Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044433.t1 | XP_013457964.1 | 94.2 | 520 | 19 | 5 | 1 | 513 | 1 | 516 | 3.60E-247 | 864 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044433.t1 | Q9M202 | 40.8 | 157 | 54 | 5 | 338 | 491 | 164 | 284 | 4.9e-19 | 97.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044433.t1 | A0A072V1J8 | 94.2 | 520 | 19 | 5 | 1 | 513 | 1 | 516 | 2.6e-247 | 864.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene044433.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044433.t1 | MTR_4g109340 | 95.000 | 520 | 15 | 5 | 1 | 513 | 1 | 516 | 0.0 | 993 |
| MS.gene044433.t1 | MTR_3g023760 | 38.009 | 442 | 189 | 17 | 1 | 396 | 1 | 403 | 2.04e-58 | 201 |
| MS.gene044433.t1 | MTR_3g023760 | 34.132 | 167 | 69 | 6 | 379 | 513 | 307 | 464 | 1.24e-15 | 79.7 |
| MS.gene044433.t1 | MTR_4g028610 | 38.889 | 162 | 75 | 5 | 344 | 485 | 224 | 381 | 3.87e-25 | 108 |
| MS.gene044433.t1 | MTR_4g028610 | 26.649 | 379 | 215 | 15 | 4 | 369 | 6 | 334 | 6.09e-15 | 77.8 |
| MS.gene044433.t1 | MTR_0160s0030 | 37.059 | 170 | 63 | 4 | 330 | 494 | 218 | 348 | 7.77e-25 | 106 |
| MS.gene044433.t1 | MTR_4g027440 | 39.103 | 156 | 53 | 6 | 344 | 484 | 217 | 345 | 1.21e-21 | 97.1 |
| MS.gene044433.t1 | MTR_5g099040 | 46.491 | 114 | 47 | 5 | 346 | 454 | 129 | 233 | 2.58e-19 | 88.6 |
| MS.gene044433.t1 | MTR_5g062300 | 44.643 | 112 | 36 | 5 | 346 | 454 | 118 | 206 | 9.79e-18 | 83.2 |
| MS.gene044433.t1 | MTR_4g082980 | 30.705 | 241 | 139 | 6 | 10 | 233 | 7 | 236 | 1.55e-17 | 85.5 |
| MS.gene044433.t1 | MTR_4g082980 | 50.000 | 58 | 27 | 1 | 432 | 487 | 393 | 450 | 1.65e-12 | 70.1 |
| MS.gene044433.t1 | MTR_1g090703 | 37.342 | 158 | 73 | 6 | 347 | 487 | 156 | 304 | 1.68e-15 | 78.6 |
| MS.gene044433.t1 | MTR_1g018420 | 38.356 | 146 | 54 | 7 | 347 | 486 | 81 | 196 | 1.19e-14 | 73.9 |
| MS.gene044433.t1 | MTR_2g084315 | 29.565 | 230 | 126 | 7 | 292 | 491 | 58 | 281 | 2.28e-14 | 74.3 |
| MS.gene044433.t1 | MTR_4g057230 | 38.562 | 153 | 82 | 3 | 347 | 487 | 113 | 265 | 4.79e-14 | 73.2 |
| MS.gene044433.t1 | MTR_1g062780 | 33.503 | 197 | 98 | 8 | 327 | 498 | 92 | 280 | 3.12e-13 | 70.9 |
| MS.gene044433.t1 | MTR_4g100860 | 28.279 | 244 | 134 | 9 | 281 | 490 | 72 | 308 | 1.02e-12 | 69.7 |
| MS.gene044433.t1 | MTR_4g100860 | 31.414 | 191 | 111 | 7 | 10 | 199 | 3 | 174 | 2.48e-11 | 65.5 |
