Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044336.t1 | XP_003601528.1 | 97.4 | 494 | 13 | 0 | 1 | 494 | 4 | 497 | 1.60E-276 | 961.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044336.t1 | P94026 | 28.1 | 417 | 266 | 18 | 69 | 471 | 62 | 458 | 6.0e-27 | 123.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044336.t1 | G7J8U8 | 97.4 | 494 | 13 | 0 | 1 | 494 | 4 | 497 | 1.1e-276 | 961.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene044336.t1 | TR | SET |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044336.t1 | MTR_3g082690 | 97.368 | 494 | 13 | 0 | 1 | 494 | 4 | 497 | 0.0 | 995 |
| MS.gene044336.t1 | MTR_6g023320 | 28.846 | 312 | 195 | 9 | 62 | 351 | 65 | 371 | 2.49e-26 | 112 |
| MS.gene044336.t1 | MTR_4g082305 | 27.451 | 459 | 288 | 19 | 40 | 475 | 37 | 473 | 3.23e-26 | 111 |
| MS.gene044336.t1 | MTR_1g115980 | 31.102 | 254 | 159 | 9 | 93 | 343 | 64 | 304 | 2.07e-22 | 99.0 |
| MS.gene044336.t1 | MTR_1g115980 | 31.102 | 254 | 159 | 9 | 93 | 343 | 64 | 304 | 2.60e-22 | 99.4 |
| MS.gene044336.t1 | MTR_1g115980 | 31.102 | 254 | 159 | 9 | 93 | 343 | 64 | 304 | 2.63e-22 | 99.4 |
| MS.gene044336.t1 | MTR_1g115980 | 31.102 | 254 | 159 | 9 | 93 | 343 | 64 | 304 | 2.86e-22 | 99.8 |
| MS.gene044336.t1 | MTR_1g115980 | 31.102 | 254 | 159 | 9 | 93 | 343 | 64 | 304 | 2.96e-22 | 99.8 |
| MS.gene044336.t1 | MTR_1g115980 | 31.102 | 254 | 159 | 9 | 93 | 343 | 64 | 304 | 3.11e-22 | 98.6 |
| MS.gene044336.t1 | MTR_4g128240 | 23.381 | 278 | 205 | 7 | 57 | 330 | 231 | 504 | 9.08e-18 | 86.7 |
| MS.gene044336.t1 | MTR_4g082305 | 31.579 | 228 | 140 | 9 | 40 | 265 | 37 | 250 | 5.74e-17 | 82.8 |
| MS.gene044336.t1 | MTR_1g077040 | 22.330 | 309 | 187 | 8 | 66 | 327 | 8 | 310 | 2.33e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044336.t1 | AT3G07670 | 72.581 | 496 | 121 | 4 | 14 | 494 | 9 | 504 | 0.0 | 722 |
| MS.gene044336.t1 | AT3G07670 | 79.235 | 366 | 76 | 0 | 129 | 494 | 1 | 366 | 0.0 | 596 |
| MS.gene044336.t1 | AT5G14260 | 28.797 | 316 | 198 | 8 | 62 | 355 | 78 | 388 | 6.92e-30 | 121 |
| MS.gene044336.t1 | AT5G14260 | 28.797 | 316 | 198 | 8 | 62 | 355 | 78 | 388 | 1.89e-29 | 121 |
| MS.gene044336.t1 | AT5G14260 | 28.797 | 316 | 198 | 8 | 62 | 355 | 78 | 388 | 1.89e-29 | 121 |
| MS.gene044336.t1 | AT5G14260 | 28.797 | 316 | 198 | 8 | 62 | 355 | 78 | 388 | 1.89e-29 | 121 |
| MS.gene044336.t1 | AT1G14030 | 27.123 | 424 | 274 | 19 | 62 | 471 | 47 | 449 | 9.64e-25 | 107 |
| MS.gene044336.t1 | AT3G55080 | 29.091 | 330 | 192 | 13 | 30 | 343 | 11 | 314 | 2.32e-24 | 106 |
| MS.gene044336.t1 | AT3G55080 | 30.242 | 248 | 146 | 9 | 105 | 343 | 1 | 230 | 1.30e-21 | 97.1 |
| MS.gene044336.t1 | AT3G55080 | 30.242 | 248 | 146 | 9 | 105 | 343 | 1 | 230 | 1.30e-21 | 97.1 |
| MS.gene044336.t1 | AT3G55080 | 29.439 | 214 | 127 | 8 | 139 | 343 | 1 | 199 | 2.72e-18 | 86.7 |
| MS.gene044336.t1 | AT3G55080 | 29.224 | 219 | 126 | 9 | 139 | 343 | 1 | 204 | 2.72e-17 | 83.6 |
| MS.gene044336.t1 | AT2G18850 | 26.224 | 286 | 168 | 10 | 62 | 326 | 148 | 411 | 1.87e-16 | 82.4 |
| MS.gene044336.t1 | AT2G18850 | 26.224 | 286 | 168 | 10 | 62 | 326 | 148 | 411 | 2.10e-16 | 82.4 |
Find 112 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGGAAGAAATCAGGGTATT+TGG | 0.193374 | 3.4:-77914728 | None:intergenic |
| GAAAGGACTAATAATGTTAT+TGG | 0.198637 | 3.4:+77914573 | MS.gene044336:CDS |
| AAAGGCTTGAAAATCTTTAA+TGG | 0.210155 | 3.4:+77916364 | MS.gene044336:CDS |
| TGGTTGGCCATTGGAGTTAA+TGG | 0.222279 | 3.4:+77915734 | MS.gene044336:CDS |
| TGAAAATCTTTAATGGGTTC+TGG | 0.228182 | 3.4:+77916371 | MS.gene044336:CDS |
| GTCTTCTGTTGAGTTGTTTC+GGG | 0.232871 | 3.4:-77916145 | None:intergenic |
| TTAGAACTGTTGAAGAAATA+TGG | 0.237492 | 3.4:+77915594 | MS.gene044336:CDS |
| CAGTTCTAACTTCTCCTTAT+AGG | 0.242836 | 3.4:-77915580 | None:intergenic |
| TTGAAGAAATATGGATTATC+AGG | 0.251255 | 3.4:+77915603 | MS.gene044336:CDS |
| AATGCTTGCTCCTCTATTTC+AGG | 0.265403 | 3.4:-77915935 | None:intergenic |
| AACCATACTCACTTCTTTAC+TGG | 0.272010 | 3.4:+77913296 | MS.gene044336:CDS |
| TGTGATGTAATTACCTCTTC+AGG | 0.272230 | 3.4:-77914748 | None:intergenic |
| TTCAATACTTCACCAGCTTC+CGG | 0.274096 | 3.4:-77913166 | None:intergenic |
| AAATAAAACTACCTCGAAAA+AGG | 0.280033 | 3.4:+77915901 | MS.gene044336:CDS |
| TTGTTGCTTTGAAGAATATT+AGG | 0.281922 | 3.4:+77912517 | MS.gene044336:CDS |
| TGAGACTAGCTTCACTTATA+AGG | 0.286121 | 3.4:-77913228 | None:intergenic |
| GTAGGTTCGGTTGCCCTCTA+TGG | 0.292815 | 3.4:+77915041 | MS.gene044336:intron |
| CTTGGATTCGTGCCCTCCTT+TGG | 0.311412 | 3.4:-77915513 | None:intergenic |
| ACAACCATGGTTGAAGCTTC+AGG | 0.313304 | 3.4:+77912234 | None:intergenic |
| AGTCTTCTGTTGAGTTGTTT+CGG | 0.314214 | 3.4:-77916146 | None:intergenic |
| ACACAGGTGTTTATTTCATA+TGG | 0.317932 | 3.4:+77915447 | MS.gene044336:intron |
