AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene044827

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene044827.t1 MTR_7g027190 98.516 674 10 0 1 674 1 674 0.0 1383
MS.gene044827.t1 MTR_4g104020 41.604 399 211 6 288 674 133 521 7.15e-97 308
MS.gene044827.t1 MTR_7g074650 42.175 377 185 6 304 673 442 792 2.49e-93 306
MS.gene044827.t1 MTR_3g065980 35.619 525 270 13 184 674 51 541 1.01e-91 295
MS.gene044827.t1 MTR_8g442410 40.863 394 206 6 292 673 147 525 1.26e-88 287
MS.gene044827.t1 MTR_5g097480 40.204 393 205 5 293 673 170 544 3.22e-88 286
MS.gene044827.t1 MTR_4g102790 38.046 389 218 7 294 672 286 661 7.76e-81 270
MS.gene044827.t1 MTR_1g029420 39.332 389 202 6 299 673 224 592 1.44e-79 265
MS.gene044827.t1 MTR_3g056110 32.734 556 296 10 162 673 21 542 1.44e-78 260
MS.gene044827.t1 MTR_5g094450 33.406 461 267 7 233 673 92 532 4.70e-78 259
MS.gene044827.t1 MTR_2g082090 36.259 433 240 5 258 672 164 578 1.02e-77 259
MS.gene044827.t1 MTR_3g089055 37.629 388 210 5 299 673 202 570 4.95e-75 252
MS.gene044827.t1 MTR_3g089055 37.629 388 210 5 299 673 197 565 5.48e-75 251
MS.gene044827.t1 MTR_4g133660 36.456 395 216 7 295 674 170 544 1.79e-71 241
MS.gene044827.t1 MTR_4g076020 39.037 374 192 11 304 673 88 429 1.82e-71 238
MS.gene044827.t1 MTR_2g026250 33.081 396 228 6 295 674 223 597 3.24e-69 237
MS.gene044827.t1 MTR_4g064160 34.000 400 234 6 286 672 301 683 1.86e-65 229
MS.gene044827.t1 MTR_5g058860 36.930 417 210 17 288 674 105 498 1.33e-64 222
MS.gene044827.t1 MTR_1g096030 34.383 413 219 14 290 673 70 459 4.17e-64 219
MS.gene044827.t1 MTR_1g069725 34.872 390 225 10 290 674 99 464 6.75e-64 219
MS.gene044827.t1 MTR_3g072710 37.101 407 219 14 290 674 110 501 2.00e-63 219
MS.gene044827.t1 MTR_3g022830 30.140 428 227 5 301 673 26 436 4.53e-62 213
MS.gene044827.t1 MTR_7g062120 32.398 392 234 5 295 673 367 740 3.04e-59 213
MS.gene044827.t1 MTR_4g064120 31.910 398 234 5 291 670 245 623 5.32e-59 210
MS.gene044827.t1 MTR_4g064180 31.910 398 234 5 291 670 245 623 9.27e-58 206
MS.gene044827.t1 MTR_2g097410 31.807 393 237 6 294 672 365 740 6.61e-57 206
MS.gene044827.t1 MTR_4g064200 31.714 391 234 7 295 672 279 649 1.09e-56 204
MS.gene044827.t1 MTR_2g097310 30.848 389 240 6 295 672 267 637 1.43e-56 203
MS.gene044827.t1 MTR_4g064150 31.671 401 237 7 290 672 351 732 2.92e-55 201
MS.gene044827.t1 MTR_2g097390 30.334 389 242 6 295 672 270 640 6.49e-55 199
MS.gene044827.t1 MTR_2g097467 29.771 393 242 5 293 672 282 653 2.13e-54 197
MS.gene044827.t1 MTR_4g097080 30.412 388 241 9 299 673 132 503 2.55e-53 191
MS.gene044827.t1 MTR_2g097350 29.820 389 244 6 295 672 269 639 8.23e-53 193
MS.gene044827.t1 MTR_2g097473 29.975 397 236 7 293 672 282 653 1.50e-51 189
MS.gene044827.t1 MTR_4g077760 33.962 371 208 8 316 673 209 555 9.49e-51 185
MS.gene044827.t1 MTR_2g097463 27.949 390 249 5 295 672 285 654 4.71e-50 185
MS.gene044827.t1 MTR_2g034250 31.514 403 248 9 286 673 196 585 3.05e-48 179
MS.gene044827.t1 MTR_5g015490 30.923 401 240 11 293 673 107 490 4.21e-48 176
MS.gene044827.t1 MTR_2g097380 29.235 366 205 6 316 672 240 560 2.14e-47 176
MS.gene044827.t1 MTR_2g034280 29.703 404 251 11 286 673 189 575 1.03e-45 172
MS.gene044827.t1 MTR_2g034260 30.296 406 248 11 286 673 196 584 1.79e-45 171
MS.gene044827.t1 MTR_7g109580 29.723 397 253 9 286 673 175 554 1.78e-44 167
MS.gene044827.t1 MTR_2g089100 28.186 408 241 10 300 672 52 442 1.13e-42 160
MS.gene044827.t1 MTR_8g093070 32.426 404 221 15 287 672 126 495 6.83e-42 159
MS.gene044827.t1 MTR_1g086970 28.571 406 265 11 283 673 83 478 1.88e-41 157
MS.gene044827.t1 MTR_5g009080 37.229 231 123 2 289 516 45 256 1.09e-40 155
MS.gene044827.t1 MTR_5g009080 43.624 149 84 0 525 673 330 478 8.24e-39 150
MS.gene044827.t1 MTR_4g076140 44.595 148 82 0 526 673 322 469 2.47e-39 151
MS.gene044827.t1 MTR_4g076140 35.526 228 131 2 289 516 37 248 1.87e-35 140
MS.gene044827.t1 MTR_7g057230 34.007 297 175 8 392 672 365 656 1.56e-38 152
MS.gene044827.t1 MTR_0092s0100 29.124 388 238 11 297 674 372 732 1.31e-35 144
MS.gene044827.t1 MTR_0092s0100 29.124 388 238 11 297 674 369 729 1.36e-35 144
MS.gene044827.t1 MTR_2g099110 26.329 395 253 10 300 673 74 451 3.12e-33 133
MS.gene044827.t1 MTR_6g047750 29.383 405 216 13 301 673 296 662 3.33e-33 136
MS.gene044827.t1 MTR_4g095500 25.714 420 254 9 300 672 59 467 6.60e-32 130
MS.gene044827.t1 MTR_4g026485 28.238 386 235 12 301 674 270 625 2.61e-31 130
MS.gene044827.t1 MTR_5g015950 24.882 422 257 11 300 672 35 445 4.37e-31 127
MS.gene044827.t1 MTR_3g053270 24.882 422 257 11 300 672 35 445 4.37e-31 127
MS.gene044827.t1 MTR_8g077940 27.226 393 242 14 297 674 179 542 8.11e-29 121
MS.gene044827.t1 MTR_3g022580 41.441 111 64 1 563 673 74 183 2.62e-22 95.1
MS.gene044827.t1 MTR_8g020840 23.645 406 250 12 300 673 171 548 7.43e-20 94.0
