Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene044843.t1 | AES78253.1 | 88.7 | 460 | 47 | 1 | 1 | 455 | 69 | 528 | 1.20E-222 | 782.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene044843.t1 | Q5N6V8 | 35.5 | 200 | 88 | 5 | 1 | 165 | 88 | 281 | 5.4e-22 | 107.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene044843.t1 | G7L033 | 88.7 | 460 | 47 | 1 | 1 | 455 | 69 | 528 | 8.6e-223 | 782.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene044843.t1 | TF | GARP-G2-like |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene044843.t1 | MTR_7g026400 | 89.348 | 460 | 44 | 1 | 1 | 455 | 69 | 528 | 0.0 | 783 |
MS.gene044843.t1 | MTR_0450s0040 | 49.158 | 297 | 109 | 6 | 1 | 296 | 86 | 341 | 2.13e-73 | 234 |
MS.gene044843.t1 | MTR_2g034960 | 41.401 | 157 | 80 | 4 | 1 | 145 | 111 | 267 | 1.39e-27 | 116 |
MS.gene044843.t1 | MTR_4g121020 | 36.478 | 159 | 87 | 2 | 1 | 145 | 9 | 167 | 5.99e-27 | 114 |
MS.gene044843.t1 | MTR_4g121020 | 25.822 | 426 | 223 | 12 | 1 | 352 | 113 | 519 | 9.93e-27 | 114 |
MS.gene044843.t1 | MTR_4g121020 | 25.822 | 426 | 223 | 12 | 1 | 352 | 113 | 519 | 1.13e-26 | 113 |
MS.gene044843.t1 | MTR_6g088950 | 62.222 | 90 | 32 | 2 | 1 | 88 | 86 | 175 | 1.01e-25 | 104 |
MS.gene044843.t1 | MTR_1g013170 | 36.095 | 169 | 78 | 3 | 2 | 147 | 88 | 249 | 1.80e-25 | 109 |
MS.gene044843.t1 | MTR_1g032570 | 35.079 | 191 | 99 | 6 | 1 | 167 | 24 | 213 | 2.63e-25 | 108 |
MS.gene044843.t1 | MTR_4g021760 | 36.310 | 168 | 94 | 4 | 1 | 166 | 92 | 248 | 3.54e-25 | 105 |
MS.gene044843.t1 | MTR_8g079940 | 35.912 | 181 | 98 | 5 | 1 | 163 | 107 | 287 | 4.83e-25 | 108 |
MS.gene044843.t1 | MTR_1g032570 | 35.079 | 191 | 99 | 6 | 1 | 167 | 93 | 282 | 7.10e-25 | 108 |
MS.gene044843.t1 | MTR_3g086100 | 33.493 | 209 | 111 | 6 | 1 | 184 | 24 | 229 | 1.29e-24 | 106 |
MS.gene044843.t1 | MTR_3g086100 | 33.493 | 209 | 111 | 6 | 1 | 184 | 95 | 300 | 4.67e-24 | 105 |
MS.gene044843.t1 | MTR_3g106220 | 37.143 | 175 | 81 | 5 | 9 | 156 | 98 | 270 | 5.10e-24 | 105 |
MS.gene044843.t1 | MTR_4g021855 | 38.255 | 149 | 73 | 2 | 1 | 145 | 91 | 224 | 8.37e-24 | 101 |
MS.gene044843.t1 | MTR_7g117705 | 34.524 | 168 | 81 | 3 | 2 | 147 | 89 | 249 | 8.41e-24 | 103 |
MS.gene044843.t1 | MTR_4g021790 | 37.584 | 149 | 74 | 2 | 1 | 145 | 91 | 224 | 2.36e-23 | 99.8 |
MS.gene044843.t1 | MTR_4g021845 | 36.620 | 142 | 71 | 2 | 1 | 138 | 91 | 217 | 3.33e-23 | 97.8 |
MS.gene044843.t1 | MTR_2g450070 | 33.708 | 178 | 87 | 4 | 8 | 156 | 107 | 282 | 6.65e-23 | 102 |
MS.gene044843.t1 | MTR_2g450070 | 33.708 | 178 | 87 | 4 | 8 | 156 | 107 | 282 | 1.01e-22 | 101 |
MS.gene044843.t1 | MTR_4g131600 | 32.353 | 204 | 114 | 3 | 10 | 189 | 111 | 314 | 1.42e-21 | 97.8 |
MS.gene044843.t1 | MTR_4g131580 | 35.849 | 159 | 89 | 2 | 10 | 155 | 108 | 266 | 2.31e-21 | 97.4 |
MS.gene044843.t1 | MTR_1g013180 | 35.928 | 167 | 77 | 3 | 2 | 145 | 239 | 398 | 3.92e-21 | 96.7 |
MS.gene044843.t1 | MTR_3g102590 | 34.965 | 143 | 57 | 2 | 1 | 143 | 91 | 197 | 4.92e-21 | 92.0 |
MS.gene044843.t1 | MTR_3g102600 | 31.126 | 151 | 58 | 2 | 1 | 151 | 41 | 145 | 1.92e-20 | 89.0 |
MS.gene044843.t1 | MTR_3g102600 | 31.126 | 151 | 58 | 2 | 1 | 151 | 90 | 194 | 5.15e-20 | 89.0 |
MS.gene044843.t1 | MTR_6g089050 | 61.905 | 63 | 24 | 0 | 1 | 63 | 32 | 94 | 1.09e-19 | 86.3 |
MS.gene044843.t1 | MTR_4g131570 | 32.571 | 175 | 102 | 3 | 10 | 168 | 108 | 282 | 1.79e-19 | 91.7 |
MS.gene044843.t1 | MTR_6g045327 | 33.750 | 160 | 76 | 2 | 1 | 151 | 96 | 234 | 6.41e-19 | 88.6 |
MS.gene044843.t1 | MTR_4g064730 | 42.857 | 112 | 48 | 4 | 66 | 167 | 101 | 206 | 8.54e-19 | 87.4 |
MS.gene044843.t1 | MTR_7g089010 | 49.296 | 71 | 36 | 0 | 78 | 148 | 80 | 150 | 3.14e-18 | 85.5 |
MS.gene044843.t1 | MTR_3g102590 | 33.333 | 138 | 56 | 2 | 1 | 138 | 91 | 192 | 3.23e-18 | 83.2 |
MS.gene044843.t1 | MTR_0054s0010 | 57.143 | 63 | 27 | 0 | 1 | 63 | 21 | 83 | 4.98e-17 | 78.6 |
MS.gene044843.t1 | MTR_3g102600 | 29.286 | 140 | 53 | 2 | 1 | 140 | 41 | 134 | 3.45e-16 | 75.5 |
MS.gene044843.t1 | MTR_3g102600 | 30.303 | 132 | 46 | 2 | 9 | 140 | 98 | 183 | 3.39e-15 | 74.3 |