| ACTTGGAAGCTTCACAGATT+AGG | 0.329419 | 3.4:+77914538 | MS.gene044336:CDS |
| ACCTCTTCAGGGAAGAAATC+AGG | 0.336812 | 3.4:-77914736 | None:intergenic |
| ATGAGGACTGGTGAATTAAA+AGG | 0.337001 | 3.4:+77916346 | MS.gene044336:CDS |
| AAGGAAGAGTTTACAGAATC+AGG | 0.341934 | 3.4:-77912585 | None:intergenic |
| CTTGGAAGCTTCACAGATTA+GGG | 0.342197 | 3.4:+77914539 | MS.gene044336:CDS |
| CTCTGCAACCTCATCATTGA+TGG | 0.347009 | 3.4:+77912365 | MS.gene044336:CDS |
| AAGGCTTGAAAATCTTTAAT+GGG | 0.349585 | 3.4:+77916365 | MS.gene044336:CDS |
| CAGATGGTTCAGTTATATAT+CGG | 0.353139 | 3.4:+77913261 | MS.gene044336:CDS |
| TACCTGCTCACCTGGTTGAT+AGG | 0.356905 | 3.4:-77915258 | None:intergenic |
| GAAAGAATGCATTGGTTCCT+TGG | 0.361542 | 3.4:+77915067 | MS.gene044336:CDS |
| ATTCATCTTCTCTTGAGAAA+TGG | 0.363962 | 3.4:+77912427 | MS.gene044336:CDS |
| AAAATACAACAAGTTCTTAC+AGG | 0.366598 | 3.4:+77915994 | MS.gene044336:CDS |
| GGCCAACCAGTAATCCTTAT+AGG | 0.372376 | 3.4:-77915720 | None:intergenic |
| GGTAAGTGGATCGCTAGATT+TGG | 0.375776 | 3.4:+77916112 | MS.gene044336:intron |
| GTTGCAAGCAATGGCCAATC+TGG | 0.384726 | 3.4:-77913202 | None:intergenic |
| TCAATACTTCACCAGCTTCC+GGG | 0.387137 | 3.4:-77913165 | None:intergenic |
| GAAATCCGATGAGTCCTATA+AGG | 0.391559 | 3.4:+77915566 | MS.gene044336:CDS |
| ATTGATGGAAACTATTCCTT+GGG | 0.394039 | 3.4:+77912380 | MS.gene044336:CDS |
| TCAGGAGTGATGACAAGTTC+AGG | 0.394221 | 3.4:-77912567 | None:intergenic |
| ATTCACAAAACAACACATCT+TGG | 0.404622 | 3.4:+77912309 | MS.gene044336:CDS |
| TACCAGTAAAGAAGTGAGTA+TGG | 0.407176 | 3.4:-77913298 | None:intergenic |
| GGGGAGCTTCTGTTATCATA+TGG | 0.410226 | 3.4:+77915483 | MS.gene044336:CDS |
| TGAATTGTTTGGTTAAAAGT+AGG | 0.419376 | 3.4:-77912291 | None:intergenic |
| CATTGATGGAAACTATTCCT+TGG | 0.421613 | 3.4:+77912379 | MS.gene044336:CDS |
| AAAAGAATTCAGTTCCAGAT+TGG | 0.424118 | 3.4:+77913188 | MS.gene044336:CDS |
| TCTCCAGATACAATGATATG+AGG | 0.424444 | 3.4:+77914692 | MS.gene044336:intron |
| AAAGAATGCATTGGTTCCTT+GGG | 0.460470 | 3.4:+77915068 | MS.gene044336:CDS |
| ACCAACATCAACTTTATCAA+TGG | 0.460731 | 3.4:-77912484 | None:intergenic |
| CAACCATGGTTGAAGCTTCA+GGG | 0.470871 | 3.4:+77912235 | None:intergenic |
| GAGTGGAGCTGCCCGGAAGC+TGG | 0.475490 | 3.4:+77913154 | MS.gene044336:CDS |
| GAGAAATGGTTGTCTCAGTC+AGG | 0.477317 | 3.4:+77912441 | MS.gene044336:CDS |
| AAGGATTACTGGTTGGCCAT+TGG | 0.479274 | 3.4:+77915725 | MS.gene044336:CDS |
| AGCAGAACTAGATCGCTACT+TGG | 0.487105 | 3.4:+77914521 | MS.gene044336:CDS |
| TCCCTATCAACCAGGTGAGC+AGG | 0.488328 | 3.4:+77915256 | MS.gene044336:CDS |
| CTTGAGATATCCTGAAATAG+AGG | 0.493097 | 3.4:+77915925 | MS.gene044336:CDS |
| GATTATGATAAATCGTCAAA+GGG | 0.494942 | 3.4:+77915212 | MS.gene044336:CDS |
| GAGTCCTTCAAATGGTCATT+CGG | 0.496702 | 3.4:+77914854 | MS.gene044336:CDS |
| TTCCTATAAGGATTACTGGT+TGG | 0.499844 | 3.4:+77915718 | MS.gene044336:CDS |
| CCCTGATTTCTTCCCTGAAG+AGG | 0.501319 | 3.4:+77914735 | MS.gene044336:CDS |
| ACCTGCTCACCTGGTTGATA+GGG | 0.506098 | 3.4:-77915257 | None:intergenic |
| GGATTATGATAAATCGTCAA+AGG | 0.508301 | 3.4:+77915211 | MS.gene044336:CDS |
| CGATATATAACTGAACCATC+TGG | 0.510053 | 3.4:-77913260 | None:intergenic |
| TGCATTCTTTCCATCCATAG+AGG | 0.513905 | 3.4:-77915055 | None:intergenic |
| GTGATGTAATTACCTCTTCA+GGG | 0.518826 | 3.4:-77914747 | None:intergenic |
| GAAGAAGACTGAGGGATATG+AGG | 0.527158 | 3.4:+77916329 | MS.gene044336:CDS |
| AATGCCGAATGACCATTTGA+AGG | 0.527488 | 3.4:-77914858 | None:intergenic |
| ATCATATGGATTTGTTCCAA+AGG | 0.534845 | 3.4:+77915497 | MS.gene044336:CDS |
| TTTATGATTACCTGCTCACC+TGG | 0.538716 | 3.4:-77915266 | None:intergenic |
| AGGAATAAGAGTGGTGGTGT+TGG | 0.543116 | 3.4:-77912271 | None:intergenic |
| CCTCTTCAGGGAAGAAATCA+GGG | 0.543445 | 3.4:-77914735 | None:intergenic |
| TTGATCGATCCACAGGTAAG+TGG | 0.549849 | 3.4:+77916098 | MS.gene044336:intron |
| GTTCGGTTGCCCTCTATGGA+TGG | 0.550112 | 3.4:+77915045 | MS.gene044336:CDS |
| AAAGTTGATGTTGGTGAGAG+AGG | 0.560244 | 3.4:+77912492 | MS.gene044336:CDS |
| TTATTAGGAGTGGAGCTGCC+CGG | 0.560448 | 3.4:+77913147 | MS.gene044336:intron |
| GACAACTCAACTGAATCACT+TGG | 0.561180 | 3.4:-77915531 | None:intergenic |
| TTCTGGAATCGTTTCCAATG+AGG | 0.561253 | 3.4:+77916388 | MS.gene044336:CDS |
| TCCATTGATAAAGTTGATGT+TGG | 0.569634 | 3.4:+77912483 | MS.gene044336:CDS |
| TCAACATCGAGTCCTTCAAA+TGG | 0.570581 | 3.4:+77914846 | MS.gene044336:CDS |
| TATGGATTTGTTCCAAAGGA+GGG | 0.574263 | 3.4:+77915501 | MS.gene044336:CDS |
| TCAATGGACATCTTCTGAGA+AGG | 0.574688 | 3.4:-77912468 | None:intergenic |
| GCATAAGCCATTAACTCCAA+TGG | 0.580262 | 3.4:-77915741 | None:intergenic |
| ATAAGGTAAGTTGCAAGCAA+TGG | 0.582668 | 3.4:-77913211 | None:intergenic |
| CTCCAGATACAATGATATGA+GGG | 0.583933 | 3.4:+77914693 | MS.gene044336:intron |
| GTCTCATGAAATCTTCCAGA+TGG | 0.584762 | 3.4:+77913245 | MS.gene044336:CDS |