MS.gene044827.t1 MTR_3g022005 41.176 102 59 1 572 673 25 125 9.89e-20 85.9
MS.gene044827.t1 MTR_1g106590 30.714 140 75 2 291 427 121 241 1.30e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene044827.t1 AT1G66350 43.846 390 185 11 291 674 146 507 9.80e-97 307
MS.gene044827.t1 AT3G03450 41.837 392 199 8 291 673 174 545 5.86e-94 301
MS.gene044827.t1 AT3G54220 41.709 398 196 6 285 672 278 649 3.00e-93 302
MS.gene044827.t1 AT1G14920 40.458 393 198 9 291 673 163 529 3.40e-89 288
MS.gene044827.t1 AT5G17490 42.711 391 191 10 291 673 151 516 2.59e-88 286
MS.gene044827.t1 AT5G41920 40.759 395 202 9 287 673 30 400 1.24e-86 277
MS.gene044827.t1 AT2G01570 40.204 393 199 10 291 673 215 581 4.03e-86 282
MS.gene044827.t1 AT2G04890 39.949 393 209 5 287 673 42 413 2.50e-84 271
MS.gene044827.t1 AT5G48150 39.481 385 204 5 301 673 123 490 3.12e-83 271
MS.gene044827.t1 AT5G48150 39.481 385 204 5 301 673 123 490 3.12e-83 271
MS.gene044827.t1 AT5G48150 39.481 385 204 5 301 673 123 490 3.12e-83 271
MS.gene044827.t1 AT5G48150 39.481 385 204 5 301 673 123 490 3.12e-83 271
MS.gene044827.t1 AT1G50600 38.817 389 208 6 297 673 156 526 2.26e-74 249
MS.gene044827.t1 AT1G50600 39.332 389 206 7 297 673 227 597 5.59e-74 250
MS.gene044827.t1 AT1G50600 39.332 389 206 7 297 673 231 601 8.00e-74 249
MS.gene044827.t1 AT1G21450 36.434 387 217 4 299 673 224 593 2.25e-72 245
MS.gene044827.t1 AT1G55580 37.438 406 226 8 296 673 40 445 1.59e-71 239
MS.gene044827.t1 AT4G17230 36.061 391 220 4 295 673 153 525 3.79e-68 232
MS.gene044827.t1 AT4G17230 36.061 391 220 4 295 673 153 525 3.79e-68 232
MS.gene044827.t1 AT1G63100 34.343 396 228 7 295 672 247 628 4.20e-66 229
MS.gene044827.t1 AT1G63100 34.343 396 228 7 295 672 272 653 6.38e-66 229
MS.gene044827.t1 AT1G07520 31.762 403 245 8 286 672 140 528 2.19e-59 209
MS.gene044827.t1 AT1G07520 31.762 403 245 8 286 672 140 528 2.19e-59 209
MS.gene044827.t1 AT1G07520 31.592 402 247 7 286 672 304 692 9.51e-59 210
MS.gene044827.t1 AT1G07520 31.592 402 247 7 286 672 305 693 1.01e-58 210
MS.gene044827.t1 AT5G59450 29.442 394 246 6 295 673 222 598 1.83e-57 205
MS.gene044827.t1 AT3G46600 30.326 399 246 5 288 673 200 579 1.90e-57 204
MS.gene044827.t1 AT3G46600 30.326 399 246 5 288 673 168 547 4.59e-57 203
MS.gene044827.t1 AT3G46600 30.670 388 237 5 299 673 3 371 1.92e-56 196
MS.gene044827.t1 AT1G07530 31.538 390 235 6 297 672 393 764 1.12e-55 203
MS.gene044827.t1 AT2G29065 29.820 389 244 7 300 672 252 627 5.18e-55 199
MS.gene044827.t1 AT5G66770 35.038 391 217 10 297 673 217 584 1.04e-53 194
MS.gene044827.t1 AT2G29060 30.612 392 238 7 297 672 281 654 4.63e-53 194
MS.gene044827.t1 AT2G29060 30.612 392 238 7 297 672 318 691 6.14e-53 194
MS.gene044827.t1 AT2G37650 29.923 391 243 5 295 673 342 713 9.63e-53 194
MS.gene044827.t1 AT2G37650 29.923 391 243 5 295 673 330 701 1.07e-52 194
MS.gene044827.t1 AT4G08250 32.432 407 228 14 288 672 95 476 1.99e-49 180
MS.gene044827.t1 AT3G50650 33.962 371 205 9 320 673 195 542 3.87e-46 172
MS.gene044827.t1 AT4G37650 29.397 398 243 10 300 673 146 529 1.14e-43 165
MS.gene044827.t1 AT5G52510 30.250 400 224 9 301 673 269 640 3.33e-40 157
MS.gene044827.t1 AT1G50420 45.333 150 82 0 525 674 331 480 7.52e-39 150
MS.gene044827.t1 AT1G50420 38.496 226 125 2 291 516 48 259 2.86e-38 149
MS.gene044827.t1 AT3G49950 28.678 401 237 10 299 672 29 407 3.46e-33 132
MS.gene044827.t1 AT4G36710 27.136 398 255 11 287 673 112 485 9.53e-29 120
MS.gene044827.t1 AT4G00150 27.612 402 236 14 282 674 200 555 1.38e-28 121
MS.gene044827.t1 AT2G45160 27.829 327 204 9 367 674 327 640 1.50e-28 121
MS.gene044827.t1 AT3G60630 28.852 305 191 10 388 674 327 623 2.76e-27 117
MS.gene044827.t1 AT3G13840 24.557 395 245 14 300 673 148 510 1.98e-14 77.0

Find 158 sgRNAs with CRISPR-Local

Find 199 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTCCAATATCAACAATTT+TGG 0.134391 7.2:+72431580 MS.gene044827:CDS
TGTTGCATATATTGATTATT+TGG 0.203768 7.2:-72431449 None:intergenic
GTAGAAGCTTGTGGTGAATT+AGG 0.209436 7.2:-72431269 None:intergenic
CTATCCAAAATTGTTGATAT+TGG 0.238972 7.2:-72431584 None:intergenic
GACTCAATCAAGGATATTAT+TGG 0.253341 7.2:+72433283 MS.gene044827:CDS
TGTATTCATGTGATGGTTAC+AGG 0.259318 7.2:+72433309 MS.gene044827:CDS
AATAGTAATAACCAACAAAA+AGG 0.261319 7.2:+72431389 MS.gene044827:CDS
TGCCTCAAACGCCTCGAAAA+TGG 0.275785 7.2:-72432616 None:intergenic
TTAGGGTTAATGTTTCTAAT+TGG 0.288688 7.2:-72431251 None:intergenic
GATGGTAAGTTTAGGCTTTG+TGG 0.292426 7.2:-72431122 None:intergenic
TAGAAGCTTGTGGTGAATTA+GGG 0.297220 7.2:-72431268 None:intergenic
GACATGAGAGGTTGGAGAAA+TGG 0.307042 7.2:+72433204 MS.gene044827:CDS
CTTGATTGAGTCACTGCATT+AGG 0.311878 7.2:-72433272 None:intergenic
GCCAGCTATTGAAGAGTTCT+TGG 0.313450 7.2:+72431490 MS.gene044827:CDS