| MS.gene044433.t1 | MTR_3g102980 | 35.172 | 145 | 55 | 5 | 348 | 483 | 87 | 201 | 1.72e-12 | 67.8 |
| MS.gene044433.t1 | MTR_1g106730 | 40.187 | 107 | 27 | 4 | 348 | 454 | 84 | 153 | 8.25e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044433.t1 | AT2G45120 | 46.429 | 168 | 46 | 8 | 330 | 491 | 179 | 308 | 3.70e-30 | 120 |
| MS.gene044433.t1 | AT3G60580 | 41.216 | 148 | 48 | 5 | 344 | 488 | 170 | 281 | 6.65e-24 | 102 |
| MS.gene044433.t1 | AT4G35280 | 36.986 | 146 | 57 | 2 | 346 | 491 | 161 | 271 | 1.62e-21 | 95.1 |
| MS.gene044433.t1 | AT1G02030 | 43.624 | 149 | 38 | 5 | 343 | 488 | 155 | 260 | 2.85e-21 | 94.0 |
| MS.gene044433.t1 | AT1G26590 | 27.820 | 399 | 196 | 13 | 1 | 369 | 1 | 337 | 6.30e-18 | 85.9 |
| MS.gene044433.t1 | AT1G26590 | 27.820 | 399 | 196 | 13 | 1 | 369 | 1 | 337 | 6.30e-18 | 85.9 |
| MS.gene044433.t1 | AT1G26590 | 27.820 | 399 | 196 | 13 | 1 | 369 | 1 | 337 | 6.30e-18 | 85.9 |
| MS.gene044433.t1 | AT2G17180 | 39.310 | 145 | 54 | 6 | 346 | 489 | 147 | 258 | 1.11e-17 | 83.6 |
| MS.gene044433.t1 | AT1G26590 | 27.820 | 399 | 196 | 13 | 1 | 369 | 19 | 355 | 1.15e-17 | 85.5 |
| MS.gene044433.t1 | AT1G02040 | 38.926 | 149 | 75 | 3 | 347 | 489 | 150 | 288 | 3.19e-17 | 83.2 |
| MS.gene044433.t1 | AT5G03510 | 36.306 | 157 | 75 | 5 | 345 | 487 | 116 | 261 | 2.17e-15 | 77.4 |
| MS.gene044433.t1 | AT2G28200 | 38.125 | 160 | 62 | 7 | 347 | 483 | 115 | 260 | 2.70e-15 | 77.0 |
| MS.gene044433.t1 | AT1G26610 | 55.385 | 65 | 27 | 2 | 424 | 487 | 392 | 455 | 7.17e-15 | 77.4 |
| MS.gene044433.t1 | AT5G04390 | 42.727 | 110 | 50 | 5 | 347 | 454 | 153 | 251 | 2.10e-14 | 75.1 |
| MS.gene044433.t1 | AT5G67450 | 34.375 | 160 | 63 | 6 | 347 | 483 | 97 | 237 | 1.02e-12 | 68.6 |
| MS.gene044433.t1 | AT5G56200 | 38.281 | 128 | 60 | 3 | 344 | 471 | 339 | 447 | 3.82e-12 | 68.9 |
| MS.gene044433.t1 | AT3G10470 | 36.111 | 108 | 63 | 2 | 347 | 454 | 182 | 283 | 1.54e-11 | 66.6 |
Find 63 sgRNAs with CRISPR-Local
Find 74 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTTCTCCATGTCTTCTT+TGG | 0.075353 | 8.1:-16264243 | None:intergenic |
| AGGGAAAAGTTTAGAGATTT+TGG | 0.115530 | 8.1:+16264785 | MS.gene044433:CDS |
| CCCTTTGAACTTCAAATTCT+TGG | 0.126081 | 8.1:-16264766 | None:intergenic |
| CATTGAATATGTTCAAAATA+TGG | 0.183168 | 8.1:+16265250 | MS.gene044433:CDS |