MS.gene044843.t1 | MTR_4g078810 | 61.111 | 54 | 21 | 0 | 88 | 141 | 157 | 210 | 5.04e-15 | 77.0 |
MS.gene044843.t1 | MTR_2g090675 | 61.111 | 54 | 21 | 0 | 88 | 141 | 160 | 213 | 1.20e-14 | 75.9 |
MS.gene044843.t1 | MTR_8g105600 | 31.288 | 163 | 82 | 3 | 1 | 144 | 91 | 242 | 2.76e-14 | 75.5 |
MS.gene044843.t1 | MTR_5g014040 | 53.333 | 60 | 28 | 0 | 88 | 147 | 310 | 369 | 4.15e-14 | 74.7 |
MS.gene044843.t1 | MTR_4g098870 | 50.794 | 63 | 31 | 0 | 88 | 150 | 309 | 371 | 4.93e-14 | 74.7 |
MS.gene044843.t1 | MTR_4g098870 | 50.794 | 63 | 31 | 0 | 88 | 150 | 329 | 391 | 5.42e-14 | 74.3 |
MS.gene044843.t1 | MTR_4g098870 | 50.794 | 63 | 31 | 0 | 88 | 150 | 309 | 371 | 5.73e-14 | 74.3 |
MS.gene044843.t1 | MTR_4g098870 | 50.794 | 63 | 31 | 0 | 88 | 150 | 329 | 391 | 6.19e-14 | 74.3 |
MS.gene044843.t1 | MTR_4g098870 | 50.794 | 63 | 31 | 0 | 88 | 150 | 348 | 410 | 6.31e-14 | 74.3 |
MS.gene044843.t1 | MTR_5g014040 | 49.231 | 65 | 28 | 1 | 88 | 147 | 270 | 334 | 3.70e-12 | 68.6 |
MS.gene044843.t1 | MTR_5g014040 | 49.231 | 65 | 28 | 1 | 88 | 147 | 310 | 374 | 4.14e-12 | 68.6 |
MS.gene044843.t1 | MTR_5g041350 | 54.545 | 55 | 24 | 1 | 89 | 142 | 15 | 69 | 1.14e-11 | 66.2 |
MS.gene044843.t1 | MTR_6g032990 | 54.545 | 55 | 24 | 1 | 89 | 142 | 42 | 96 | 1.46e-11 | 66.2 |
MS.gene044843.t1 | MTR_4g086835 | 44.444 | 63 | 35 | 0 | 85 | 147 | 270 | 332 | 4.89e-11 | 64.7 |
MS.gene044843.t1 | MTR_2g086450 | 50.909 | 55 | 26 | 1 | 89 | 142 | 45 | 99 | 7.32e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene044843.t1 | AT3G16857 | 36.275 | 204 | 88 | 5 | 1 | 168 | 45 | 242 | 1.41e-29 | 122 |
MS.gene044843.t1 | AT3G16857 | 36.275 | 204 | 88 | 5 | 1 | 168 | 115 | 312 | 3.38e-29 | 121 |
MS.gene044843.t1 | AT3G16857 | 36.275 | 204 | 88 | 5 | 1 | 168 | 115 | 312 | 3.40e-29 | 121 |
MS.gene044843.t1 | AT5G07210 | 36.923 | 195 | 82 | 5 | 12 | 165 | 104 | 298 | 1.58e-25 | 110 |
MS.gene044843.t1 | AT5G07210 | 36.923 | 195 | 82 | 5 | 12 | 165 | 112 | 306 | 1.66e-25 | 110 |
MS.gene044843.t1 | AT2G01760 | 37.126 | 167 | 83 | 3 | 1 | 145 | 25 | 191 | 4.96e-24 | 102 |
MS.gene044843.t1 | AT4G31920 | 34.868 | 152 | 99 | 0 | 1 | 152 | 95 | 246 | 1.25e-23 | 103 |
MS.gene044843.t1 | AT2G25180 | 37.736 | 159 | 87 | 2 | 1 | 147 | 95 | 253 | 1.86e-23 | 103 |
MS.gene044843.t1 | AT2G01760 | 37.126 | 167 | 83 | 3 | 1 | 145 | 90 | 256 | 2.72e-23 | 101 |
MS.gene044843.t1 | AT2G01760 | 37.725 | 167 | 82 | 4 | 1 | 145 | 118 | 284 | 6.37e-23 | 100 |
MS.gene044843.t1 | AT5G58080 | 35.443 | 158 | 77 | 3 | 10 | 149 | 104 | 254 | 2.90e-22 | 100 |
MS.gene044843.t1 | AT2G27070 | 34.466 | 206 | 92 | 5 | 1 | 165 | 98 | 301 | 1.62e-21 | 97.8 |
MS.gene044843.t1 | AT1G67710 | 36.158 | 177 | 92 | 5 | 1 | 156 | 24 | 200 | 2.70e-20 | 93.6 |
MS.gene044843.t1 | AT1G67710 | 36.158 | 177 | 92 | 5 | 1 | 156 | 15 | 191 | 3.01e-20 | 93.2 |
MS.gene044843.t1 | AT1G67710 | 36.158 | 177 | 92 | 5 | 1 | 156 | 89 | 265 | 5.47e-20 | 92.8 |
MS.gene044843.t1 | AT5G59570 | 38.053 | 113 | 59 | 2 | 47 | 148 | 88 | 200 | 9.00e-19 | 87.0 |
MS.gene044843.t1 | AT5G59570 | 38.053 | 113 | 59 | 2 | 47 | 148 | 88 | 200 | 9.00e-19 | 87.0 |
MS.gene044843.t1 | AT3G10760 | 47.887 | 71 | 37 | 0 | 78 | 148 | 94 | 164 | 1.52e-18 | 87.0 |
MS.gene044843.t1 | AT5G05090 | 49.275 | 69 | 35 | 0 | 77 | 145 | 69 | 137 | 3.44e-18 | 84.7 |
MS.gene044843.t1 | AT3G46640 | 49.296 | 71 | 34 | 1 | 80 | 148 | 133 | 203 | 4.44e-18 | 85.5 |
MS.gene044843.t1 | AT3G46640 | 49.296 | 71 | 34 | 1 | 80 | 148 | 133 | 203 | 4.44e-18 | 85.5 |
MS.gene044843.t1 | AT5G49240 | 32.484 | 157 | 83 | 3 | 1 | 138 | 120 | 272 | 4.48e-18 | 84.7 |
MS.gene044843.t1 | AT2G40970 | 50.725 | 69 | 34 | 0 | 80 | 148 | 96 | 164 | 5.11e-18 | 84.0 |
MS.gene044843.t1 | AT3G46640 | 49.296 | 71 | 34 | 1 | 80 | 148 | 133 | 203 | 7.39e-18 | 84.7 |
MS.gene044843.t1 | AT5G44190 | 62.295 | 61 | 21 | 1 | 81 | 141 | 141 | 199 | 9.82e-17 | 82.0 |
MS.gene044843.t1 | AT5G44190 | 59.091 | 66 | 24 | 2 | 77 | 141 | 136 | 199 | 1.08e-16 | 81.6 |
MS.gene044843.t1 | AT3G62670 | 35.526 | 152 | 87 | 5 | 1 | 141 | 117 | 268 | 2.10e-15 | 78.6 |