GTATCATCAAATGGGATCTA+TGG 0.314373 7.2:+72431712 MS.gene044827:CDS
TCTCTCAAATTTGACTTAGA+TGG 0.323118 7.2:+72431143 MS.gene044827:CDS
AACCGTCTCCACCGTGTTCC+TGG 0.336032 7.2:+72432921 MS.gene044827:CDS
TTGATGATGACTTGGTTGTT+AGG 0.342078 7.2:-72432440 None:intergenic
GGTCTCTTATCATGGATAAC+AGG 0.350431 7.2:-72432959 None:intergenic
ACTCAATCAAGGATATTATT+GGG 0.352700 7.2:+72433284 MS.gene044827:CDS
ATTTGTTTGATTTGAAGAAT+TGG 0.357982 7.2:-72431036 None:intergenic
TCCTCAAGTTGTTCTCCAAC+AGG 0.371000 7.2:-72432840 None:intergenic
CCGCCGTGTAGGCGAGGCTT+TGG 0.375077 7.2:+72432884 MS.gene044827:CDS
TGGTGCTTGGTCTCTTATCA+TGG 0.378979 7.2:-72432967 None:intergenic
ATAAAGGTTGTTTGTTGCTT+GGG 0.381702 7.2:+72433342 MS.gene044827:CDS
GTCACTGCATTAGGACTTAG+AGG 0.385725 7.2:-72433263 None:intergenic
CTAACAGTTCCTATTCCAAT+TGG 0.386725 7.2:+72431815 MS.gene044827:CDS
GATAAAGGTTGTTTGTTGCT+TGG 0.388205 7.2:+72433341 MS.gene044827:CDS
CCATGCAGAAGCAGCGATAA+TGG 0.390323 7.2:-72433378 None:intergenic
GCTTCCCACATTGAACTATC+TGG 0.392042 7.2:-72431185 None:intergenic
TTTGTTTGATTTGAAGAATT+GGG 0.395359 7.2:-72431035 None:intergenic
CCGGCGGTGCTCCGTTCCTT+AGG 0.397678 7.2:+72432721 MS.gene044827:CDS
AGGACTTCCATAGGGTTTGA+TGG 0.398057 7.2:-72432525 None:intergenic
CACAAGCTTTACAGCAAGAA+AGG 0.398985 7.2:+72431750 MS.gene044827:CDS
AATGCAAAGCCTCGAGAAAT+CGG 0.401833 7.2:-72433046 None:intergenic
GCCAATGCCTGCATGAATGC+AGG 0.402364 7.2:-72432690 None:intergenic
ATGCAAATTCAAAGCCTATC+AGG 0.406320 7.2:+72431326 MS.gene044827:CDS
CAGGCCATTGGTAGCCTTGA+AGG 0.407502 7.2:-72432671 None:intergenic
TACAGGTTAACTGAGGATAA+AGG 0.412392 7.2:+72433326 MS.gene044827:CDS
CAGGCATTGGCTGCACGGCC+CGG 0.413918 7.2:+72432702 MS.gene044827:CDS
ATTTGAGAGATGGTAAGTTT+AGG 0.417615 7.2:-72431130 None:intergenic
TGATGATGACTTGGTTGTTA+GGG 0.418899 7.2:-72432439 None:intergenic
ATCGACCTTGATATCCTTCA+AGG 0.423493 7.2:+72432657 MS.gene044827:CDS
GAGTGATATGTATCATCAAA+TGG 0.430639 7.2:+72431703 MS.gene044827:CDS
TCCACAAGTGTCACTATGTT+TGG 0.431028 7.2:-72432987 None:intergenic
ATATATTTGCACCGGAGATT+CGG 0.433485 7.2:+72433144 MS.gene044827:CDS
CCTAAGGAACGGAGCACCGC+CGG 0.433800 7.2:-72432721 None:intergenic
TCCTTAGGATCACTGGAGTT+GGG 0.435193 7.2:+72432736 MS.gene044827:CDS
CTCGAAAATGGCTTGGTTAG+CGG 0.435294 7.2:-72432604 None:intergenic
ATCGAATCGGTTAGGGAAAC+CGG 0.437086 7.2:+72432765 MS.gene044827:CDS
TCATGCAGGCATTGGCTGCA+CGG 0.438295 7.2:+72432697 MS.gene044827:CDS
GGCCGTGCATCGAATCGGTT+AGG 0.440216 7.2:+72432757 MS.gene044827:CDS
GGAGAAATGGAGGAAGATAA+TGG 0.442415 7.2:+72433217 MS.gene044827:CDS
TAAATCACCACAAGAATTTG+TGG 0.443098 7.2:-72431078 None:intergenic
AAAATGATGAATTCACTTTG+TGG 0.443783 7.2:+72430978 None:intergenic
ATTACCTGCTCAATTCCAAT+TGG 0.449064 7.2:-72431830 None:intergenic
TTCCTTAGGATCACTGGAGT+TGG 0.451123 7.2:+72432735 MS.gene044827:CDS
GTGTTCCTGGCAATCATCTC+GGG 0.453444 7.2:+72432934 MS.gene044827:CDS
GATAGAGAGACATGAGAGGT+TGG 0.454325 7.2:+72433196 MS.gene044827:CDS
CAAAATTCTTCAAGCTATTG+TGG 0.454394 7.2:+72431617 MS.gene044827:CDS
TGCTCAATTCCAATTGGAAT+AGG 0.456239 7.2:-72431824 None:intergenic
TACTGCTCTACCTTAGCCCT+TGG 0.456368 7.2:-72433122 None:intergenic
AGCAAGAAGCAAGCCATAAC+GGG 0.462121 7.2:+72433009 MS.gene044827:CDS
GCCACGATGTTCCGAATCTC+CGG 0.464344 7.2:-72433155 None:intergenic
CCGTGTAGGCGAGGCTTTGG+CGG 0.466492 7.2:+72432887 MS.gene044827:CDS
CGTGTTCCTGGCAATCATCT+CGG 0.467483 7.2:+72432933 MS.gene044827:CDS
CGAGGCTTTGCATTACTACT+CGG 0.469216 7.2:+72433055 MS.gene044827:CDS
ACATTGAACTATCTGGTGAT+TGG 0.469373 7.2:-72431178 None:intergenic
ATGAGAGGTTGGAGAAATGG+AGG 0.478165 7.2:+72433207 MS.gene044827:CDS
TCCAAGAACTCTTCAATAGC+TGG 0.478205 7.2:-72431491 None:intergenic
AACACGGTGGAGACGGTTAA+CGG 0.479130 7.2:-72432916 None:intergenic
GCTCCGTTCCTTAGGATCAC+TGG 0.483442 7.2:+72432729 MS.gene044827:CDS
TATTCCAATTGGAATTGAGC+AGG 0.485481 7.2:+72431826 MS.gene044827:CDS
TTCCATAGGGTTTGATGGGA+AGG 0.488537 7.2:-72432520 None:intergenic
GCCTGCATTCATGCAGGCAT+TGG 0.492416 7.2:+72432689 MS.gene044827:CDS
TCCCTAACCGATTCGATGCA+CGG 0.492832 7.2:-72432759 None:intergenic
TCATGAAATCATTATCTGAA+TGG 0.494347 7.2:-72431220 None:intergenic
CCCTTCGAGTTCCACCCTGT+TGG 0.500773 7.2:+72432825 MS.gene044827:CDS
GTGTCACTATGTTTGGTGCT+TGG 0.501545 7.2:-72432980 None:intergenic
CCGCCAAAGCCTCGCCTACA+CGG 0.501971 7.2:-72432887 None:intergenic
TAACTCTGTTAAGCATCGTC+CGG 0.502256 7.2:-72432784 None:intergenic
AGTGATATGTATCATCAAAT+GGG 0.505152 7.2:+72431704 MS.gene044827:CDS
TACCTTCCCATCAAACCCTA+TGG 0.506323 7.2:+72432518 MS.gene044827:CDS
TCCTGTGGAGTCAGCACCAA+GGG 0.507337 7.2:+72433106 MS.gene044827:CDS
GGAAGATAATGGAAGGGAAA+GGG 0.523029 7.2:+72433228 MS.gene044827:CDS
AGTTGGGCCGTGCATCGAAT+CGG 0.524300 7.2:+72432752 MS.gene044827:CDS
