Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044732.t1 | XP_013455733.1 | 86.4 | 235 | 31 | 1 | 1 | 235 | 1 | 234 | 1.10E-102 | 382.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044732.t1 | Q4PSU4 | 30.6 | 170 | 99 | 3 | 1 | 154 | 55 | 221 | 2.2e-11 | 70.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044732.t1 | A0A072UJ33 | 86.4 | 235 | 31 | 1 | 1 | 235 | 1 | 234 | 7.9e-103 | 382.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene044732.t1 | TF | MADS-M-type |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044732.t1 | MTR_4g051538 | 89.362 | 235 | 24 | 1 | 1 | 235 | 1 | 234 | 1.87e-143 | 400 |
| MS.gene044732.t1 | MTR_3g104630 | 51.969 | 127 | 49 | 3 | 106 | 220 | 16 | 142 | 5.34e-31 | 112 |
| MS.gene044732.t1 | MTR_1g105920 | 31.098 | 164 | 96 | 4 | 1 | 150 | 1 | 161 | 1.51e-16 | 76.3 |
| MS.gene044732.t1 | MTR_1g012570 | 27.979 | 193 | 118 | 5 | 1 | 182 | 1 | 183 | 1.54e-16 | 76.3 |
| MS.gene044732.t1 | MTR_5g053390 | 28.194 | 227 | 112 | 8 | 1 | 205 | 1 | 198 | 2.87e-16 | 75.5 |
| MS.gene044732.t1 | MTR_3g080940 | 44.706 | 85 | 46 | 1 | 1 | 85 | 1 | 84 | 2.93e-16 | 75.1 |
| MS.gene044732.t1 | MTR_8g086290 | 30.818 | 159 | 96 | 3 | 4 | 151 | 7 | 162 | 3.52e-16 | 73.9 |
| MS.gene044732.t1 | MTR_1g108510 | 29.114 | 158 | 94 | 3 | 1 | 143 | 1 | 155 | 7.18e-16 | 74.3 |
| MS.gene044732.t1 | MTR_3g052920 | 33.333 | 147 | 88 | 4 | 1 | 137 | 1 | 147 | 8.90e-16 | 74.3 |
| MS.gene044732.t1 | MTR_1g106070 | 31.707 | 164 | 101 | 5 | 1 | 153 | 1 | 164 | 9.06e-16 | 73.2 |
| MS.gene044732.t1 | MTR_1g105910 | 32.609 | 138 | 78 | 3 | 1 | 126 | 1 | 135 | 1.10e-15 | 73.9 |
| MS.gene044732.t1 | MTR_3g030770 | 29.677 | 155 | 97 | 4 | 1 | 143 | 1 | 155 | 1.55e-15 | 73.6 |
| MS.gene044732.t1 | MTR_1g077360 | 40.244 | 82 | 49 | 0 | 1 | 82 | 1 | 82 | 1.80e-15 | 73.6 |
| MS.gene044732.t1 | MTR_2g030740 | 33.333 | 135 | 81 | 2 | 1 | 126 | 1 | 135 | 2.39e-15 | 73.2 |
| MS.gene044732.t1 | MTR_8g043650 | 31.852 | 135 | 83 | 3 | 1 | 126 | 1 | 135 | 2.39e-15 | 73.2 |
| MS.gene044732.t1 | MTR_3g052870 | 40.244 | 82 | 49 | 0 | 1 | 82 | 1 | 82 | 4.44e-15 | 72.0 |
| MS.gene044732.t1 | MTR_1g108580 | 43.056 | 72 | 41 | 0 | 1 | 72 | 1 | 72 | 5.30e-15 | 72.0 |
| MS.gene044732.t1 | MTR_2g105290 | 29.747 | 158 | 99 | 4 | 4 | 151 | 7 | 162 | 1.33e-14 | 69.7 |
| MS.gene044732.t1 | MTR_2g085250 | 38.961 | 77 | 47 | 0 | 1 | 77 | 1 | 77 | 1.34e-14 | 70.9 |
| MS.gene044732.t1 | MTR_2g085280 | 38.961 | 77 | 47 | 0 | 1 | 77 | 1 | 77 | 1.42e-14 | 70.9 |
| MS.gene044732.t1 | MTR_5g055100 | 30.833 | 120 | 65 | 2 | 1 | 120 | 1 | 102 | 1.74e-14 | 70.9 |