MS.gene044843.t1 | AT2G20570 | 59.259 | 54 | 22 | 0 | 88 | 141 | 152 | 205 | 2.14e-14 | 75.1 |
MS.gene044843.t1 | AT2G20570 | 60.784 | 51 | 20 | 0 | 91 | 141 | 171 | 221 | 1.20e-13 | 73.2 |
MS.gene044843.t1 | AT4G18020 | 54.717 | 53 | 24 | 0 | 89 | 141 | 296 | 348 | 2.95e-13 | 72.0 |
MS.gene044843.t1 | AT4G18020 | 54.717 | 53 | 24 | 0 | 89 | 141 | 296 | 348 | 2.95e-13 | 72.0 |
MS.gene044843.t1 | AT4G18020 | 54.717 | 53 | 24 | 0 | 89 | 141 | 296 | 348 | 2.95e-13 | 72.0 |
MS.gene044843.t1 | AT4G18020 | 54.717 | 53 | 24 | 0 | 89 | 141 | 296 | 348 | 2.95e-13 | 72.0 |
MS.gene044843.t1 | AT4G18020 | 54.717 | 53 | 24 | 0 | 89 | 141 | 296 | 348 | 2.95e-13 | 72.0 |
MS.gene044843.t1 | AT4G18020 | 54.717 | 53 | 24 | 0 | 89 | 141 | 296 | 348 | 2.95e-13 | 72.0 |
MS.gene044843.t1 | AT4G18020 | 54.717 | 53 | 24 | 0 | 89 | 141 | 296 | 348 | 2.96e-13 | 72.0 |
MS.gene044843.t1 | AT4G18020 | 54.717 | 53 | 24 | 0 | 89 | 141 | 296 | 348 | 2.96e-13 | 72.0 |
MS.gene044843.t1 | AT4G18020 | 54.717 | 53 | 24 | 0 | 89 | 141 | 296 | 348 | 2.96e-13 | 72.0 |
MS.gene044843.t1 | AT4G18020 | 54.717 | 53 | 24 | 0 | 89 | 141 | 296 | 348 | 2.96e-13 | 72.0 |
MS.gene044843.t1 | AT4G18020 | 54.717 | 53 | 24 | 0 | 89 | 141 | 296 | 348 | 2.96e-13 | 72.0 |
MS.gene044843.t1 | AT1G49190 | 31.548 | 168 | 90 | 6 | 1 | 146 | 112 | 276 | 6.04e-12 | 67.8 |
MS.gene044843.t1 | AT3G04450 | 52.632 | 57 | 26 | 1 | 86 | 141 | 235 | 291 | 1.15e-11 | 66.2 |
MS.gene044843.t1 | AT3G04450 | 46.479 | 71 | 31 | 2 | 86 | 149 | 235 | 305 | 1.76e-11 | 66.2 |
MS.gene044843.t1 | AT3G04450 | 46.479 | 71 | 31 | 2 | 86 | 149 | 195 | 265 | 1.81e-11 | 66.2 |
MS.gene044843.t1 | AT3G04450 | 46.479 | 71 | 31 | 2 | 86 | 149 | 195 | 265 | 1.81e-11 | 66.2 |
MS.gene044843.t1 | AT3G04030 | 52.727 | 55 | 25 | 1 | 89 | 142 | 45 | 99 | 2.99e-11 | 65.5 |
MS.gene044843.t1 | AT3G04030 | 52.727 | 55 | 25 | 1 | 89 | 142 | 45 | 99 | 3.20e-11 | 65.5 |
MS.gene044843.t1 | AT5G29000 | 40.506 | 79 | 46 | 1 | 86 | 163 | 185 | 263 | 3.36e-11 | 65.1 |
MS.gene044843.t1 | AT5G29000 | 40.506 | 79 | 46 | 1 | 86 | 163 | 185 | 263 | 3.36e-11 | 65.1 |
MS.gene044843.t1 | AT5G29000 | 40.506 | 79 | 46 | 1 | 86 | 163 | 228 | 306 | 3.65e-11 | 65.1 |
MS.gene044843.t1 | AT5G29000 | 44.286 | 70 | 38 | 1 | 86 | 154 | 228 | 297 | 3.96e-11 | 64.3 |
MS.gene044843.t1 | AT3G04030 | 50.000 | 54 | 27 | 0 | 89 | 142 | 45 | 98 | 7.72e-11 | 64.3 |
Find 73 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGATTCTATTTCAAATATT+AGG | 0.152381 | 7.2:+72842421 | MS.gene044843:CDS |
CTGAAGACTTCAAAGATATT+TGG | 0.172247 | 7.2:+72840029 | MS.gene044843:CDS |
GAACTATGAACAATGGATTA+AGG | 0.243060 | 7.2:+72842298 | MS.gene044843:CDS |
ACTTACTTTCCAATCCAATT+TGG | 0.246719 | 7.2:-72840267 | None:intergenic |
AGGATTGGCTCTTCAAGATT+TGG | 0.255717 | 7.2:+72841900 | MS.gene044843:CDS |
CTGCTTGCTATTAACCAAAT+TGG | 0.262572 | 7.2:+72840253 | MS.gene044843:CDS |
GGATTCTATTTCAAATATTA+GGG | 0.276070 | 7.2:+72842422 | MS.gene044843:CDS |
GTAAGAAACGATAATCCTTT+TGG | 0.277733 | 7.2:+72842237 | MS.gene044843:CDS |
AAATGTAGCAAGTCACTTAC+AGG | 0.277878 | 7.2:+72841472 | MS.gene044843:CDS |
CAACATGATGTGTTGGAAAT+TGG | 0.289454 | 7.2:-72841855 | None:intergenic |
ATCTCAAAGACGCTAGAAAA+TGG | 0.291584 | 7.2:+72839974 | MS.gene044843:CDS |
TTTGGAATTCAGCTGAATAA+TGG | 0.295030 | 7.2:+72842255 | MS.gene044843:CDS |
CAATTCCCTTATATACAAAA+AGG | 0.300716 | 7.2:+72841880 | MS.gene044843:CDS |
TTAAGAAACAAAAGCTTGTT+TGG | 0.309580 | 7.2:+72840206 | MS.gene044843:CDS |
TTGAAGTCTTCAGCACAAAA+AGG | 0.324880 | 7.2:-72840019 | None:intergenic |
AACAATGGATTAAGGGCTTC+TGG | 0.336654 | 7.2:+72842306 | MS.gene044843:CDS |
TTTCCTCAACATAAATTAGA+TGG | 0.338476 | 7.2:+72842513 | MS.gene044843:CDS |
GGATCTTTGATAAGCACTAA+TGG | 0.346236 | 7.2:+72842189 | MS.gene044843:CDS |
AGATATTTGGAAATATGTTA+TGG | 0.355548 | 7.2:+72840042 | MS.gene044843:CDS |
CACCTCTTGTTTGATATGCC+AGG | 0.356901 | 7.2:-72841807 | None:intergenic |
AACTATGAACAATGGATTAA+GGG | 0.373260 | 7.2:+72842299 | MS.gene044843:CDS |
GGTTTGGTTCAAGGAGGGTT+TGG | 0.375726 | 7.2:+72842396 | MS.gene044843:CDS |