| AGACTGAGGGATATGAGGAC+TGG | 0.586138 | 3.4:+77916334 | MS.gene044336:CDS |
| ATATGGATTTGTTCCAAAGG+AGG | 0.589672 | 3.4:+77915500 | MS.gene044336:CDS |
| GCATTCTTTCCATCCATAGA+GGG | 0.590910 | 3.4:-77915054 | None:intergenic |
| CTTCTCCTTATAGGACTCAT+CGG | 0.591036 | 3.4:-77915571 | None:intergenic |
| GTTAAAAGTAGGAATAAGAG+TGG | 0.593264 | 3.4:-77912280 | None:intergenic |
| TGAAGAAATATGGATTATCA+GGG | 0.595613 | 3.4:+77915604 | MS.gene044336:CDS |
| AATAGTTTCCATCAATGATG+AGG | 0.598821 | 3.4:-77912373 | None:intergenic |
| CTTTCTAAAGCAGCTAGCAG+TGG | 0.601327 | 3.4:+77916169 | MS.gene044336:CDS |
| GCTTTGAAGAATATTAGGAA+AGG | 0.605109 | 3.4:+77912522 | MS.gene044336:CDS |
| TTAGGGAGAGAGCAATTGAA+AGG | 0.606641 | 3.4:+77914556 | MS.gene044336:CDS |
| CATCCCTGAAGCTTCAACCA+TGG | 0.608019 | 3.4:-77912238 | None:intergenic |
| TATGGATGGAAAGAATGCAT+TGG | 0.613912 | 3.4:+77915059 | MS.gene044336:CDS |
| GTTAGTCCTTCAAGCATGAG+AGG | 0.621487 | 3.4:+77915774 | MS.gene044336:CDS |
| CATGAGAGGAAAATTTGAAG+AGG | 0.626190 | 3.4:+77915788 | MS.gene044336:CDS |
| TGATTCATCATGTCTGCCCA+AGG | 0.634383 | 3.4:-77915084 | None:intergenic |
| CATGATGAATCATAGTTGTG+AGG | 0.635915 | 3.4:+77915095 | MS.gene044336:CDS |
| GATATTGCGAAGAAGACTGA+GGG | 0.640825 | 3.4:+77916321 | MS.gene044336:intron |
| ACTTGTGTAATAGCGAGCGC+AGG | 0.651320 | 3.4:+77916192 | MS.gene044336:CDS |
| AGAAGTGAGTATGGTTGACG+AGG | 0.657046 | 3.4:-77913289 | None:intergenic |
| GAATCATTCTCACATCCCCA+AGG | 0.662703 | 3.4:-77912396 | None:intergenic |
| ACGGATCGTCCCTATCAACC+AGG | 0.664539 | 3.4:+77915248 | MS.gene044336:CDS |
| AAAAGTAGGAATAAGAGTGG+TGG | 0.668503 | 3.4:-77912277 | None:intergenic |
| TCTTCTGTTGAGTTGTTTCG+GGG | 0.672386 | 3.4:-77916144 | None:intergenic |
| AGATATTGCGAAGAAGACTG+AGG | 0.673237 | 3.4:+77916320 | MS.gene044336:intron |
| TTGATGGAAACTATTCCTTG+GGG | 0.675898 | 3.4:+77912381 | MS.gene044336:CDS |
| AAAGGGAATTGTCTTTACGA+CGG | 0.683033 | 3.4:+77915229 | MS.gene044336:CDS |
| GGAGTGATGACAAGTTCAGG+AGG | 0.684706 | 3.4:-77912564 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGAATTAATAAACTAAAA+TGG | - | chr3.4:77912939-77912958 | None:intergenic | 10.0% |
| !! | TATTGAAATTATAGTTTAAA+AGG | - | chr3.4:77913699-77913718 | None:intergenic | 10.0% |
| !! | ACGTAAATAATAGTTATAAA+CGG | - | chr3.4:77913983-77914002 | None:intergenic | 15.0% |
| !! | ATAACATTTCTCATAAAAAA+AGG | + | chr3.4:77914447-77914466 | MS.gene044336:intron | 15.0% |
| !! | ATTTCAATAGAAAAAACTAA+AGG | + | chr3.4:77913710-77913729 | MS.gene044336:intron | 15.0% |
| !! | TAACATTTCTCATAAAAAAA+GGG | + | chr3.4:77914448-77914467 | MS.gene044336:intron | 15.0% |
| !! | TATAATAACTATGAAAACTT+AGG | - | chr3.4:77915636-77915655 | None:intergenic | 15.0% |
| !! | TCTAGAAAATTATTAAGATT+TGG | + | chr3.4:77914299-77914318 | MS.gene044336:intron | 15.0% |
| !!! | ATTATTTTGTGTGTTTATAT+TGG | + | chr3.4:77913347-77913366 | MS.gene044336:intron | 15.0% |
| !!! | ATTTGTTAAATTAGATACAT+AGG | + | chr3.4:77915299-77915318 | MS.gene044336:intron | 15.0% |
| !!! | TATTTAATTTCTACTTACAA+AGG | + | chr3.4:77916256-77916275 | MS.gene044336:intron | 15.0% |
| !!! | TCTAATATATTTTTTGTCAT+TGG | + | chr3.4:77915169-77915188 | MS.gene044336:intron | 15.0% |
| !!! | TTATTTTGTGTGTTTATATT+GGG | + | chr3.4:77913348-77913367 | MS.gene044336:intron | 15.0% |
| !! | ATATATTAGGTACAAATGAT+CGG | - | chr3.4:77914609-77914628 | None:intergenic | 20.0% |
| !! | GAACATATAATTCATGATAT+TGG | + | chr3.4:77915012-77915031 | MS.gene044336:intron | 20.0% |
| !! | GAATTAATAAACTAAAATGG+TGG | - | chr3.4:77912936-77912955 | None:intergenic | 20.0% |
| !! | TAATGATTTCAAAAGCAATT+TGG | + | chr3.4:77916033-77916052 | MS.gene044336:intron | 20.0% |
| !! | TCATATGGAAAAAAATCAAA+CGG | + | chr3.4:77915462-77915481 | MS.gene044336:CDS | 20.0% |
| !! | TTATATAAGTATTATGCTGT+CGG | + | chr3.4:77912999-77913018 | MS.gene044336:intron | 20.0% |
| !!! | ACTTGTTTGATTTTATCTAT+TGG | + | chr3.4:77912709-77912728 | MS.gene044336:intron | 20.0% |
| !!! | ATATTTTTTGTCATTGGATT+AGG | + | chr3.4:77915175-77915194 | MS.gene044336:intron | 20.0% |
| !!! | TATTTTACAATAATTCACCA+GGG | + | chr3.4:77913473-77913492 | MS.gene044336:intron | 20.0% |
| !!! | TTATACTTGCTATTTTCTTT+TGG | + | chr3.4:77913737-77913756 | MS.gene044336:intron | 20.0% |
| !!! | TTTTATTTTATTTTGACCCA+CGG | - | chr3.4:77914260-77914279 | None:intergenic | 20.0% |
| ! | AAAATACAACAAGTTCTTAC+AGG | + | chr3.4:77915994-77916013 | MS.gene044336:CDS | 25.0% |
| ! | AAAGGCTTGAAAATCTTTAA+TGG | + | chr3.4:77916364-77916383 | MS.gene044336:CDS | 25.0% |
| ! | AAATAAAACTACCTCGAAAA+AGG | + | chr3.4:77915901-77915920 | MS.gene044336:CDS | 25.0% |
| ! | AAGATGAAATAGTACCAATA+CGG | + | chr3.4:77914385-77914404 | MS.gene044336:intron | 25.0% |