GCCCTTGGTGCTGACTCCAC+AGG 0.524463 7.2:-72433107 None:intergenic
GCATTGGCTGCACGGCCCGG+CGG 0.530002 7.2:+72432705 MS.gene044827:CDS
CCAATGGCCTGCATTCATGC+AGG 0.532300 7.2:+72432683 MS.gene044827:CDS
TGCCAGGAACACGGTGGAGA+CGG 0.538538 7.2:-72432923 None:intergenic
AGAATCTCTAAGTGCAAGAC+TGG 0.538771 7.2:+72432410 MS.gene044827:CDS
AGACAATTTGATAGATCTTG+AGG 0.539414 7.2:-72432545 None:intergenic
GGTAGATAAACATGATGAAG+AGG 0.540118 7.2:-72432499 None:intergenic
GGACTTCCATAGGGTTTGAT+GGG 0.540263 7.2:-72432524 None:intergenic
TAGATCTTGAGGACTTCCAT+AGG 0.542142 7.2:-72432534 None:intergenic
CTAATGCAGTGACTCAATCA+AGG 0.544135 7.2:+72433273 MS.gene044827:CDS
TTGGGTTTGTATTCATGTGA+TGG 0.544918 7.2:+72433302 MS.gene044827:CDS
CGGAACATCGTGGCATGTGA+AGG 0.545048 7.2:+72433164 MS.gene044827:CDS
AAGGTTGTTTGTTGCTTGGG+TGG 0.550029 7.2:+72433345 MS.gene044827:CDS
CTAAGGAACGGAGCACCGCC+GGG 0.552205 7.2:-72432720 None:intergenic
CAAACGCCTCGAAAATGGCT+TGG 0.554574 7.2:-72432611 None:intergenic
GAGCAAGAAGCAAGCCATAA+CGG 0.555779 7.2:+72433008 MS.gene044827:CDS
GGAGTCAGCACCAAGGGCTA+AGG 0.557086 7.2:+72433112 MS.gene044827:CDS
TCTAAGTCAAATTTGAGAGA+TGG 0.557349 7.2:-72431140 None:intergenic
GCCCAACTCCAGTGATCCTA+AGG 0.558573 7.2:-72432737 None:intergenic
AGATCTTGAGGACTTCCATA+GGG 0.558587 7.2:-72432533 None:intergenic
TGTAACTATAACTATGCTCA+AGG 0.559054 7.2:+72431302 MS.gene044827:CDS
GGTAGCCTTGAAGGATATCA+AGG 0.560859 7.2:-72432662 None:intergenic
ATGGAAGGGAAAGGGTTCAA+AGG 0.562746 7.2:+72433236 MS.gene044827:CDS
GGATATCAAGGTCGATGACA+TGG 0.564199 7.2:-72432650 None:intergenic
AGGTTCCCGAGATGATTGCC+AGG 0.564807 7.2:-72432939 None:intergenic
GATCTATCAAATTGTCTACC+AGG 0.565843 7.2:+72432551 MS.gene044827:CDS
GCCGTGCATCGAATCGGTTA+GGG 0.568254 7.2:+72432758 MS.gene044827:CDS
CCAACAGGGTGGAACTCGAA+GGG 0.569813 7.2:-72432825 None:intergenic
AAATGGAGGAAGATAATGGA+AGG 0.574690 7.2:+72433221 MS.gene044827:CDS
GAGGTGGTGAACAACCTGAT+AGG 0.574741 7.2:-72431340 None:intergenic
CCATTATCGCTGCTTCTGCA+TGG 0.581952 7.2:+72433378 MS.gene044827:CDS
ACATGAAGCTACTCTTTGCA+TGG 0.581987 7.2:-72432382 None:intergenic
ACACGGCGGTTAAACTTGTG+CGG 0.583986 7.2:-72432870 None:intergenic
CCTGCATGAATGCAGGCCAT+TGG 0.587372 7.2:-72432683 None:intergenic
GTGTTACTACTCTATTGAGC+TGG 0.588376 7.2:-72432347 None:intergenic
GTTTAACCGCCGTGTAGGCG+AGG 0.589782 7.2:+72432878 MS.gene044827:CDS
GTGAATACATGCTAGCAAGA+AGG 0.591113 7.2:+72432316 MS.gene044827:CDS
TCCAACAGGGTGGAACTCGA+AGG 0.593188 7.2:-72432826 None:intergenic
TGTGCTGAAGCAGTGGCAAA+AGG 0.593207 7.2:+72432294 MS.gene044827:CDS
CTACTCTATTGAGCTGGTGT+AGG 0.595572 7.2:-72432341 None:intergenic
GAATTAAATACTCTATGAAG+TGG 0.597232 7.2:-72431425 None:intergenic
CCCTGTTGGAGAACAACTTG+AGG 0.601784 7.2:+72432839 MS.gene044827:CDS
TCTAGCATGTGCTGAAGCAG+TGG 0.602572 7.2:+72432287 MS.gene044827:CDS
CGAGATGATTGCCAGGAACA+CGG 0.603757 7.2:-72432932 None:intergenic
ATCACCAGATAGTTCAATGT+GGG 0.605621 7.2:+72431181 MS.gene044827:CDS
ATATCCTTCAAGGCTACCAA+TGG 0.609017 7.2:+72432667 MS.gene044827:CDS
AGAGGATAGAGAGACATGAG+AGG 0.611332 7.2:+72433192 MS.gene044827:CDS
AGGAAGATAATGGAAGGGAA+AGG 0.613642 7.2:+72433227 MS.gene044827:CDS
CATCGTGGCATGTGAAGGTG+AGG 0.614548 7.2:+72433169 MS.gene044827:CDS
CTTTGCATGGAGTCACCTAG+TGG 0.624018 7.2:-72432369 None:intergenic
AGAGCAGTATATATTTGCAC+CGG 0.624565 7.2:+72433136 MS.gene044827:CDS
TTCCTGTGGAGTCAGCACCA+AGG 0.627178 7.2:+72433105 MS.gene044827:CDS
AATGGAGGAAGATAATGGAA+GGG 0.644464 7.2:+72433222 MS.gene044827:CDS
ATTTGACTTAGATGGTGATG+TGG 0.646549 7.2:+72431151 MS.gene044827:CDS
AATAGAGTAGTAACACCACT+AGG 0.648126 7.2:+72432354 MS.gene044827:CDS
CCTCAAGTTGTTCTCCAACA+GGG 0.648235 7.2:-72432839 None:intergenic
CACAAGTTTAACCGCCGTGT+AGG 0.660698 7.2:+72432873 MS.gene044827:CDS
GATGACGATGATAACGATGA+TGG 0.665670 7.2:-72432477 None:intergenic
ACTCCAGTGATCCTAAGGAA+CGG 0.672214 7.2:-72432732 None:intergenic
CAACAGGGTGGAACTCGAAG+GGG 0.673995 7.2:-72432824 None:intergenic
TGGCATGTGAAGGTGAGGAG+AGG 0.683443 7.2:+72433174 MS.gene044827:CDS
ACCAAACATAGTGACACTTG+TGG 0.687522 7.2:+72432986 MS.gene044827:CDS
TATATGTAGGAACAAGACAG+TGG 0.702151 7.2:+72432243 MS.gene044827:intron
TTATTGTAAGTAGAAGCTTG+TGG 0.706364 7.2:-72431278 None:intergenic
CCAATTTGTGATGCAAAACG+AGG 0.711917 7.2:-72431359 None:intergenic
AATCACCAGATAGTTCAATG+TGG 0.716750 7.2:+72431180 MS.gene044827:CDS
TGATGGTTACAGGTTAACTG+AGG 0.719493 7.2:+72433319 MS.gene044827:CDS
CAAGTTGTTCTCCAACAGGG+TGG 0.720607 7.2:-72432836 None:intergenic
ATTTGTGATGCAAAACGAGG+TGG 0.735195 7.2:-72431356 None:intergenic
ACCGGAGATTCGGAACATCG+TGG 0.740006 7.2:+72433154 MS.gene044827:CDS
GATGATTGCCAGGAACACGG+TGG 0.742020 7.2:-72432929 None:intergenic
CCAAAGCCTCGCCTACACGG+CGG 0.759718 7.2:-72432884 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTGATTTAATTAAGATTTT+AGG - chr7.2:72431881-72431900 None:intergenic 10.0%