| MS.gene044732.t1 | MTR_5g045560 | 28.188 | 149 | 93 | 3 | 1 | 137 | 1 | 147 | 3.28e-14 | 70.1 |
| MS.gene044732.t1 | MTR_1g075600 | 36.585 | 82 | 52 | 0 | 1 | 82 | 1 | 82 | 1.64e-13 | 68.2 |
| MS.gene044732.t1 | MTR_4g094638 | 39.130 | 69 | 42 | 0 | 9 | 77 | 2 | 70 | 2.06e-13 | 66.6 |
| MS.gene044732.t1 | MTR_0121s0100 | 35.065 | 77 | 50 | 0 | 1 | 77 | 1 | 77 | 2.34e-13 | 65.5 |
| MS.gene044732.t1 | MTR_2g093190 | 37.662 | 77 | 48 | 0 | 1 | 77 | 1 | 77 | 3.00e-13 | 67.0 |
| MS.gene044732.t1 | MTR_4g094632 | 36.145 | 83 | 53 | 0 | 9 | 91 | 2 | 84 | 5.55e-13 | 65.1 |
| MS.gene044732.t1 | MTR_3g030780 | 32.979 | 94 | 61 | 1 | 1 | 92 | 1 | 94 | 7.56e-13 | 63.9 |
| MS.gene044732.t1 | MTR_0121s0080 | 25.904 | 166 | 106 | 4 | 1 | 152 | 1 | 163 | 5.42e-12 | 63.9 |
| MS.gene044732.t1 | MTR_8g046350 | 36.111 | 72 | 46 | 0 | 9 | 80 | 2 | 73 | 1.49e-11 | 61.2 |
| MS.gene044732.t1 | MTR_8g079502 | 29.412 | 136 | 73 | 4 | 9 | 123 | 2 | 135 | 3.27e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044732.t1 | AT4G36590 | 50.000 | 68 | 34 | 0 | 5 | 72 | 3 | 70 | 1.73e-17 | 79.3 |
| MS.gene044732.t1 | AT1G29962 | 46.250 | 80 | 42 | 1 | 1 | 80 | 1 | 79 | 1.56e-16 | 75.1 |
| MS.gene044732.t1 | AT2G24840 | 30.488 | 164 | 95 | 3 | 7 | 154 | 61 | 221 | 4.58e-16 | 75.5 |
| MS.gene044732.t1 | AT2G34440 | 34.884 | 129 | 76 | 4 | 9 | 130 | 2 | 129 | 3.87e-15 | 71.2 |
| MS.gene044732.t1 | AT1G28460 | 45.455 | 77 | 41 | 1 | 1 | 77 | 1 | 76 | 5.29e-14 | 68.6 |
| MS.gene044732.t1 | AT5G60440 | 28.293 | 205 | 119 | 6 | 5 | 200 | 3 | 188 | 5.51e-14 | 70.1 |
| MS.gene044732.t1 | AT1G01530 | 27.419 | 124 | 78 | 2 | 5 | 116 | 3 | 126 | 3.85e-12 | 64.3 |
| MS.gene044732.t1 | AT3G04100 | 38.095 | 84 | 49 | 1 | 2 | 85 | 7 | 87 | 6.61e-12 | 63.2 |
| MS.gene044732.t1 | AT1G28450 | 41.250 | 80 | 46 | 1 | 1 | 80 | 1 | 79 | 9.60e-12 | 62.4 |
| MS.gene044732.t1 | AT1G65360 | 43.333 | 60 | 34 | 0 | 9 | 68 | 7 | 66 | 1.01e-11 | 62.8 |
Find 43 sgRNAs with CRISPR-Local
Find 74 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCGAGTTAACAACACTTTC+AGG | 0.165743 | 4.4:-51351204 | MS.gene044732:CDS |
| TTGAAGAAGTTGGAAAGTTC+TGG | 0.270990 | 4.4:-51350973 | MS.gene044732:CDS |
| TGCACCAACTTCATGATCTT+TGG | 0.281401 | 4.4:+51350642 | None:intergenic |
| ACACAAGGAGTCAACCTTAT+TGG | 0.301989 | 4.4:-51350259 | MS.gene044732:CDS |
| GATGGGTTTCCATAACAAAA+TGG | 0.311638 | 4.4:+51351141 | None:intergenic |
| ATAACCAATGTCTTGAAAAC+TGG | 0.328346 | 4.4:-51350871 | MS.gene044732:CDS |
| CTTATTGGTGTAAGCGGAAT+AGG | 0.333563 | 4.4:-51350244 | MS.gene044732:CDS |