GGAGCAGAAATGGTTGGAAT+TGG | 0.379114 | 7.2:+72842276 | MS.gene044843:CDS |
TGCTATTAACCAAATTGGAT+TGG | 0.390260 | 7.2:+72840258 | MS.gene044843:CDS |
GGCCATGGTCAAAACAGGTT+TGG | 0.410656 | 7.2:+72841979 | MS.gene044843:CDS |
GAAAATGAGCAAAAGTATAA+TGG | 0.418138 | 7.2:+72842546 | MS.gene044843:CDS |
TAGAGGTGAACAAGGATTGA+TGG | 0.418771 | 7.2:+72842080 | MS.gene044843:CDS |
GTGTTGGAAATTGGTTGAAA+TGG | 0.423793 | 7.2:-72841846 | None:intergenic |
GGCTCTTCAAGATTTGGAAC+AGG | 0.426933 | 7.2:+72841906 | MS.gene044843:CDS |
GCTGAATAATGGAGCAGAAA+TGG | 0.428747 | 7.2:+72842266 | MS.gene044843:CDS |
CTGCGAGATGTTGAAGAGAA+AGG | 0.429447 | 7.2:+72841652 | MS.gene044843:CDS |
TTCAAGATTTGGAACAGGTT+AGG | 0.432005 | 7.2:+72841911 | MS.gene044843:CDS |
CAGTGATGTCTGAAGACAAT+AGG | 0.437039 | 7.2:+72839942 | None:intergenic |
ATAATGGCCATGGTCAAAAC+AGG | 0.444362 | 7.2:+72841974 | MS.gene044843:CDS |
GGTTCAAGGAGGGTTTGGTC+TGG | 0.452214 | 7.2:+72842401 | MS.gene044843:CDS |
GATGTTGTTGCGGAGAATAA+TGG | 0.456575 | 7.2:+72841958 | MS.gene044843:CDS |
TGGTTCTACTTTCACTAATG+AGG | 0.465096 | 7.2:+72842566 | MS.gene044843:CDS |
AGCGTCTTTGAGATTAAACT+TGG | 0.469430 | 7.2:-72839965 | None:intergenic |
CTTCTTCAAGTTTCTTAACA+AGG | 0.470322 | 7.2:+72842109 | MS.gene044843:CDS |
GATTTGGAACAGGTTAGGCT+TGG | 0.482764 | 7.2:+72841916 | MS.gene044843:CDS |
TGGTGCAAATAACAATGAAA+GGG | 0.489301 | 7.2:+72842326 | MS.gene044843:CDS |
GCAGGATCAGTTAATAATGA+AGG | 0.491730 | 7.2:+72842468 | MS.gene044843:CDS |
GTTGAAGAGAAAGGAATGGT+TGG | 0.491902 | 7.2:+72841661 | MS.gene044843:CDS |
CTGGTGCAAATAACAATGAA+AGG | 0.495858 | 7.2:+72842325 | MS.gene044843:CDS |
CTTGAATATCTCTCTCTCCT+TGG | 0.495918 | 7.2:-72840180 | None:intergenic |
ACCTCTTGTTTGATATGCCA+GGG | 0.497863 | 7.2:-72841806 | None:intergenic |
TCAAATATTAGGGGAGGGAG+TGG | 0.500534 | 7.2:+72842432 | MS.gene044843:CDS |
TTTCCATCTAATTTATGTTG+AGG | 0.508389 | 7.2:-72842516 | None:intergenic |
TAGGCTTGGAAAATCAAAGT+TGG | 0.508790 | 7.2:+72841930 | MS.gene044843:CDS |
ATTTCTCTGATCACAGAACT+TGG | 0.510262 | 7.2:-72841730 | None:intergenic |
GTTTGCAAATATTGAAGTGT+TGG | 0.515294 | 7.2:-72841784 | None:intergenic |
ACATCAGAAGTAAACTTATG+AGG | 0.520784 | 7.2:-72842216 | None:intergenic |
AACTAGTGGAAGCACCATCA+TGG | 0.526216 | 7.2:-72842047 | None:intergenic |
TAAATTAGATGGAAATGTTG+TGG | 0.531191 | 7.2:+72842524 | MS.gene044843:CDS |
TTCTTCAAGTTTCTTAACAA+GGG | 0.536372 | 7.2:+72842110 | MS.gene044843:CDS |
TTATTCAGCTGAATTCCAAA+AGG | 0.546390 | 7.2:-72842252 | None:intergenic |
AATAATGGAGCAGAAATGGT+TGG | 0.555811 | 7.2:+72842270 | MS.gene044843:CDS |
TCTATTTCAAATATTAGGGG+AGG | 0.562372 | 7.2:+72842426 | MS.gene044843:CDS |
GTTGGAAGCCGATGTTGTTG+CGG | 0.566366 | 7.2:+72841948 | MS.gene044843:CDS |
GAAGAGAAAGGAATGGTTGG+AGG | 0.566539 | 7.2:+72841664 | MS.gene044843:CDS |
AGTGGAAGAGAGTTTCTAGC+AGG | 0.567708 | 7.2:+72842450 | MS.gene044843:CDS |
CTATTTCAAATATTAGGGGA+GGG | 0.570948 | 7.2:+72842427 | MS.gene044843:CDS |
ATTATTCTCCGCAACAACAT+CGG | 0.578561 | 7.2:-72841956 | None:intergenic |
GGAATTGGAACTATGAACAA+TGG | 0.591999 | 7.2:+72842291 | MS.gene044843:CDS |
AATTGGTCAACATGATGTGT+TGG | 0.598362 | 7.2:-72841862 | None:intergenic |
TCATCATATAGAGGTGAACA+AGG | 0.599585 | 7.2:+72842072 | MS.gene044843:CDS |
AGAAAGAGTAAAGAATGCCA+AGG | 0.604346 | 7.2:+72840163 | MS.gene044843:CDS |
ACTTCAATATTTGCAAACCC+TGG | 0.607854 | 7.2:+72841789 | MS.gene044843:CDS |
GATTCTATTTCAAATATTAG+GGG | 0.624169 | 7.2:+72842423 | MS.gene044843:CDS |
ACCCTGGCATATCAAACAAG+AGG | 0.650777 | 7.2:+72841805 | MS.gene044843:CDS |
GGTGCAAATAACAATGAAAG+GGG | 0.659516 | 7.2:+72842327 | MS.gene044843:CDS |
AGATGTTGAAGAGAAAGGAA+TGG | 0.660542 | 7.2:+72841657 | MS.gene044843:CDS |
GTTGCGGAGAATAATGGCCA+TGG | 0.690083 | 7.2:+72841964 | MS.gene044843:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAAATATTTTTCTTATGAA+AGG | + | chr7.2:72840298-72840317 | MS.gene044843:intron | 10.0% |
!!! | ATATTATTTTAAAATGATAG+TGG | - | chr7.2:72840508-72840527 | None:intergenic | 10.0% |
