.3:67774900-67774919 MS.gene044208:CDS 50.0%
!! AAGGGCGTCCTCCTTCAAAA+AGG - chr3.3:67780583-67780602 MS.gene044208:CDS 50.0%
!! CCTGTACCGACTCGAAGTAA+AGG - chr3.3:67780564-67780583 MS.gene044208:CDS 50.0%
AAAGTGCGGAGACTGCGACT+TGG - chr3.3:67779115-67779134 MS.gene044208:intron 55.0%
AAGTGCGGAGACTGCGACTT+GGG - chr3.3:67779116-67779135 MS.gene044208:intron 55.0%
ACTTGGGGTTGGAGATGCTG+AGG - chr3.3:67779132-67779151 MS.gene044208:intron 55.0%
AGGCTATGGCCTACGTGAAG+TGG - chr3.3:67775862-67775881 MS.gene044208:CDS 55.0%
CTCACGAGAACGAGATGACG+TGG - chr3.3:67777995-67778014 MS.gene044208:intron 55.0%
CTCGCCATCGATGGTGTTTG+TGG - chr3.3:67779542-67779561 MS.gene044208:intron 55.0%
CTGTGCAGCCTGAAGCCATA+TGG + chr3.3:67776382-67776401 None:intergenic 55.0%
GCTTCACCCCAAAACGGTTC+TGG + chr3.3:67775686-67775705 None:intergenic 55.0%
GGACGCCCTTTACTTCGAGT+CGG + chr3.3:67780573-67780592 None:intergenic 55.0%
! CACCATCGATGGCGAGCTTT+TGG + chr3.3:67779538-67779557 None:intergenic 55.0%
! GAGGGCTTCCAGAACCGTTT+TGG - chr3.3:67775675-67775694 MS.gene044208:CDS 55.0%
! GGGCTTCCAGAACCGTTTTG+GGG - chr3.3:67775677-67775696 MS.gene044208:CDS 55.0%
!! AAAGTGTGTTGGCCTTGGGG+AGG - chr3.3:67774891-67774910 MS.gene044208:CDS 55.0%
AGTGCGGAGACTGCGACTTG+GGG - chr3.3:67779117-67779136 MS.gene044208:intron 60.0%
AAACCGTCGGCGCATGCGCA+AGG + chr3.3:67778182-67778201 None:intergenic 65.0%
ACTCCTTGCGCATGCGCCGA+CGG - chr3.3:67778176-67778195 MS.gene044208:intron 65.0%
TCGGCGCATGCGCAAGGAGT+GGG + chr3.3:67778176-67778195 None:intergenic 65.0%
! CGGAGACTGCGACTTGGGGT+TGG - chr3.3:67779121-67779140 MS.gene044208:intron 65.0%
GTCGGCGCATGCGCAAGGAG+TGG + chr3.3:67778177-67778196 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 67774532 67781043 67774532 ID=MS.gene044208
chr3.3 mRNA 67774532 67781043 67774532 ID=MS.gene044208.t1;Parent=MS.gene044208
chr3.3 exon 67780557 67781043 67780557 ID=MS.gene044208.t1.exon1;Parent=MS.gene044208.t1
chr3.3 CDS 67780557 67781043 67780557 ID=cds.MS.gene044208.t1;Parent=MS.gene044208.t1
chr3.3 exon 67780280 67780437 67780280 ID=MS.gene044208.t1.exon2;Parent=MS.gene044208.t1