| CTTCTACCATGTCATATATC+TGG | 0.335672 | 4.4:+51350193 | None:intergenic |
| CTATTCCGCTTACACCAATA+AGG | 0.352863 | 4.4:+51350245 | None:intergenic |
| TTTCTTTCACTTGATCATAT+TGG | 0.353442 | 4.4:+51350929 | None:intergenic |
| ATCATTTCCACTTCCATTGA+AGG | 0.371552 | 4.4:+51351078 | None:intergenic |
| AGTTGGAAAGTTCTGGATAT+TGG | 0.382288 | 4.4:-51350966 | MS.gene044732:CDS |
| ATTCTCATGCTTTCTCCAAC+GGG | 0.403336 | 4.4:-51351168 | MS.gene044732:CDS |
| TTTATTTACGACAGCAACTA+AGG | 0.422183 | 4.4:+51350897 | None:intergenic |
| TTTGTTATAGATTCAGAAGA+TGG | 0.427015 | 4.4:+51351123 | None:intergenic |
| CCGAGTTAACAACACTTTCA+GGG | 0.450892 | 4.4:-51351203 | MS.gene044732:CDS |
| CCCTGAAAGTGTTGTTAACT+CGG | 0.457016 | 4.4:+51351203 | None:intergenic |
| CGTAGCAATTTCTACCATTG+AGG | 0.467584 | 4.4:-51350713 | MS.gene044732:intron |
| GAAGGATGAAAATCCTTCAA+TGG | 0.468568 | 4.4:-51351091 | MS.gene044732:CDS |
| GACTCCATTCAGTTCCTCAA+TGG | 0.472764 | 4.4:+51350699 | None:intergenic |
| GGAAGTGGAAATGATGAAAC+CGG | 0.474804 | 4.4:-51351070 | MS.gene044732:CDS |
| GGTGTAAGCGGAATAGGATA+TGG | 0.475102 | 4.4:-51350238 | MS.gene044732:CDS |
| TGTTGCATTTACAACGAGAA+AGG | 0.475609 | 4.4:-51351247 | MS.gene044732:CDS |
| TGAAAATCCTTCAATGGAAG+TGG | 0.475677 | 4.4:-51351085 | MS.gene044732:CDS |
| TATTCTCATGCTTTCTCCAA+CGG | 0.502164 | 4.4:-51351169 | MS.gene044732:CDS |
| TTGTTATAGATTCAGAAGAT+GGG | 0.510327 | 4.4:+51351124 | None:intergenic |
| TCTACCATTGAGGAACTGAA+TGG | 0.512244 | 4.4:-51350703 | MS.gene044732:CDS |
| TTGTCCTCAAAGACAAAAGA+AGG | 0.512656 | 4.4:+51350667 | None:intergenic |
| GCATTTACAACGAGAAAGGC+TGG | 0.523590 | 4.4:-51351243 | MS.gene044732:CDS |
| TTATCCAAAAGGTAAAGGTA+TGG | 0.531949 | 4.4:-51350317 | MS.gene044732:intron |
| GCGCCGAAGAGGTCATCAAA+AGG | 0.555723 | 4.4:-51351318 | MS.gene044732:CDS |
| AACACCAAAGATCATGAAGT+TGG | 0.566706 | 4.4:-51350646 | MS.gene044732:CDS |
| TGGATATTGGTCGATAAAAG+AGG | 0.572226 | 4.4:-51350953 | MS.gene044732:CDS |
| GTCAACCTTATTGGTGTAAG+CGG | 0.584588 | 4.4:-51350250 | MS.gene044732:CDS |
| CGAGTTAACAACACTTTCAG+GGG | 0.590811 | 4.4:-51351202 | MS.gene044732:CDS |
| ACCAATGTCTTGAAAACTGG+AGG | 0.591573 | 4.4:-51350868 | MS.gene044732:CDS |
| AGCGGAATAGGATATGGAAG+TGG | 0.601533 | 4.4:-51350232 | MS.gene044732:CDS |
| GAGTAAGAATGGCGCCGAAG+AGG | 0.609055 | 4.4:-51351329 | None:intergenic |
| GGAGGAGAGATTGACCCTCA+TGG | 0.634950 | 4.4:-51350850 | MS.gene044732:intron |
| AAGATGTACACATACCATGA+GGG | 0.689701 | 4.4:+51350836 | None:intergenic |
| TGAAAGTGTTGTTAACTCGG+AGG | 0.701093 | 4.4:+51351206 | None:intergenic |