| TGAGTGTCCAATTTGCTTTA+AGG | 0.196640 | 8.1:+16265316 | MS.gene044433:CDS |
| ATGCCCTTTAATCTTCTTCT+TGG | 0.204703 | 8.1:-16265291 | None:intergenic |
| TTTCCTTGTGGTAGATCTTT+AGG | 0.228997 | 8.1:+16264078 | MS.gene044433:CDS |
| CTACAAGTGCCTCTTGATTA+TGG | 0.245683 | 8.1:-16265535 | None:intergenic |
| ATGAGCTTGCTTTCAGTTGT+TGG | 0.246397 | 8.1:-16265209 | None:intergenic |
| CACTCATGGCAAGCTTTGTT+TGG | 0.289574 | 8.1:+16264333 | MS.gene044433:CDS |
| TCTTTCTCCATGTCTTCTTT+GGG | 0.291035 | 8.1:-16264242 | None:intergenic |
| AAGATTCAGAAGTTGAAAAT+AGG | 0.295282 | 8.1:+16264904 | MS.gene044433:CDS |
| AGAAAGAGTTTCTAACAGTT+TGG | 0.300359 | 8.1:+16264380 | MS.gene044433:CDS |
| GATTCCAAGAAGAAGATTAA+AGG | 0.330354 | 8.1:+16265287 | MS.gene044433:CDS |
| GAGAACAAGAAGTGTGAGTT+AGG | 0.363812 | 8.1:+16264732 | MS.gene044433:CDS |
| TTTCAATCTGGTCAAGCCTT+AGG | 0.371292 | 8.1:+16265341 | MS.gene044433:CDS |
| TTTCATTCTTATCAAGCTCT+TGG | 0.373280 | 8.1:+16265086 | MS.gene044433:CDS |
| AGGAACAAGTTCCGCAGATT+AGG | 0.373951 | 8.1:+16265420 | MS.gene044433:CDS |
| GGAACAAGTTCCGCAGATTA+GGG | 0.393219 | 8.1:+16265421 | MS.gene044433:CDS |
| TATCAAAGTCAGCTACTATA+AGG | 0.397815 | 8.1:+16264958 | MS.gene044433:CDS |
| ATTCCAAGAAGAAGATTAAA+GGG | 0.409460 | 8.1:+16265288 | MS.gene044433:CDS |
| GGATTCAAGATGATCAAAAC+TGG | 0.409796 | 8.1:+16264819 | MS.gene044433:CDS |
| ATTGAATATGTTCAAAATAT+GGG | 0.416959 | 8.1:+16265251 | MS.gene044433:CDS |
| CCAAGAATTTGAAGTTCAAA+GGG | 0.426487 | 8.1:+16264766 | MS.gene044433:CDS |
| GTTTGGAGGATCAAGATTCA+TGG | 0.428070 | 8.1:+16264397 | MS.gene044433:CDS |
| TCCAAGAATTTGAAGTTCAA+AGG | 0.432409 | 8.1:+16264765 | MS.gene044433:CDS |
| CATAATCAAGAGGCACTTGT+AGG | 0.439216 | 8.1:+16265536 | MS.gene044433:CDS |
| AAACTGGAGTTTGCATCAAA+GGG | 0.452059 | 8.1:+16264835 | MS.gene044433:CDS |
| AGCTTCTTCTTCTGTTTCTG+AGG | 0.456439 | 8.1:+16264527 | MS.gene044433:CDS |
| AAAACTGGAGTTTGCATCAA+AGG | 0.462834 | 8.1:+16264834 | MS.gene044433:CDS |
| GGTTCTGAAGCTGCAACTAA+TGG | 0.470954 | 8.1:+16264198 | MS.gene044433:CDS |
| CTTTCTTCCTCAGTAGCAGC+AGG | 0.478387 | 8.1:-16265464 | None:intergenic |
| TGGACATAAAAGATCTCATA+TGG | 0.479948 | 8.1:+16265364 | MS.gene044433:CDS |
| AATAGGAAAAGCAGAGTCAA+TGG | 0.482090 | 8.1:+16264921 | MS.gene044433:CDS |
| CATTCTTATCAAGCTCTTGG+AGG | 0.487098 | 8.1:+16265089 | MS.gene044433:CDS |