| ! | AAGGCTTGAAAATCTTTAAT+GGG | + | chr3.4:77916365-77916384 | MS.gene044336:CDS | 25.0% |
| ! | AATAATGTTATTGGAACGTA+TGG | + | chr3.4:77914582-77914601 | MS.gene044336:intron | 25.0% |
| ! | AATCAACAACTATTTGACAA+CGG | + | chr3.4:77913946-77913965 | MS.gene044336:intron | 25.0% |
| ! | AATTAAGAGGAAGAAATTAG+TGG | - | chr3.4:77913841-77913860 | None:intergenic | 25.0% |
| ! | AATTTGCATTTCATTTACCA+AGG | - | chr3.4:77915341-77915360 | None:intergenic | 25.0% |
| ! | ACAAATAAAGAGAAGAAGAA+AGG | - | chr3.4:77912607-77912626 | None:intergenic | 25.0% |
| ! | ATATCCAAATCAAGTTTAGA+AGG | - | chr3.4:77913086-77913105 | None:intergenic | 25.0% |
| ! | ATATGGAAAAAAATCAAACG+GGG | + | chr3.4:77915464-77915483 | MS.gene044336:CDS | 25.0% |
| ! | ATGAAAGAAATGAACTGTAT+AGG | - | chr3.4:77914490-77914509 | None:intergenic | 25.0% |
| ! | ATGTTATGTTGACAACTTTA+TGG | - | chr3.4:77914434-77914453 | None:intergenic | 25.0% |
| ! | ATTAAGAGGAAGAAATTAGT+GGG | - | chr3.4:77913840-77913859 | None:intergenic | 25.0% |
| ! | CATATGGAAAAAAATCAAAC+GGG | + | chr3.4:77915463-77915482 | MS.gene044336:CDS | 25.0% |
| ! | GAAAGGACTAATAATGTTAT+TGG | + | chr3.4:77914573-77914592 | MS.gene044336:CDS | 25.0% |
| ! | GATTATGATAAATCGTCAAA+GGG | + | chr3.4:77915212-77915231 | MS.gene044336:CDS | 25.0% |
| ! | GTAACAAGTTTAATCATGAA+AGG | - | chr3.4:77915659-77915678 | None:intergenic | 25.0% |
| ! | TAATTTATGGAAACAGCTTA+TGG | + | chr3.4:77912757-77912776 | MS.gene044336:intron | 25.0% |
| ! | TCAAGCAAAAAAATCTTCAA+TGG | + | chr3.4:77913867-77913886 | MS.gene044336:intron | 25.0% |
| ! | TCAATAGAAAAAACTAAAGG+TGG | + | chr3.4:77913713-77913732 | MS.gene044336:intron | 25.0% |
| ! | TGAATTGTTTGGTTAAAAGT+AGG | - | chr3.4:77912294-77912313 | None:intergenic | 25.0% |
| ! | TGAGACTATGAGATAATTTA+TGG | + | chr3.4:77912744-77912763 | MS.gene044336:intron | 25.0% |
| ! | TGCTAGTTATTGAAAAACAT+GGG | - | chr3.4:77914658-77914677 | None:intergenic | 25.0% |
| ! | TTAGAACTGTTGAAGAAATA+TGG | + | chr3.4:77915594-77915613 | MS.gene044336:CDS | 25.0% |
| ! | TTGCTAGTTATTGAAAAACA+TGG | - | chr3.4:77914659-77914678 | None:intergenic | 25.0% |
| ! | TTTCTTGTATCAAATTACAC+AGG | + | chr3.4:77915431-77915450 | MS.gene044336:intron | 25.0% |
| !! | ATCTGAATCTGTTATTTGTA+TGG | + | chr3.4:77914812-77914831 | MS.gene044336:intron | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | + | chr3.4:77912883-77912902 | MS.gene044336:intron | 25.0% |
| !! | CTATTTTACAATAATTCACC+AGG | + | chr3.4:77913472-77913491 | MS.gene044336:intron | 25.0% |
| !! | TGAAGAAATATGGATTATCA+GGG | + | chr3.4:77915604-77915623 | MS.gene044336:CDS | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+GGG | + | chr3.4:77912884-77912903 | MS.gene044336:intron | 25.0% |
| !! | TTGAAGAAATATGGATTATC+AGG | + | chr3.4:77915603-77915622 | MS.gene044336:CDS | 25.0% |
| !! | TTTCTTCTTCTCTTTATTTG+TGG | + | chr3.4:77912606-77912625 | MS.gene044336:intron | 25.0% |
| !!! | ATTAAGCATCAATTTTAGCA+TGG | - | chr3.4:77913057-77913076 | None:intergenic | 25.0% |
| !!! | TGGTGTTTATGATTTTGTTT+GGG | + | chr3.4:77913115-77913134 | MS.gene044336:intron | 25.0% |
| !!! | TTGTTGCTTTGAAGAATATT+AGG | + | chr3.4:77912517-77912536 | MS.gene044336:CDS | 25.0% |
| !!! | TTTATTTTATTTTGACCCAC+GGG | - | chr3.4:77914259-77914278 | None:intergenic | 25.0% |
| AAAAGAATTCAGTTCCAGAT+TGG | + | chr3.4:77913188-77913207 | MS.gene044336:CDS | 30.0% | |
| AAGAAATCAATTGCAGTTTG+TGG | - | chr3.4:77915411-77915430 | None:intergenic | 30.0% | |
| AATAGTTTCCATCAATGATG+AGG | - | chr3.4:77912376-77912395 | None:intergenic | 30.0% | |
| AATATAAGCCCATCCTAAAA+TGG | + | chr3.4:77913629-77913648 | MS.gene044336:intron | 30.0% | |
| AATTTCTGAACAAAGCTTCT+TGG | - | chr3.4:77912962-77912981 | None:intergenic | 30.0% | |
| ACACAGGTGTTTATTTCATA+TGG | + | chr3.4:77915447-77915466 | MS.gene044336:intron | 30.0% | |
| ACCAACATCAACTTTATCAA+TGG | - | chr3.4:77912487-77912506 | None:intergenic | 30.0% | |
| ATTCACAAAACAACACATCT+TGG | + | chr3.4:77912309-77912328 | MS.gene044336:CDS | 30.0% | |
| ATTCATCTTCTCTTGAGAAA+TGG | + | chr3.4:77912427-77912446 | MS.gene044336:CDS | 30.0% | |
| ATTGATGGAAACTATTCCTT+GGG | + | chr3.4:77912380-77912399 | MS.gene044336:CDS | 30.0% | |
| ATTGTATCTGGAGAACAAAT+GGG | - | chr3.4:77914686-77914705 | None:intergenic | 30.0% | |
| CAGATGGTTCAGTTATATAT+CGG | + | chr3.4:77913261-77913280 | MS.gene044336:CDS | 30.0% | |
| CAGTTCATTTCTTTCATTTC+AGG | + | chr3.4:77914493-77914512 | MS.gene044336:intron | 30.0% | |
| CGACAAACCTATCAAAATAA+GGG | + | chr3.4:77914123-77914142 | MS.gene044336:intron | 30.0% | |
| CTTATACATGCTTATGCTAT+AGG | + | chr3.4:77912854-77912873 | MS.gene044336:intron | 30.0% | |
| GAATTCACAAAGATAGTAAG+TGG | - | chr3.4:77915818-77915837 | None:intergenic | 30.0% | |
| GGATTATGATAAATCGTCAA+AGG | + | chr3.4:77915211-77915230 | MS.gene044336:CDS | 30.0% | |