chr3.3 CDS 67780280 67780437 67780280 ID=cds.MS.gene044208.t1;Parent=MS.gene044208.t1
chr3.3 exon 67779790 67780093 67779790 ID=MS.gene044208.t1.exon3;Parent=MS.gene044208.t1
chr3.3 CDS 67779790 67780093 67779790 ID=cds.MS.gene044208.t1;Parent=MS.gene044208.t1
chr3.3 exon 67774874 67777038 67774874 ID=MS.gene044208.t1.exon4;Parent=MS.gene044208.t1
chr3.3 CDS 67774874 67777038 67774874 ID=cds.MS.gene044208.t1;Parent=MS.gene044208.t1
chr3.3 exon 67774732 67774803 67774732 ID=MS.gene044208.t1.exon5;Parent=MS.gene044208.t1
chr3.3 CDS 67774732 67774803 67774732 ID=cds.MS.gene044208.t1;Parent=MS.gene044208.t1
chr3.3 exon 67774532 67774639 67774532 ID=MS.gene044208.t1.exon6;Parent=MS.gene044208.t1
chr3.3 CDS 67774532 67774639 67774532 ID=cds.MS.gene044208.t1;Parent=MS.gene044208.t1
Gene Sequence

>MS.gene044208

ATGAACCGGTATTCAGGTAATAGAGACCAAAGCAGAAGTAATTCCAAGAAAGTTATTGAGTGTTACAATTGTGGTAGAAAGGGGCATAAACAGAGATTTTGTTGGGATTTGAAAAAGGAGAATGAGGACAAAGGTAAAGGTAAAGGTAAAATGAAAGAAGAAGATTCAGATGGTGGCTCGACTAATCTGACATATGATGATGAATTGCTTCTTGTTGAAGAGCATGATATTGTTGATAGTGCATCCAGTTGGGTGATTGATAGTGGTACTTCAGCACATGTCACTTCCAGGAGAGATGTTTTTTGCTCATATACTTCAGGTGAATTTGGTGATGTGAAGTTGGCTCATGAAGGTGTGTTAAAGTGTGTTGGCCTTGGGGAGGTTAATTTGGAGATGTCCAATGGGGCAAAGTTAACTCTCAAGGATGTGAAGCATGTTCCAGACATCAGGTTGAATTTGCTTTCTGTGGCTAAGCTATGCGATGAAGGTTATGGCCGTTTGTTCTCAAGGGATTCTTGGAAACTTTCCAAGGGGGGATCTATGATTGTTGCAAGAGGTACGAAATGTTCTAACCTTTACTTGACACATGCAATGTGGTTGAATCAGCTGAGAAATTTGAGTTGTGGCATAAGAGGTTGTGTCACATGAGTGAGAAAGACATGGTTAAGCTATGCAAGAGTAATGTGTTGTCTGACATGAGTAATCCACACTTGAAGAAATGTGATCACTGTTTTGTTGAGAAGAAAAGCAAAGTTTCTTTTGAGGTTCACTCACCTAGAAGACCAGAAATTCTTGATTTGGTGCATTGTCATTTATGTGGTCCTATAAAGACAAGAACAATAGGGGGAAGCGCATACTTTCTGAGTTTTGTTGATGACCATTCAAGAAAGACTTGGGTTTACACCTTGAAGAGTAAAAATGATGTTTTGAGCATGTTTAAGAAATTTAAGGTTTCAGTTGAGCGTGAAACTGAGAAGAAGTTGAAGTGCATATGCATAGATAATGGAGGTGACTTTCTGAGAAAAATTGGAGTTTATTGTAGAGAGAACTTGATTAGATATCAGAGGTCTTTACGTTTTAATGGTGTTGCTGAACGGACGAATAAAATATTGGCGGAAAGAGTTAATTGTTTGTTGTTAGATGGAGGGCTTCCAGAACCGTTTTGGGGTGAAGCATTGAGCACAATTGTGCATGTCTTGAATCTTTCACCATGTGTGTCCTTACAACATGAAGTACCAGAGATGATTTGGTCAGGTAAGAATGTTTCTTATGACCATTTACGTGTTTTTGGATGCAAAGCTTTTGTGAAGAGTCAGCGGTGTGTGTTTTTAGGCTATGGCCTACGTGAAGTGGACTAATTTAGTTTTTTTTAAAAAAAATTTAAATATCAATCACAAAGGAATAATGATATGATTTCTTATTAGTTCAATTTTGTACACTTAAAATCACACTGAGGAGAATCGAACTTGAGACTTTGAGGAGGAACATATTCTCATAATTTAGTTTTTAAAAAAAAATTAAATATCAATCACAAAGGAATAATGATATGATTTCTTATTAGTTCAATTTTGTAGCATATATTTTTAACTTATTGGTGTCTTTAAGATGATGTATACATCTAACGAGAAGACCTTAACAGTTCTAGCAAGAAAGGTAGGTCACAGGATGGATTGTCCAACAGTTAGAAACCAGAAGGGATAAAAAAAACATTATAAACCAAATTACTAAAAAATATTTAGACTTAATCGTATAGTCGGGTCTGTATGTTAAGACAAGTTCATCCATTATAAGCTAATTTATCGGTTATTCGCTAATTTGATGGATAAAGGAGTAAAGCTGATAGAAAACCATATGGCTTCAGGCTGCACAGATAGCATATAGAATCAAATCGAACATATGTGTTAAAGAGGATACATTTCATTTCTTAAAGCATAGGATTGAAAATCATCATGCAGACGCTTAAAACTAAAACTTATATATTTCATATATTTTGATTTGGACACTCCCAGCATTGAGTCATTAGCCAAAGTTGTGAGTGTTTATAATCATCATAAAAATTGAACAAACAATATGCTACAAATCATACGGAGGATGCAAAAGCCTTAAATATGGATCCTGCAACTTTCAAGATGCTATGTTCATGCCAATATTGAAGGCTTTGCTTCCTCAGAAAAGAGACCAAATTTCACCACACATGGCATTGAGTATTGAAGATTAGCTTTGCTCCCCCACGAAATCTAACAAATAATCTTCTTGCTTTGTTTTGAGCAAAGGAAATGAAAAATGATACAACAAAAGAATGTTCGAAGGGTTGGTTGGTATTGTATTTAATTTATAGAGCCCACATCGACTAGTCAGCAAGTAGAAGTAAACTTTGTAACGTTATAAAAAGAAAGGACTTAGTTTATAAGCTATCCATTGAGCTGTGTGGCTATCGTGGTCATATTCCCTTCCCTTTTACGTCATATTCCCTTCCATTTTACGATTCTCACCTATGTATGTTGTTGTCAAGGCAACTCTTATAAATGGGAGTCATGAAATGGGAGGAGATATGTTTTATGATGAAAGGGCTCCATAAAATTAATTTTATTTTTTATTTTCATAATTAACTTATTTCAATTATTGATTTTTCATAGTTGAACAAGATTTTCATTTTTCGGTTTTGTATTATGCGCAACAATTGACACCATAACTAATAAATTATTAAAAGCACATTGAATTTTCATAGTTTAACAAGATTTTCATTTTTCGGTTTTGATGATGACGCTTGCATGCCTCGAAATGTTTGTTTAGATTTGTAGTTTTCTTCTTGGGCTTTTGCCCTCTTTTGTACCAAAAAAAATAAAATTATTTTTTGGTTCTTATAAATATACAATCCTTTTCTTTCGGTCTCTCGAAAATATTTCTTCGATTTTTAGTCCCATAATGTATTCCATCATCACTTATAATCCCTACTAAAAAAATTCTTATATTGATTTTGATAGGTGCACGCCTAAGCTTATTGGACATAAGAGTTTGAGTTTTAATACTATATTTTTTTAAAAAAAATTGATATCTGGTTCAATGATTGAATTTGTTTTTAAATTTTTCTTATCAAATAGTTTAATGGTTAAGCTCACATATTGAAGTATGAAAAAGTGAACAATTTTGAGTTCAAACTCGAATATTTGCATTTCAACAACGTTTACCCAACCAAACAATCAATGGAAAATAATGATTTTGGTGAGCATTTTATTTTGATTGAAAGATATGATGATATATGTATAATTACTATCAATTAATATAAGAAAAGGAAAATTTTCTAAATGTTACAAAATTGATATTGATTTAAGTTATAAAATTGAACAGTTCAAATTAATGATAAATTGTGTTGATTCATTTATTAAGAAAAGGCAAAAGTTTATAAATAAAGTATAATTTTTTGAGCGCTGCTATATGCAGCGACACTTCTTTTCCCGAATGTCTCACGAGAACGAGATGACGTGGACAATGTTTTATTGTTATATTAAAAAAGGAAAATGCTAGATATCAAGAATGAATTTGAACAAAAACATGAGTTGGCCGCTAAATTAGTAATCATACCCACTAATCCCTAAACTAAATCCGTAAAACTGTGACAGGAAAATAACAAAACTCAGAGACCCACTCCTTGCGCATGCGCCGACGGTTTTTCCACTCCTCTCAATCCGTAAAACTGTGACAGGAAAATAACAAAACTCCACAGAAGTGTAGTTGTAATAGTAACAAATCAGCAAAAATCAAGTAAGTTCACTCCTATATATTGGCTTATCATCCATCGCTCTATCAAGTGATTAAACTATCTTTATGATTAATTCAATTGTGATTTTAAAATTTGATTTAGAAACTGATATGGATTAGTCTAAATTTGTATTTAAAGCTTATTCTGATGTTGTTCCTATATCACTTATATTTTTAGTTGATTATCATAAGTTTCTCCCTGTTTGTTTTATTTACTTTTTTTCCTTTTTGAATTTATTGCATTAGTGGAGGAAGTATTTTTATCTTCGGATGAAGAGGAAATCAACGAAGGAAATAATAGATGTGATGGTAGTTTAGAACCAAATAGTGTTCATGAAGGTGAAATACCTAAGGTTGGAACTATATTTAGCTCTAAAGAAGAACTTGAAGAGTATTACAAGAGTTATGCCCGGTCTATAGGTTTTGGAGTTACTAAACTTAGTAGCAAAAATGGAGATGATGGAAAAAAGTATTTTACTCTAGCATGTAGTCGTGGAACAAAGTATGTGAGTAAATCAAAGAAGCTTTTGAAGTCAAATCCTATAACAAAAATCCAGTGCAAGGCTAGATTGAATGCATGTATTTCTTTAGACGGAACAGTTACTATTTCAAAAATTGCTCTTGAGCATAATCATGATCTAAGCCCTAACAAAGCACGCTATTTTAGAAGTAATAAGATTTTGGATCCTCGTTTGAAAAGGAGGTTAGAACTCAATGATCAAGCTGGAATAAATGTGAGCAGAAATTTCCGATCTATAGTTGTTGAAGCGAATGGGTATGAGAATATGACATTTGGTGAAAAGGATTGTAGGAACCATATAGATAAAGTGCGGAGACTGCGACTTGGGGTTGGAGATGCTGAGGCGATTCAAAATTATTTTGTTAAAATGCAAAAGCAAAATAGTCAATTCTATTATGTAATGGACATTGATGATAAAAGTCGTTTACGGAATGTATTTTGGGCAGATGCGAGATGTAGGGCTGCATATGAATATTTTGGTGATGTCGTAACATTTGACACTACTTACTTAACAAATAAATATGACATGCCATTTGCTCCTTTTGTTGGAGTAAATCACCATGGTCAATCTGTGTTGTTGGGATGTGCTTTACTGTCAAGCGAGGATACTAAGACCTTTACTTGGCTGTTCACAACATGGTTGGAATGCATGCATGGACGTGCTCCAAATGCCATAATAATTGATCAAGACAATGCCATGAAAAATGCAATTGCAGATGTTTTTCCAAAAGCTCGCCATCGATGGTGTTTGTGGCATATAATGAAAAAGGTTCCAGAAAAGCTAGGTAGACACTCTCATTATGAGTCTATCAAAGAACTTTTGCATGATGCTGTATACGATTCTTTGAGTAAAAGTGATTTCATGGAAAAGTGGGAAAGAATGATTGAAGATTTTAAACTTCAGGATAACGAATGGTTGAAGGGGCTATTTGATGAAAGAAATCGTTGGGTTCCTGCATATGTGAGAGACACATTTTGGGCGGGCATGTCAACGACTCAAAGAAGTGAAAGTATGAACTCATTCTTTGATGGTTATGTAAATTCAAAGACAACATTGAAGCAATTTGTTGAACAATATGACAATGCATTGAAAGATAAAGTTGAGAAGGAAAACATGGCTGATTTTGGTTCATTTAATACGGTGATAGCTTGTGTAAGTCATTTTGGCTTTGAGTTCCAATTCCAGAAAGCATTCACCAATGCAAAATTCCAAGAATTTCAAGTGGAGGTTGCTTCTATGATTTATTGTCATGCTTGCTTTGATAGATTGGAAGGATCGAATTCTATATATTCTGTTATAGAAAGCAAGAAAAAATTTGACACAATTAAAGACATAGTGTTTGAGGTATCCTTCAATGAGAAAGACTCTGAGTTACAATGTATGTGTTGTTTGTTTCAATTCAAATGTATTTTATGCAGACACATCCTTTGTGTGCTTAAGCTAACAGGAAAAACAGAGTCATTGCCGTCCTCTTATATTTTCTCACAGTGGAGGAAGGATATAAGGCGAAGGCATACCCTTATTAAATGTGGTTTTGATAATTTAGTTGGAAATGCTGAATTGCAAAGAGTTGATAAAGCTTGTTCTGCCTTTTACGAAGTTGCTTCTACGGTGATAAATAACGATAATGATTTGTCGAAAATGATGAATCTAATCAAGAAAATAAAAAGTGAGTTTACCTCTCAAGAAACATGCCCTGAAATTATAGAAGAAGATGGTTTAGTTCATAATCAAGTGACTAAAATTCTTGACCCTGTACCGACTCGAAGTAAAGGGCGTCCTCCTTCAAAAAGGAAGTCCTCAAAAGTTGATCAAATTGTGAATAAACTTGCAAAAAAGAGGACCCAAAAAAGAAGCCAAGGAAGTGGAAATCATCAAAGTCAACAAGAGGTAATTTAAGATACATGTACATCTAAATTAATAATTTTGAATATGTCTAATTTTCAATATTTGATGGCAGGACCTGTGTGCATCTAAATTGCAAGAGAGTGTTCAAGTAGTTGATAAAGTTGGCACACAAGAGAGCATTCAAGTAAGTAATTTTATTTATTCTCAGCTTTAGTTTTAAACAATCAATGAGAACTACATACTGATTGTCTATGTTTGTTACATGTATGTTTTTAGGGGGGACACATTAGTTTTAGGAGGAATGAACATGGTGGAGTAAATAATTTAGCTCCCTTCAATCCAAATTCAATACTTATGAGTGAAGTATATCAGGTGCAAGCATAA
Protein sequence

>MS.gene044208.t1

MNRYSGNRDQSRSNSKKVIECYNCGRKGHKQRFCWDLKKENEDKGKGKGKMKEEDSDGGSTNLTYDDELLLVEEHDIVDSASSWVIDSGTSAHVTSRRDVFCSYTSGEFGDVKLAHEGVLKCVGLGEVNLEMSNGAKLTLKDVKHVPDIRLNLLSVAKLCDEAEKFELWHKRLCHMSEKDMVKLCKSNVLSDMSNPHLKKCDHCFVEKKSKVSFEVSVERETEKKLKCICIDNGGDFLRKIGVYCRENLIRYQRSLRFNGVAERTNKILAERVNCLLLDGGLPEPFWGEALSTIVHVLNLSPCVSLQHEVPEMIWSVEEVFLSSDEEEINEGNNRCDGSLEPNSVHEGEIPKVGTIFSSKEELEEYYKSYARSIGFGVTKLSSKNGDDGKKYFTLACSRGTKYVSKSKKLLKSNPITKIQCKARLNACISLDGTVTISKIALEHNHDLSPNKARYFRSNKILDPRLKRRLELNDQAGINVSRNFRSIVVEANGYENMTFGEKDCRNHIDKVRRLRLGVGDAEAIQNYFVKMQKQNSQFYYVMDIDDKSRLRNVFWADARCRAAYEYFGDVVTFDTTYLTNKYDMPFAPFVGVNHHGQSVLLGCALLSSEDTKTFTWLFTTWLECMHGRAPNAIIIDQDNAMKNAIADVFPKARHRWCLWHIMKKVPEKLGRHSHYESIKELLHDAVYDSLSKSDFMEKWERMIEDFKLQDNEWLKGLFDERNRWVPAYVRDTFWAGMSTTQRSESMNSFFDGYVNSKTTLKQFVEQYDNALKDKVEKENMADFGSFNTVIACVSHFGFEFQFQKAFTNAKFQEFQVEVASMIYCHACFDRLEGSNSIYSVIESKKKFDTIKDIVFEVSFNEKDSELQCMCCLFQFKCILCRHILCVLKLTGKTESLPSSYIFSQWRKDIRRRHTLIKCGFDNLVGNAELQRVDKACSAFYEVASTVINNDNDLSKMMNLIKKIKSEFTSQETCPEIIEEDGLVHNQVTKILDPVPTRSKGRPPSKRKSSKVDQIVNKLAKKRTQKRSQGSGNHQSQQEDLCASKLQESVQVVDKVGTQESIQGGHISFRRNEHGGVNNLAPFNPNSILMSEVYQVQA