| AAGAGTTTCTAACAGTTTGG+AGG | 0.513244 | 8.1:+16264383 | MS.gene044433:CDS |
| AGATCTCATATGGTTGCTGC+TGG | 0.517678 | 8.1:+16265374 | MS.gene044433:CDS |
| AGACCTTGGTGGATAGTTGA+AGG | 0.528869 | 8.1:+16265509 | MS.gene044433:CDS |
| TAATCTTCCTGCTGCTACTG+AGG | 0.529053 | 8.1:+16265457 | MS.gene044433:CDS |
| GCTTGATTATCTGTCTACAT+TGG | 0.549776 | 8.1:+16264881 | MS.gene044433:CDS |
| TTAGTAGAGATGTTAGTCCT+TGG | 0.555862 | 8.1:+16264592 | MS.gene044433:CDS |
| GACAAATTCTGCAAAGAGTG+TGG | 0.556631 | 8.1:+16264300 | MS.gene044433:CDS |
| CTGATTCTAACAGACCTTGG+TGG | 0.557324 | 8.1:+16265498 | MS.gene044433:CDS |
| CAATCTGGTCAAGCCTTAGG+TGG | 0.558498 | 8.1:+16265344 | MS.gene044433:CDS |
| GCTGCAACTAATGGTAGCTA+TGG | 0.563432 | 8.1:+16264207 | MS.gene044433:CDS |
| GAGAGAACCCAAAGAAGACA+TGG | 0.571762 | 8.1:+16264235 | MS.gene044433:CDS |
| CCTTGTGGTAGATCTTTAGG+AGG | 0.573424 | 8.1:+16264081 | MS.gene044433:CDS |
| GTAAACAGAATTATTATCAG+AGG | 0.576383 | 8.1:-16264643 | None:intergenic |
| CAAGAGGCACTTGTAGGGTA+CGG | 0.590543 | 8.1:+16265542 | MS.gene044433:CDS |
| ATGCTGATTCTAACAGACCT+TGG | 0.596589 | 8.1:+16265495 | MS.gene044433:CDS |
| ATAATCAAGAGGCACTTGTA+GGG | 0.602596 | 8.1:+16265537 | MS.gene044433:CDS |
| TGAGAGTAGAGTTGTACTTG+AGG | 0.630352 | 8.1:+16265400 | MS.gene044433:CDS |
| AGATAATGAAGACCACTCCA+AGG | 0.644754 | 8.1:-16264609 | None:intergenic |
| TGATCATGATCATGATGATG+AGG | 0.648017 | 8.1:-16264996 | None:intergenic |
| GATCTTTAGGAGGTCACATG+AGG | 0.656622 | 8.1:+16264091 | MS.gene044433:CDS |
| TGAAGGCAACCATAATCAAG+AGG | 0.657701 | 8.1:+16265526 | MS.gene044433:CDS |
| CCTCCTAAAGATCTACCACA+AGG | 0.657873 | 8.1:-16264081 | None:intergenic |
| AACAAGAACAAGGTACAACA+TGG | 0.663025 | 8.1:+16264491 | MS.gene044433:CDS |
| AGAGATGTTAGTCCTTGGAG+TGG | 0.673173 | 8.1:+16264597 | MS.gene044433:CDS |
| TCAAGAAAGTCCCTAATCTG+CGG | 0.673237 | 8.1:-16265431 | None:intergenic |
| GATCAAAGAGAACAAGAACA+AGG | 0.701444 | 8.1:+16264481 | MS.gene044433:CDS |
| TGTAGCAAAAGCTTTCCTTG+TGG | 0.721402 | 8.1:+16264066 | MS.gene044433:CDS |
| TTGCCTTCAACTATCCACCA+AGG | 0.733273 | 8.1:-16265512 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGAATATGTTCAAAATAT+GGG | + | chr8.1:16265251-16265270 | MS.gene044433:CDS | 15.0% |
| !! | CATTGAATATGTTCAAAATA+TGG | + | chr8.1:16265250-16265269 | MS.gene044433:CDS | 20.0% |