| GTAATTACATCACATTGAAC+AGG | + | chr3.4:77914757-77914776 | MS.gene044336:intron | 30.0% | |
| GTGTTTATATTGGGAAGAAT+TGG | + | chr3.4:77913357-77913376 | MS.gene044336:intron | 30.0% | |
| GTTAAAAGTAGGAATAAGAG+TGG | - | chr3.4:77912283-77912302 | None:intergenic | 30.0% | |
| TAACCAAATGTGTGATTCTT+TGG | + | chr3.4:77915857-77915876 | MS.gene044336:intron | 30.0% | |
| TCAAATGGAAACAAACAACT+AGG | - | chr3.4:77916082-77916101 | None:intergenic | 30.0% | |
| TCAACCTTCTAAACTTGATT+TGG | + | chr3.4:77913079-77913098 | MS.gene044336:intron | 30.0% | |
| TGCTTGAAACTGAAATTAAG+AGG | - | chr3.4:77913854-77913873 | None:intergenic | 30.0% | |
| TGTTTCATATTTGAGAGAAG+TGG | + | chr3.4:77914979-77914998 | MS.gene044336:intron | 30.0% | |
| ! | ATCATATGGATTTGTTCCAA+AGG | + | chr3.4:77915497-77915516 | MS.gene044336:CDS | 30.0% |
| ! | CTGGTGTTTATGATTTTGTT+TGG | + | chr3.4:77913114-77913133 | MS.gene044336:intron | 30.0% |
| ! | GAAAGCACAGTAGATATATT+AGG | - | chr3.4:77914622-77914641 | None:intergenic | 30.0% |
| ! | TGTTTTCCTATAAGGATTAC+TGG | + | chr3.4:77915714-77915733 | MS.gene044336:CDS | 30.0% |
| !! | AAACTTGTTCTTTTCTATCC+AGG | - | chr3.4:77914069-77914088 | None:intergenic | 30.0% |
| !! | ACTTTTGTACCATTTTAGGA+TGG | - | chr3.4:77913641-77913660 | None:intergenic | 30.0% |
| !! | ATAGCTTTGAAAACAGCTTA+TGG | + | chr3.4:77912682-77912701 | MS.gene044336:intron | 30.0% |
| !! | CTTCACTTTTGTACCATTTT+AGG | - | chr3.4:77913645-77913664 | None:intergenic | 30.0% |
| !! | CTTTAGAGTCATAAACACTT+TGG | - | chr3.4:77915376-77915395 | None:intergenic | 30.0% |
| !! | GCTTTGAAGAATATTAGGAA+AGG | + | chr3.4:77912522-77912541 | MS.gene044336:CDS | 30.0% |
| !! | GGTGTTTATGATTTTGTTTG+GGG | + | chr3.4:77913116-77913135 | MS.gene044336:intron | 30.0% |
| !! | TATTAGAGTTCAACTTGTTG+AGG | - | chr3.4:77915156-77915175 | None:intergenic | 30.0% |
| !! | TCCATTGATAAAGTTGATGT+TGG | + | chr3.4:77912483-77912502 | MS.gene044336:CDS | 30.0% |
| !! | TGAAAATCTTTAATGGGTTC+TGG | + | chr3.4:77916371-77916390 | MS.gene044336:CDS | 30.0% |
| !! | TGATTTTGTTTGGGGTATTT+TGG | + | chr3.4:77913124-77913143 | MS.gene044336:intron | 30.0% |
| !!! | AACTTGCTAGGGATTTTATT+TGG | - | chr3.4:77915131-77915150 | None:intergenic | 30.0% |
| !!! | ATTCACCAGGGTTTTAAAAA+AGG | + | chr3.4:77913485-77913504 | MS.gene044336:intron | 30.0% |
| !!! | CTTTTGTACCATTTTAGGAT+GGG | - | chr3.4:77913640-77913659 | None:intergenic | 30.0% |
| !!! | GTGTTGTTTTGTGAATTGTT+TGG | - | chr3.4:77912305-77912324 | None:intergenic | 30.0% |
| !!! | TTTGGGGTATTTTGGTTATT+AGG | + | chr3.4:77913132-77913151 | MS.gene044336:intron | 30.0% |
| !!! | TTTTTTGTCATTGGATTAGG+TGG | + | chr3.4:77915178-77915197 | MS.gene044336:intron | 30.0% |
| AAAAGGATCGAAGTAACAGT+TGG | + | chr3.4:77913502-77913521 | MS.gene044336:intron | 35.0% | |
| AAAAGTAGGAATAAGAGTGG+TGG | - | chr3.4:77912280-77912299 | None:intergenic | 35.0% | |
| AAAGGGAATTGTCTTTACGA+CGG | + | chr3.4:77915229-77915248 | MS.gene044336:CDS | 35.0% | |
| AACCATACTCACTTCTTTAC+TGG | + | chr3.4:77913296-77913315 | MS.gene044336:CDS | 35.0% | |
| AACCCTCATATCATTGTATC+TGG | - | chr3.4:77914698-77914717 | None:intergenic | 35.0% | |
| AAGGAAGAGTTTACAGAATC+AGG | - | chr3.4:77912588-77912607 | None:intergenic | 35.0% | |
| ACCAATACGGTATCTTTAGA+CGG | + | chr3.4:77914398-77914417 | MS.gene044336:intron | 35.0% | |
| ACCTATCAAAATAAGGGTTC+CGG | + | chr3.4:77914129-77914148 | MS.gene044336:intron | 35.0% | |
| AGCGACAAACTTGTGAAAAT+AGG | + | chr3.4:77914092-77914111 | MS.gene044336:intron | 35.0% | |
| ATAAGGTAAGTTGCAAGCAA+TGG | - | chr3.4:77913214-77913233 | None:intergenic | 35.0% | |
| ATGAATCATAGTTGTGAGGT+AGG | + | chr3.4:77915099-77915118 | MS.gene044336:intron | 35.0% | |
| CAGGTAATCATAAACTCAGA+TGG | + | chr3.4:77915275-77915294 | MS.gene044336:intron | 35.0% | |
| CATGAGAGGAAAATTTGAAG+AGG | + | chr3.4:77915788-77915807 | MS.gene044336:CDS | 35.0% | |
| CATGATGAATCATAGTTGTG+AGG | + | chr3.4:77915095-77915114 | MS.gene044336:CDS | 35.0% | |
| CATTGATGGAAACTATTCCT+TGG | + | chr3.4:77912379-77912398 | MS.gene044336:CDS | 35.0% | |
| CATTGTATCTGGAGAACAAA+TGG | - | chr3.4:77914687-77914706 | None:intergenic | 35.0% | |
| CGATATATAACTGAACCATC+TGG | - | chr3.4:77913263-77913282 | None:intergenic | 35.0% | |
| CTATCTATGCACTATGCTTA+TGG | - | chr3.4:77912788-77912807 | None:intergenic | 35.0% | |
| CTCCAGATACAATGATATGA+GGG | + | chr3.4:77914693-77914712 | MS.gene044336:intron | 35.0% | |
| CTTGAGATATCCTGAAATAG+AGG | + | chr3.4:77915925-77915944 | MS.gene044336:CDS | 35.0% | |
| GAAAGAAATAACAAACCCGT+GGG | + | chr3.4:77914241-77914260 | MS.gene044336:intron | 35.0% | |
| GATAAGACAGTTAAGTACCT+TGG | + | chr3.4:77915321-77915340 | MS.gene044336:intron | 35.0% | |
| GATTTGGATATCTTGTGTTC+TGG | + | chr3.4:77913095-77913114 | MS.gene044336:intron | 35.0% | |