!!! | TTTTAATAATAGTACTTAAT+AGG | - | chr7.2:72840998-72841017 | None:intergenic | 10.0% |
!! | AATATTAAAATTGGGATAAT+AGG | - | chr7.2:72841217-72841236 | None:intergenic | 15.0% |
!! | AGTGTGTATAATATTAAAAT+TGG | - | chr7.2:72841226-72841245 | None:intergenic | 15.0% |
!! | GTGTGTATAATATTAAAATT+GGG | - | chr7.2:72841225-72841244 | None:intergenic | 15.0% |
!!! | TATTTTAATAAAAAGTGATG+TGG | - | chr7.2:72840893-72840912 | None:intergenic | 15.0% |
!! | AATTTGTAATTCAACAATGT+AGG | - | chr7.2:72841193-72841212 | None:intergenic | 20.0% |
!! | AGATATTTGGAAATATGTTA+TGG | + | chr7.2:72840042-72840061 | MS.gene044843:CDS | 20.0% |
!! | AGTGTTAAAAATTCAAACTT+TGG | + | chr7.2:72842168-72842187 | MS.gene044843:CDS | 20.0% |
!! | GATTCTATTTCAAATATTAG+GGG | + | chr7.2:72842423-72842442 | MS.gene044843:CDS | 20.0% |
!! | GGATTCTATTTCAAATATTA+GGG | + | chr7.2:72842422-72842441 | MS.gene044843:CDS | 20.0% |
!! | GGCTATTAAATAATATTTGT+GGG | + | chr7.2:72840924-72840943 | MS.gene044843:intron | 20.0% |
!! | TACACATATTACTTACAATA+TGG | - | chr7.2:72840348-72840367 | None:intergenic | 20.0% |
!! | TGGATTCTATTTCAAATATT+AGG | + | chr7.2:72842421-72842440 | MS.gene044843:CDS | 20.0% |
!! | TGGCTATTAAATAATATTTG+TGG | + | chr7.2:72840923-72840942 | MS.gene044843:intron | 20.0% |
!!! | AATTTTTAACACTGTGATTT+TGG | - | chr7.2:72842161-72842180 | None:intergenic | 20.0% |
!!! | ATATTAGTGATCATTTTACA+TGG | + | chr7.2:72840524-72840543 | MS.gene044843:intron | 20.0% |
!!! | ATTTTACAACCATATCATAT+GGG | + | chr7.2:72840549-72840568 | MS.gene044843:intron | 20.0% |
!!! | TCTTTTGTGAATGAAAATTT+TGG | + | chr7.2:72842375-72842394 | MS.gene044843:CDS | 20.0% |
!!! | TTAACAAGGGATTTTAAATT+TGG | + | chr7.2:72842123-72842142 | MS.gene044843:CDS | 20.0% |
!!! | TTTAATTTTGTAACCTCAAA+GGG | - | chr7.2:72840588-72840607 | None:intergenic | 20.0% |
! | AGATATACGACAAAAATTAG+AGG | - | chr7.2:72841575-72841594 | None:intergenic | 25.0% |
! | CAATTCCCTTATATACAAAA+AGG | + | chr7.2:72841880-72841899 | MS.gene044843:CDS | 25.0% |
! | CAGACAATACTATAGAAAAA+TGG | - | chr7.2:72840397-72840416 | None:intergenic | 25.0% |
! | TAAATTAGATGGAAATGTTG+TGG | + | chr7.2:72842524-72842543 | MS.gene044843:CDS | 25.0% |
! | TATTGTGGAAAAAAAATTGG+TGG | + | chr7.2:72840819-72840838 | MS.gene044843:intron | 25.0% |
! | TCCTATTGTGGAAAAAAAAT+TGG | + | chr7.2:72840816-72840835 | MS.gene044843:intron | 25.0% |
! | TCTATATGATGAAAAACTAG+TGG | - | chr7.2:72842064-72842083 | None:intergenic | 25.0% |
! | TTTCCATCTAATTTATGTTG+AGG | - | chr7.2:72842519-72842538 | None:intergenic | 25.0% |
! | TTTCCTCAACATAAATTAGA+TGG | + | chr7.2:72842513-72842532 | MS.gene044843:CDS | 25.0% |
!! | ATTTAAGACCTCAAAATTGA+GGG | + | chr7.2:72841052-72841071 | MS.gene044843:intron | 25.0% |
!! | CATTTTACAACCATATCATA+TGG | + | chr7.2:72840548-72840567 | MS.gene044843:intron | 25.0% |
!! | CCAATCCTTTTTGTATATAA+GGG | - | chr7.2:72841888-72841907 | None:intergenic | 25.0% |
!! | CTTTTTGTATATAAGGGAAT+TGG | - | chr7.2:72841882-72841901 | None:intergenic | 25.0% |
!! | GAAAATGAGCAAAAGTATAA+TGG | + | chr7.2:72842546-72842565 | MS.gene044843:CDS | 25.0% |
!! | TTAAGAAACAAAAGCTTGTT+TGG | + | chr7.2:72840206-72840225 | MS.gene044843:CDS | 25.0% |
!! | TTCTTCAAGTTTCTTAACAA+GGG | + | chr7.2:72842110-72842129 | MS.gene044843:CDS | 25.0% |
!! | TTTTTGCTAGAAAAAATGGA+AGG | - | chr7.2:72842020-72842039 | None:intergenic | 25.0% |
!!! | AACTATGAACAATGGATTAA+GGG | + | chr7.2:72842299-72842318 | MS.gene044843:CDS | 25.0% |
!!! | ACCAATTTTTTTTCCACAAT+AGG | - | chr7.2:72840820-72840839 | None:intergenic | 25.0% |
!!! | ACTAGTTTTTCATCATATAG+AGG | + | chr7.2:72842063-72842082 | MS.gene044843:CDS | 25.0% |
!!! | ATGATCTCCAGAATTTTTTT+TGG | - | chr7.2:72841428-72841447 | None:intergenic | 25.0% |
!!! | GAGTTTTTTGCTAGAAAAAA+TGG | - | chr7.2:72842024-72842043 | None:intergenic | 25.0% |
!!! | GTTTAATTTTGTAACCTCAA+AGG | - | chr7.2:72840589-72840608 | None:intergenic | 25.0% |
!!! | TCAATTTTGAGGTCTTAAAT+GGG | - | chr7.2:72841052-72841071 | None:intergenic | 25.0% |
!!! | TGTGAATGAAAATTTTGGTT+TGG | + | chr7.2:72842380-72842399 | MS.gene044843:CDS | 25.0% |