| !!! | ATCAAGAATTTTAATAAGAG+AGG | + | chr8.1:16265032-16265051 | MS.gene044433:CDS | 20.0% |
| !!! | TTTGATCTTTTCTTTCTATT+TGG | - | chr8.1:16264468-16264487 | None:intergenic | 20.0% |
| ! | AAGATTCAGAAGTTGAAAAT+AGG | + | chr8.1:16264904-16264923 | MS.gene044433:CDS | 25.0% |
| ! | ACAAAAAAGAATGATAGCAT+TGG | + | chr8.1:16264177-16264196 | MS.gene044433:CDS | 25.0% |
| ! | ATTCCAAGAAGAAGATTAAA+GGG | + | chr8.1:16265288-16265307 | MS.gene044433:CDS | 25.0% |
| ! | CTAGTCATAAAAAGAACAAA+GGG | + | chr8.1:16265120-16265139 | MS.gene044433:CDS | 25.0% |
| ! | GTAAACAGAATTATTATCAG+AGG | - | chr8.1:16264646-16264665 | None:intergenic | 25.0% |
| ! | TGAAAAACCTTAAAGCAAAT+TGG | - | chr8.1:16265326-16265345 | None:intergenic | 25.0% |
| AGAAAGAGTTTCTAACAGTT+TGG | + | chr8.1:16264380-16264399 | MS.gene044433:CDS | 30.0% | |
| GATTCCAAGAAGAAGATTAA+AGG | + | chr8.1:16265287-16265306 | MS.gene044433:CDS | 30.0% | |
| GCTAGTCATAAAAAGAACAA+AGG | + | chr8.1:16265119-16265138 | MS.gene044433:CDS | 30.0% | |
| TATCAAAGTCAGCTACTATA+AGG | + | chr8.1:16264958-16264977 | MS.gene044433:CDS | 30.0% | |
| TGGACATAAAAGATCTCATA+TGG | + | chr8.1:16265364-16265383 | MS.gene044433:CDS | 30.0% | |
| TTTCATTCTTATCAAGCTCT+TGG | + | chr8.1:16265086-16265105 | MS.gene044433:CDS | 30.0% | |
| ! | AGGGAAAAGTTTAGAGATTT+TGG | + | chr8.1:16264785-16264804 | MS.gene044433:CDS | 30.0% |
| ! | ATAATCAAGCTCAGATTTTG+TGG | - | chr8.1:16264871-16264890 | None:intergenic | 30.0% |
| ! | CCAAGAATTTGAAGTTCAAA+GGG | + | chr8.1:16264766-16264785 | MS.gene044433:CDS | 30.0% |
| ! | TCCAAGAATTTGAAGTTCAA+AGG | + | chr8.1:16264765-16264784 | MS.gene044433:CDS | 30.0% |
| !!! | TGCTTTAAGGTTTTTCAATC+TGG | + | chr8.1:16265329-16265348 | MS.gene044433:CDS | 30.0% |
| AAAACTGGAGTTTGCATCAA+AGG | + | chr8.1:16264834-16264853 | MS.gene044433:CDS | 35.0% | |
| AAACTGGAGTTTGCATCAAA+GGG | + | chr8.1:16264835-16264854 | MS.gene044433:CDS | 35.0% | |
| AACAAGAACAAGGTACAACA+TGG | + | chr8.1:16264491-16264510 | MS.gene044433:CDS | 35.0% | |
| AAGAGTTTCTAACAGTTTGG+AGG | + | chr8.1:16264383-16264402 | MS.gene044433:CDS | 35.0% | |
| AATAGGAAAAGCAGAGTCAA+TGG | + | chr8.1:16264921-16264940 | MS.gene044433:CDS | 35.0% | |
| ATGCCCTTTAATCTTCTTCT+TGG | - | chr8.1:16265294-16265313 | None:intergenic | 35.0% | |