| GCGACAAACCTATCAAAATA+AGG | + | chr3.4:77914122-77914141 | MS.gene044336:intron | 35.0% | |
| GCGACAAACTTGTGAAAATA+GGG | + | chr3.4:77914093-77914112 | MS.gene044336:intron | 35.0% | |
| GTGATGTAATTACCTCTTCA+GGG | - | chr3.4:77914750-77914769 | None:intergenic | 35.0% | |
| TACCAGTAAAGAAGTGAGTA+TGG | - | chr3.4:77913301-77913320 | None:intergenic | 35.0% | |
| TATAGGAAAACACTGAGATC+TGG | - | chr3.4:77915706-77915725 | None:intergenic | 35.0% | |
| TATGGATGGAAAGAATGCAT+TGG | + | chr3.4:77915059-77915078 | MS.gene044336:CDS | 35.0% | |
| TCTCCAGATACAATGATATG+AGG | + | chr3.4:77914692-77914711 | MS.gene044336:intron | 35.0% | |
| TCTTGTACGGATATAGATGA+AGG | - | chr3.4:77913776-77913795 | None:intergenic | 35.0% | |
| TGAAAGAAATAACAAACCCG+TGG | + | chr3.4:77914240-77914259 | MS.gene044336:intron | 35.0% | |
| TGAATCATAGTTGTGAGGTA+GGG | + | chr3.4:77915100-77915119 | MS.gene044336:intron | 35.0% | |
| TGTCCAAAGAATCACACATT+TGG | - | chr3.4:77915863-77915882 | None:intergenic | 35.0% | |
| TGTGATGTAATTACCTCTTC+AGG | - | chr3.4:77914751-77914770 | None:intergenic | 35.0% | |
| TTCCTATAAGGATTACTGGT+TGG | + | chr3.4:77915718-77915737 | MS.gene044336:CDS | 35.0% | |
| TTGATGGAAACTATTCCTTG+GGG | + | chr3.4:77912381-77912400 | MS.gene044336:CDS | 35.0% | |
| ! | AAATGCTTTGTTACCTTGCT+AGG | + | chr3.4:77913422-77913441 | MS.gene044336:intron | 35.0% |
| ! | AATGAAAAAGTGTGCCTCTT+AGG | + | chr3.4:77914194-77914213 | MS.gene044336:intron | 35.0% |
| ! | AATGCTTTGTTACCTTGCTA+GGG | + | chr3.4:77913423-77913442 | MS.gene044336:intron | 35.0% |
| ! | AATTTTCCTCTCATGCTTGA+AGG | - | chr3.4:77915783-77915802 | None:intergenic | 35.0% |
| ! | AGTCTTCTGTTGAGTTGTTT+CGG | - | chr3.4:77916149-77916168 | None:intergenic | 35.0% |
| ! | ATATGGATTTGTTCCAAAGG+AGG | + | chr3.4:77915500-77915519 | MS.gene044336:CDS | 35.0% |
| ! | ATGAGGACTGGTGAATTAAA+AGG | + | chr3.4:77916346-77916365 | MS.gene044336:CDS | 35.0% |
| ! | CAGTTCTAACTTCTCCTTAT+AGG | - | chr3.4:77915583-77915602 | None:intergenic | 35.0% |
| ! | CGAGATTTTCTCTCAATTTC+TGG | - | chr3.4:77914161-77914180 | None:intergenic | 35.0% |
| ! | CTGTTATTTGTATGGCTTTC+AGG | + | chr3.4:77914820-77914839 | MS.gene044336:intron | 35.0% |
| ! | GATCTCAGTGTTTTCCTATA+AGG | + | chr3.4:77915706-77915725 | MS.gene044336:intron | 35.0% |
| ! | TATGGATTTGTTCCAAAGGA+GGG | + | chr3.4:77915501-77915520 | MS.gene044336:CDS | 35.0% |
| !! | AAAGAATGCATTGGTTCCTT+GGG | + | chr3.4:77915068-77915087 | MS.gene044336:CDS | 35.0% |
| !! | ATATCTCAAGTCCTTTTTCG+AGG | - | chr3.4:77915915-77915934 | None:intergenic | 35.0% |
| !! | ATTAGCTGTTTCTCTGATGT+AGG | - | chr3.4:77914362-77914381 | None:intergenic | 35.0% |
| !! | GATTTTCTCTCAATTTCTGG+TGG | - | chr3.4:77914158-77914177 | None:intergenic | 35.0% |
| !! | TGAGACTAGCTTCACTTATA+AGG | - | chr3.4:77913231-77913250 | None:intergenic | 35.0% |
| !! | TTGTTGAGGAAAACTTGCTA+GGG | - | chr3.4:77915142-77915161 | None:intergenic | 35.0% |
| !!! | CGAGGTAGTTTTATTTGATG+CGG | - | chr3.4:77915897-77915916 | None:intergenic | 35.0% |
| !!! | GGTATTTTGGTTATTAGGAG+TGG | + | chr3.4:77913137-77913156 | MS.gene044336:intron | 35.0% |
| !!! | TCGATCCTTTTTTAAAACCC+TGG | - | chr3.4:77913493-77913512 | None:intergenic | 35.0% |
| AATGCCGAATGACCATTTGA+AGG | - | chr3.4:77914861-77914880 | None:intergenic | 40.0% | |
| AATGCTTGCTCCTCTATTTC+AGG | - | chr3.4:77915938-77915957 | None:intergenic | 40.0% | |
| ACAACAAGTTCTTACAGGCA+AGG | + | chr3.4:77915999-77916018 | MS.gene044336:intron | 40.0% | |
| ACCGTCTAAAGATACCGTAT+TGG | - | chr3.4:77914402-77914421 | None:intergenic | 40.0% | |
| ACTTGGAAGCTTCACAGATT+AGG | + | chr3.4:77914538-77914557 | MS.gene044336:CDS | 40.0% | |
| AGAGAAACACCTCTCTTGTA+CGG | - | chr3.4:77913789-77913808 | None:intergenic | 40.0% | |
| AGATATTGCGAAGAAGACTG+AGG | + | chr3.4:77916320-77916339 | MS.gene044336:intron | 40.0% | |
| CAGAACTTATGTAGCCTAAG+AGG | - | chr3.4:77914211-77914230 | None:intergenic | 40.0% | |
| CATCTATATCCGTACAAGAG+AGG | + | chr3.4:77913777-77913796 | MS.gene044336:intron | 40.0% | |
| CTGCATTCTCTGCAATATCA+AGG | - | chr3.4:77913540-77913559 | None:intergenic | 40.0% | |
| CTTCTCCTTATAGGACTCAT+CGG | - | chr3.4:77915574-77915593 | None:intergenic | 40.0% | |
| CTTGGAAGCTTCACAGATTA+GGG | + | chr3.4:77914539-77914558 | MS.gene044336:CDS | 40.0% | |
| GAAATCCGATGAGTCCTATA+AGG | + | chr3.4:77915566-77915585 | MS.gene044336:CDS | 40.0% | |
| GACAACTCAACTGAATCACT+TGG | - | chr3.4:77915534-77915553 | None:intergenic | 40.0% | |
| GAGTCATAAACACTTTGGCA+AGG | - | chr3.4:77915371-77915390 | None:intergenic | 40.0% | |
| GAGTCCTTCAAATGGTCATT+CGG | + | chr3.4:77914854-77914873 | MS.gene044336:CDS | 40.0% | |
| GATATTGCGAAGAAGACTGA+GGG | + | chr3.4:77916321-77916340 | MS.gene044336:intron | 40.0% | |
| GCATAAGCCATTAACTCCAA+TGG | - | chr3.4:77915744-77915763 | None:intergenic | 40.0% | |