| AAGCATGAGAATATCAACTG+AGG | 0.718686 | 4.4:+51351179 | None:intergenic |
| AAAGGCTGGAATTTACAACA+AGG | 0.729615 | 4.4:-51351229 | MS.gene044732:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATTGAATCAATGAA+AGG | + | chr4.4:51351189-51351208 | None:intergenic | 15.0% |
| !! | CAATACATAATATATATGTT+AGG | + | chr4.4:51351161-51351180 | None:intergenic | 15.0% |
| !! | CTTAAAATAATTAGGTAAAA+AGG | + | chr4.4:51350772-51350791 | None:intergenic | 15.0% |
| !!! | TTCAATTTTTTTTATCCAAA+AGG | - | chr4.4:51351197-51351216 | MS.gene044732:CDS | 15.0% |
| !! | CAGATTCACTTAAAATAATT+AGG | + | chr4.4:51350780-51350799 | None:intergenic | 20.0% |
| !! | GTTGAAAAAAATTGAGAAAA+AGG | - | chr4.4:51350245-51350264 | MS.gene044732:CDS | 20.0% |
| !!! | CTAATTATTTTAAGTGAATC+TGG | - | chr4.4:51350778-51350797 | MS.gene044732:intron | 20.0% |
| !!! | TATAACAAAAACTAGTTTGA+AGG | - | chr4.4:51350416-51350435 | MS.gene044732:intron | 20.0% |
| !!! | TGAAAAAAATGATGATCTTT+TGG | - | chr4.4:51350494-51350513 | MS.gene044732:intron | 20.0% |
| !!! | TTTTTTTATCCAAAAGGTAA+AGG | - | chr4.4:51351203-51351222 | MS.gene044732:CDS | 20.0% |
| ! | ACGTAAAAATTTGAAGAAGT+TGG | - | chr4.4:51350542-51350561 | MS.gene044732:intron | 25.0% |
| ! | ATAGCTACAAAAAAAACACA+AGG | - | chr4.4:51351251-51351270 | MS.gene044732:CDS | 25.0% |
| ! | TCTTCTTAATTTCCATTACT+AGG | - | chr4.4:51351098-51351117 | MS.gene044732:CDS | 25.0% |
| ! | TTGTTATAGATTCAGAAGAT+GGG | + | chr4.4:51350404-51350423 | None:intergenic | 25.0% |
| ! | TTTCTTTCACTTGATCATAT+TGG | + | chr4.4:51350599-51350618 | None:intergenic | 25.0% |
| !! | TTTGTTATAGATTCAGAAGA+TGG | + | chr4.4:51350405-51350424 | None:intergenic | 25.0% |
| !! | TTTTTCATGAAATATCCTAG+CGG | - | chr4.4:51350945-51350964 | MS.gene044732:CDS | 25.0% |
| AATGACGTCAAATGATTTCA+TGG | - | chr4.4:51350743-51350762 | MS.gene044732:intron | 30.0% | |
| ATAACCAATGTCTTGAAAAC+TGG | - | chr4.4:51350654-51350673 | MS.gene044732:CDS | 30.0% | |
| CTAGAGATATTTGATGTGTT+GGG | + | chr4.4:51351026-51351045 | None:intergenic | 30.0% | |
| TCTAGAGATATTTGATGTGT+TGG | + | chr4.4:51351027-51351046 | None:intergenic | 30.0% | |
| TTATCCAAAAGGTAAAGGTA+TGG | - | chr4.4:51351208-51351227 | MS.gene044732:CDS | 30.0% | |
| TTTATTTACGACAGCAACTA+AGG | + | chr4.4:51350631-51350650 | None:intergenic | 30.0% | |
| ! | AAATCCTTCTTTTGTCTTTG+AGG | - | chr4.4:51350854-51350873 | MS.gene044732:CDS | 30.0% |
| ! | TCATTTTGCTCTATAATCTC+CGG | + | chr4.4:51350477-51350496 | None:intergenic | 30.0% |
| ! | TTTGGATAAAAAGCATGTTG+CGG | - | chr4.4:51350512-51350531 | MS.gene044732:intron | 30.0% |