| CCCTTTGAACTTCAAATTCT+TGG | - | chr8.1:16264769-16264788 | None:intergenic | 35.0% | |
| GATCAAAGAGAACAAGAACA+AGG | + | chr8.1:16264481-16264500 | MS.gene044433:CDS | 35.0% | |
| GCTTGATTATCTGTCTACAT+TGG | + | chr8.1:16264881-16264900 | MS.gene044433:CDS | 35.0% | |
| GGATTCAAGATGATCAAAAC+TGG | + | chr8.1:16264819-16264838 | MS.gene044433:CDS | 35.0% | |
| TCTTTCTCCATGTCTTCTTT+GGG | - | chr8.1:16264245-16264264 | None:intergenic | 35.0% | |
| TTAGTAGAGATGTTAGTCCT+TGG | + | chr8.1:16264592-16264611 | MS.gene044433:CDS | 35.0% | |
| TTTCCTTGTGGTAGATCTTT+AGG | + | chr8.1:16264078-16264097 | MS.gene044433:CDS | 35.0% | |
| ! | AGATCTTTTATGTCCACCTA+AGG | - | chr8.1:16265360-16265379 | None:intergenic | 35.0% |
| ! | GAGATTTTGGATGCTGAAAA+AGG | + | chr8.1:16264798-16264817 | MS.gene044433:CDS | 35.0% |
| ! | GTGGAAAATGTTTTCACTCA+TGG | + | chr8.1:16264319-16264338 | MS.gene044433:CDS | 35.0% |
| ! | TGAGTGTCCAATTTGCTTTA+AGG | + | chr8.1:16265316-16265335 | MS.gene044433:CDS | 35.0% |
| ! | TGATCATGATCATGATGATG+AGG | - | chr8.1:16264999-16265018 | None:intergenic | 35.0% |
| !! | ATAATCAAGAGGCACTTGTA+GGG | + | chr8.1:16265537-16265556 | MS.gene044433:CDS | 35.0% |
| AGATAATGAAGACCACTCCA+AGG | - | chr8.1:16264612-16264631 | None:intergenic | 40.0% | |
| CATTCTTATCAAGCTCTTGG+AGG | + | chr8.1:16265089-16265108 | MS.gene044433:CDS | 40.0% | |
| CTACAAGTGCCTCTTGATTA+TGG | - | chr8.1:16265538-16265557 | None:intergenic | 40.0% | |
| CTCTTTCTCCATGTCTTCTT+TGG | - | chr8.1:16264246-16264265 | None:intergenic | 40.0% | |
| GACAAATTCTGCAAAGAGTG+TGG | + | chr8.1:16264300-16264319 | MS.gene044433:CDS | 40.0% | |
| GTTTGGAGGATCAAGATTCA+TGG | + | chr8.1:16264397-16264416 | MS.gene044433:CDS | 40.0% | |
| TCAAGAAAGTCCCTAATCTG+CGG | - | chr8.1:16265434-16265453 | None:intergenic | 40.0% | |
| TGAAGGCAACCATAATCAAG+AGG | + | chr8.1:16265526-16265545 | MS.gene044433:CDS | 40.0% | |
| TGAGAGTAGAGTTGTACTTG+AGG | + | chr8.1:16265400-16265419 | MS.gene044433:CDS | 40.0% | |
| TGTAGCAAAAGCTTTCCTTG+TGG | + | chr8.1:16264066-16264085 | MS.gene044433:CDS | 40.0% | |
| TTTCAATCTGGTCAAGCCTT+AGG | + | chr8.1:16265341-16265360 | MS.gene044433:CDS | 40.0% | |
| ! | ATGAGCTTGCTTTCAGTTGT+TGG | - | chr8.1:16265212-16265231 | None:intergenic | 40.0% |
| ! | GAGAACAAGAAGTGTGAGTT+AGG | + | chr8.1:16264732-16264751 | MS.gene044433:CDS | 40.0% |