| GCATTCTTTCCATCCATAGA+GGG | - | chr3.4:77915057-77915076 | None:intergenic | 40.0% | |
| GTCTCATGAAATCTTCCAGA+TGG | + | chr3.4:77913245-77913264 | MS.gene044336:CDS | 40.0% | |
| TCAACATCGAGTCCTTCAAA+TGG | + | chr3.4:77914846-77914865 | MS.gene044336:CDS | 40.0% | |
| TCGTCACATAACTGTCTATG+AGG | - | chr3.4:77912910-77912929 | None:intergenic | 40.0% | |
| TGCATTCTTTCCATCCATAG+AGG | - | chr3.4:77915058-77915077 | None:intergenic | 40.0% | |
| TGTGTGATTCTTTGGACAGA+TGG | + | chr3.4:77915865-77915884 | MS.gene044336:intron | 40.0% | |
| TTACCTGTGGATCGATCAAA+TGG | - | chr3.4:77916097-77916116 | None:intergenic | 40.0% | |
| TTACGTGACTATGAGAGAGA+GGG | + | chr3.4:77913997-77914016 | MS.gene044336:intron | 40.0% | |
| TTAGGGAGAGAGCAATTGAA+AGG | + | chr3.4:77914556-77914575 | MS.gene044336:CDS | 40.0% | |
| TTCAATACTTCACCAGCTTC+CGG | - | chr3.4:77913169-77913188 | None:intergenic | 40.0% | |
| TTTACGTGACTATGAGAGAG+AGG | + | chr3.4:77913996-77914015 | MS.gene044336:intron | 40.0% | |
| TTTATGATTACCTGCTCACC+TGG | - | chr3.4:77915269-77915288 | None:intergenic | 40.0% | |
| TTTCCATTTGATCGATCCAC+AGG | + | chr3.4:77916091-77916110 | MS.gene044336:intron | 40.0% | |
| ! | AGGGAAGAAATCAGGGTATT+TGG | - | chr3.4:77914731-77914750 | None:intergenic | 40.0% |
| ! | CTTGTTGAGGAAAACTTGCT+AGG | - | chr3.4:77915143-77915162 | None:intergenic | 40.0% |
| ! | GTCTTCTGTTGAGTTGTTTC+GGG | - | chr3.4:77916148-77916167 | None:intergenic | 40.0% |
| ! | TCAATGGACATCTTCTGAGA+AGG | - | chr3.4:77912471-77912490 | None:intergenic | 40.0% |
| ! | TCTTCTGTTGAGTTGTTTCG+GGG | - | chr3.4:77916147-77916166 | None:intergenic | 40.0% |
| !! | AAAGTTGATGTTGGTGAGAG+AGG | + | chr3.4:77912492-77912511 | MS.gene044336:CDS | 40.0% |
| !! | GAAAGAATGCATTGGTTCCT+TGG | + | chr3.4:77915067-77915086 | MS.gene044336:CDS | 40.0% |
| !! | TCTCAATTTCTGGTGGATTC+CGG | - | chr3.4:77914151-77914170 | None:intergenic | 40.0% |
| !!! | GGATTAGGTGGAGACTTTTT+TGG | + | chr3.4:77915190-77915209 | MS.gene044336:intron | 40.0% |
| !!! | GGTAGTTTTATTTGATGCGG+CGG | - | chr3.4:77915894-77915913 | None:intergenic | 40.0% |
| !!! | TCCGGAACCCTTATTTTGAT+AGG | - | chr3.4:77914133-77914152 | None:intergenic | 40.0% |
| ACCTCTTCAGGGAAGAAATC+AGG | - | chr3.4:77914739-77914758 | None:intergenic | 45.0% | |
| AGAAGTGAGTATGGTTGACG+AGG | - | chr3.4:77913292-77913311 | None:intergenic | 45.0% | |
| AGCAGAACTAGATCGCTACT+TGG | + | chr3.4:77914521-77914540 | MS.gene044336:CDS | 45.0% | |
| ATATTGGCACCGTGTAGGTT+CGG | + | chr3.4:77915028-77915047 | MS.gene044336:intron | 45.0% | |
| ATCTCACATTCTCCCTAGCA+AGG | - | chr3.4:77913438-77913457 | None:intergenic | 45.0% | |
| CCTCTTCAGGGAAGAAATCA+GGG | - | chr3.4:77914738-77914757 | None:intergenic | 45.0% | |
| CTCTGCAACCTCATCATTGA+TGG | + | chr3.4:77912365-77912384 | MS.gene044336:CDS | 45.0% | |
| GAAGAAGACTGAGGGATATG+AGG | + | chr3.4:77916329-77916348 | MS.gene044336:CDS | 45.0% | |
| GAATCATTCTCACATCCCCA+AGG | - | chr3.4:77912399-77912418 | None:intergenic | 45.0% | |
| GAGAAATGGTTGTCTCAGTC+AGG | + | chr3.4:77912441-77912460 | MS.gene044336:CDS | 45.0% | |
| GCAGAGAATGCAGTCAAATG+TGG | + | chr3.4:77913547-77913566 | MS.gene044336:intron | 45.0% | |
| GGCCAACCAGTAATCCTTAT+AGG | - | chr3.4:77915723-77915742 | None:intergenic | 45.0% | |
| GGGGAGCTTCTGTTATCATA+TGG | + | chr3.4:77915483-77915502 | MS.gene044336:CDS | 45.0% | |
| GGTAAGTGGATCGCTAGATT+TGG | + | chr3.4:77916112-77916131 | MS.gene044336:intron | 45.0% | |
| GTTAGTCCTTCAAGCATGAG+AGG | + | chr3.4:77915774-77915793 | MS.gene044336:CDS | 45.0% | |
| TCAATACTTCACCAGCTTCC+GGG | - | chr3.4:77913168-77913187 | None:intergenic | 45.0% | |
| TCAGGAGTGATGACAAGTTC+AGG | - | chr3.4:77912570-77912589 | None:intergenic | 45.0% | |
| TCATGATATTGGCACCGTGT+AGG | + | chr3.4:77915023-77915042 | MS.gene044336:intron | 45.0% | |
| TGATTCATCATGTCTGCCCA+AGG | - | chr3.4:77915087-77915106 | None:intergenic | 45.0% | |
| TTGATCGATCCACAGGTAAG+TGG | + | chr3.4:77916098-77916117 | MS.gene044336:intron | 45.0% | |
| ! | AAGGATTACTGGTTGGCCAT+TGG | + | chr3.4:77915725-77915744 | MS.gene044336:CDS | 45.0% |
| ! | AGGAATAAGAGTGGTGGTGT+TGG | - | chr3.4:77912274-77912293 | None:intergenic | 45.0% |
| ! | TGGTTGGCCATTGGAGTTAA+TGG | + | chr3.4:77915734-77915753 | MS.gene044336:CDS | 45.0% |
| !! | AGCTGTTTCTCTGATGTAGG+AGG | - | chr3.4:77914359-77914378 | None:intergenic | 45.0% |
| !! | CTTTCTAAAGCAGCTAGCAG+TGG | + | chr3.4:77916169-77916188 | MS.gene044336:CDS | 45.0% |
| !! | GCTGTTTCTCTGATGTAGGA+GGG | - | chr3.4:77914358-77914377 | None:intergenic | 45.0% |
| ACTGTCTATGAGGCCCTGTT+TGG | - | chr3.4:77912900-77912919 | None:intergenic | 50.0% | |
| ACTTGTGTAATAGCGAGCGC+AGG | + | chr3.4:77916192-77916211 | MS.gene044336:CDS | 50.0% | |
| AGACTGAGGGATATGAGGAC+TGG | + | chr3.4:77916334-77916353 | MS.gene044336:CDS | 50.0% | |