!! TATGTTTATTTATTCAGTTA+GGG - chr7.2:72431911-72431930 None:intergenic 15.0%
!! TTAAATAGTTAATACAGAAA+TGG - chr7.2:72432121-72432140 None:intergenic 15.0%
!! TTAGAAAAATTGCTAATAAA+TGG - chr7.2:72431950-72431969 None:intergenic 15.0%
!! TTATGTTTATTTATTCAGTT+AGG - chr7.2:72431912-72431931 None:intergenic 15.0%
!! AATAGTAATAACCAACAAAA+AGG + chr7.2:72431389-72431408 MS.gene044827:CDS 20.0%
!! ATAGTAATAACCAACAAAAA+GGG + chr7.2:72431390-72431409 MS.gene044827:CDS 20.0%
!! GCTATATATCTAATATATGT+AGG + chr7.2:72432230-72432249 MS.gene044827:intron 20.0%
!!! ATTTGTTTGATTTGAAGAAT+TGG - chr7.2:72431039-72431058 None:intergenic 20.0%
!!! TGTTGCATATATTGATTATT+TGG - chr7.2:72431452-72431471 None:intergenic 20.0%
!!! TTTGTTTGATTTGAAGAATT+GGG - chr7.2:72431038-72431057 None:intergenic 20.0%
! ACTCAATCAAGGATATTATT+GGG + chr7.2:72433284-72433303 MS.gene044827:CDS 25.0%
! AGTGATATGTATCATCAAAT+GGG + chr7.2:72431704-72431723 MS.gene044827:CDS 25.0%
! ATAGTTAATACAGAAATGGA+AGG - chr7.2:72432117-72432136 None:intergenic 25.0%
! CTATCCAAAATTGTTGATAT+TGG - chr7.2:72431587-72431606 None:intergenic 25.0%
! GAATTAAATACTCTATGAAG+TGG - chr7.2:72431428-72431447 None:intergenic 25.0%
! TCATGAAATCATTATCTGAA+TGG - chr7.2:72431223-72431242 None:intergenic 25.0%
! TTTATTTATTCAGTTAGGGA+AGG - chr7.2:72431907-72431926 None:intergenic 25.0%
!! AACTCCAATATCAACAATTT+TGG + chr7.2:72431580-72431599 MS.gene044827:CDS 25.0%
!! AAGTGTGCAAATTTTATGTA+AGG - chr7.2:72432582-72432601 None:intergenic 25.0%
!! AGTGTGCAAATTTTATGTAA+GGG - chr7.2:72432581-72432600 None:intergenic 25.0%
!! TTAGGGTTAATGTTTCTAAT+TGG - chr7.2:72431254-72431273 None:intergenic 25.0%
!!! TTTTAGGTGAAGAAAGAAAA+AGG - chr7.2:72431865-72431884 None:intergenic 25.0%
AAAAATGCCACAAATTCTTG+TGG + chr7.2:72431071-72431090 MS.gene044827:CDS 30.0%
AATAACCAACAAAAAGGGAA+AGG + chr7.2:72431395-72431414 MS.gene044827:CDS 30.0%
ACATCCAAAAAGAGTTCATA+GGG + chr7.2:72431994-72432013 MS.gene044827:intron 30.0%
AGACAATTTGATAGATCTTG+AGG - chr7.2:72432548-72432567 None:intergenic 30.0%
ATTTGAGAGATGGTAAGTTT+AGG - chr7.2:72431133-72431152 None:intergenic 30.0%
CAAAATTCTTCAAGCTATTG+TGG + chr7.2:72431617-72431636 MS.gene044827:CDS 30.0%
GACTCAATCAAGGATATTAT+TGG + chr7.2:72433283-72433302 MS.gene044827:CDS 30.0%
GAGTGATATGTATCATCAAA+TGG + chr7.2:72431703-72431722 MS.gene044827:CDS 30.0%
TAAATCACCACAAGAATTTG+TGG - chr7.2:72431081-72431100 None:intergenic 30.0%
TACATCCAAAAAGAGTTCAT+AGG + chr7.2:72431993-72432012 MS.gene044827:intron 30.0%
TATGATATTGGCATCCAAAA+AGG + chr7.2:72432063-72432082 MS.gene044827:intron 30.0%
TCTAAGTCAAATTTGAGAGA+TGG - chr7.2:72431143-72431162 None:intergenic 30.0%
TGTAACTATAACTATGCTCA+AGG + chr7.2:72431302-72431321 MS.gene044827:CDS 30.0%
TTATTGTAAGTAGAAGCTTG+TGG - chr7.2:72431281-72431300 None:intergenic 30.0%
! ATAAAGGTTGTTTGTTGCTT+GGG + chr7.2:72433342-72433361 MS.gene044827:CDS 30.0%
! GAAGAATCTACTATTTTGCA+TGG + chr7.2:72431650-72431669 MS.gene044827:CDS 30.0%
! TCTCTCAAATTTGACTTAGA+TGG + chr7.2:72431143-72431162 MS.gene044827:CDS 30.0%
!! TGATCACTTTTCATCAACAA+AGG + chr7.2:72431532-72431551 MS.gene044827:CDS 30.0%
!!! TTCTTCTGAATGTTTTGACA+TGG + chr7.2:72431556-72431575 MS.gene044827:CDS 30.0%
AATAGAGTAGTAACACCACT+AGG + chr7.2:72432354-72432373 MS.gene044827:CDS 35.0%
AATCACCAGATAGTTCAATG+TGG + chr7.2:72431180-72431199 MS.gene044827:CDS 35.0%
ACATTGAACTATCTGGTGAT+TGG - chr7.2:72431181-72431200 None:intergenic 35.0%
AGAGCAGTATATATTTGCAC+CGG + chr7.2:72433136-72433155 MS.gene044827:CDS 35.0%
ATATATTTGCACCGGAGATT+CGG + chr7.2:72433144-72433163 MS.gene044827:CDS 35.0%
ATCACCAGATAGTTCAATGT+GGG + chr7.2:72431181-72431200 MS.gene044827:CDS 35.0%
ATGCAAATTCAAAGCCTATC+AGG + chr7.2:72431326-72431345 MS.gene044827:CDS 35.0%
ATTACCTGCTCAATTCCAAT+TGG - chr7.2:72431833-72431852 None:intergenic 35.0%
CTAACAGTTCCTATTCCAAT+TGG + chr7.2:72431815-72431834 MS.gene044827:CDS 35.0%
GATCTATCAAATTGTCTACC+AGG + chr7.2:72432551-72432570 MS.gene044827:CDS 35.0%
GGACGTCGTATTTATGATAT+TGG + chr7.2:72432051-72432070 MS.gene044827:intron 35.0%
GGTAGATAAACATGATGAAG+AGG - chr7.2:72432502-72432521 None:intergenic 35.0%
GTATCATCAAATGGGATCTA+TGG + chr7.2:72431712-72431731 MS.gene044827:CDS 35.0%
TACAGGTTAACTGAGGATAA+AGG + chr7.2:72433326-72433345 MS.gene044827:CDS 35.0%
TAGAAGCTTGTGGTGAATTA+GGG - chr7.2:72431271-72431290 None:intergenic 35.0%
TATATGTAGGAACAAGACAG+TGG + chr7.2:72432243-72432262 MS.gene044827:intron 35.0%
TATTCCAATTGGAATTGAGC+AGG + chr7.2:72431826-72431845 MS.gene044827:CDS 35.0%
TGCTCAATTCCAATTGGAAT+AGG - chr7.2:72431827-72431846 None:intergenic 35.0%
TGTATTCATGTGATGGTTAC+AGG + chr7.2:72433309-72433328 MS.gene044827:CDS 35.0%
TTGGGTTTGTATTCATGTGA+TGG + chr7.2:72433302-72433321 MS.gene044827:CDS 35.0%