AACACCACTATCATTGTTTA+TGG | + | chr7.2:72840632-72840651 | MS.gene044843:intron | 30.0% | |
AATAGAGATCCTCTAACAAA+GGG | - | chr7.2:72840961-72840980 | None:intergenic | 30.0% | |
ACACCACTATCATTGTTTAT+GGG | + | chr7.2:72840633-72840652 | MS.gene044843:intron | 30.0% | |
ACATCAGAAGTAAACTTATG+AGG | - | chr7.2:72842219-72842238 | None:intergenic | 30.0% | |
ACTTACTTTCCAATCCAATT+TGG | - | chr7.2:72840270-72840289 | None:intergenic | 30.0% | |
AGTTCAAATCCCATATGATA+TGG | - | chr7.2:72840561-72840580 | None:intergenic | 30.0% | |
ATTAGGTACCATGTCTTAAA+TGG | - | chr7.2:72840790-72840809 | None:intergenic | 30.0% | |
CAAGTATGTTGCATTAATAG+CGG | - | chr7.2:72840446-72840465 | None:intergenic | 30.0% | |
CCCTTATATACAAAAAGGAT+TGG | + | chr7.2:72841885-72841904 | MS.gene044843:CDS | 30.0% | |
CTATTTCAAATATTAGGGGA+GGG | + | chr7.2:72842427-72842446 | MS.gene044843:CDS | 30.0% | |
CTGAAGACTTCAAAGATATT+TGG | + | chr7.2:72840029-72840048 | MS.gene044843:CDS | 30.0% | |
GTTTGCAAATATTGAAGTGT+TGG | - | chr7.2:72841787-72841806 | None:intergenic | 30.0% | |
TACTTCTTCCAACCATAAAT+CGG | + | chr7.2:72840366-72840385 | MS.gene044843:intron | 30.0% | |
TCTATTTCAAATATTAGGGG+AGG | + | chr7.2:72842426-72842445 | MS.gene044843:CDS | 30.0% | |
TGCTATTAACCAAATTGGAT+TGG | + | chr7.2:72840258-72840277 | MS.gene044843:CDS | 30.0% | |
TGGTGCAAATAACAATGAAA+GGG | + | chr7.2:72842326-72842345 | MS.gene044843:CDS | 30.0% | |
TTATTCAGCTGAATTCCAAA+AGG | - | chr7.2:72842255-72842274 | None:intergenic | 30.0% | |
! | AGAAACATTTTGTGGAGATA+AGG | - | chr7.2:72840235-72840254 | None:intergenic | 30.0% |
! | ATATTTTCTCCCTAATTCAG+AGG | + | chr7.2:72841397-72841416 | MS.gene044843:intron | 30.0% |
! | CATTTAAGACCTCAAAATTG+AGG | + | chr7.2:72841051-72841070 | MS.gene044843:intron | 30.0% |
! | CTTCTTCAAGTTTCTTAACA+AGG | + | chr7.2:72842109-72842128 | MS.gene044843:CDS | 30.0% |
! | GCCAATCCTTTTTGTATATA+AGG | - | chr7.2:72841889-72841908 | None:intergenic | 30.0% |
! | GTAAGAAACGATAATCCTTT+TGG | + | chr7.2:72842237-72842256 | MS.gene044843:CDS | 30.0% |
! | TAATTACAGAGCATCTACAA+TGG | + | chr7.2:72840753-72840772 | MS.gene044843:intron | 30.0% |
! | TTTAAGACATGGTACCTAAT+AGG | + | chr7.2:72840790-72840809 | MS.gene044843:intron | 30.0% |
! | TTTGGAATTCAGCTGAATAA+TGG | + | chr7.2:72842255-72842274 | MS.gene044843:CDS | 30.0% |
!! | GAACTATGAACAATGGATTA+AGG | + | chr7.2:72842298-72842317 | MS.gene044843:CDS | 30.0% |
!!! | CTCAATTTTGAGGTCTTAAA+TGG | - | chr7.2:72841053-72841072 | None:intergenic | 30.0% |
!!! | GAAAATTTTGGTTTGGTTCA+AGG | + | chr7.2:72842387-72842406 | MS.gene044843:CDS | 30.0% |
AAAAAGTGATGTGTCCATGT+GGG | + | chr7.2:72841025-72841044 | MS.gene044843:intron | 35.0% | |
AAATGTAGCAAGTCACTTAC+AGG | + | chr7.2:72841472-72841491 | MS.gene044843:CDS | 35.0% | |
AAGCCCATAAACAATGATAG+TGG | - | chr7.2:72840639-72840658 | None:intergenic | 35.0% | |
AATTGGTCAACATGATGTGT+TGG | - | chr7.2:72841865-72841884 | None:intergenic | 35.0% | |
ACTTCAATATTTGCAAACCC+TGG | + | chr7.2:72841789-72841808 | MS.gene044843:CDS | 35.0% | |
AGAAAGAGTAAAGAATGCCA+AGG | + | chr7.2:72840163-72840182 | MS.gene044843:CDS | 35.0% | |
AGATGTTGAAGAGAAAGGAA+TGG | + | chr7.2:72841657-72841676 | MS.gene044843:CDS | 35.0% | |
ATCTCAAAGACGCTAGAAAA+TGG | + | chr7.2:72839974-72839993 | MS.gene044843:CDS | 35.0% | |
ATGTGGACCCATTTAAGAAT+GGG | - | chr7.2:72840876-72840895 | None:intergenic | 35.0% | |
ATTATTCTCCGCAACAACAT+CGG | - | chr7.2:72841959-72841978 | None:intergenic | 35.0% | |
ATTTCTCTGATCACAGAACT+TGG | - | chr7.2:72841733-72841752 | None:intergenic | 35.0% | |
ATTTGAACTTCTTCCCTTTG+AGG | + | chr7.2:72840572-72840591 | MS.gene044843:intron | 35.0% | |
CAACATGATGTGTTGGAAAT+TGG | - | chr7.2:72841858-72841877 | None:intergenic | 35.0% | |
CAATAGAGATCCTCTAACAA+AGG | - | chr7.2:72840962-72840981 | None:intergenic | 35.0% | |
CTCTAACAAAGGGTCTAATA+GGG | - | chr7.2:72840951-72840970 | None:intergenic | 35.0% | |
CTGGTGCAAATAACAATGAA+AGG | + | chr7.2:72842325-72842344 | MS.gene044843:CDS | 35.0% | |