| CCCTGATTTCTTCCCTGAAG+AGG | + | chr3.4:77914735-77914754 | MS.gene044336:CDS | 50.0% | |
| GGAGAGAGAATGACGCAGTA+CGG | + | chr3.4:77914018-77914037 | MS.gene044336:intron | 50.0% | |
| GGAGTGATGACAAGTTCAGG+AGG | - | chr3.4:77912567-77912586 | None:intergenic | 50.0% | |
| GTCAAATGTGGCCTCAATCG+CGG | + | chr3.4:77913559-77913578 | MS.gene044336:intron | 50.0% | |
| GTTGCAAGCAATGGCCAATC+TGG | - | chr3.4:77913205-77913224 | None:intergenic | 50.0% | |
| TACCTGCTCACCTGGTTGAT+AGG | - | chr3.4:77915261-77915280 | None:intergenic | 50.0% | |
| TCTAGCGATCCACTTACCTG+TGG | - | chr3.4:77916110-77916129 | None:intergenic | 50.0% | |
| TTATTAGGAGTGGAGCTGCC+CGG | + | chr3.4:77913147-77913166 | MS.gene044336:intron | 50.0% | |
| ! | ACCTGCTCACCTGGTTGATA+GGG | - | chr3.4:77915260-77915279 | None:intergenic | 50.0% |
| ACGGATCGTCCCTATCAACC+AGG | + | chr3.4:77915248-77915267 | MS.gene044336:CDS | 55.0% | |
| AGAGGGCAACCGAACCTACA+CGG | - | chr3.4:77915040-77915059 | None:intergenic | 55.0% | |
| CTTGGATTCGTGCCCTCCTT+TGG | - | chr3.4:77915516-77915535 | None:intergenic | 55.0% | |
| GTTCGGTTGCCCTCTATGGA+TGG | + | chr3.4:77915045-77915064 | MS.gene044336:CDS | 55.0% | |
| TCCCTATCAACCAGGTGAGC+AGG | + | chr3.4:77915256-77915275 | MS.gene044336:CDS | 55.0% | |
| TCGCGCATGGTGAGTCAATC+TGG | + | chr3.4:77914887-77914906 | MS.gene044336:intron | 55.0% | |
| ! | ATGACGCAGTACGGAAGCGT+AGG | + | chr3.4:77914027-77914046 | MS.gene044336:intron | 55.0% |
| ! | CGGCATTCTTTTCTCGCGCA+TGG | + | chr3.4:77914874-77914893 | MS.gene044336:CDS | 55.0% |
| ! | GGGTTAGCAAGCGCTAAACC+TGG | + | chr3.4:77914048-77914067 | MS.gene044336:intron | 55.0% |
| ! | GTAGGTTCGGTTGCCCTCTA+TGG | + | chr3.4:77915041-77915060 | MS.gene044336:intron | 55.0% |
| ! | TGACGCAGTACGGAAGCGTA+GGG | + | chr3.4:77914028-77914047 | MS.gene044336:intron | 55.0% |
| GCCTCAATCGCGGTCAGCTG+CGG | + | chr3.4:77913569-77913588 | MS.gene044336:intron | 65.0% | |
| GAGTGGAGCTGCCCGGAAGC+TGG | + | chr3.4:77913154-77913173 | MS.gene044336:CDS | 70.0% | |
| GCCGCAGCTGACCGCGATTG+AGG | - | chr3.4:77913573-77913592 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 77912240 | 77916408 | 77912240 | ID=MS.gene044336 |
| chr3.4 | mRNA | 77912240 | 77916408 | 77912240 | ID=MS.gene044336.t1;Parent=MS.gene044336 |
| chr3.4 | exon | 77912240 | 77912593 | 77912240 | ID=MS.gene044336.t1.exon1;Parent=MS.gene044336.t1 |
| chr3.4 | CDS | 77912240 | 77912593 | 77912240 | ID=cds.MS.gene044336.t1;Parent=MS.gene044336.t1 |
| chr3.4 | exon | 77913154 | 77913317 | 77913154 | ID=MS.gene044336.t1.exon2;Parent=MS.gene044336.t1 |
| chr3.4 | CDS | 77913154 | 77913317 | 77913154 | ID=cds.MS.gene044336.t1;Parent=MS.gene044336.t1 |
| chr3.4 | exon | 77914515 | 77914598 | 77914515 | ID=MS.gene044336.t1.exon3;Parent=MS.gene044336.t1 |
| chr3.4 | CDS | 77914515 | 77914598 | 77914515 | ID=cds.MS.gene044336.t1;Parent=MS.gene044336.t1 |
| chr3.4 | exon | 77914699 | 77914756 | 77914699 | ID=MS.gene044336.t1.exon4;Parent=MS.gene044336.t1 |
| chr3.4 | CDS | 77914699 | 77914756 | 77914699 | ID=cds.MS.gene044336.t1;Parent=MS.gene044336.t1 |
| chr3.4 | exon | 77914842 | 77914895 | 77914842 | ID=MS.gene044336.t1.exon5;Parent=MS.gene044336.t1 |
| chr3.4 | CDS | 77914842 | 77914895 | 77914842 | ID=cds.MS.gene044336.t1;Parent=MS.gene044336.t1 |
| chr3.4 | exon | 77915045 | 77915116 | 77915045 | ID=MS.gene044336.t1.exon6;Parent=MS.gene044336.t1 |
| chr3.4 | CDS | 77915045 | 77915116 | 77915045 | ID=cds.MS.gene044336.t1;Parent=MS.gene044336.t1 |
| chr3.4 | exon | 77915197 | 77915277 | 77915197 | ID=MS.gene044336.t1.exon7;Parent=MS.gene044336.t1 |
| chr3.4 | CDS | 77915197 | 77915277 | 77915197 | ID=cds.MS.gene044336.t1;Parent=MS.gene044336.t1 |
| chr3.4 | exon | 77915453 | 77915625 | 77915453 | ID=MS.gene044336.t1.exon8;Parent=MS.gene044336.t1 |
| chr3.4 | CDS | 77915453 | 77915625 | 77915453 | ID=cds.MS.gene044336.t1;Parent=MS.gene044336.t1 |
| chr3.4 | exon | 77915707 | 77915809 | 77915707 | ID=MS.gene044336.t1.exon9;Parent=MS.gene044336.t1 |
| chr3.4 | CDS | 77915707 | 77915809 | 77915707 | ID=cds.MS.gene044336.t1;Parent=MS.gene044336.t1 |
| chr3.4 | exon | 77915884 | 77916015 | 77915884 | ID=MS.gene044336.t1.exon10;Parent=MS.gene044336.t1 |
| chr3.4 | CDS | 77915884 | 77916015 | 77915884 | ID=cds.MS.gene044336.t1;Parent=MS.gene044336.t1 |
| chr3.4 | exon | 77916113 | 77916235 | 77916113 | ID=MS.gene044336.t1.exon11;Parent=MS.gene044336.t1 |
| chr3.4 | CDS | 77916113 | 77916235 | 77916113 | ID=cds.MS.gene044336.t1;Parent=MS.gene044336.t1 |
| chr3.4 | exon | 77916322 | 77916408 | 77916322 | ID=MS.gene044336.t1.exon12;Parent=MS.gene044336.t1 |
| chr3.4 | CDS | 77916322 | 77916408 | 77916322 | ID=cds.MS.gene044336.t1;Parent=MS.gene044336.t1 |
| Gene Sequence |
| Protein sequence |