! ATGACCCTATGAACTCTTTT+TGG - chr7.2:72432001-72432020 None:intergenic 35.0%
! ATTTGACTTAGATGGTGATG+TGG + chr7.2:72431151-72431170 MS.gene044827:CDS 35.0%
! GAATCTACTATTTTGCATGG+TGG + chr7.2:72431653-72431672 MS.gene044827:CDS 35.0%
! GAGTTCTTGGAAGATTTTCA+AGG + chr7.2:72431503-72431522 MS.gene044827:CDS 35.0%
! GATAAAGGTTGTTTGTTGCT+TGG + chr7.2:72433341-72433360 MS.gene044827:CDS 35.0%
! GCATCTTTTGATGTTTCTCT+TGG - chr7.2:72431778-72431797 None:intergenic 35.0%
! TAAGTCCTTTCCCTTTTTGT+TGG - chr7.2:72431403-72431422 None:intergenic 35.0%
!! AAATGGAGGAAGATAATGGA+AGG + chr7.2:72433221-72433240 MS.gene044827:CDS 35.0%
!! AATGGAGGAAGATAATGGAA+GGG + chr7.2:72433222-72433241 MS.gene044827:CDS 35.0%
!! CGATGATGGTGTTAACTTTT+TGG - chr7.2:72432466-72432485 None:intergenic 35.0%
!! TGATGATGACTTGGTTGTTA+GGG - chr7.2:72432442-72432461 None:intergenic 35.0%
!! TTGATGATGACTTGGTTGTT+AGG - chr7.2:72432443-72432462 None:intergenic 35.0%
!!! CTTTTTGGTTGATGATGACT+TGG - chr7.2:72432451-72432470 None:intergenic 35.0%
AATGCAAAGCCTCGAGAAAT+CGG - chr7.2:72433049-72433068 None:intergenic 40.0%
ACATGAAGCTACTCTTTGCA+TGG - chr7.2:72432385-72432404 None:intergenic 40.0%
ACCAAACATAGTGACACTTG+TGG + chr7.2:72432986-72433005 MS.gene044827:CDS 40.0%
AGAAATCGGCCCAAAAAGTA+CGG - chr7.2:72433035-72433054 None:intergenic 40.0%
AGAATCTCTAAGTGCAAGAC+TGG + chr7.2:72432410-72432429 MS.gene044827:CDS 40.0%
AGATCTTGAGGACTTCCATA+GGG - chr7.2:72432536-72432555 None:intergenic 40.0%
ATATCCTTCAAGGCTACCAA+TGG + chr7.2:72432667-72432686 MS.gene044827:CDS 40.0%
ATCGACCTTGATATCCTTCA+AGG + chr7.2:72432657-72432676 MS.gene044827:CDS 40.0%
ATTTGTGATGCAAAACGAGG+TGG - chr7.2:72431359-72431378 None:intergenic 40.0%
CACAAGCTTTACAGCAAGAA+AGG + chr7.2:72431750-72431769 MS.gene044827:CDS 40.0%
CCAATTTGTGATGCAAAACG+AGG - chr7.2:72431362-72431381 None:intergenic 40.0%
CTAATGCAGTGACTCAATCA+AGG + chr7.2:72433273-72433292 MS.gene044827:CDS 40.0%
CTTGATTGAGTCACTGCATT+AGG - chr7.2:72433275-72433294 None:intergenic 40.0%
GATGGTAAGTTTAGGCTTTG+TGG - chr7.2:72431125-72431144 None:intergenic 40.0%
GGAGAAATGGAGGAAGATAA+TGG + chr7.2:72433217-72433236 MS.gene044827:CDS 40.0%
GGTCTCTTATCATGGATAAC+AGG - chr7.2:72432962-72432981 None:intergenic 40.0%
GTAGAAGCTTGTGGTGAATT+AGG - chr7.2:72431272-72431291 None:intergenic 40.0%
GTGAATACATGCTAGCAAGA+AGG + chr7.2:72432316-72432335 MS.gene044827:CDS 40.0%
TAGATCTTGAGGACTTCCAT+AGG - chr7.2:72432537-72432556 None:intergenic 40.0%
TCCAAGAACTCTTCAATAGC+TGG - chr7.2:72431494-72431513 None:intergenic 40.0%
TGATGGTTACAGGTTAACTG+AGG + chr7.2:72433319-72433338 MS.gene044827:CDS 40.0%
TGTTGCGTCTTCTATGTCTA+TGG + chr7.2:72432030-72432049 MS.gene044827:intron 40.0%
! ATTTTATGTAAGGGCAAGCC+TGG - chr7.2:72432572-72432591 None:intergenic 40.0%
! CCTCGTTTTGCATCACAAAT+TGG + chr7.2:72431359-72431378 MS.gene044827:CDS 40.0%
! GATGACGATGATAACGATGA+TGG - chr7.2:72432480-72432499 None:intergenic 40.0%
! GTGTTACTACTCTATTGAGC+TGG - chr7.2:72432350-72432369 None:intergenic 40.0%
! TAACTCTGTTAAGCATCGTC+CGG - chr7.2:72432787-72432806 None:intergenic 40.0%
! TCCACAAGTGTCACTATGTT+TGG - chr7.2:72432990-72433009 None:intergenic 40.0%
!! AGGAAGATAATGGAAGGGAA+AGG + chr7.2:72433227-72433246 MS.gene044827:CDS 40.0%
!! GGAAGATAATGGAAGGGAAA+GGG + chr7.2:72433228-72433247 MS.gene044827:CDS 40.0%
ACTCCAGTGATCCTAAGGAA+CGG - chr7.2:72432735-72432754 None:intergenic 45.0%
AGAGGATAGAGAGACATGAG+AGG + chr7.2:72433192-72433211 MS.gene044827:CDS 45.0%
AGCAAGAAGCAAGCCATAAC+GGG + chr7.2:72433009-72433028 MS.gene044827:CDS 45.0%
AGGACTTCCATAGGGTTTGA+TGG - chr7.2:72432528-72432547 None:intergenic 45.0%
ATCGAATCGGTTAGGGAAAC+CGG + chr7.2:72432765-72432784 MS.gene044827:CDS 45.0%
ATGAGAGGTTGGAGAAATGG+AGG + chr7.2:72433207-72433226 MS.gene044827:CDS 45.0%
ATGGAAGGGAAAGGGTTCAA+AGG + chr7.2:72433236-72433255 MS.gene044827:CDS 45.0%
CGAGGCTTTGCATTACTACT+CGG + chr7.2:72433055-72433074 MS.gene044827:CDS 45.0%
CTACTCTATTGAGCTGGTGT+AGG - chr7.2:72432344-72432363 None:intergenic 45.0%
GACATGAGAGGTTGGAGAAA+TGG + chr7.2:72433204-72433223 MS.gene044827:CDS 45.0%
GAGCAAGAAGCAAGCCATAA+CGG + chr7.2:72433008-72433027 MS.gene044827:CDS 45.0%
GATAGAGAGACATGAGAGGT+TGG + chr7.2:72433196-72433215 MS.gene044827:CDS 45.0%
GCCAGCTATTGAAGAGTTCT+TGG + chr7.2:72431490-72431509 MS.gene044827:CDS 45.0%
GCTTCCCACATTGAACTATC+TGG - chr7.2:72431188-72431207 None:intergenic 45.0%
GGACTTCCATAGGGTTTGAT+GGG - chr7.2:72432527-72432546 None:intergenic 45.0%
GGATATCAAGGTCGATGACA+TGG - chr7.2:72432653-72432672 None:intergenic 45.0%
GTCACTGCATTAGGACTTAG+AGG - chr7.2:72433266-72433285 None:intergenic 45.0%
TACCTTCCCATCAAACCCTA+TGG + chr7.2:72432518-72432537 MS.gene044827:CDS 45.0%
TCCTTAGGATCACTGGAGTT+GGG + chr7.2:72432736-72432755 MS.gene044827:CDS 45.0%