| ! | TTTTGTAGCTATATCTTGAG+AGG | + | chr4.4:51351243-51351262 | None:intergenic | 30.0% |
| !! | ACCATTTAAGTTGCACTTAT+GGG | - | chr4.4:51351057-51351076 | MS.gene044732:CDS | 30.0% |
| !! | TACCATTTAAGTTGCACTTA+TGG | - | chr4.4:51351056-51351075 | MS.gene044732:CDS | 30.0% |
| AAAGGCTGGAATTTACAACA+AGG | - | chr4.4:51350296-51350315 | MS.gene044732:CDS | 35.0% | |
| AACACCAAAGATCATGAAGT+TGG | - | chr4.4:51350879-51350898 | MS.gene044732:CDS | 35.0% | |
| AAGATGTACACATACCATGA+GGG | + | chr4.4:51350692-51350711 | None:intergenic | 35.0% | |
| AAGCATGAGAATATCAACTG+AGG | + | chr4.4:51350349-51350368 | None:intergenic | 35.0% | |
| AATGTTTGCATGCCTAGTAA+TGG | + | chr4.4:51351113-51351132 | None:intergenic | 35.0% | |
| ATCATTTCCACTTCCATTGA+AGG | + | chr4.4:51350450-51350469 | None:intergenic | 35.0% | |
| GAAGGATGAAAATCCTTCAA+TGG | - | chr4.4:51350434-51350453 | MS.gene044732:intron | 35.0% | |
| TAGACAAGATCAGATGTTGT+TGG | - | chr4.4:51350990-51351009 | MS.gene044732:CDS | 35.0% | |
| TATTCTCATGCTTTCTCCAA+CGG | - | chr4.4:51350356-51350375 | MS.gene044732:intron | 35.0% | |
| TCCCATAAGTGCAACTTAAA+TGG | + | chr4.4:51351061-51351080 | None:intergenic | 35.0% | |
| TGAAAATCCTTCAATGGAAG+TGG | - | chr4.4:51350440-51350459 | MS.gene044732:intron | 35.0% | |
| TGGATATTGGTCGATAAAAG+AGG | - | chr4.4:51350572-51350591 | MS.gene044732:intron | 35.0% | |
| TGTTGCATTTACAACGAGAA+AGG | - | chr4.4:51350278-51350297 | MS.gene044732:CDS | 35.0% | |
| TTGAAGAAGTTGGAAAGTTC+TGG | - | chr4.4:51350552-51350571 | MS.gene044732:intron | 35.0% | |
| TTGTCCTCAAAGACAAAAGA+AGG | + | chr4.4:51350861-51350880 | None:intergenic | 35.0% | |
| ! | ACGGGAAAACCATTTTGTTA+TGG | - | chr4.4:51350375-51350394 | MS.gene044732:intron | 35.0% |
| ! | GATGGGTTTCCATAACAAAA+TGG | + | chr4.4:51350387-51350406 | None:intergenic | 35.0% |
| ! | TAACAAAATGGTTTTCCCGT+TGG | + | chr4.4:51350375-51350394 | None:intergenic | 35.0% |
| !! | AGTTGGAAAGTTCTGGATAT+TGG | - | chr4.4:51350559-51350578 | MS.gene044732:intron | 35.0% |
| !! | TTTCCTTTTGATGACCTCTT+CGG | + | chr4.4:51350213-51350232 | None:intergenic | 35.0% |
| ACACAAGGAGTCAACCTTAT+TGG | - | chr4.4:51351266-51351285 | MS.gene044732:CDS | 40.0% | |
| ACCAATGTCTTGAAAACTGG+AGG | - | chr4.4:51350657-51350676 | MS.gene044732:CDS | 40.0% | |
| ATTCTCATGCTTTCTCCAAC+GGG | - | chr4.4:51350357-51350376 | MS.gene044732:intron | 40.0% | |
| CAAGATGTACACATACCATG+AGG | + | chr4.4:51350693-51350712 | None:intergenic | 40.0% | |
| CCGAGTTAACAACACTTTCA+GGG | - | chr4.4:51350322-51350341 | MS.gene044732:intron | 40.0% | |
| CGAGTTAACAACACTTTCAG+GGG | - | chr4.4:51350323-51350342 | MS.gene044732:intron | 40.0% | |