CTTTGTTAGAGGATCTCTAT+TGG | + | chr7.2:72840960-72840979 | MS.gene044843:intron | 35.0% | |
GCAAAAAACTCATTCCATGA+TGG | + | chr7.2:72842033-72842052 | MS.gene044843:CDS | 35.0% | |
GCAGGATCAGTTAATAATGA+AGG | + | chr7.2:72842468-72842487 | MS.gene044843:CDS | 35.0% | |
GGAATTGGAACTATGAACAA+TGG | + | chr7.2:72842291-72842310 | MS.gene044843:CDS | 35.0% | |
GGATCTTTGATAAGCACTAA+TGG | + | chr7.2:72842189-72842208 | MS.gene044843:CDS | 35.0% | |
GGCTGTTCCAAAAAAAATTC+TGG | + | chr7.2:72841418-72841437 | MS.gene044843:CDS | 35.0% | |
GGTGCAAATAACAATGAAAG+GGG | + | chr7.2:72842327-72842346 | MS.gene044843:CDS | 35.0% | |
GTGTTGGAAATTGGTTGAAA+TGG | - | chr7.2:72841849-72841868 | None:intergenic | 35.0% | |
TAAAAAGTGATGTGTCCATG+TGG | + | chr7.2:72841024-72841043 | MS.gene044843:intron | 35.0% | |
TAAGACCCCCATTCTTAAAT+GGG | + | chr7.2:72840866-72840885 | MS.gene044843:intron | 35.0% | |
TACCCCTAAAATTAAGCTGT+TGG | + | chr7.2:72841260-72841279 | MS.gene044843:intron | 35.0% | |
TAGGCTTGGAAAATCAAAGT+TGG | + | chr7.2:72841930-72841949 | MS.gene044843:CDS | 35.0% | |
TATCCCTTTCAAACTCAAGT+GGG | + | chr7.2:72841097-72841116 | MS.gene044843:intron | 35.0% | |
TCATCATATAGAGGTGAACA+AGG | + | chr7.2:72842072-72842091 | MS.gene044843:CDS | 35.0% | |
TTAAGACCCCCATTCTTAAA+TGG | + | chr7.2:72840865-72840884 | MS.gene044843:intron | 35.0% | |
TTGAAGTCTTCAGCACAAAA+AGG | - | chr7.2:72840022-72840041 | None:intergenic | 35.0% | |
! | AATAATGGAGCAGAAATGGT+TGG | + | chr7.2:72842270-72842289 | MS.gene044843:CDS | 35.0% |
! | AGAGCCAACAGCTTAATTTT+AGG | - | chr7.2:72841267-72841286 | None:intergenic | 35.0% |
! | AGCCAACAGCTTAATTTTAG+GGG | - | chr7.2:72841265-72841284 | None:intergenic | 35.0% |
! | CAATGCTTCTTTTCGTTCTT+AGG | - | chr7.2:72840139-72840158 | None:intergenic | 35.0% |
! | CTAAGATCAAGTTTTGCATC+AGG | + | chr7.2:72841703-72841722 | MS.gene044843:CDS | 35.0% |
! | GAGCCAACAGCTTAATTTTA+GGG | - | chr7.2:72841266-72841285 | None:intergenic | 35.0% |
! | TAGCAAGCAGAAACATTTTG+TGG | - | chr7.2:72840243-72840262 | None:intergenic | 35.0% |
! | TTCAAGATTTGGAACAGGTT+AGG | + | chr7.2:72841911-72841930 | MS.gene044843:CDS | 35.0% |
!! | AGCGTCTTTGAGATTAAACT+TGG | - | chr7.2:72839968-72839987 | None:intergenic | 35.0% |
!! | CTGCTTGCTATTAACCAAAT+TGG | + | chr7.2:72840253-72840272 | MS.gene044843:CDS | 35.0% |
!!! | AATTTTGGTTTGGTTCAAGG+AGG | + | chr7.2:72842390-72842409 | MS.gene044843:CDS | 35.0% |
!!! | ATTTTGGTTTGGTTCAAGGA+GGG | + | chr7.2:72842391-72842410 | MS.gene044843:CDS | 35.0% |
AAAATTGAGGGTCTCCATTG+TGG | + | chr7.2:72841064-72841083 | MS.gene044843:intron | 40.0% | |
ACACCCACTTGAGTTTGAAA+GGG | - | chr7.2:72841103-72841122 | None:intergenic | 40.0% | |
ATAATGGCCATGGTCAAAAC+AGG | + | chr7.2:72841974-72841993 | MS.gene044843:CDS | 40.0% | |
CCACAATAGGAGAACCTATT+AGG | - | chr7.2:72840807-72840826 | None:intergenic | 40.0% | |
CCTAATAGGTTCTCCTATTG+TGG | + | chr7.2:72840804-72840823 | MS.gene044843:intron | 40.0% | |
CCTATTAGACCCTTTGTTAG+AGG | + | chr7.2:72840949-72840968 | MS.gene044843:intron | 40.0% | |
CCTCTAACAAAGGGTCTAAT+AGG | - | chr7.2:72840952-72840971 | None:intergenic | 40.0% | |
CTTGAATATCTCTCTCTCCT+TGG | - | chr7.2:72840183-72840202 | None:intergenic | 40.0% | |
GATGTGGACCCATTTAAGAA+TGG | - | chr7.2:72840877-72840896 | None:intergenic | 40.0% | |
GATGTTGTTGCGGAGAATAA+TGG | + | chr7.2:72841958-72841977 | MS.gene044843:CDS | 40.0% | |
GTATCCCTTTCAAACTCAAG+TGG | + | chr7.2:72841096-72841115 | MS.gene044843:intron | 40.0% | |
GTTGAAGAGAAAGGAATGGT+TGG | + | chr7.2:72841661-72841680 | MS.gene044843:CDS | 40.0% | |
TAGAGGTGAACAAGGATTGA+TGG | + | chr7.2:72842080-72842099 | MS.gene044843:CDS | 40.0% | |
TGTGGACCCATTTAAGAATG+GGG | - | chr7.2:72840875-72840894 | None:intergenic | 40.0% | |
TGTTTGTGCACTAGCTAACT+GGG | - | chr7.2:72840616-72840635 | None:intergenic | 40.0% | |
TTAGAGGATCTCTATTGGAG+TGG | + | chr7.2:72840965-72840984 | MS.gene044843:intron | 40.0% | |
TTGGAACAGCCTCTGAATTA+GGG | - | chr7.2:72841409-72841428 | None:intergenic | 40.0% | |
! | AAAATGGTGCAGCCGATTTA+TGG | - | chr7.2:72840381-72840400 | None:intergenic | 40.0% |