TGGCATCCAAAAAGGAACAG+CGG + chr7.2:72432071-72432090 MS.gene044827:intron 45.0%
TGGTGCTTGGTCTCTTATCA+TGG - chr7.2:72432970-72432989 None:intergenic 45.0%
TTCCATAGGGTTTGATGGGA+AGG - chr7.2:72432523-72432542 None:intergenic 45.0%
TTCCTTAGGATCACTGGAGT+TGG + chr7.2:72432735-72432754 MS.gene044827:CDS 45.0%
! AAGGTTGTTTGTTGCTTGGG+TGG + chr7.2:72433345-72433364 MS.gene044827:CDS 45.0%
! CCTCAAGTTGTTCTCCAACA+GGG - chr7.2:72432842-72432861 None:intergenic 45.0%
! CTCGGCAATTTTCGACTCTT+TGG + chr7.2:72433073-72433092 MS.gene044827:CDS 45.0%
! GGTAGCCTTGAAGGATATCA+AGG - chr7.2:72432665-72432684 None:intergenic 45.0%
! TCCTCAAGTTGTTCTCCAAC+AGG - chr7.2:72432843-72432862 None:intergenic 45.0%
!! CTCGAAAATGGCTTGGTTAG+CGG - chr7.2:72432607-72432626 None:intergenic 45.0%
!! GTGTCACTATGTTTGGTGCT+TGG - chr7.2:72432983-72433002 None:intergenic 45.0%
!!! CATAACGGGCCGTACTTTTT+GGG + chr7.2:72433023-72433042 MS.gene044827:CDS 45.0%
!!! TTTGGACGCTACTTTTCCTG+TGG + chr7.2:72433091-72433110 MS.gene044827:CDS 45.0%
AACACGGTGGAGACGGTTAA+CGG - chr7.2:72432919-72432938 None:intergenic 50.0%
ACACGGCGGTTAAACTTGTG+CGG - chr7.2:72432873-72432892 None:intergenic 50.0%
CAAACGCCTCGAAAATGGCT+TGG - chr7.2:72432614-72432633 None:intergenic 50.0%
CAAGTTGTTCTCCAACAGGG+TGG - chr7.2:72432839-72432858 None:intergenic 50.0%
CACAAGTTTAACCGCCGTGT+AGG + chr7.2:72432873-72432892 MS.gene044827:CDS 50.0%
CCATGCAGAAGCAGCGATAA+TGG - chr7.2:72433381-72433400 None:intergenic 50.0%
CCATTATCGCTGCTTCTGCA+TGG + chr7.2:72433378-72433397 MS.gene044827:CDS 50.0%
CCCTGTTGGAGAACAACTTG+AGG + chr7.2:72432839-72432858 MS.gene044827:CDS 50.0%
CGAGATGATTGCCAGGAACA+CGG - chr7.2:72432935-72432954 None:intergenic 50.0%
CGTGTTCCTGGCAATCATCT+CGG + chr7.2:72432933-72432952 MS.gene044827:CDS 50.0%
CTTTGCATGGAGTCACCTAG+TGG - chr7.2:72432372-72432391 None:intergenic 50.0%
GAGGTGGTGAACAACCTGAT+AGG - chr7.2:72431343-72431362 None:intergenic 50.0%
GTGTTCCTGGCAATCATCTC+GGG + chr7.2:72432934-72432953 MS.gene044827:CDS 50.0%
TACTGCTCTACCTTAGCCCT+TGG - chr7.2:72433125-72433144 None:intergenic 50.0%
TCTAGCATGTGCTGAAGCAG+TGG + chr7.2:72432287-72432306 MS.gene044827:CDS 50.0%
TGCCTCAAACGCCTCGAAAA+TGG - chr7.2:72432619-72432638 None:intergenic 50.0%
TGTGCTGAAGCAGTGGCAAA+AGG + chr7.2:72432294-72432313 MS.gene044827:CDS 50.0%
! CCAAAAAGTACGGCCCGTTA+TGG - chr7.2:72433025-72433044 None:intergenic 50.0%
!! AGCCATTTTCGAGGCGTTTG+AGG + chr7.2:72432614-72432633 MS.gene044827:CDS 50.0%
!! CGCTAACCAAGCCATTTTCG+AGG + chr7.2:72432605-72432624 MS.gene044827:CDS 50.0%
!! CTTTTTGGGCCGATTTCTCG+AGG + chr7.2:72433037-72433056 MS.gene044827:CDS 50.0%
!! TCCCTAACCGATTCGATGCA+CGG - chr7.2:72432762-72432781 None:intergenic 50.0%
!!! CCATAACGGGCCGTACTTTT+TGG + chr7.2:72433022-72433041 MS.gene044827:CDS 50.0%
ACCGGAGATTCGGAACATCG+TGG + chr7.2:72433154-72433173 MS.gene044827:CDS 55.0%
AGGTTCCCGAGATGATTGCC+AGG - chr7.2:72432942-72432961 None:intergenic 55.0%
AGTTGGGCCGTGCATCGAAT+CGG + chr7.2:72432752-72432771 MS.gene044827:CDS 55.0%
CAACAGGGTGGAACTCGAAG+GGG - chr7.2:72432827-72432846 None:intergenic 55.0%
CATCGTGGCATGTGAAGGTG+AGG + chr7.2:72433169-72433188 MS.gene044827:CDS 55.0%
CCAACAGGGTGGAACTCGAA+GGG - chr7.2:72432828-72432847 None:intergenic 55.0%
CCAATGGCCTGCATTCATGC+AGG + chr7.2:72432683-72432702 MS.gene044827:CDS 55.0%
CCTGCATGAATGCAGGCCAT+TGG - chr7.2:72432686-72432705 None:intergenic 55.0%
CGGAACATCGTGGCATGTGA+AGG + chr7.2:72433164-72433183 MS.gene044827:CDS 55.0%
GATGATTGCCAGGAACACGG+TGG - chr7.2:72432932-72432951 None:intergenic 55.0%
GCCAATGCCTGCATGAATGC+AGG - chr7.2:72432693-72432712 None:intergenic 55.0%
GCCACGATGTTCCGAATCTC+CGG - chr7.2:72433158-72433177 None:intergenic 55.0%
GCCCAACTCCAGTGATCCTA+AGG - chr7.2:72432740-72432759 None:intergenic 55.0%
GCCGTGCATCGAATCGGTTA+GGG + chr7.2:72432758-72432777 MS.gene044827:CDS 55.0%
GCCTGCATTCATGCAGGCAT+TGG + chr7.2:72432689-72432708 MS.gene044827:CDS 55.0%
GCTCCGTTCCTTAGGATCAC+TGG + chr7.2:72432729-72432748 MS.gene044827:CDS 55.0%
TCCAACAGGGTGGAACTCGA+AGG - chr7.2:72432829-72432848 None:intergenic 55.0%
TCCTGTGGAGTCAGCACCAA+GGG + chr7.2:72433106-72433125 MS.gene044827:CDS 55.0%
TGGCATGTGAAGGTGAGGAG+AGG + chr7.2:72433174-72433193 MS.gene044827:CDS 55.0%
TTCCTGTGGAGTCAGCACCA+AGG + chr7.2:72433105-72433124 MS.gene044827:CDS 55.0%
! CAGGCCATTGGTAGCCTTGA+AGG - chr7.2:72432674-72432693 None:intergenic 55.0%
!! TCATGCAGGCATTGGCTGCA+CGG + chr7.2:72432697-72432716 MS.gene044827:CDS 55.0%
AACCGTCTCCACCGTGTTCC+TGG + chr7.2:72432921-72432940 MS.gene044827:CDS 60.0%
GGAGTCAGCACCAAGGGCTA+AGG + chr7.2:72433112-72433131 MS.gene044827:CDS 60.0%
GGCCGTGCATCGAATCGGTT+AGG + chr7.2:72432757-72432776 MS.gene044827:CDS 60.0%
GTTTAACCGCCGTGTAGGCG+AGG + chr7.2:72432878-72432897 MS.gene044827:CDS 60.0%