| !! | AGCTTCTTCTTCTGTTTCTG+AGG | + | chr8.1:16264527-16264546 | MS.gene044433:CDS | 40.0% |
| !! | ATGCTGATTCTAACAGACCT+TGG | + | chr8.1:16265495-16265514 | MS.gene044433:CDS | 40.0% |
| !! | CATAATCAAGAGGCACTTGT+AGG | + | chr8.1:16265536-16265555 | MS.gene044433:CDS | 40.0% |
| AGAGATGTTAGTCCTTGGAG+TGG | + | chr8.1:16264597-16264616 | MS.gene044433:CDS | 45.0% | |
| AGATCTCATATGGTTGCTGC+TGG | + | chr8.1:16265374-16265393 | MS.gene044433:CDS | 45.0% | |
| AGGAACAAGTTCCGCAGATT+AGG | + | chr8.1:16265420-16265439 | MS.gene044433:CDS | 45.0% | |
| CCTCCTAAAGATCTACCACA+AGG | - | chr8.1:16264084-16264103 | None:intergenic | 45.0% | |
| CCTTGTGGTAGATCTTTAGG+AGG | + | chr8.1:16264081-16264100 | MS.gene044433:CDS | 45.0% | |
| CTGATTCTAACAGACCTTGG+TGG | + | chr8.1:16265498-16265517 | MS.gene044433:CDS | 45.0% | |
| GAGAGAACCCAAAGAAGACA+TGG | + | chr8.1:16264235-16264254 | MS.gene044433:CDS | 45.0% | |
| GCTGCAACTAATGGTAGCTA+TGG | + | chr8.1:16264207-16264226 | MS.gene044433:CDS | 45.0% | |
| GGAACAAGTTCCGCAGATTA+GGG | + | chr8.1:16265421-16265440 | MS.gene044433:CDS | 45.0% | |
| TAATCTTCCTGCTGCTACTG+AGG | + | chr8.1:16265457-16265476 | MS.gene044433:CDS | 45.0% | |
| TTGCCTTCAACTATCCACCA+AGG | - | chr8.1:16265515-16265534 | None:intergenic | 45.0% | |
| ! | AGACCTTGGTGGATAGTTGA+AGG | + | chr8.1:16265509-16265528 | MS.gene044433:CDS | 45.0% |
| ! | GATCTTTAGGAGGTCACATG+AGG | + | chr8.1:16264091-16264110 | MS.gene044433:CDS | 45.0% |
| !! | CACTCATGGCAAGCTTTGTT+TGG | + | chr8.1:16264333-16264352 | MS.gene044433:CDS | 45.0% |
| !! | GGTTCTGAAGCTGCAACTAA+TGG | + | chr8.1:16264198-16264217 | MS.gene044433:CDS | 45.0% |
| CAATCTGGTCAAGCCTTAGG+TGG | + | chr8.1:16265344-16265363 | MS.gene044433:CDS | 50.0% | |
| CTTTCTTCCTCAGTAGCAGC+AGG | - | chr8.1:16265467-16265486 | None:intergenic | 50.0% | |
| !! | CAAGAGGCACTTGTAGGGTA+CGG | + | chr8.1:16265542-16265561 | MS.gene044433:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 16264021 | 16265580 | 16264021 | ID=MS.gene044433 |
| chr8.1 | mRNA | 16264021 | 16265580 | 16264021 | ID=MS.gene044433.t1;Parent=MS.gene044433 |
| chr8.1 | exon | 16264021 | 16265580 | 16264021 | ID=MS.gene044433.t1.exon1;Parent=MS.gene044433.t1 |
| chr8.1 | CDS | 16264021 | 16265580 | 16264021 | ID=cds.MS.gene044433.t1;Parent=MS.gene044433.t1 |
| Gene Sequence |
| Protein sequence |