| CGTAGCAATTTCTACCATTG+AGG | - | chr4.4:51350812-51350831 | MS.gene044732:intron | 40.0% | |
| CTATTCCGCTTACACCAATA+AGG | + | chr4.4:51351283-51351302 | None:intergenic | 40.0% | |
| CTTATTGGTGTAAGCGGAAT+AGG | - | chr4.4:51351281-51351300 | MS.gene044732:CDS | 40.0% | |
| GGAAGTGGAAATGATGAAAC+CGG | - | chr4.4:51350455-51350474 | MS.gene044732:intron | 40.0% | |
| GTCAACCTTATTGGTGTAAG+CGG | - | chr4.4:51351275-51351294 | MS.gene044732:CDS | 40.0% | |
| TCCGAGTTAACAACACTTTC+AGG | - | chr4.4:51350321-51350340 | MS.gene044732:intron | 40.0% | |
| TCTACCATTGAGGAACTGAA+TGG | - | chr4.4:51350822-51350841 | MS.gene044732:intron | 40.0% | |
| TGCACCAACTTCATGATCTT+TGG | + | chr4.4:51350886-51350905 | None:intergenic | 40.0% | |
| ! | GCAACCATACCTTTACCTTT+TGG | + | chr4.4:51351215-51351234 | None:intergenic | 40.0% |
| !! | CCCTGAAAGTGTTGTTAACT+CGG | + | chr4.4:51350325-51350344 | None:intergenic | 40.0% |
| !! | TCCTCCAGTTTTCAAGACAT+TGG | + | chr4.4:51350661-51350680 | None:intergenic | 40.0% |
| !! | TGAAAGTGTTGTTAACTCGG+AGG | + | chr4.4:51350322-51350341 | None:intergenic | 40.0% |
| AGCGGAATAGGATATGGAAG+TGG | - | chr4.4:51351293-51351312 | MS.gene044732:CDS | 45.0% | |
| GACTCCATTCAGTTCCTCAA+TGG | + | chr4.4:51350829-51350848 | None:intergenic | 45.0% | |
| GCATTTACAACGAGAAAGGC+TGG | - | chr4.4:51350282-51350301 | MS.gene044732:CDS | 45.0% | |
| GGTGTAAGCGGAATAGGATA+TGG | - | chr4.4:51351287-51351306 | MS.gene044732:CDS | 45.0% | |
| ! | AATGTGTGAGTGTTGCCGCT+AGG | + | chr4.4:51350963-51350982 | None:intergenic | 50.0% |
| GCGCCGAAGAGGTCATCAAA+AGG | - | chr4.4:51350207-51350226 | MS.gene044732:CDS | 55.0% | |
| GGAGGAGAGATTGACCCTCA+TGG | - | chr4.4:51350675-51350694 | MS.gene044732:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 51350204 | 51351343 | 51350204 | ID=MS.gene044732 |
| chr4.4 | mRNA | 51350204 | 51351343 | 51350204 | ID=MS.gene044732.t1;Parent=MS.gene044732 |
| chr4.4 | exon | 51350851 | 51351343 | 51350851 | ID=MS.gene044732.t1.exon1;Parent=MS.gene044732.t1 |
| chr4.4 | CDS | 51350851 | 51351343 | 51350851 | ID=cds.MS.gene044732.t1;Parent=MS.gene044732.t1 |
| chr4.4 | exon | 51350641 | 51350730 | 51350641 | ID=MS.gene044732.t1.exon2;Parent=MS.gene044732.t1 |
| chr4.4 | CDS | 51350641 | 51350730 | 51350641 | ID=cds.MS.gene044732.t1;Parent=MS.gene044732.t1 |
| chr4.4 | exon | 51350204 | 51350328 | 51350204 | ID=MS.gene044732.t1.exon3;Parent=MS.gene044732.t1 |
| chr4.4 | CDS | 51350204 | 51350328 | 51350204 | ID=cds.MS.gene044732.t1;Parent=MS.gene044732.t1 |
| Gene Sequence |
| Protein sequence |