TGCCAGGAACACGGTGGAGA+CGG - chr7.2:72432926-72432945 None:intergenic 60.0%
! CCCTTCGAGTTCCACCCTGT+TGG + chr7.2:72432825-72432844 MS.gene044827:CDS 60.0%
! GCTGCGCCGCTGTTCCTTTT+TGG - chr7.2:72432080-72432099 None:intergenic 60.0%
CCAAAGCCTCGCCTACACGG+CGG - chr7.2:72432887-72432906 None:intergenic 65.0%
CCGCCAAAGCCTCGCCTACA+CGG - chr7.2:72432890-72432909 None:intergenic 65.0%
! CCGTGTAGGCGAGGCTTTGG+CGG + chr7.2:72432887-72432906 MS.gene044827:CDS 65.0%
!! CCTAAGGAACGGAGCACCGC+CGG - chr7.2:72432724-72432743 None:intergenic 65.0%
!! CTAAGGAACGGAGCACCGCC+GGG - chr7.2:72432723-72432742 None:intergenic 65.0%
!! GCCCTTGGTGCTGACTCCAC+AGG - chr7.2:72433110-72433129 None:intergenic 65.0%
CCGCCGTGTAGGCGAGGCTT+TGG + chr7.2:72432884-72432903 MS.gene044827:CDS 70.0%
CCGGCGGTGCTCCGTTCCTT+AGG + chr7.2:72432721-72432740 MS.gene044827:CDS 70.0%
!! CAGGCATTGGCTGCACGGCC+CGG + chr7.2:72432702-72432721 MS.gene044827:CDS 70.0%
!! GCATTGGCTGCACGGCCCGG+CGG + chr7.2:72432705-72432724 MS.gene044827:CDS 75.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 72430981 72433409 72430981 ID=MS.gene044827
chr7.2 mRNA 72430981 72433409 72430981 ID=MS.gene044827.t1;Parent=MS.gene044827
chr7.2 exon 72430981 72431847 72430981 ID=MS.gene044827.t1.exon1;Parent=MS.gene044827.t1
chr7.2 CDS 72430981 72431847 72430981 ID=cds.MS.gene044827.t1;Parent=MS.gene044827.t1
chr7.2 exon 72432252 72433409 72432252 ID=MS.gene044827.t1.exon2;Parent=MS.gene044827.t1
chr7.2 CDS 72432252 72433409 72432252 ID=cds.MS.gene044827.t1;Parent=MS.gene044827.t1
Gene Sequence

>MS.gene044827

ATGATGAATTCACTTTGTGGAAGCTCAAATTCTCTCAAAGAAAAATGTCTTCAACCCAATTCTTCAAATCAAACAAATACACACTCAAAGAAAAATGCCACAAATTCTTGTGGTGATTTAGAGCAAATTAATGTTCTAACTCCACAAAGCCTAAACTTACCATCTCTCAAATTTGACTTAGATGGTGATGTGGAAGTCCAATCACCAGATAGTTCAATGTGGGAAGCATTTTTCAATGACCATTCAGATAATGATTTCATGATATCATCACCAATTAGAAACATTAACCCTAATTCACCACAAGCTTCTACTTACAATAATTGTAACTATAACTATGCTCAAGGCATGCAAATTCAAAGCCTATCAGGTTGTTCACCACCTCGTTTTGCATCACAAATTGGTTCATTAAATAGTAATAACCAACAAAAAGGGAAAGGACTTAGTCCACTTCATAGAGTATTTAATTCACCAAATAATCAATATATGCAACATGTTGAAAATCTTTCGTTGCCAGCTATTGAAGAGTTCTTGGAAGATTTTCAAGGTGATGTTGATCACTTTTCATCAACAAAGGTTTCTTCTGAATGTTTTGACATGGAAACTCCAATATCAACAATTTTGGATAGTTTAACAATGCAAAATTCTTCAAGCTATTGTGGTTCAGTTAATGAAGAATCTACTATTTTGCATGGTGGTAATTCTTCTTCTCAACTTTCTCAAGAGAGTGATATGTATCATCAAATGGGATCTATGGCTAGTGCTTCTCTTTCACAAGCTTTACAGCAAGAAAGGTACCAAGAGAAACATCAAAAGATGCAAGCTCAACAACAGAGTCTAACAGTTCCTATTCCAATTGGAATTGAGCAGGTAATAAAATCTTTCCTTTTTCTTTCTTCACCTAAAATCTTAATTAAATCAAAATTCCTTCCCTAACTGAATAAATAAACATAATCAATACACAATCTACCATTTATTAGCAATTTTTCTAATTCAATTTGACTGTCTAACGATGTACATCCAAAAAGAGTTCATAGGGTCATGCATAACAATGTTGCGTCTTCTATGTCTATGGACGTCGTATTTATGATATTGGCATCCAAAAAGGAACAGCGGCGCAGCTTATTGCTTGCTTGCCTTCCATTTCTGTATTAACTATTTAATTTTTGATGTACATCTGAATGATCATGATCTAGACAAATATATTTTAATTAATTTACAAGATTTATTTTTATGATTTCTAAACTTAAAAGCTATATATCTAATATATGTAGGAACAAGACAGTGGACTTCAACTAGTGCACTTACTTCTAGCATGTGCTGAAGCAGTGGCAAAAGGTGAATACATGCTAGCAAGAAGGTACCTACACCAGCTCAATAGAGTAGTAACACCACTAGGTGACTCCATGCAAAGAGTAGCTTCATGTTTCACAGAATCTCTAAGTGCAAGACTGGCTGCAACCCTAACAACCAAGTCATCATCAACCAAAAAGTTAACACCATCATCGTTATCATCGTCATCCTCTTCATCATGTTTATCTACCTTCCCATCAAACCCTATGGAAGTCCTCAAGATCTATCAAATTGTCTACCAGGCTTGCCCTTACATAAAATTTGCACACTTTACCGCTAACCAAGCCATTTTCGAGGCGTTTGAGGCAGAAGAACGTGTCCATGTCATCGACCTTGATATCCTTCAAGGCTACCAATGGCCTGCATTCATGCAGGCATTGGCTGCACGGCCCGGCGGTGCTCCGTTCCTTAGGATCACTGGAGTTGGGCCGTGCATCGAATCGGTTAGGGAAACCGGACGATGCTTAACAGAGTTAGCTCATTCTCTTCGTATCCCCTTCGAGTTCCACCCTGTTGGAGAACAACTTGAGGATCTAAAACCGCACAAGTTTAACCGCCGTGTAGGCGAGGCTTTGGCGGTTAACACCGTTAACCGTCTCCACCGTGTTCCTGGCAATCATCTCGGGAACCTGTTATCCATGATAAGAGACCAAGCACCAAACATAGTGACACTTGTGGAGCAAGAAGCAAGCCATAACGGGCCGTACTTTTTGGGCCGATTTCTCGAGGCTTTGCATTACTACTCGGCAATTTTCGACTCTTTGGACGCTACTTTTCCTGTGGAGTCAGCACCAAGGGCTAAGGTAGAGCAGTATATATTTGCACCGGAGATTCGGAACATCGTGGCATGTGAAGGTGAGGAGAGGATAGAGAGACATGAGAGGTTGGAGAAATGGAGGAAGATAATGGAAGGGAAAGGGTTCAAAGGAGTGCCTCTAAGTCCTAATGCAGTGACTCAATCAAGGATATTATTGGGTTTGTATTCATGTGATGGTTACAGGTTAACTGAGGATAAAGGTTGTTTGTTGCTTGGGTGGCAAGACAGAGCCATTATCGCTGCTTCTGCATGGCGATGCTGA
Protein sequence

>MS.gene044827.t1

MMNSLCGSSNSLKEKCLQPNSSNQTNTHSKKNATNSCGDLEQINVLTPQSLNLPSLKFDLDGDVEVQSPDSSMWEAFFNDHSDNDFMISSPIRNINPNSPQASTYNNCNYNYAQGMQIQSLSGCSPPRFASQIGSLNSNNQQKGKGLSPLHRVFNSPNNQYMQHVENLSLPAIEEFLEDFQGDVDHFSSTKVSSECFDMETPISTILDSLTMQNSSSYCGSVNEESTILHGGNSSSQLSQESDMYHQMGSMASASLSQALQQERYQEKHQKMQAQQQSLTVPIPIGIEQEQDSGLQLVHLLLACAEAVAKGEYMLARRYLHQLNRVVTPLGDSMQRVASCFTESLSARLAATLTTKSSSTKKLTPSSLSSSSSSSCLSTFPSNPMEVLKIYQIVYQACPYIKFAHFTANQAIFEAFEAEERVHVIDLDILQGYQWPAFMQALAARPGGAPFLRITGVGPCIESVRETGRCLTELAHSLRIPFEFHPVGEQLEDLKPHKFNRRVGEALAVNTVNRLHRVPGNHLGNLLSMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPVESAPRAKVEQYIFAPEIRNIVACEGEERIERHERLEKWRKIMEGKGFKGVPLSPNAVTQSRILLGLYSCDGYRLTEDKGCLLLGWQDRAIIAASAWRC