! | AATGGAGACCCTCAATTTTG+AGG | - | chr7.2:72841063-72841082 | None:intergenic | 40.0% |
! | ACATTTTCTCTGGTCAGGTT+TGG | - | chr7.2:72841458-72841477 | None:intergenic | 40.0% |
! | ACCTCTTGTTTGATATGCCA+GGG | - | chr7.2:72841809-72841828 | None:intergenic | 40.0% |
! | GCTGAATAATGGAGCAGAAA+TGG | + | chr7.2:72842266-72842285 | MS.gene044843:CDS | 40.0% |
! | GGTCTTCACCATTTAAGACA+TGG | + | chr7.2:72840779-72840798 | MS.gene044843:intron | 40.0% |
! | TGGTGGTCTTAAAAGATCCA+AGG | + | chr7.2:72840836-72840855 | MS.gene044843:intron | 40.0% |
! | TTGCTACATTTTCTCTGGTC+AGG | - | chr7.2:72841463-72841482 | None:intergenic | 40.0% |
! | TTTGGAACAGCCTCTGAATT+AGG | - | chr7.2:72841410-72841429 | None:intergenic | 40.0% |
!! | AACAATGGATTAAGGGCTTC+TGG | + | chr7.2:72842306-72842325 | MS.gene044843:CDS | 40.0% |
!! | AGGATTGGCTCTTCAAGATT+TGG | + | chr7.2:72841900-72841919 | MS.gene044843:CDS | 40.0% |
!! | GATACTAAGAGCATCCACAA+TGG | - | chr7.2:72841081-72841100 | None:intergenic | 40.0% |
!!! | GTGACTTGCTACATTTTCTC+TGG | - | chr7.2:72841468-72841487 | None:intergenic | 40.0% |
!!! | TTCCAAACCTGTTTTGACCA+TGG | - | chr7.2:72841984-72842003 | None:intergenic | 40.0% |
ACCCTGGCATATCAAACAAG+AGG | + | chr7.2:72841805-72841824 | MS.gene044843:CDS | 45.0% | |
CACACCCACTTGAGTTTGAA+AGG | - | chr7.2:72841104-72841123 | None:intergenic | 45.0% | |
CTGCGAGATGTTGAAGAGAA+AGG | + | chr7.2:72841652-72841671 | MS.gene044843:CDS | 45.0% | |
GAAGAGAAAGGAATGGTTGG+AGG | + | chr7.2:72841664-72841683 | MS.gene044843:CDS | 45.0% | |
GGAGCAGAAATGGTTGGAAT+TGG | + | chr7.2:72842276-72842295 | MS.gene044843:CDS | 45.0% | |
GTGGACCCATTTAAGAATGG+GGG | - | chr7.2:72840874-72840893 | None:intergenic | 45.0% | |
GTGTTTGTGCACTAGCTAAC+TGG | - | chr7.2:72840617-72840636 | None:intergenic | 45.0% | |
TCAAATATTAGGGGAGGGAG+TGG | + | chr7.2:72842432-72842451 | MS.gene044843:CDS | 45.0% | |
! | ACAGAGCATCTACAATGGTG+AGG | + | chr7.2:72840758-72840777 | MS.gene044843:intron | 45.0% |
! | CACCTCTTGTTTGATATGCC+AGG | - | chr7.2:72841810-72841829 | None:intergenic | 45.0% |
! | GATTTGGAACAGGTTAGGCT+TGG | + | chr7.2:72841916-72841935 | MS.gene044843:CDS | 45.0% |
! | GGCTCTTCAAGATTTGGAAC+AGG | + | chr7.2:72841906-72841925 | MS.gene044843:CDS | 45.0% |
!! | AACTAGTGGAAGCACCATCA+TGG | - | chr7.2:72842050-72842069 | None:intergenic | 45.0% |
!! | AGTGGAAGAGAGTTTCTAGC+AGG | + | chr7.2:72842450-72842469 | MS.gene044843:CDS | 45.0% |
!!! | TATTAAAATAATAATTTTCA+TGG | + | chr7.2:72840903-72840922 | MS.gene044843:intron | 5.0% |
GGCCATGGTCAAAACAGGTT+TGG | + | chr7.2:72841979-72841998 | MS.gene044843:CDS | 50.0% | |
GGGGGTCTTAAGTTAGACCT+TGG | - | chr7.2:72840856-72840875 | None:intergenic | 50.0% | |
GGTCTTAAATGGGTCCCACA+TGG | - | chr7.2:72841042-72841061 | None:intergenic | 50.0% | |
GTTGCGGAGAATAATGGCCA+TGG | + | chr7.2:72841964-72841983 | MS.gene044843:CDS | 50.0% | |
GTTGGAAGCCGATGTTGTTG+CGG | + | chr7.2:72841948-72841967 | MS.gene044843:CDS | 50.0% | |
! | GGTTTGGTTCAAGGAGGGTT+TGG | + | chr7.2:72842396-72842415 | MS.gene044843:CDS | 50.0% |
! | TGGTGCAGCCGATTTATGGT+TGG | - | chr7.2:72840377-72840396 | None:intergenic | 50.0% |
! | GGTTCAAGGAGGGTTTGGTC+TGG | + | chr7.2:72842401-72842420 | MS.gene044843:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 72839947 | 72842587 | 72839947 | ID=MS.gene044843 |
chr7.2 | mRNA | 72839947 | 72842587 | 72839947 | ID=MS.gene044843.t1;Parent=MS.gene044843 |
chr7.2 | exon | 72839947 | 72840283 | 72839947 | ID=MS.gene044843.t1.exon1;Parent=MS.gene044843.t1 |
chr7.2 | CDS | 72839947 | 72840283 | 72839947 | ID=cds.MS.gene044843.t1;Parent=MS.gene044843.t1 |
chr7.2 | exon | 72841417 | 72841493 | 72841417 | ID=MS.gene044843.t1.exon2;Parent=MS.gene044843.t1 |
chr7.2 | CDS | 72841417 | 72841493 | 72841417 | ID=cds.MS.gene044843.t1;Parent=MS.gene044843.t1 |
chr7.2 | exon | 72841637 | 72842587 | 72841637 | ID=MS.gene044843.t1.exon3;Parent=MS.gene044843.t1 |
chr7.2 | CDS | 72841637 | 72842587 | 72841637 | ID=cds.MS.gene044843.t1;Parent=MS.gene044843.t1 |
Gene Sequence |
Protein sequence |